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authorQuincey Koziol <koziol@hdfgroup.org>2003-04-03 13:58:53 (GMT)
committerQuincey Koziol <koziol@hdfgroup.org>2003-04-03 13:58:53 (GMT)
commit7e2e0f164d6d19694adef92c7b76a7772df174c0 (patch)
tree523a72811ed1fb75d4e6e9d99d9b890d95923fb1 /test
parent495a611f76de98e2c95b00fc9aca0478028f6f25 (diff)
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[svn-r6582] Purpose:
Code cleanup Description: Updated copyright. Removed szip-specific testing in favor of standard testing, now that bugs in the szip filter are fixed. Updated to latest version of H5Pset_szip API Solution: Platforms tested: FreeBSD 4.8 (sleipnir) IRIX64 6.5 (modi4) w/parallel Misc. update:
Diffstat (limited to 'test')
-rw-r--r--test/dsets.c397
1 files changed, 46 insertions, 351 deletions
diff --git a/test/dsets.c b/test/dsets.c
index b0317d5..32f25e4 100644
--- a/test/dsets.c
+++ b/test/dsets.c
@@ -1,7 +1,18 @@
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by the Board of Trustees of the University of Illinois. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the files COPYING and Copyright.html. COPYING can be found at the root *
+ * of the source code distribution tree; Copyright.html can be found at the *
+ * root level of an installed copy of the electronic HDF5 document set and *
+ * is linked from the top-level documents page. It can also be found at *
+ * http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
+ * access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
/*
- * Copyright (C) 1997 NCSA
- * All rights reserved.
- *
* Programmer: Robb Matzke <matzke@llnl.gov>
* Tuesday, December 9, 1997
*
@@ -9,7 +20,6 @@
*/
#include "h5test.h"
-#include "H5Zprivate.h" /* Filter functions */
const char *FILENAME[] = {
"dataset",
@@ -20,6 +30,7 @@ const char *FILENAME[] = {
#define FILE_DEFLATE_NAME "deflate.h5"
+/* Dataset names for testing filters */
#define DSET_DEFAULT_NAME "default"
#define DSET_CHUNKED_NAME "chunked"
#define DSET_COMPACT_NAME "compact"
@@ -41,10 +52,13 @@ const char *FILENAME[] = {
#define DSET_MISSING_NAME "missing"
#define DSET_ONEBYTE_SHUF_NAME "onebyte_shuffle"
-#define USER_BLOCK 512
+#define USER_BLOCK 1024
+
+/* Temporary filter IDs used for testing */
#define H5Z_BOGUS 305
#define H5Z_CORRUPT 306
+/* Flags for testing filters */
#define DISABLE_FLETCHER32 0
#define ENABLE_FLETCHER32 1
#define DATA_CORRUPTED 1
@@ -768,8 +782,8 @@ test_filter_internal(hid_t fid, const char *name, hid_t dcpl, int if_fletcher32,
* might as well test all we can!
*/
if ((dxpl = H5Pcreate (H5P_DATASET_XFER))<0) goto error;
- tconv_buf = malloc (80000);
- if (H5Pset_buffer (dxpl, 80000, tconv_buf, NULL)<0) goto error;
+ tconv_buf = malloc (1000);
+ if (H5Pset_buffer (dxpl, 1000, tconv_buf, NULL)<0) goto error;
if (if_fletcher32==DISABLE_FLETCHER32) {
if(H5Pset_edc_check(dxpl, H5Z_DISABLE_EDC)<0)
goto error;
@@ -818,13 +832,10 @@ test_filter_internal(hid_t fid, const char *name, hid_t dcpl, int if_fletcher32,
}
}
- if (H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, points)<0){
+ if (H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, points)<0)
goto error;
- }
- if((*dset_size=H5Dget_storage_size(dataset))==0) {
- goto error;
- }
+ if((*dset_size=H5Dget_storage_size(dataset))==0) goto error;
PASSED();
@@ -910,7 +921,6 @@ test_filter_internal(hid_t fid, const char *name, hid_t dcpl, int if_fletcher32,
if(status>=0) goto error;
} else {
/* Read the dataset back and check it */
- fflush(stdout);
if (H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, check)<0)
goto error;
@@ -1057,331 +1067,6 @@ error:
return -1;
}
-/*-------------------------------------------------------------------------
- * Function: test_filter_internal_szip
- *
- * Purpose: Tests dataset compression. If compression is requested when
- * it hasn't been compiled into the library (such as when
- * updating an existing compressed dataset) then data is sent to
- * the file uncompressed but no errors are returned.
- *
- * Return: Success: 0
- * Failure: -1
- *
- * Programmer: Robb Matzke
- * Wednesday, April 15, 1998
- *
- * Modifications:
- * Moved out of main test_compression routine
- * Quincey Koziol, November 14, 2002
- *
- *-------------------------------------------------------------------------
- */
-static herr_t
-test_filter_internal_szip(hid_t fid, const char *name, hid_t dcpl, int if_fletcher32,
- int corrupted, hsize_t *dset_size)
-{
- hid_t dataset; /* Dataset ID */
- hid_t dxpl; /* Dataset xfer property list ID */
- hid_t sid; /* Dataspace ID */
- const hsize_t size[2] = {100, 200}; /* Dataspace dimensions */
- const hssize_t hs_offset[2] = {7, 30}; /* Hyperslab offset */
- const hsize_t hs_size[2] = {4, 50}; /* Hyperslab size */
- void *tconv_buf = NULL; /* Temporary conversion buffer */
- hsize_t i, j, n; /* Local index variables */
- herr_t status; /* Error status */
-
- /* Create the data space */
- if ((sid = H5Screate_simple(2, size, NULL))<0) goto error;
-
- /*
- * Create a small conversion buffer to test strip mining. We
- * might as well test all we can!
- */
- if ((dxpl = H5Pcreate (H5P_DATASET_XFER))<0) goto error;
- tconv_buf = malloc (80000);
- if (H5Pset_buffer (dxpl, 80000, tconv_buf, NULL)<0) goto error;
- if (if_fletcher32==DISABLE_FLETCHER32) {
- if(H5Pset_edc_check(dxpl, H5Z_DISABLE_EDC)<0)
- goto error;
- if(H5Z_DISABLE_EDC != H5Pget_edc_check(dxpl))
- goto error;
- }
- TESTING(" filters (setup)");
-
- /* Create the dataset */
- if ((dataset = H5Dcreate(fid, name, H5T_NATIVE_INT, sid,
- dcpl))<0) goto error;
- PASSED();
-
- /*----------------------------------------------------------------------
- * STEP 1: Read uninitialized data. It should be zero.
- *----------------------------------------------------------------------
- */
- TESTING(" filters (uninitialized read)");
-
- if (H5Dread (dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, check)<0)
- goto error;
-
- for (i=0; i<size[0]; i++) {
- for (j=0; j<size[1]; j++) {
- if (0!=check[i][j]) {
- H5_FAILED();
- printf(" Read a non-zero value.\n");
- printf(" At index %lu,%lu\n",
- (unsigned long)i, (unsigned long)j);
- goto error;
- }
- }
- }
- PASSED();
-
- /*----------------------------------------------------------------------
- * STEP 2: Test filters by setting up a chunked dataset and writing
- * to it.
- *----------------------------------------------------------------------
- */
- TESTING(" filters (write)");
-
- for (i=n=0; i<size[0]; i++) {
- for (j=0; j<size[1]; j++) {
- points[i][j] = (int)(n++)%128;
- }
- }
-
- if (H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, points)<0){
- printf("writing dataset failed\n");
- goto error;
- }
-
- *dset_size = H5Dget_storage_size(dataset);
- PASSED();
-
- /*----------------------------------------------------------------------
- * STEP 3: Try to read the data we just wrote.
- *----------------------------------------------------------------------
- */
- TESTING(" filters (read)");
-
- /* Read the dataset back */
- if(corrupted) {
- /* Default behavior is failure when data is corrupted. */
- H5E_BEGIN_TRY {
- status=H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, check);
- } H5E_END_TRY;
- if(status>=0) goto error;
-
- /* Callback decides to continue inspite data is corrupted. */
- if(H5Pset_filter_callback(dxpl, filter_cb_cont, NULL)<0) goto error;
- if(H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, check)<0)
- goto error;
-
- /* Callback decides to fail when data is corrupted. */
- if(H5Pset_filter_callback(dxpl, filter_cb_fail, NULL)<0) goto error;
- H5E_BEGIN_TRY {
- status=H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, check);
- } H5E_END_TRY;
- if(status>=0) goto error;
- } else {
- if (H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, check)<0)
- goto error;
-
- /* Check that the values read are the same as the values written */
- for (i=0; i<size[0]; i++) {
- for (j=0; j<size[1]; j++) {
- if (points[i][j] != check[i][j]) {
- H5_FAILED();
- printf(" Read different values than written.\n");
- printf(" At index %lu,%lu\n",
- (unsigned long)i, (unsigned long)j);
- goto error;
- }
- }
- }
- }
-
- PASSED();
-
- /*----------------------------------------------------------------------
- * STEP 4: Write new data over the top of the old data. The new data is
- * random thus not very compressible, and will cause the chunks to move
- * around as they grow. We only change values for the left half of the
- * dataset although we rewrite the whole thing.
- *----------------------------------------------------------------------
- */
- TESTING(" filters (modify)");
-
- for (i=0; i<size[0]; i++) {
- for (j=0; j<size[1]/2; j++) {
- points[i][j] = rand ();
- }
- }
- if (H5Dwrite (dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, points)<0)
- goto error;
-
- if(corrupted) {
- /* Default behavior is failure when data is corrupted. */
- H5E_BEGIN_TRY {
- status=H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, check);
- } H5E_END_TRY;
- if(status>=0) goto error;
-
- /* Callback decides to continue inspite data is corrupted. */
- if(H5Pset_filter_callback(dxpl, filter_cb_cont, NULL)<0) goto error;
- if(H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, check)<0)
- goto error;
-
- /* Callback decides to fail when data is corrupted. */
- if(H5Pset_filter_callback(dxpl, filter_cb_fail, NULL)<0) goto error;
- H5E_BEGIN_TRY {
- status=H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, check);
- } H5E_END_TRY;
- if(status>=0) goto error;
- } else {
- /* Read the dataset back and check it */
- if (H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, check)<0)
- goto error;
-
- /* Check that the values read are the same as the values written */
- for (i=0; i<size[0]; i++) {
- for (j=0; j<size[1]; j++) {
- if (points[i][j] != check[i][j]) {
- H5_FAILED();
- printf(" Read different values than written.\n");
- printf(" At index %lu,%lu\n",
- (unsigned long)i, (unsigned long)j);
- goto error;
- }
- }
- }
- }
-
- /* if((*dset_size=H5Dget_storage_size(dataset))==0) goto error; */
- PASSED();
-
- /*----------------------------------------------------------------------
- * STEP 5: Close the dataset and then open it and read it again. This
- * insures that the filters message is picked up properly from the
- * object header.
- *----------------------------------------------------------------------
- */
- TESTING(" filters (re-open)");
-
- if (H5Dclose (dataset)<0) goto error;
- if ((dataset = H5Dopen (fid, name))<0) goto error;
-
- if(corrupted) {
- /* Default behavior is failure when data is corrupted. */
- H5E_BEGIN_TRY {
- status=H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, check);
- } H5E_END_TRY;
- if(status>=0) goto error;
-
- /* Callback decides to continue inspite data is corrupted. */
- if(H5Pset_filter_callback(dxpl, filter_cb_cont, NULL)<0) goto error;
- if(H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, check)<0)
- goto error;
-
- /* Callback decides to fail when data is corrupted. */
- if(H5Pset_filter_callback(dxpl, filter_cb_fail, NULL)<0) goto error;
- H5E_BEGIN_TRY {
- status=H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, check);
- } H5E_END_TRY;
- if(status>=0) goto error;
- } else {
- if (H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, check)<0)
- goto error;
-
- /* Check that the values read are the same as the values written */
- for (i=0; i<size[0]; i++) {
- for (j=0; j<size[1]; j++) {
- if (points[i][j] != check[i][j]) {
- H5_FAILED();
- printf(" Read different values than written.\n");
- printf(" At index %lu,%lu\n",
- (unsigned long)i, (unsigned long)j);
- goto error;
- }
- }
- }
- }
-
- PASSED();
-
-
- /*----------------------------------------------------------------------
- * STEP 6: Test partial I/O by writing to and then reading from a
- * hyperslab of the dataset. The hyperslab does not line up on chunk
- * boundaries (we know that case already works from above tests).
- *----------------------------------------------------------------------
- */
- TESTING(" filters (partial I/O)");
-
- for (i=0; i<hs_size[0]; i++) {
- for (j=0; j<hs_size[1]; j++) {
- points[hs_offset[0]+i][hs_offset[1]+j] = rand ();
- }
- }
- if (H5Sselect_hyperslab(sid, H5S_SELECT_SET, hs_offset, NULL, hs_size,
- NULL)<0) goto error;
- if (H5Dwrite (dataset, H5T_NATIVE_INT, sid, sid, dxpl, points)<0)
- goto error;
-
- if(corrupted) {
- /* Default behavior is failure when data is corrupted. */
- H5E_BEGIN_TRY {
- status=H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, check);
- } H5E_END_TRY;
- if(status>=0) goto error;
-
- /* Callback decides to continue inspite data is corrupted. */
- if(H5Pset_filter_callback(dxpl, filter_cb_cont, NULL)<0) goto error;
- if(H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, check)<0)
- goto error;
-
- /* Callback decides to fail when data is corrupted. */
- if(H5Pset_filter_callback(dxpl, filter_cb_fail, NULL)<0) goto error;
- H5E_BEGIN_TRY {
- status=H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, check);
- } H5E_END_TRY;
- if(status>=0) goto error;
- } else {
- if (H5Dread (dataset, H5T_NATIVE_INT, sid, sid, dxpl, check)<0)
- goto error;
-
- /* Check that the values read are the same as the values written */
- for (i=0; i<hs_size[0]; i++) {
- for (j=0; j<hs_size[1]; j++) {
- if (points[hs_offset[0]+i][hs_offset[1]+j] !=
- check[hs_offset[0]+i][hs_offset[1]+j]) {
- H5_FAILED();
- printf(" Read different values than written.\n");
- printf(" At index %lu,%lu\n",
- (unsigned long)(hs_offset[0]+i),
- (unsigned long)(hs_offset[1]+j));
- printf(" At original: %d\n",
- (int)points[hs_offset[0]+i][hs_offset[1]+j]);
- printf(" At returned: %d\n",
- (int)check[hs_offset[0]+i][hs_offset[1]+j]);
- goto error;
- }
- }
- }
- }
-
- PASSED();
-
- /* Clean up objects used for this test */
- if (H5Dclose (dataset)<0) goto error;
- if (H5Sclose (sid)<0) goto error;
- if (H5Pclose (dxpl)<0) goto error;
- free (tconv_buf);
-
- return(0);
-
-error:
- return -1;
-}
/*-------------------------------------------------------------------------
* Function: test_filters
@@ -1409,28 +1094,37 @@ test_filters(hid_t file)
{
hid_t dc; /* Dataset creation property list ID */
const hsize_t chunk_size[2] = {2, 25}; /* Chunk dimensions */
- const hsize_t chunk_szipsize[2] = {100,200};
hsize_t null_size; /* Size of dataset with null filter */
+
#ifdef H5_HAVE_FILTER_FLETCHER32
hsize_t fletcher32_size; /* Size of dataset with Fletcher32 checksum */
unsigned data_corrupt[3]; /* position and length of data to be corrupted */
#endif /* H5_HAVE_FILTER_FLETCHER32 */
+
#ifdef H5_HAVE_FILTER_DEFLATE
hsize_t deflate_size; /* Size of dataset with deflate filter */
#endif /* H5_HAVE_FILTER_DEFLATE */
#ifdef H5_HAVE_FILTER_SZIP
hsize_t szip_size; /* Size of dataset with szip filter */
- const unsigned cd_values[4] = {SZ_RAW_OPTION_MASK|SZ_NN_OPTION_MASK,32,4,200};
+ int szip_options_mask=H5_SZIP_RAW_OPTION_MASK|H5_SZIP_NN_OPTION_MASK;
+ int szip_bits_per_pixel=32;
+ int szip_pixels_per_block=4;
+ int szip_pixels_per_scanline=200;
#endif /* H5_HAVE_FILTER_SZIP */
+
#ifdef H5_HAVE_FILTER_SHUFFLE
hsize_t shuffle_size; /* Size of dataset with shuffle filter */
#endif /* H5_HAVE_FILTER_SHUFFLE */
-#if defined H5_HAVE_FILTER_DEFLATE | defined H5_HAVE_FILTER_SZIP && defined H5_HAVE_FILTER_SHUFFLE && defined H5_HAVE_FILTER_FLETCHER32
+
+#if (defined H5_HAVE_FILTER_DEFLATE | defined H5_HAVE_FILTER_SZIP) && defined H5_HAVE_FILTER_SHUFFLE && defined H5_HAVE_FILTER_FLETCHER32
hsize_t combo_size; /* Size of dataset with shuffle+deflate filter */
#endif /* H5_HAVE_FILTER_DEFLATE && H5_HAVE_FILTER_SHUFFLE && H5_HAVE_FILTER_FLETCHER32 */
- /* Test null I/O filter (by itself) */
+ /*----------------------------------------------------------
+ * STEP 0: Test null I/O filter by itself.
+ *----------------------------------------------------------
+ */
puts("Testing 'null' filter");
if((dc = H5Pcreate(H5P_DATASET_CREATE))<0) goto error;
if (H5Pset_chunk (dc, 2, chunk_size)<0) goto error;
@@ -1518,11 +1212,11 @@ test_filters(hid_t file)
#ifdef H5_HAVE_FILTER_SZIP
puts("Testing szip filter");
if((dc = H5Pcreate(H5P_DATASET_CREATE))<0) goto error;
- if (H5Pset_chunk (dc, 2, chunk_szipsize)<0) goto error;
+ if (H5Pset_chunk (dc, 2, chunk_size)<0) goto error;
- if (H5Pset_szip(dc, cd_values)<0) goto error;
+ if (H5Pset_szip(dc, szip_options_mask, szip_bits_per_pixel, szip_pixels_per_block, szip_pixels_per_scanline)<0) goto error;
- if(test_filter_internal_szip(file,DSET_SZIP_NAME,dc,DISABLE_FLETCHER32,DATA_NOT_CORRUPTED,&szip_size)<0) goto error;
+ if(test_filter_internal(file,DSET_SZIP_NAME,dc,DISABLE_FLETCHER32,DATA_NOT_CORRUPTED,&szip_size)<0) goto error;
if (H5Pclose (dc)<0) goto error;
#else /* H5_HAVE_FILTER_SZIP */
TESTING("szip filter");
@@ -1588,6 +1282,7 @@ test_filters(hid_t file)
SKIPPED();
puts("Deflate, shuffle, or Fletcher32 checksum filter not enabled");
#endif /* H5_HAVE_FILTER_DEFLATE && H5_HAVE_FILTER_SHUFFLE && H5_HAVE_FILTER_FLETCHER32 */
+
/*----------------------------------------------------------
* STEP 6: Test shuffle + szip + checksum in any order.
*----------------------------------------------------------
@@ -1596,24 +1291,24 @@ test_filters(hid_t file)
puts("Testing shuffle+szip+checksum filters(checksum first)");
if((dc = H5Pcreate(H5P_DATASET_CREATE))<0) goto error;
- if (H5Pset_chunk (dc, 2, chunk_szipsize)<0) goto error;
+ if (H5Pset_chunk (dc, 2, chunk_size)<0) goto error;
if (H5Pset_fletcher32 (dc)<0) goto error;
if (H5Pset_shuffle (dc, sizeof(int))<0) goto error;
- if (H5Pset_szip (dc, cd_values)<0) goto error;
+ if (H5Pset_szip(dc, szip_options_mask, szip_bits_per_pixel, szip_pixels_per_block, szip_pixels_per_scanline)<0) goto error;
- if(test_filter_internal_szip(file,DSET_SHUF_SZIP_FLET_NAME,dc,ENABLE_FLETCHER32,DATA_NOT_CORRUPTED,&combo_size)<0) goto error;
+ if(test_filter_internal(file,DSET_SHUF_SZIP_FLET_NAME,dc,ENABLE_FLETCHER32,DATA_NOT_CORRUPTED,&combo_size)<0) goto error;
/* Clean up objects used for this test */
if (H5Pclose (dc)<0) goto error;
puts("Testing shuffle+szip+checksum filters(checksum last)");
if((dc = H5Pcreate(H5P_DATASET_CREATE))<0) goto error;
- if (H5Pset_chunk (dc, 2, chunk_szipsize)<0) goto error;
+ if (H5Pset_chunk (dc, 2, chunk_size)<0) goto error;
if (H5Pset_shuffle (dc, sizeof(int))<0) goto error;
- if (H5Pset_szip (dc, cd_values)<0) goto error;
+ if (H5Pset_szip(dc, szip_options_mask, szip_bits_per_pixel, szip_pixels_per_block, szip_pixels_per_scanline)<0) goto error;
if (H5Pset_fletcher32 (dc)<0) goto error;
- if(test_filter_internal_szip(file,DSET_SHUF_SZIP_FLET_NAME_2,dc,ENABLE_FLETCHER32,DATA_NOT_CORRUPTED,&combo_size)<0) goto error;
+ if(test_filter_internal(file,DSET_SHUF_SZIP_FLET_NAME_2,dc,ENABLE_FLETCHER32,DATA_NOT_CORRUPTED,&combo_size)<0) goto error;
/* Clean up objects used for this test */
if (H5Pclose (dc)<0) goto error;