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authorJerome Soumagne <jsoumagne@hdfgroup.org>2019-07-16 16:15:43 (GMT)
committerJerome Soumagne <jsoumagne@hdfgroup.org>2019-10-08 20:19:21 (GMT)
commitdabdcf95593aa97185c83006f35a0849ea012450 (patch)
treed8e20aa27fb16271e9ef355694475ca2c4437ff5 /test
parente9570c198b7950dd7459cd005068d772b33c7fd4 (diff)
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Add new H5R API that abstracts object, region and attribute reference types
Also support references to external files Add new H5T_REF type and type conversion routines Support conversion from H5T_REF_OBJ/DSET_REG to H5T_REF Add H5Treclaim() API to reclaim memory of vlen/reference types Deprecate H5Dvlen_reclaim() Fix H5T_vlen_reclaim() and H5T_reclaim() to use private callback Add H5T_ref_reclaim() Move previous H5R APIs to H5Rdeprec.c Clean up H5Ocopy Separate H5O_copy_expand_ref() to H5Ocopy_ref() Add support for copying new reference types Clean up deprecated routines to go through VOL and same code path Fix return codes in existing trefer.c test Rename trefer.c to trefer_deprec.c trefer.c is for new references Add performance test for trefer Add additional obj_copy_ref test Make use of tokens and blobs to store references Skip blob encoding for object references Start adding new reference examples
Diffstat (limited to 'test')
-rw-r--r--test/CMakeLists.txt2
-rw-r--r--test/Makefile.am6
-rw-r--r--test/objcopy_ref.c1739
-rw-r--r--test/testhdf5.c3
-rw-r--r--test/testhdf5.h2
-rw-r--r--test/trefer.c2188
-rw-r--r--test/trefer_deprec.c1827
7 files changed, 5186 insertions, 581 deletions
diff --git a/test/CMakeLists.txt b/test/CMakeLists.txt
index 8184d7f..c7a945e 100644
--- a/test/CMakeLists.txt
+++ b/test/CMakeLists.txt
@@ -194,6 +194,7 @@ set (testhdf5_SOURCES
${HDF5_TEST_SOURCE_DIR}/tmeta.c
${HDF5_TEST_SOURCE_DIR}/tmisc.c
${HDF5_TEST_SOURCE_DIR}/trefer.c
+ ${HDF5_TEST_SOURCE_DIR}/trefer_deprec.c
${HDF5_TEST_SOURCE_DIR}/trefstr.c
${HDF5_TEST_SOURCE_DIR}/tselect.c
${HDF5_TEST_SOURCE_DIR}/tskiplist.c
@@ -250,6 +251,7 @@ set (H5_TESTS
external
external_env
efc
+ objcopy_ref
objcopy
links
unlink
diff --git a/test/Makefile.am b/test/Makefile.am
index a19079d..57080aa 100644
--- a/test/Makefile.am
+++ b/test/Makefile.am
@@ -59,7 +59,7 @@ TEST_PROG= testhdf5 \
stab gheap evict_on_close farray earray btree2 fheap \
pool accum hyperslab istore bittests dt_arith page_buffer \
dtypes dsets chunk_info cmpd_dset filter_fail extend direct_chunk \
- external efc objcopy links unlink twriteorder big mtime fillval mount \
+ external efc objcopy objcopy_ref links unlink twriteorder big mtime fillval mount \
flush1 flush2 app_ref enum set_extent ttsafe enc_dec_plist \
enc_dec_plist_cross_platform getname vfd ros3 s3comms hdfs ntypes \
dangle dtransform reserved cross_read freespace mf vds file_image \
@@ -190,7 +190,7 @@ CHECK_CLEANFILES+=accum.h5 cmpd_dset.h5 compact_dataset.h5 dataset.h5 dset_offse
stdio.h5 sec2.h5 dtypes[0-9].h5 dtypes1[0].h5 dt_arith[1-2].h5 tattr.h5 \
tselect.h5 mtime.h5 unlink.h5 unicode.h5 coord.h5 \
fillval_[0-9].h5 fillval.raw mount_[0-9].h5 testmeta.h5 ttime.h5 \
- trefer[1-3].h5 tvltypes.h5 tvlstr.h5 tvlstr2.h5 twriteorder.dat \
+ trefer[1-3].h5 trefer_*.h5 tvltypes.h5 tvlstr.h5 tvlstr2.h5 twriteorder.dat \
flush.h5 flush-swmr.h5 noflush.h5 noflush-swmr.h5 flush_extend.h5 \
flush_extend-swmr.h5 noflush_extend.h5 noflush_extend-swmr.h5 \
enum1.h5 titerate.h5 ttsafe.h5 tarray1.h5 tgenprop.h5 \
@@ -218,7 +218,7 @@ CHECK_CLEANFILES+=accum.h5 cmpd_dset.h5 compact_dataset.h5 dataset.h5 dset_offse
# Sources for testhdf5 executable
testhdf5_SOURCES=testhdf5.c tarray.c tattr.c tchecksum.c tconfig.c tfile.c \
tgenprop.c th5o.c th5s.c tcoords.c theap.c tid.c titerate.c tmeta.c tmisc.c \
- trefer.c trefstr.c tselect.c tskiplist.c tsohm.c ttime.c ttst.c tunicode.c \
+ trefer.c trefer_deprec.c trefstr.c tselect.c tskiplist.c tsohm.c ttime.c ttst.c tunicode.c \
tvlstr.c tvltypes.c
# Sources for Use Cases
diff --git a/test/objcopy_ref.c b/test/objcopy_ref.c
new file mode 100644
index 0000000..721a7c6
--- /dev/null
+++ b/test/objcopy_ref.c
@@ -0,0 +1,1739 @@
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group. *
+ * Copyright by the Board of Trustees of the University of Illinois. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the COPYING file, which can be found at the root of the source code *
+ * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. *
+ * If you do not have access to either file, you may request a copy from *
+ * help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+/*
+ * Programmer: Peter X. Cao
+ * May 01, 2005
+ *
+ * Purpose: Test H5Ocopy() for references.
+ */
+
+#include "testhdf5.h"
+
+#define H5F_FRIEND /*suppress error about including H5Fpkg */
+#define H5F_TESTING
+#include "H5Fpkg.h" /* File access */
+
+const char *FILENAME[] = {
+ "objcopy_ref_src",
+ "objcopy_ref_dst",
+ "objcopy_ref_ext",
+ "objcopy_ref_src2",
+ "verbound_ref_src",
+ "verbound_ref_dst",
+ NULL
+};
+
+/* Configuration, really a series of bit flags. Maximum value is all three
+ * bit flags enabled.
+ */
+#define CONFIG_SHARE_SRC 1
+#define CONFIG_SHARE_DST 2
+#define CONFIG_SRC_NEW_FORMAT 4
+#define CONFIG_DST_NEW_FORMAT 8
+#define CONFIG_DENSE 16
+#define MAX_CONFIGURATION 31
+
+#define NAME_DATATYPE_SIMPLE "H5T_NATIVE_INT"
+#define NAME_DATATYPE_SIMPLE2 "H5T_NATIVE_INT-2"
+#define NAME_DATATYPE_VL "vlen of int"
+#define NAME_DATATYPE_VL_VL "vlen of vlen of int"
+#define NAME_DATASET_SIMPLE "dataset_simple"
+#define NAME_DATASET_SIMPLE2 "dataset_simple_copy"
+#define NAME_DATASET_SIMPLE3 "dataset_simple_another_copy"
+#define NAME_DATASET_COMPOUND "dataset_compound"
+#define NAME_DATASET_CHUNKED "dataset_chunked"
+#define NAME_DATASET_CHUNKED_SINGLE "dataset_chunked_single"
+#define NAME_DATASET_CHUNKED2 "dataset_chunked2"
+#define NAME_DATASET_CHUNKED2_SINGLE "dataset_chunked2_single"
+#define NAME_DATASET_CHUNKED3 "dataset_chunked3"
+#define NAME_DATASET_CHUNKED3_SINGLE "dataset_chunked3_single"
+#define NAME_DATASET_CHUNKED4 "dataset_chunked4"
+#define NAME_DATASET_CHUNKED4_SINGLE "dataset_chunked4_single"
+#define NAME_DATASET_COMPACT "dataset_compact"
+#define NAME_DATASET_EXTERNAL "dataset_ext"
+#define NAME_DATASET_NAMED_DTYPE "dataset_named_dtype"
+#define NAME_DATASET_NAMED_DTYPE2 "dataset_named_dtype2"
+#define NAME_DATASET_MULTI_OHDR "dataset_multi_ohdr"
+#define NAME_DATASET_MULTI_OHDR2 "dataset_multi_ohdr2"
+#define NAME_DATASET_VL "dataset_vl"
+#define NAME_DATASET_VL2 "dataset_vl2"
+#define NAME_DATASET_VL_VL "dataset_vl_vl"
+#define NAME_DATASET_VL_VL2 "dataset_vl_vl2"
+#define NAME_DATASET_CMPD_VL "dataset_cmpd_vl"
+#define NAME_DATASET_SUB_SUB "/g0/g00/g000/dataset_simple"
+#define NAME_GROUP_UNCOPIED "/uncopied"
+#define NAME_GROUP_EMPTY "/empty"
+#define NAME_GROUP_TOP "/g0"
+#define NAME_GROUP_TOP2 "/g1"
+#define NAME_GROUP_TOP3 "/g2"
+#define NAME_GROUP_TOP4 "/g3"
+#define NAME_GROUP_SUB "/g0/g00"
+#define NAME_GROUP_SUB_2 "/g0/g01"
+#define NAME_GROUP_SUB_SUB "/g0/g00/g000"
+#define NAME_GROUP_SUB_SUB2 "g000"
+#define NAME_GROUP_DATASET "/g0/dataset_simple"
+#define NAME_GROUP_LINK "/g_links"
+#define NAME_GROUP_LINK2 "/g_links2"
+#define NAME_GROUP_LOOP "g_loop"
+#define NAME_GROUP_LOOP2 "g_loop2"
+#define NAME_GROUP_LOOP3 "g_loop3"
+#define NAME_GROUP_REF "ref_grp"
+#define NAME_LINK_DATASET "/g_links/dataset_simple"
+#define NAME_LINK_HARD "/g_links/hard_link_to_dataset_simple"
+#define NAME_LINK_SOFT "/g_links/soft_link_to_dataset_simple"
+#define NAME_LINK_SOFT2 "/g_links2/soft_link_to_dataset_simple"
+#define NAME_LINK_EXTERN "/g_links/external_link_to_dataset_simple"
+#define NAME_LINK_EXTERN2 "/g_links2/external_link_to_dataset_simple"
+#define NAME_LINK_SOFT_DANGLE "/g_links/soft_link_to_nowhere"
+#define NAME_LINK_SOFT_DANGLE2 "/g_links2/soft_link_to_nowhere"
+#define NAME_LINK_EXTERN_DANGLE "/g_links/external_link_to_nowhere"
+#define NAME_LINK_EXTERN_DANGLE2 "/g_links2/external_link_to_nowhere"
+#define NAME_OLD_FORMAT "/dset1"
+
+#define NAME_BUF_SIZE 1024
+#define ATTR_NAME_LEN 80
+#define DIM_SIZE_1 12
+#define DIM_SIZE_2 6
+#define MAX_DIM_SIZE_1 100
+#define MAX_DIM_SIZE_2 80
+#define CHUNK_SIZE_1 5 /* Not an even fraction of dimension sizes, so we test copying partial chunks */
+#define CHUNK_SIZE_2 5
+#define NUM_SUB_GROUPS 20
+#define NUM_WIDE_LOOP_GROUPS 10
+#define NUM_DATASETS 10
+
+unsigned num_attributes_g; /* Number of attributes created */
+
+/* Table containing object id and object name */
+/* (Used for detecting duplicate objects when comparing groups */
+static struct {
+ size_t nalloc; /* number of slots allocated */
+ size_t nobjs; /* number of objects */
+ haddr_t *obj; /* Addresses of objects seen */
+} idtab_g;
+
+/* Local function prototypes */
+static int
+compare_data(hid_t parent1, hid_t parent2, hid_t pid, hid_t tid, size_t nelmts,
+ const void *buf1, const void *buf2, hid_t obj_owner);
+static int
+compare_datasets(hid_t did, hid_t did2, hid_t pid, const void *wbuf);
+static int
+compare_groups(hid_t gid, hid_t gid2, hid_t pid, int depth, unsigned copy_flags);
+
+/*-------------------------------------------------------------------------
+ * Function: addr_insert
+ *
+ * Purpose: Add an address to the table.
+ *
+ * Return: void
+ *
+ * Programmer: Quincey Koziol
+ * Saturday, November 5, 2005
+ *
+ *-------------------------------------------------------------------------
+ */
+static void
+addr_insert(H5O_info_t *oi)
+{
+ size_t n;
+
+ /* Don't add it if the link count is 1 because such an object can only
+ * be encountered once. */
+ if(oi->rc < 2)
+ return;
+
+ /* Extend the table */
+ if(idtab_g.nobjs >= idtab_g.nalloc) {
+ idtab_g.nalloc = MAX(256, 2*idtab_g.nalloc);
+ idtab_g.obj = (haddr_t *)HDrealloc(idtab_g.obj, idtab_g.nalloc * sizeof(idtab_g.obj[0]));
+ } /* end if */
+
+ /* Insert the entry */
+ n = idtab_g.nobjs++;
+ idtab_g.obj[n] = oi->addr;
+} /* end addr_insert() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: addr_lookup
+ *
+ * Purpose: Check if address has already been encountered
+ *
+ * Return: Success: TRUE/FALSE
+ *
+ * Failure: (can't fail)
+ *
+ * Programmer: Quincey Koziol
+ * Saturday, November 5, 2005
+ *
+ *-------------------------------------------------------------------------
+ */
+static H5_ATTR_PURE hbool_t
+addr_lookup(H5O_info_t *oi)
+{
+ size_t n;
+
+ if(oi->rc < 2) return FALSE; /*only one link possible*/
+
+ for(n = 0; n < idtab_g.nobjs; n++)
+ if(H5F_addr_eq(idtab_g.obj[n], oi->addr))
+ return TRUE;
+
+ return FALSE;
+} /* end addr_lookup() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: addr_reset
+ *
+ * Purpose: Reset the address tracking data structures
+ *
+ * Return: void
+ *
+ * Programmer: Quincey Koziol
+ * Saturday, November 5, 2005
+ *
+ *-------------------------------------------------------------------------
+ */
+static void
+addr_reset(void)
+{
+ if(idtab_g.obj)
+ HDfree(idtab_g.obj);
+ idtab_g.obj = NULL;
+ idtab_g.nalloc = idtab_g.nobjs = 0;
+} /* end addr_reset() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: attach_ref_attr
+ *
+ * Purpose: Create an attribute with object references
+ *
+ * Return: Non-negative on success/Negative on failure
+ *
+ *-------------------------------------------------------------------------
+ */
+static herr_t
+attach_ref_attr(hid_t file_id, hid_t loc_id)
+{
+ char dsetname1[] = "dataset1_pointed_by_ref_attr";
+ char dsetname2[] = "dataset2_pointed_by_ref_attr";
+ hid_t did1 = (-1), did2 = (-1), aid = (-1), sid = (-1), sid_ref = (-1);
+ hsize_t dims[2] = {2,9};
+ hsize_t dims_ref[1] = {2};
+ H5R_ref_t ref[2];
+ int data1[2][9] = {{1,1,1,1,1,1,1,1,1},{1,1,1,1,1,1,1,1,18}};
+ int data2[2][9] = {{2,2,2,2,2,2,2,2,2},{2,2,2,2,2,2,2,2,18}};
+
+ /* creates two simple datasets */
+ if((sid = H5Screate_simple(2, dims, NULL)) < 0) TEST_ERROR
+ if((sid_ref = H5Screate_simple(1, dims_ref, NULL)) < 0) TEST_ERROR
+ if((did1 = H5Dcreate2(file_id, dsetname1, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+ if(H5Dwrite(did1, H5T_NATIVE_INT, H5S_ALL , H5S_ALL, H5P_DEFAULT,data1) < 0) TEST_ERROR
+ if((did2 = H5Dcreate2(file_id, dsetname2, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+ if(H5Dwrite(did2, H5T_NATIVE_INT, H5S_ALL , H5S_ALL, H5P_DEFAULT,data2) < 0) TEST_ERROR
+
+ /* create an attribute with two object references */
+ if(H5Rcreate_object(file_id, dsetname1, &ref[0]) < 0) TEST_ERROR
+ if(H5Rcreate_object(file_id, dsetname2, &ref[1]) < 0) TEST_ERROR
+ if((aid = H5Acreate2(loc_id, "obj_ref_attr", H5T_STD_REF, sid_ref, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+ if(H5Awrite(aid, H5T_STD_REF, ref) < 0) TEST_ERROR
+
+ if(H5Sclose(sid) < 0) TEST_ERROR
+ if(H5Sclose(sid_ref) < 0) TEST_ERROR
+ if(H5Dclose(did1) < 0) TEST_ERROR
+ if(H5Dclose(did2) < 0) TEST_ERROR
+ if(H5Aclose(aid) < 0) TEST_ERROR
+ if(H5Rdestroy(&ref[0]) < 0) TEST_ERROR
+ if(H5Rdestroy(&ref[1]) < 0) TEST_ERROR
+
+ return 0;
+
+error:
+ H5E_BEGIN_TRY {
+ H5Sclose(sid);
+ H5Sclose(sid_ref);
+ H5Dclose(did1);
+ H5Dclose(did2);
+ H5Aclose(aid);
+ H5Rdestroy(&ref[0]);
+ H5Rdestroy(&ref[1]);
+ } H5E_END_TRY;
+
+ return(-1);
+}
+
+/*-------------------------------------------------------------------------
+ * Function: attach_reg_ref_attr
+ *
+ * Purpose: Create an attribute with object references
+ *
+ * Return: Non-negative on success/Negative on failure
+ *
+ * Programmer: Peter Cao
+ * Monday, March 5, 2006
+ *
+ *-------------------------------------------------------------------------
+ */
+static herr_t
+attach_reg_ref_attr(hid_t file_id, hid_t loc_id)
+{
+ const char dsetnamev[] = "dataset_pointed_by_reg_ref_attr";
+ hid_t aid = (-1);
+ hid_t space_id = (-1); /* dataspace identifiers */
+ hid_t spacer_id = (-1); /* dataspace identifiers */
+ hid_t dsetv_id = (-1); /*dataset identifiers*/
+ hsize_t dims[2] = {2,9};
+ hsize_t dimsr[1] = {2};
+ int rank = 2;
+ int rankr =1;
+ H5R_ref_t ref[2];
+ int data[2][9] = {{1,1,2,3,3,4,5,5,999},{1,2,2,3,4,4,5,6,999}};
+ hsize_t start[2] = {0, 3};
+ hsize_t count[2] = {2, 3};
+ hsize_t coord[3][2] = {{0, 0}, {1, 6}, {0, 8}};
+ size_t num_points = 3;
+
+ /* create a 2D dataset */
+ if((space_id = H5Screate_simple(rank, dims, NULL)) < 0) TEST_ERROR
+ if((spacer_id = H5Screate_simple(rankr, dimsr, NULL)) < 0) TEST_ERROR
+ if((dsetv_id = H5Dcreate2(file_id, dsetnamev, H5T_NATIVE_INT, space_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+ if(H5Dwrite(dsetv_id, H5T_NATIVE_INT, H5S_ALL , H5S_ALL, H5P_DEFAULT,data) < 0) TEST_ERROR
+
+ /* create reg_ref of block selection */
+ if(H5Sselect_hyperslab(space_id,H5S_SELECT_SET,start,NULL,count,NULL) < 0) TEST_ERROR
+ if(H5Rcreate_region(file_id, dsetnamev, space_id, &ref[0]) < 0) TEST_ERROR
+
+ /* create reg_ref of point selection */
+ if(H5Sselect_none(space_id) < 0) TEST_ERROR
+ if(H5Sselect_elements(space_id, H5S_SELECT_SET, num_points, (const hsize_t *)coord) < 0) TEST_ERROR
+ if(H5Rcreate_region(file_id, dsetnamev, space_id, &ref[1]) < 0) TEST_ERROR
+
+ /* create reg_ref attribute */
+ if((aid = H5Acreate2(loc_id, "reg_ref_attr", H5T_STD_REF, spacer_id, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+ if(H5Awrite(aid, H5T_STD_REF, ref) < 0) TEST_ERROR
+
+ /* attach the reg_ref attribute to the dataset itself */
+ if(H5Aclose(aid) < 0) TEST_ERROR
+ if((aid = H5Acreate2(dsetv_id, "reg_ref_attr", H5T_STD_REF, spacer_id, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+ if(H5Awrite(aid, H5T_STD_REF, ref) < 0) TEST_ERROR
+
+ if(H5Sclose(spacer_id) < 0) TEST_ERROR
+ if(H5Sclose(space_id) < 0) TEST_ERROR
+ if(H5Dclose(dsetv_id) < 0) TEST_ERROR
+ if(H5Aclose(aid) < 0) TEST_ERROR
+ if(H5Rdestroy(&ref[0]) < 0) TEST_ERROR
+ if(H5Rdestroy(&ref[1]) < 0) TEST_ERROR
+
+
+ return 0;
+
+error:
+ H5E_BEGIN_TRY {
+ H5Sclose(spacer_id);
+ H5Sclose(space_id);
+ H5Dclose(dsetv_id);
+ H5Aclose(aid);
+ H5Rdestroy(&ref[0]);
+ H5Rdestroy(&ref[1]);
+ } H5E_END_TRY;
+
+ return(-1);
+}
+
+
+/*-------------------------------------------------------------------------
+ * Function: create_reg_ref_dataset
+ *
+ * Purpose: Create a dataset with region references
+ *
+ * Return: Non-negative on success/Negative on failure
+ *
+ * Programmer: Peter Cao
+ * Friday, August 4, 2006
+ *
+ *-------------------------------------------------------------------------
+ */
+static herr_t
+create_reg_ref_dataset(hid_t file_id, hid_t loc_id)
+{
+ const char dsetnamev[] = "dataset_pointed_by_ref_dset";
+ const char dsetnamer[] = "dataset_with_reg_ref";
+ const char dsetnamer1[] = "compact_dataset_with_reg_ref";
+ const char dsetnamer2[] = "compressed_dataset_with_reg_ref";
+ hid_t space_id = (-1); /* dataspace identifiers */
+ hid_t spacer_id = (-1);
+ hid_t dsetv_id = (-1); /*dataset identifiers*/
+ hid_t dsetr_id = (-1);
+ hsize_t dims[2] = {2,9};
+ hsize_t dimsr[1] = {2};
+ int rank = 2;
+ int rankr =1;
+ hsize_t chunk_size=1;
+ H5R_ref_t ref[2];
+ int data[2][9] = {{1,1,2,3,3,4,5,5,6},{1,2,2,3,4,4,5,6,6}};
+ hsize_t start[2];
+ hsize_t count[2];
+ hsize_t coord[3][2] = {{0, 0}, {1, 6}, {0, 8}};
+ size_t num_points = 3;
+ hid_t pid = (-1);
+
+ if((space_id = H5Screate_simple(rank, dims, NULL)) < 0) TEST_ERROR
+ if((spacer_id = H5Screate_simple(rankr, dimsr, NULL)) < 0) TEST_ERROR
+ if((dsetv_id = H5Dcreate2(file_id, dsetnamev, H5T_NATIVE_INT, space_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+ if(H5Dwrite(dsetv_id, H5T_NATIVE_INT, H5S_ALL , H5S_ALL, H5P_DEFAULT,data) < 0) TEST_ERROR
+ if((dsetr_id = H5Dcreate2(loc_id, dsetnamer, H5T_STD_REF, spacer_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+
+ start[0] = 0;
+ start[1] = 3;
+ count[0] = 2;
+ count[1] = 3;
+ if(H5Sselect_hyperslab(space_id,H5S_SELECT_SET,start,NULL,count,NULL) < 0) TEST_ERROR
+ if(H5Rcreate_region(file_id, dsetnamev, space_id, &ref[0]) < 0) TEST_ERROR
+ if(H5Sselect_none(space_id) < 0) TEST_ERROR
+ if(H5Sselect_elements(space_id, H5S_SELECT_SET, num_points, (const hsize_t *)coord) < 0) TEST_ERROR
+ if(H5Rcreate_region(file_id, dsetnamev, space_id, &ref[1]) < 0) TEST_ERROR
+ if(H5Dwrite(dsetr_id, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT,ref) < 0) TEST_ERROR
+ if(H5Dclose(dsetr_id) < 0) TEST_ERROR
+
+ /* create and set compact plist */
+ if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
+ if(H5Pset_layout(pid, H5D_COMPACT) < 0) TEST_ERROR
+
+ if((dsetr_id = H5Dcreate2(loc_id, dsetnamer1, H5T_STD_REF, spacer_id, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
+ if(H5Pclose(pid) < 0) TEST_ERROR
+ if(H5Dwrite(dsetr_id, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, ref) < 0) TEST_ERROR
+ if(H5Dclose(dsetr_id) < 0) TEST_ERROR
+
+ /* create and set comp & chunk plist */
+ if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
+ if(H5Pset_chunk(pid, 1, &chunk_size) < 0) TEST_ERROR
+ if(H5Pset_deflate(pid, 9) < 0) TEST_ERROR
+
+ if((dsetr_id = H5Dcreate2(loc_id, dsetnamer2, H5T_STD_REF, spacer_id, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
+ if(H5Pclose(pid) < 0) TEST_ERROR
+ if(H5Dwrite(dsetr_id, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT,ref) < 0) TEST_ERROR
+ if(H5Dclose(dsetr_id) < 0) TEST_ERROR
+
+ if(H5Sclose(space_id) < 0) TEST_ERROR
+ if(H5Sclose(spacer_id) < 0) TEST_ERROR
+ if(H5Dclose(dsetv_id) < 0) TEST_ERROR
+ if(H5Rdestroy(&ref[0]) < 0) TEST_ERROR
+ if(H5Rdestroy(&ref[1]) < 0) TEST_ERROR
+
+ return 0;
+
+
+error:
+ H5E_BEGIN_TRY {
+ H5Sclose(space_id);
+ H5Sclose(spacer_id);
+ H5Dclose(dsetr_id);
+ H5Dclose(dsetv_id);
+ H5Pclose(pid);
+ H5Rdestroy(&ref[0]);
+ H5Rdestroy(&ref[1]);
+ } H5E_END_TRY;
+
+ return(-1);
+}
+
+/*-------------------------------------------------------------------------
+ * Function: test_copy_attach_attributes
+ *
+ * Purpose: Attach NUM_ATTRIBUTES attributes to the object to be copied
+ *
+ * Return: Non-negative on success/Negative on failure
+ *
+ * Programmer: Peter Cao
+ * Friday, September 30, 2005
+ *
+ *-------------------------------------------------------------------------
+ */
+static int
+test_copy_attach_attributes(hid_t loc_id, hid_t type_id)
+{
+ hid_t aid = -1, sid = -1;
+ char attr_name[ATTR_NAME_LEN];
+ int attr_data[2];
+ hsize_t dim1 = 2;
+ hid_t acpl = -1;
+ unsigned u;
+ int ret_value = -1;
+
+ if((sid = H5Screate_simple(1, &dim1, NULL)) < 0 )
+ goto done;
+
+ /* Create attribute creation plist */
+ if((acpl = H5Pcreate(H5P_ATTRIBUTE_CREATE)) < 0)
+ goto done;
+
+ for(u = 0; u < num_attributes_g; u++) {
+ HDsprintf(attr_name, "%u attr", u);
+
+ /* Set attribute data */
+ attr_data[0] = (int)(100 * u);
+ attr_data[1] = (int)(200 * u);
+
+ /* Set attribute character set (alternate) */
+ if(u % 2) {
+ if(H5Pset_char_encoding(acpl, H5T_CSET_ASCII) < 0)
+ goto done;
+ } /* end if */
+ else
+ if(H5Pset_char_encoding(acpl, H5T_CSET_UTF8) < 0)
+ goto done;
+
+ if((aid = H5Acreate2(loc_id, attr_name, type_id, sid, acpl, H5P_DEFAULT)) < 0)
+ goto done;
+
+ if(H5Awrite(aid, H5T_NATIVE_INT, attr_data) < 0)
+ goto done;
+
+ if(aid > 0)
+ H5Aclose(aid);
+
+ aid = -1;
+ }
+
+ ret_value = 0;
+
+done:
+ if(sid > 0)
+ H5Sclose(sid);
+ if(aid > 0)
+ H5Aclose(aid);
+ if(acpl > 0)
+ H5Pclose(acpl);
+
+ return ret_value;
+}
+
+/*-------------------------------------------------------------------------
+ * Function: compare_attribute
+ *
+ * Purpose: Compare two attributes to check that they are equal
+ *
+ * Return: TRUE if attributes are equal/FALSE if they are different
+ *
+ * Programmer: Peter Cao
+ * Saturday, December 17, 2005
+ *
+ *-------------------------------------------------------------------------
+ */
+static int
+compare_attribute(hid_t aid, hid_t aid2, hid_t pid, const void *wbuf, hid_t obj_owner)
+{
+ hid_t sid = -1, sid2 = -1; /* Dataspace IDs */
+ hid_t tid = -1, tid2 = -1; /* Datatype IDs */
+ size_t elmt_size; /* Size of datatype */
+ htri_t is_committed; /* If the datatype is committed */
+ htri_t is_committed2; /* If the datatype is committed */
+ H5A_info_t ainfo; /* Attribute info */
+ H5A_info_t ainfo2; /* Attribute info */
+ hssize_t nelmts; /* # of elements in dataspace */
+ void *rbuf = NULL; /* Buffer for reading raw data */
+ void *rbuf2 = NULL; /* Buffer for reading raw data */
+
+ /* Check the character sets are equal */
+ if(H5Aget_info(aid, &ainfo) < 0) TEST_ERROR
+ if(H5Aget_info(aid2, &ainfo2) < 0) TEST_ERROR
+ if(ainfo.cset != ainfo2.cset) TEST_ERROR
+
+ /* Check the creation orders are equal (if appropriate) */
+ if(ainfo.corder_valid != ainfo2.corder_valid) TEST_ERROR
+ if(ainfo.corder_valid)
+ if(ainfo.corder != ainfo2.corder) TEST_ERROR
+
+ /* Check the datatypes are equal */
+
+ /* Open the datatype for the source attribute */
+ if((tid = H5Aget_type(aid)) < 0) TEST_ERROR
+
+ /* Open the datatype for the destination attribute */
+ if((tid2 = H5Aget_type(aid2)) < 0) TEST_ERROR
+
+ /* Check that both datatypes are committed/not committed */
+ if((is_committed = H5Tcommitted(tid)) < 0) TEST_ERROR
+ if((is_committed2 = H5Tcommitted(tid2)) < 0) TEST_ERROR
+ if(is_committed != is_committed2) TEST_ERROR
+
+ /* Compare the datatypes */
+ if(H5Tequal(tid, tid2) != TRUE) TEST_ERROR
+
+ /* Determine the size of datatype (for later) */
+ if((elmt_size = H5Tget_size(tid)) == 0) TEST_ERROR
+
+ /* Check the dataspaces are equal */
+
+ /* Open the dataspace for the source attribute */
+ if((sid = H5Aget_space(aid)) < 0) TEST_ERROR
+
+ /* Open the dataspace for the destination attribute */
+ if((sid2 = H5Aget_space(aid2)) < 0) TEST_ERROR
+
+ /* Compare the dataspaces */
+ if(H5Sextent_equal(sid, sid2) != TRUE) TEST_ERROR
+
+ /* Determine the number of elements in dataspace (for later) */
+ if((nelmts = H5Sget_simple_extent_npoints(sid2)) < 0) TEST_ERROR
+
+ /* Check the raw data is equal */
+
+ /* Allocate & initialize space for the raw data buffers */
+ if((rbuf = HDcalloc( elmt_size, (size_t)nelmts)) == NULL) TEST_ERROR
+ if((rbuf2 = HDcalloc( elmt_size, (size_t)nelmts)) == NULL) TEST_ERROR
+
+ /* Read data from the source attribute */
+ if(H5Aread(aid, tid, rbuf) < 0) TEST_ERROR
+
+ /* Read data from the destination attribute */
+ if(H5Aread(aid2, tid2, rbuf2) < 0) TEST_ERROR
+
+ /* Check raw data read in against data written out */
+ if(wbuf) {
+ if(!compare_data(aid, (hid_t)0, pid, tid, (size_t)nelmts, wbuf, rbuf, obj_owner)) TEST_ERROR
+ if(!compare_data(aid2, (hid_t)0, pid, tid2, (size_t)nelmts, wbuf, rbuf2, obj_owner)) TEST_ERROR
+ } /* end if */
+ /* Don't have written data, just compare data between the two attributes */
+ else
+ if(!compare_data(aid, aid2, pid, tid, (size_t)nelmts, rbuf, rbuf2, obj_owner)) TEST_ERROR
+
+ /* Reclaim vlen data, if necessary */
+ if(H5Tdetect_class(tid, H5T_VLEN) == TRUE || H5Tdetect_class(tid, H5T_REFERENCE) == TRUE)
+ if(H5Treclaim(tid, sid, H5P_DEFAULT, rbuf) < 0) TEST_ERROR
+ if(H5Tdetect_class(tid2, H5T_VLEN) == TRUE || H5Tdetect_class(tid2, H5T_REFERENCE) == TRUE)
+ if(H5Treclaim(tid2, sid2, H5P_DEFAULT, rbuf2) < 0) TEST_ERROR
+
+ /* Release raw data buffers */
+ HDfree(rbuf);
+ rbuf = NULL;
+ HDfree(rbuf2);
+ rbuf2 = NULL;
+
+ /* close the source dataspace */
+ if(H5Sclose(sid) < 0) TEST_ERROR
+
+ /* close the destination dataspace */
+ if(H5Sclose(sid2) < 0) TEST_ERROR
+
+ /* close the source datatype */
+ if(H5Tclose(tid) < 0) TEST_ERROR
+
+ /* close the destination datatype */
+ if(H5Tclose(tid2) < 0) TEST_ERROR
+
+ return TRUE;
+
+error:
+ if(rbuf)
+ HDfree(rbuf);
+ if(rbuf2)
+ HDfree(rbuf2);
+ H5E_BEGIN_TRY {
+ H5Sclose(sid2);
+ H5Sclose(sid);
+ H5Tclose(tid2);
+ H5Tclose(tid);
+ } H5E_END_TRY;
+ return FALSE;
+} /* end compare_attribute() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: compare_std_attributes
+ *
+ * Purpose: Compare "standard" attributes on two objects to check that they are equal
+ *
+ * Return: TRUE if objects have same attributes/FALSE if they are different
+ *
+ * Programmer: Quincey Koziol
+ * Monday, October 31, 2005
+ *
+ * Note: This isn't very general, the attributes are assumed to be
+ * those written in test_copy_attach_attributes().
+ *
+ *-------------------------------------------------------------------------
+ */
+static int
+compare_std_attributes(hid_t oid, hid_t oid2, hid_t pid)
+{
+ hid_t aid = -1, aid2 = -1; /* Attribute IDs */
+ H5O_info_t oinfo1, oinfo2; /* Object info */
+ unsigned cpy_flags; /* Object copy flags */
+
+ /* Retrieve the object copy flags from the property list, if it's non-DEFAULT */
+ if(pid != H5P_DEFAULT) {
+ if(H5Pget_copy_object(pid, &cpy_flags) < 0) TEST_ERROR
+ } /* end if */
+ else
+ cpy_flags = 0;
+
+ /* Check the number of attributes on source dataset */
+ if(H5Oget_info2(oid, &oinfo1, H5O_INFO_NUM_ATTRS) < 0) TEST_ERROR
+
+ /* Check the number of attributes on destination dataset */
+ if(H5Oget_info2(oid2, &oinfo2, H5O_INFO_NUM_ATTRS) < 0) TEST_ERROR
+
+ if(cpy_flags & H5O_COPY_WITHOUT_ATTR_FLAG) {
+ /* Check that the destination has no attributes */
+ if(oinfo2.num_attrs != 0) TEST_ERROR
+ } /* end if */
+ else {
+ char attr_name[ATTR_NAME_LEN]; /* Attribute name */
+ unsigned i; /* Local index variable */
+
+ /* Compare the number of attributes */
+ if(oinfo1.num_attrs != oinfo2.num_attrs) TEST_ERROR
+
+ /* Check the attributes are equal */
+ for(i = 0; i < (unsigned)oinfo1.num_attrs; i++) {
+ if((aid = H5Aopen_by_idx(oid, ".", H5_INDEX_CRT_ORDER, H5_ITER_INC, (hsize_t)i, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+ if(H5Aget_name(aid, (size_t)ATTR_NAME_LEN, attr_name) < 0) TEST_ERROR
+
+ if((aid2 = H5Aopen(oid2, attr_name, H5P_DEFAULT)) < 0) TEST_ERROR
+
+ /* Check the attributes are equal */
+ if(!compare_attribute(aid, aid2, pid, NULL, oid)) TEST_ERROR
+
+ /* Close the attributes */
+ if(H5Aclose(aid) < 0) TEST_ERROR
+ if(H5Aclose(aid2) < 0) TEST_ERROR
+ } /* end for */
+ } /* end if */
+
+ /* Objects should be the same. :-) */
+ return TRUE;
+
+error:
+ H5E_BEGIN_TRY {
+ H5Aclose(aid2);
+ H5Aclose(aid);
+ } H5E_END_TRY;
+ return FALSE;
+} /* end compare_std_attributes() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: compare_data
+ *
+ * Purpose: Compare two buffers of data to check that they are equal
+ *
+ * Return: TRUE if buffer are equal/FALSE if they are different
+ *
+ * Programmer: Quincey Koziol
+ * Monday, November 21, 2005
+ *
+ *-------------------------------------------------------------------------
+ */
+static int
+compare_data(hid_t parent1, hid_t parent2, hid_t pid, hid_t tid, size_t nelmts,
+ const void *buf1, const void *buf2, hid_t obj_owner)
+{
+ size_t elmt_size; /* Size of an element */
+
+ /* Check size of each element */
+ if((elmt_size = H5Tget_size(tid)) == 0) TEST_ERROR
+
+ /* If the type is a compound containing a vlen, loop over all elements for
+ * each compound member. Compounds containing reference are not supported
+ * yet. */
+ if((H5Tget_class(tid) == H5T_COMPOUND)
+ && (H5Tdetect_class(tid, H5T_VLEN) == TRUE)) {
+ hid_t memb_id; /* Member id */
+ const uint8_t *memb1; /* Pointer to current member */
+ const uint8_t *memb2; /* Pointer to current member */
+ int nmembs; /* Number of members */
+ size_t memb_off; /* Member offset */
+ size_t memb_size; /* Member size */
+ unsigned memb_idx; /* Member index */
+ size_t elmt; /* Current element */
+
+ /* Get number of members in compound */
+ if((nmembs = H5Tget_nmembers(tid)) < 0) TEST_ERROR
+
+ /* Loop over members */
+ for(memb_idx=0; memb_idx<(unsigned)nmembs; memb_idx++) {
+ /* Get member offset. Note that we cannot check for an error here.
+ */
+ memb_off = H5Tget_member_offset(tid, memb_idx);
+
+ /* Get member id */
+ if((memb_id = H5Tget_member_type(tid, memb_idx)) < 0) TEST_ERROR
+
+ /* Get member size */
+ if((memb_size = H5Tget_size(memb_id)) == 0) TEST_ERROR
+
+ /* Set up pointers to member in the first element */
+ memb1 = (const uint8_t *)buf1 + memb_off;
+ memb2 = (const uint8_t *)buf2 + memb_off;
+
+ /* Check if this member contains (or is) a vlen */
+ if(H5Tget_class(memb_id) == H5T_VLEN) {
+ hid_t base_id; /* vlen base type id */
+
+ /* Get base type of vlen datatype */
+ if((base_id = H5Tget_super(memb_id)) < 0) TEST_ERROR
+
+ /* Iterate over all elements, recursively calling this function
+ * for each */
+ for(elmt=0; elmt<nelmts; elmt++) {
+ /* Check vlen lengths */
+ if(((const hvl_t *)((const void *)memb1))->len
+ != ((const hvl_t *)((const void *)memb2))->len)
+ TEST_ERROR
+
+ /* Check vlen data */
+ if(!compare_data(parent1, parent2, pid, base_id,
+ ((const hvl_t *)((const void *)memb1))->len,
+ ((const hvl_t *)((const void *)memb1))->p,
+ ((const hvl_t *)((const void *)memb2))->p, obj_owner))
+ TEST_ERROR
+
+ /* Update member pointers */
+ memb1 += elmt_size;
+ memb2 += elmt_size;
+ } /* end for */
+ } else {
+ /* vlens cannot currently be nested below the top layer of a
+ * compound */
+ HDassert(H5Tdetect_class(memb_id, H5T_VLEN) == FALSE);
+
+ /* Iterate over all elements, calling memcmp() for each */
+ for(elmt=0; elmt<nelmts; elmt++) {
+ if(HDmemcmp(memb1, memb2, memb_size))
+ TEST_ERROR
+
+ /* Update member pointers */
+ memb1 += elmt_size;
+ memb2 += elmt_size;
+ } /* end for */
+ } /* end else */
+ } /* end for */
+ } else if(H5Tdetect_class(tid, H5T_VLEN) == TRUE) {
+ const hvl_t *vl_buf1, *vl_buf2; /* Aliases for buffers to compare */
+ hid_t base_tid; /* Base type of vlen datatype */
+ size_t u; /* Local index variable */
+
+ /* Check for "simple" vlen datatype */
+ if(H5Tget_class(tid) != H5T_VLEN) TEST_ERROR
+
+ /* Get base type of vlen datatype */
+ if((base_tid = H5Tget_super(tid)) < 0) TEST_ERROR
+
+ /* Loop over elements in buffers */
+ vl_buf1 = (const hvl_t *)buf1;
+ vl_buf2 = (const hvl_t *)buf2;
+ for(u = 0; u < nelmts; u++, vl_buf1++, vl_buf2++) {
+ /* Check vlen lengths */
+ if(vl_buf1->len != vl_buf2->len) TEST_ERROR
+
+ /* Check vlen data */
+ if(!compare_data(parent1, parent2, pid, base_tid, vl_buf1->len, vl_buf1->p, vl_buf2->p, obj_owner)) TEST_ERROR
+ } /* end for */
+
+ if(H5Tclose(base_tid) < 0) TEST_ERROR
+ } /* end if */
+ else if(H5Tdetect_class(tid, H5T_REFERENCE) == TRUE) {
+ size_t u; /* Local index variable */
+
+ /* Check for "simple" reference datatype */
+ if(H5Tget_class(tid) != H5T_REFERENCE) TEST_ERROR
+
+ /* Check for object or region reference */
+ if(H5Tequal(tid, H5T_STD_REF) > 0) {
+ const H5R_ref_t *ref_buf1, *ref_buf2; /* Aliases for buffers to compare */
+
+ /* Loop over elements in buffers */
+ ref_buf1 = (const H5R_ref_t *)buf1;
+ ref_buf2 = (const H5R_ref_t *)buf2;
+ for(u = 0; u < nelmts; u++, ref_buf1++, ref_buf2++) {
+ hid_t obj1_id, obj2_id; /* IDs for objects referenced */
+ H5O_type_t obj1_type, obj2_type; /* Types of objects referenced */
+
+ /* Check for types of objects handled */
+ if(H5Rget_obj_type3(ref_buf1, H5P_DEFAULT, &obj1_type) < 0) TEST_ERROR
+ if(H5Rget_obj_type3(ref_buf2, H5P_DEFAULT, &obj2_type) < 0) TEST_ERROR
+ if(obj1_type != obj2_type) TEST_ERROR
+
+ /* Open referenced objects */
+ if((obj1_id = H5Ropen_object(ref_buf1, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+ if((obj2_id = H5Ropen_object(ref_buf2, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+
+ /* break the infinite loop when the ref_object points to itself */
+ if(obj_owner > 0) {
+ H5O_info_t oinfo1, oinfo2;
+
+ if(H5Oget_info2(obj_owner, &oinfo1, H5O_INFO_BASIC) < 0) TEST_ERROR
+ if(H5Oget_info2(obj1_id, &oinfo2, H5O_INFO_BASIC) < 0) TEST_ERROR
+ if(H5F_addr_eq(oinfo1.addr, oinfo2.addr)) {
+ if(H5Oclose(obj1_id) < 0) TEST_ERROR
+ if(H5Oclose(obj2_id) < 0) TEST_ERROR
+ return TRUE;
+ }
+ }
+
+ /* Check for types of objects handled */
+ switch(obj1_type) {
+ case H5O_TYPE_DATASET:
+ if(compare_datasets(obj1_id, obj2_id, pid, NULL) != TRUE) TEST_ERROR
+ break;
+
+ case H5O_TYPE_GROUP:
+ if(compare_groups(obj1_id, obj2_id, pid, -1, 0) != TRUE) TEST_ERROR
+ break;
+
+ case H5O_TYPE_NAMED_DATATYPE:
+ if(H5Tequal(obj1_id, obj2_id) != TRUE) TEST_ERROR
+ break;
+
+ case H5O_TYPE_MAP:
+ /* Maps not supported in native VOL connector */
+
+ case H5O_TYPE_UNKNOWN:
+ case H5O_TYPE_NTYPES:
+ default:
+ TEST_ERROR
+ } /* end switch */
+
+ /* Close objects */
+ if(H5Oclose(obj1_id) < 0) TEST_ERROR
+ if(H5Oclose(obj2_id) < 0) TEST_ERROR
+
+ if(H5Rget_type(ref_buf1) == H5R_DATASET_REGION2) {
+ hid_t obj1_sid, obj2_sid; /* Dataspace IDs for objects referenced */
+
+ /* Get regions for referenced datasets */
+ if((obj1_sid = H5Ropen_region(ref_buf1, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+ if((obj2_sid = H5Ropen_region(ref_buf2, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+
+ /* Check if dataspaces are the same shape */
+ if(H5Sselect_shape_same(obj1_sid, obj2_sid) < 0) TEST_ERROR
+
+ /* Close dataspaces */
+ if(H5Sclose(obj1_sid) < 0) TEST_ERROR
+ if(H5Sclose(obj2_sid) < 0) TEST_ERROR
+ } /* end if */
+ } /* end for */
+ } /* end if */
+ else
+ TEST_ERROR
+ } /* end else */
+ else
+ if(HDmemcmp(buf1, buf2, (elmt_size * nelmts))) TEST_ERROR
+
+ /* Data should be the same. :-) */
+ return TRUE;
+
+error:
+ return FALSE;
+} /* end compare_data() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: compare_datasets
+ *
+ * Purpose: Compare two datasets to check that they are equal
+ *
+ * Return: TRUE if datasets are equal/FALSE if they are different
+ *
+ * Programmer: Quincey Koziol
+ * Tuesday, October 25, 2005
+ *
+ *-------------------------------------------------------------------------
+ */
+static int
+compare_datasets(hid_t did, hid_t did2, hid_t pid, const void *wbuf)
+{
+ hid_t sid = -1, sid2 = -1; /* Dataspace IDs */
+ hid_t tid = -1, tid2 = -1; /* Datatype IDs */
+ hid_t dcpl = -1, dcpl2 = -1; /* Dataset creation property list IDs */
+ size_t elmt_size; /* Size of datatype */
+ htri_t is_committed; /* If the datatype is committed */
+ htri_t is_committed2; /* If the datatype is committed */
+ int nfilters; /* Number of filters applied to dataset */
+ hssize_t nelmts; /* # of elements in dataspace */
+ void *rbuf = NULL; /* Buffer for reading raw data */
+ void *rbuf2 = NULL; /* Buffer for reading raw data */
+ H5D_space_status_t space_status; /* Dataset's raw dataspace status */
+ H5D_space_status_t space_status2; /* Dataset's raw dataspace status */
+
+ /* Check the datatypes are equal */
+
+ /* Open the datatype for the source dataset */
+ if((tid = H5Dget_type(did)) < 0) TEST_ERROR
+
+ /* Open the datatype for the destination dataset */
+ if((tid2 = H5Dget_type(did2)) < 0) TEST_ERROR
+
+ /* Check that both datatypes are committed/not committed */
+ if((is_committed = H5Tcommitted(tid)) < 0) TEST_ERROR
+ if((is_committed2 = H5Tcommitted(tid2)) < 0) TEST_ERROR
+ if(is_committed != is_committed2) TEST_ERROR
+
+ /* Compare the datatypes */
+ if(H5Tequal(tid, tid2) != TRUE) TEST_ERROR
+
+ /* Determine the size of datatype (for later) */
+ if((elmt_size = H5Tget_size(tid)) == 0) TEST_ERROR
+
+
+ /* Check the dataspaces are equal */
+
+ /* Open the dataspace for the source dataset */
+ if((sid = H5Dget_space(did)) < 0) TEST_ERROR
+
+ /* Open the dataspace for the destination dataset */
+ if((sid2 = H5Dget_space(did2)) < 0) TEST_ERROR
+
+ /* Compare the dataspaces */
+ if(H5Sextent_equal(sid, sid2) != TRUE) TEST_ERROR
+
+ /* Determine the number of elements in dataspace (for later) */
+ if((nelmts = H5Sget_simple_extent_npoints(sid)) < 0) TEST_ERROR
+
+
+ /* Check the dataset creation property lists are equal */
+
+ /* Open the dataset creation property list for the source dataset */
+ if((dcpl = H5Dget_create_plist(did)) < 0) TEST_ERROR
+
+ /* Open the dataset creation property list for the destination dataset */
+ if((dcpl2 = H5Dget_create_plist(did2)) < 0) TEST_ERROR
+
+ /* Compare the rest of the dataset creation property lists */
+ if(H5Pequal(dcpl, dcpl2) != TRUE) TEST_ERROR
+
+ /* Get the number of filters on dataset (for later) */
+ if((nfilters = H5Pget_nfilters(dcpl)) < 0) TEST_ERROR
+
+ /* close the source dataset creation property list */
+ if(H5Pclose(dcpl) < 0) TEST_ERROR
+
+ /* close the destination dataset creation property list */
+ if(H5Pclose(dcpl2) < 0) TEST_ERROR
+
+
+ /* Check the allocated storage is the same */
+
+ /* Check that the space allocation status is the same */
+ if(H5Dget_space_status(did, &space_status) < 0) TEST_ERROR
+ if(H5Dget_space_status(did2, &space_status2) < 0) TEST_ERROR
+ if(space_status != space_status2) TEST_ERROR
+
+ /* Check that the space used is the same */
+ /* (Don't check if the dataset is filtered (i.e. compressed, etc.) and
+ * the datatype is VLEN, since the addresses for the vlen
+ * data in each dataset will (probably) be different and the storage
+ * size will thus vary)
+ */
+ if(!(nfilters > 0 && (H5Tdetect_class(tid, H5T_VLEN) ||
+ (H5Tdetect_class(tid, H5T_REFERENCE) && H5Tequal(tid, H5T_STD_REF))))) {
+ hsize_t storage_size = H5Dget_storage_size(did); /* Dataset's raw data storage size */
+ hsize_t storage_size2 = H5Dget_storage_size(did2); /* 2nd Dataset's raw data storage size */
+
+ if(storage_size != storage_size2) TEST_ERROR
+ } /* end if */
+
+ /* Check the raw data is equal */
+
+ /* Allocate & initialize space for the raw data buffers */
+ if((rbuf = HDcalloc( elmt_size, (size_t)nelmts)) == NULL) TEST_ERROR
+ if((rbuf2 = HDcalloc( elmt_size, (size_t)nelmts)) == NULL) TEST_ERROR
+
+ /* Read data from datasets */
+ if(H5Dread(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf) < 0) TEST_ERROR
+ if(H5Dread(did2, tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf2) < 0) TEST_ERROR
+
+ /* Check raw data read in against data written out */
+ if(wbuf) {
+ if(!compare_data(did, (hid_t)0, pid, tid, (size_t)nelmts, wbuf, rbuf, did)) TEST_ERROR
+ if(!compare_data(did2, (hid_t)0, pid, tid2, (size_t)nelmts, wbuf, rbuf2, did2)) TEST_ERROR
+ } /* end if */
+ /* Don't have written data, just compare data between the two datasets */
+ else
+ if(!compare_data(did, did2, pid, tid, (size_t)nelmts, rbuf, rbuf2, did)) TEST_ERROR
+
+ /* Reclaim vlen data, if necessary */
+ if(H5Tdetect_class(tid, H5T_VLEN) == TRUE || H5Tdetect_class(tid, H5T_REFERENCE) == TRUE)
+ if(H5Treclaim(tid, sid, H5P_DEFAULT, rbuf) < 0) TEST_ERROR
+ if(H5Tdetect_class(tid2, H5T_VLEN) == TRUE || H5Tdetect_class(tid2, H5T_REFERENCE) == TRUE)
+ if(H5Treclaim(tid2, sid2, H5P_DEFAULT, rbuf2) < 0) TEST_ERROR
+
+ /* Release raw data buffers */
+ HDfree(rbuf);
+ rbuf = NULL;
+ HDfree(rbuf2);
+ rbuf2 = NULL;
+
+ /* close the source dataspace */
+ if(H5Sclose(sid) < 0) TEST_ERROR
+
+ /* close the destination dataspace */
+ if(H5Sclose(sid2) < 0) TEST_ERROR
+
+ /* close the source datatype */
+ if(H5Tclose(tid) < 0) TEST_ERROR
+
+ /* close the destination datatype */
+ if(H5Tclose(tid2) < 0) TEST_ERROR
+
+
+ /* Check if the attributes are equal */
+ if(compare_std_attributes(did, did2, pid) != TRUE) TEST_ERROR
+
+
+ /* Datasets should be the same. :-) */
+ return TRUE;
+
+error:
+ H5E_BEGIN_TRY {
+ if(rbuf)
+ HDfree(rbuf);
+ if(rbuf2)
+ HDfree(rbuf2);
+ H5Pclose(dcpl2);
+ H5Pclose(dcpl);
+ H5Sclose(sid2);
+ H5Sclose(sid);
+ H5Tclose(tid2);
+ H5Tclose(tid);
+ } H5E_END_TRY;
+ return FALSE;
+} /* end compare_datasets() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: compare_groups
+ *
+ * Purpose: Compare two groups to check that they are "equal"
+ *
+ * Return: TRUE if group are equal/FALSE if they are different
+ *
+ * Programmer: Quincey Koziol
+ * Monday, October 31, 2005
+ *
+ *-------------------------------------------------------------------------
+ */
+static int
+compare_groups(hid_t gid, hid_t gid2, hid_t pid, int depth, unsigned copy_flags)
+{
+ H5G_info_t ginfo; /* Group info struct */
+ H5G_info_t ginfo2; /* Group info struct */
+ hsize_t idx; /* Index over the objects in group */
+ unsigned cpy_flags; /* Object copy flags */
+
+ /* Retrieve the object copy flags from the property list, if it's non-DEFAULT */
+ if(pid != H5P_DEFAULT) {
+ if(H5Pget_copy_object(pid, &cpy_flags) < 0) TEST_ERROR
+ } /* end if */
+ else
+ cpy_flags = 0;
+
+ /* Check if both groups have the same # of objects */
+ if(H5Gget_info(gid, &ginfo) < 0) TEST_ERROR
+ if(H5Gget_info(gid2, &ginfo2) < 0) TEST_ERROR
+ if((cpy_flags & H5O_COPY_SHALLOW_HIERARCHY_FLAG) && depth == 0) {
+ if(ginfo2.nlinks != 0) TEST_ERROR
+ } /* end if */
+ else {
+ if(ginfo.nlinks != ginfo2.nlinks) TEST_ERROR
+ } /* end if */
+
+ /* Check contents of groups */
+ if(ginfo2.nlinks > 0) {
+ char objname[NAME_BUF_SIZE]; /* Name of object in group */
+ char objname2[NAME_BUF_SIZE]; /* Name of object in group */
+ H5L_info_t linfo; /* Link information */
+ H5L_info_t linfo2; /* Link information */
+
+ /* Loop over contents of groups */
+ for(idx = 0; idx < ginfo.nlinks; idx++) {
+ /* Check name of objects */
+ if(H5Lget_name_by_idx(gid, ".", H5_INDEX_NAME, H5_ITER_INC, idx, objname, (size_t)NAME_BUF_SIZE, H5P_DEFAULT) < 0) TEST_ERROR
+ if(H5Lget_name_by_idx(gid2, ".", H5_INDEX_NAME, H5_ITER_INC, idx, objname2, (size_t)NAME_BUF_SIZE, H5P_DEFAULT) < 0) TEST_ERROR
+ if(HDstrcmp(objname, objname2)) TEST_ERROR
+
+ /* Get link info */
+ if(H5Lget_info(gid, objname, &linfo, H5P_DEFAULT) < 0) TEST_ERROR
+ if(H5Lget_info(gid2, objname2, &linfo2, H5P_DEFAULT) < 0) TEST_ERROR
+ if(linfo.type != linfo2.type) TEST_ERROR
+
+ /* Extra checks for "real" objects */
+ if(linfo.type == H5L_TYPE_HARD) {
+ hid_t oid, oid2; /* IDs of objects within group */
+ H5O_info_t oinfo, oinfo2; /* Object info */
+
+ /* Compare some pieces of the object info */
+ if(H5Oget_info_by_name2(gid, objname, &oinfo, H5O_INFO_BASIC|H5O_INFO_HDR, H5P_DEFAULT) < 0) TEST_ERROR
+ if(H5Oget_info_by_name2(gid2, objname2, &oinfo2, H5O_INFO_BASIC|H5O_INFO_HDR, H5P_DEFAULT) < 0) TEST_ERROR
+
+ if(oinfo.type != oinfo2.type) TEST_ERROR
+ if(oinfo.rc != oinfo2.rc) TEST_ERROR
+
+ /* If NULL messages are preserved, the number of messages
+ * should be the same in the destination.
+ * Otherwise, it should simply be true that the number
+ * of messages hasn't increased.
+ */
+ if(H5O_COPY_PRESERVE_NULL_FLAG & copy_flags) {
+ if(oinfo.hdr.nmesgs != oinfo2.hdr.nmesgs)
+ ;
+ else
+ if(oinfo.hdr.nmesgs < oinfo2.hdr.nmesgs) TEST_ERROR
+ }
+
+ /* Check for object already having been compared */
+ if(addr_lookup(&oinfo))
+ continue;
+ else
+ addr_insert(&oinfo);
+
+ /* Open objects */
+ if((oid = H5Oopen(gid, objname, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
+ if((oid2 = H5Oopen(gid2, objname2, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
+
+ /* Compare objects within group */
+ switch(oinfo.type) {
+ case H5O_TYPE_GROUP:
+ /* Compare groups */
+ if(compare_groups(oid, oid2, pid, depth - 1, copy_flags) != TRUE) TEST_ERROR
+ break;
+
+ case H5O_TYPE_DATASET:
+ /* Compare datasets */
+ if(compare_datasets(oid, oid2, pid, NULL) != TRUE) TEST_ERROR
+ break;
+
+ case H5O_TYPE_NAMED_DATATYPE:
+ /* Compare datatypes */
+ if(H5Tequal(oid, oid2) != TRUE) TEST_ERROR
+ break;
+
+ case H5O_TYPE_MAP:
+ HDassert(0 && "maps not supported in native VOL connector");
+
+ case H5O_TYPE_UNKNOWN:
+ case H5O_TYPE_NTYPES:
+ default:
+ HDassert(0 && "Unknown type of object");
+ break;
+ } /* end switch */
+
+ /* Close objects */
+ if(H5Oclose(oid) < 0) TEST_ERROR
+ if(H5Oclose(oid2) < 0) TEST_ERROR
+ } /* end if */
+ else {
+ /* Check that both links are the same size */
+ if(linfo.u.val_size != linfo2.u.val_size) TEST_ERROR
+
+ /* Compare link values */
+ if(linfo.type == H5L_TYPE_SOFT ||
+ (linfo.type >= H5L_TYPE_UD_MIN && linfo.type <= H5L_TYPE_MAX)) {
+ char linkval[NAME_BUF_SIZE]; /* Link value */
+ char linkval2[NAME_BUF_SIZE]; /* Link value */
+
+ /* Get link values */
+ HDassert(linfo.u.val_size <= NAME_BUF_SIZE);
+ if(H5Lget_val(gid, objname, linkval, (size_t)NAME_BUF_SIZE, H5P_DEFAULT) < 0) TEST_ERROR
+ if(H5Lget_val(gid2, objname2, linkval2, (size_t)NAME_BUF_SIZE, H5P_DEFAULT) < 0) TEST_ERROR
+
+ /* Compare link data */
+ if(HDmemcmp(linkval, linkval2, linfo.u.val_size)) TEST_ERROR
+ } /* end else-if */
+ else {
+HDassert(0 && "Unknown type of link");
+ } /* end else */
+ } /* end else */
+ } /* end for */
+ } /* end if */
+
+ /* Check if the attributes are equal */
+ if(compare_std_attributes(gid, gid2, pid) != TRUE) TEST_ERROR
+
+ /* Groups should be the same. :-) */
+ return TRUE;
+
+error:
+ H5E_BEGIN_TRY {
+ } H5E_END_TRY;
+ return FALSE;
+} /* end compare_groups() */
+
+/*-------------------------------------------------------------------------
+ * Function: test_copy_option
+ *
+ * Purpose: Create a group in SRC file and copy it to DST file
+ *
+ * Return: Success: 0
+ * Failure: number of errors
+ *
+ * Programmer: Peter Cao
+ * March 11, 2006
+ *
+ *-------------------------------------------------------------------------
+ */
+static int
+test_copy_option(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl,
+ unsigned flag, hbool_t crt_intermediate_grp, const char* test_desciption)
+{
+ hid_t fid_src = -1, fid_dst = -1, fid_ext = -1; /* File IDs */
+ hid_t sid = -1; /* Dataspace ID */
+ hid_t did = -1; /* Dataset ID */
+ hid_t gid=-1, gid2=-1, gid_ref=-1; /* Group IDs */
+ hid_t gid_sub=-1, gid_sub_sub=-1; /* Sub-group ID */
+ hid_t pid=-1, lcpl_id=-1; /* Property IDs */
+ unsigned cpy_flags; /* Object copy flags */
+ int depth = -1; /* Copy depth */
+ hsize_t dim2d[2];
+ int buf[DIM_SIZE_1][DIM_SIZE_2];
+ int i, j;
+ char src_filename[NAME_BUF_SIZE];
+ char dst_filename[NAME_BUF_SIZE];
+
+ TESTING(test_desciption);
+
+ /* set initial data values */
+ for (i=0; i<DIM_SIZE_1; i++)
+ for (j=0; j<DIM_SIZE_2; j++)
+ buf[i][j] = 10000 + 100*i+j;
+
+ /* Initialize the filenames */
+ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename);
+ h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename);
+
+ /* Reset file address checking info */
+ addr_reset();
+
+ /* create source file */
+ if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR
+
+ /* create group at the SRC file */
+ if((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+
+ /* attach attributes to the group */
+ if(test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR
+
+ /* Set dataspace dimensions */
+ dim2d[0]=DIM_SIZE_1;
+ dim2d[1]=DIM_SIZE_2;
+
+ /* create dataspace */
+ if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
+
+ /* add a dataset to the top group */
+ if((did = H5Dcreate2(gid, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+ if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
+ if(H5Dclose(did) < 0) TEST_ERROR
+
+ /* create a sub-group */
+ if((gid_sub = H5Gcreate2(fid_src, NAME_GROUP_SUB, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+
+ /* add a dataset to the sub group */
+ if((did = H5Dcreate2(gid_sub, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+ if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
+ if(H5Dclose(did) < 0) TEST_ERROR
+
+ /* create sub-sub-group */
+ if((gid_sub_sub = H5Gcreate2(gid_sub, NAME_GROUP_SUB_SUB2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+
+ /* add a dataset to the sub sub group */
+ if((did = H5Dcreate2(gid_sub_sub, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+ if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
+
+ /* close dataset */
+ if(H5Dclose(did) < 0) TEST_ERROR
+
+ /* close dataspace */
+ if(H5Sclose(sid) < 0) TEST_ERROR
+
+ if(H5Gclose(gid_sub_sub) < 0) TEST_ERROR
+
+ if(H5Gclose(gid_sub) < 0) TEST_ERROR
+
+ /* close the group */
+ if(H5Gclose(gid) < 0) FAIL_STACK_ERROR
+
+ if((flag & H5O_COPY_EXPAND_SOFT_LINK_FLAG) > 0) {
+ /* Create group to copy */
+ if((gid = H5Gcreate2(fid_src, NAME_GROUP_LINK, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
+ if(H5Lcreate_soft(NAME_DATASET_SUB_SUB, fid_src, NAME_LINK_SOFT, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR
+ if(H5Lcreate_soft("nowhere", fid_src, NAME_LINK_SOFT_DANGLE, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR
+ if(H5Gclose(gid) < 0) FAIL_STACK_ERROR
+
+ /* Create group to compare with */
+ if((gid = H5Gcreate2(fid_src, NAME_GROUP_LINK2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
+ if(H5Lcreate_hard(fid_src, NAME_DATASET_SUB_SUB, H5L_SAME_LOC, NAME_LINK_SOFT2, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR
+ if(H5Lcreate_soft("nowhere", fid_src, NAME_LINK_SOFT_DANGLE2, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR
+ if(H5Gclose(gid) < 0) FAIL_STACK_ERROR
+ } /* end if */
+
+ if((flag & H5O_COPY_EXPAND_EXT_LINK_FLAG) > 0) {
+ char ext_filename[NAME_BUF_SIZE];
+
+ h5_fixname(FILENAME[2], src_fapl, ext_filename, sizeof ext_filename);
+
+ /* Create the external file and dataset */
+ if((fid_ext = H5Fcreate(ext_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR
+ if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
+ if((did = H5Dcreate2(fid_ext, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+ if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
+ if(H5Dclose(did) < 0) TEST_ERROR
+ if(H5Fclose(fid_ext) < 0) TEST_ERROR
+
+ /* Create group to copy */
+ if(!(flag & H5O_COPY_EXPAND_SOFT_LINK_FLAG)) {
+ if((gid = H5Gcreate2(fid_src, NAME_GROUP_LINK, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+ } /* end if */
+ else
+ if((gid = H5Gopen2(fid_src, NAME_GROUP_LINK, H5P_DEFAULT)) < 0) TEST_ERROR
+ if(H5Lcreate_external(ext_filename, NAME_DATASET_SIMPLE, fid_src, NAME_LINK_EXTERN, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
+ if(H5Lcreate_external("no_file", "no_object", fid_src, NAME_LINK_EXTERN_DANGLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
+ if(H5Gclose(gid) < 0) TEST_ERROR
+
+ /* Create group to compare with */
+ if(!(flag & H5O_COPY_EXPAND_SOFT_LINK_FLAG)) {
+ if((gid = H5Gcreate2(fid_src, NAME_GROUP_LINK2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+ } /* end if */
+ else
+ if((gid = H5Gopen2(fid_src, NAME_GROUP_LINK2, H5P_DEFAULT)) < 0) TEST_ERROR
+ if((did = H5Dcreate2(fid_src, NAME_LINK_EXTERN2, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+ if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
+ if(H5Lcreate_external("no_file", "no_object", fid_src, NAME_LINK_EXTERN_DANGLE2, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
+ if(H5Dclose(did) < 0) TEST_ERROR
+ if(H5Gclose(gid) < 0) TEST_ERROR
+
+ /* Close dataspace */
+ if(H5Sclose(sid) < 0) TEST_ERROR
+ } /* end if */
+
+ if((flag & H5O_COPY_EXPAND_REFERENCE_FLAG) > 0) {
+ if((gid_ref = H5Gcreate2(fid_src, NAME_GROUP_REF, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+
+ /* create an attribute of new object references */
+ if(attach_ref_attr(fid_src, gid_ref) < 0) TEST_ERROR
+
+ /* create an attribute of region references */
+ if(attach_reg_ref_attr(fid_src, gid_ref) < 0) TEST_ERROR
+
+ /* create a dataset of region references */
+ if(create_reg_ref_dataset(fid_src, gid_ref) < 0) TEST_ERROR
+
+ /* Close group holding reference objects */
+ if(H5Gclose(gid_ref) < 0) TEST_ERROR
+ } /* end if */
+
+ /* close the SRC file */
+ if(H5Fclose(fid_src) < 0) TEST_ERROR
+
+ /* open the source file with read-only */
+ /* (except when expanding soft links */
+ if((flag & H5O_COPY_EXPAND_SOFT_LINK_FLAG) > 0) {
+ if((fid_src = H5Fopen(src_filename, H5F_ACC_RDWR, src_fapl)) < 0) TEST_ERROR
+ } /* end if */
+ else
+ if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR
+
+ /* create destination file */
+ if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR
+
+ /* Create an uncopied object in destination file so that addresses in source and destination
+ files aren't the same */
+ if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
+
+ /* create property to pass copy options */
+ if((pid = H5Pcreate(H5P_OBJECT_COPY)) < 0) TEST_ERROR
+
+ /* set options for object copy */
+ if(H5Pset_copy_object(pid, flag) < 0) TEST_ERROR
+
+ /* Verify object copy flags */
+ if(H5Pget_copy_object(pid, &cpy_flags) < 0) TEST_ERROR
+ if(cpy_flags != flag) TEST_ERROR
+
+ /* copy the group from SRC to DST */
+ if(crt_intermediate_grp) {
+ /* Create link creation plist to pass in intermediate group creation */
+ if((lcpl_id = H5Pcreate(H5P_LINK_CREATE)) < 0) TEST_ERROR
+ if(H5Pset_create_intermediate_group(lcpl_id, TRUE) < 0) TEST_ERROR
+
+ if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, "/new_g0/new_g00", pid, lcpl_id) < 0) TEST_ERROR
+
+ if(H5Pclose(lcpl_id) < 0) TEST_ERROR
+
+ /* open the group for copy */
+ if((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
+
+ /* open the destination group */
+ if((gid2 = H5Gopen2(fid_dst, "/new_g0/new_g00", H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
+
+ } else if(((flag & H5O_COPY_EXPAND_SOFT_LINK_FLAG) > 0)
+ || ((flag & H5O_COPY_EXPAND_EXT_LINK_FLAG) > 0)) {
+ if(H5Ocopy(fid_src, NAME_GROUP_LINK, fid_dst, NAME_GROUP_LINK, pid, H5P_DEFAULT) < 0) TEST_ERROR
+
+ if((flag & H5O_COPY_EXPAND_SOFT_LINK_FLAG) > 0)
+ /* Unlink dataset to copy from original location */
+ /* (So group comparison works properly) */
+ if(H5Ldelete(fid_src, NAME_DATASET_SUB_SUB, H5P_DEFAULT) < 0) FAIL_STACK_ERROR
+
+ /* open the group for copy */
+ if((gid = H5Gopen2(fid_src, NAME_GROUP_LINK2, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
+
+ /* open the destination group */
+ if((gid2 = H5Gopen2(fid_dst, NAME_GROUP_LINK, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
+
+ } else if(flag & (H5O_COPY_WITHOUT_ATTR_FLAG | H5O_COPY_PRESERVE_NULL_FLAG)) {
+ if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, pid, H5P_DEFAULT) < 0) TEST_ERROR
+
+ /* open the group for copy */
+ if((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
+
+ /* open the destination group */
+ if((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
+ } else if(flag & H5O_COPY_SHALLOW_HIERARCHY_FLAG) {
+ if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, pid, H5P_DEFAULT) < 0) TEST_ERROR
+
+ /* open the group for copy */
+ if((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
+
+ /* open the destination group */
+ if((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
+
+ /* Set the copy depth */
+ depth = 1;
+ } else if((flag & H5O_COPY_EXPAND_REFERENCE_FLAG) > 0) {
+ if(H5Ocopy(fid_src, NAME_GROUP_REF, fid_dst, NAME_GROUP_REF, pid, H5P_DEFAULT) < 0) TEST_ERROR
+
+ /* open the group for copy */
+ if((gid = H5Gopen2(fid_src, NAME_GROUP_REF, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
+
+ /* open the destination group */
+ if((gid2 = H5Gopen2(fid_dst, NAME_GROUP_REF, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
+ } else {
+ /* Unknown flag */
+ TEST_ERROR
+ } /* end else */
+
+ /* Check if the groups are equal */
+ if(compare_groups(gid, gid2, pid, depth, flag) != TRUE) TEST_ERROR
+ if(H5Gclose(gid2) < 0) TEST_ERROR
+ if(H5Gclose(gid) < 0) TEST_ERROR
+
+ /* close the SRC file */
+ if(H5Fclose(fid_src) < 0) TEST_ERROR
+
+ /* close the DST file */
+ if(H5Fclose(fid_dst) < 0) TEST_ERROR
+
+ /* close properties */
+ if(H5Pclose(pid) < 0) TEST_ERROR
+
+ PASSED();
+ return 0;
+
+error:
+ H5E_BEGIN_TRY {
+ H5Pclose(lcpl_id);
+ H5Pclose(pid);
+ H5Sclose(sid);
+ H5Dclose(did);
+ H5Gclose(gid_ref);
+ H5Gclose(gid_sub);
+ H5Gclose(gid2);
+ H5Gclose(gid);
+ H5Fclose(fid_dst);
+ H5Fclose(fid_src);
+ H5Fclose(fid_ext);
+ } H5E_END_TRY;
+ return 1;
+} /* end test_copy_option */
+
+/*-------------------------------------------------------------------------
+ * Function: main
+ *
+ * Purpose: Test H5Ocopy()
+ *
+ * Tests a number of cases: messages can be stored in the
+ * new or old format, messages can be shared in either,
+ * both, or neither of the source and destination files.
+ *
+ * Return: EXIT_SUCCESS/EXIT_FAILURE
+ *
+ * Programmer: Peter Cao
+ * Friday, September 30, 2005
+ *
+ *-------------------------------------------------------------------------
+ */
+int
+main(void)
+{
+ int nerrors = 0;
+ hid_t fapl, fapl2;
+ hid_t fcpl_shared, ocpl;
+ unsigned max_compact, min_dense;
+ int configuration; /* Configuration of tests. */
+ int ExpressMode;
+ hbool_t same_file; /* Whether to run tests that only use one file */
+
+ /* Setup */
+ h5_reset();
+ fapl = h5_fileaccess();
+
+ ExpressMode = GetTestExpress();
+ if (ExpressMode > 1)
+ HDprintf("***Express test mode on. Some tests may be skipped\n");
+
+ /* Copy the file access property list */
+ if((fapl2 = H5Pcopy(fapl)) < 0) TEST_ERROR
+
+ /* Set the "use the latest version of the format" bounds for creating objects in the file */
+ if(H5Pset_libver_bounds(fapl2, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0) TEST_ERROR
+
+ /* Create an FCPL with sharing enabled */
+ if((fcpl_shared = H5Pcreate(H5P_FILE_CREATE)) < 0) TEST_ERROR
+ if(H5Pset_shared_mesg_nindexes(fcpl_shared, 1) < 0) TEST_ERROR
+ if(H5Pset_shared_mesg_index(fcpl_shared, 0, H5O_SHMESG_ALL_FLAG, 10) < 0) TEST_ERROR
+
+ /* Obtain the default attribute storage phase change values */
+ if((ocpl = H5Pcreate(H5P_OBJECT_CREATE)) < 0) TEST_ERROR
+ if(H5Pget_attr_phase_change(ocpl, &max_compact, &min_dense) < 0) TEST_ERROR
+ if(H5Pclose(ocpl) < 0) TEST_ERROR
+
+ /* Test in all configurations */
+ for(configuration = 0; configuration <= MAX_CONFIGURATION; configuration++) {
+ hid_t src_fapl;
+ hid_t dst_fapl;
+ hid_t fcpl_src;
+ hid_t fcpl_dst;
+
+ /* Start with same_file == TRUE. Use source file settings for these
+ * tests. Don't run with a non-default destination file setting, as
+ * destination settings have no effect. */
+ same_file = TRUE;
+
+ /* No need to test dense attributes with old format */
+ if(!(configuration & CONFIG_SRC_NEW_FORMAT) && (configuration & CONFIG_DENSE))
+ continue;
+
+ /* TODO Region references currently do not support copy from new format to old format
+ * (this may be fixed once H5Sencode/decode and H5CXis fixed) */
+ if((configuration & CONFIG_SRC_NEW_FORMAT) && !(configuration & CONFIG_DST_NEW_FORMAT))
+ continue;
+
+ /* Test with and without shared messages */
+ if(configuration & CONFIG_SHARE_SRC) {
+ HDputs("\nTesting with shared src messages:");
+ fcpl_src = fcpl_shared;
+ }
+ else {
+ HDputs("\nTesting without shared src messages:");
+ fcpl_src = H5P_DEFAULT;
+ }
+ if(configuration & CONFIG_SHARE_DST) {
+ HDputs("Testing with shared dst messages:");
+ fcpl_dst = fcpl_shared;
+ same_file = FALSE;
+ }
+ else {
+ HDputs("Testing without shared dst messages:");
+ fcpl_dst = H5P_DEFAULT;
+ }
+
+ /* Set the FAPL for the source file's type of format */
+ if(configuration & CONFIG_SRC_NEW_FORMAT) {
+ HDputs("Testing with latest format for source file:");
+ src_fapl = fapl2;
+
+ /* Test with and without dense attributes */
+ if(configuration & CONFIG_DENSE) {
+ HDputs("Testing with dense attributes:");
+ num_attributes_g = max_compact + 1;
+ }
+ else {
+ HDputs("Testing without dense attributes:");
+ num_attributes_g = MAX(min_dense, 2) - 2;
+ }
+ } /* end if */
+ else {
+ HDputs("Testing with oldest file format for source file:");
+ src_fapl = fapl;
+ num_attributes_g = 4;
+ } /* end else */
+
+ /* Set the FAPL for the destination file's type of format */
+ if(configuration & CONFIG_DST_NEW_FORMAT) {
+ HDputs("Testing with latest format for destination file:");
+ dst_fapl = fapl2;
+ same_file = FALSE;
+ } /* end if */
+ else {
+ HDputs("Testing with oldest file format for destination file:");
+ dst_fapl = fapl;
+ } /* end else */
+
+ /* The tests... */
+ nerrors += test_copy_option(fcpl_src, fcpl_dst, src_fapl, dst_fapl,
+ H5O_COPY_EXPAND_REFERENCE_FLAG,
+ FALSE, "H5Ocopy(): expand object reference");
+ } /* end for */
+
+ /* Reset file address checking info */
+ addr_reset();
+
+ /* Verify symbol table messages are cached */
+ nerrors += (h5_verify_cached_stabs(FILENAME, fapl) < 0 ? 1 : 0);
+
+ /* Results */
+ if(nerrors) {
+ HDprintf("***** %d OBJECT COPY TEST%s FAILED! *****\n",
+ nerrors, (1 == nerrors ? "" : "S"));
+ HDexit(EXIT_FAILURE);
+ } /* end if */
+
+ HDputs ("All object copying tests passed.");
+
+ /* close property list.
+ * NOTE: if this property list is not closed and the test is
+ * run with the split or multi driver, an interesting
+ * problem is exposed in the property list shutdown code.
+ *
+ * Namely, since the split/multi driver copies property
+ * lists for internal use, there's a (high) chance that
+ * leaving the FAPL open and having the library's shutdown
+ * code close it will cause the underlying property lists
+ * to be cleaned up first, causing the actual property list
+ * close operation to fail (since it won't be able to close
+ * the already closed underlying property list).
+ *
+ * The could be addressed by converting the split/multi to
+ * use non-public API routines, or putting some way into the
+ * public H5I routines to indicate ordering at shutdown.
+ *
+ * For now, we just make certain to close the property list.
+ * (QAK - 2016/04/06)
+ *
+ */
+ H5Pclose(fapl2);
+
+ h5_cleanup(FILENAME, fapl);
+
+ HDexit(EXIT_SUCCESS);
+
+error:
+ HDexit(EXIT_FAILURE);
+} /* main */
+
diff --git a/test/testhdf5.c b/test/testhdf5.c
index e136086..72acf6c 100644
--- a/test/testhdf5.c
+++ b/test/testhdf5.c
@@ -57,7 +57,8 @@ main(int argc, char *argv[])
AddTest("attr", test_attr, cleanup_attr, "Attributes", NULL);
AddTest("select", test_select, cleanup_select, "Selections", NULL);
AddTest("time", test_time, cleanup_time, "Time Datatypes", NULL);
- AddTest("reference", test_reference, cleanup_reference, "References", NULL);
+ AddTest("ref_deprec", test_reference_deprec, cleanup_reference_deprec, "Deprecated References", NULL);
+ AddTest("ref", test_reference, cleanup_reference, "References", NULL);
AddTest("vltypes", test_vltypes, cleanup_vltypes, "Variable-Length Datatypes", NULL);
AddTest("vlstrings", test_vlstrings, cleanup_vlstrings, "Variable-Length Strings", NULL);
AddTest("iterate", test_iterate, cleanup_iterate, "Group & Attribute Iteration", NULL);
diff --git a/test/testhdf5.h b/test/testhdf5.h
index ef3b784..6b13cae 100644
--- a/test/testhdf5.h
+++ b/test/testhdf5.h
@@ -192,6 +192,7 @@ void test_attr(void);
void test_select(void);
void test_time(void);
void test_reference(void);
+void test_reference_deprec(void);
void test_vltypes(void);
void test_vlstrings(void);
void test_iterate(void);
@@ -215,6 +216,7 @@ void cleanup_attr(void);
void cleanup_select(void);
void cleanup_time(void);
void cleanup_reference(void);
+void cleanup_reference_deprec(void);
void cleanup_vltypes(void);
void cleanup_vlstrings(void);
void cleanup_iterate(void);
diff --git a/test/trefer.c b/test/trefer.c
index 7158984..7d87ea9 100644
--- a/test/trefer.c
+++ b/test/trefer.c
@@ -21,9 +21,16 @@
#include "testhdf5.h"
-#define FILE1 "trefer1.h5"
-#define FILE2 "trefer2.h5"
-#define FILE3 "trefer3.h5"
+#define FILE_REF_PARAM "trefer_param.h5"
+#define FILE_REF_OBJ "trefer_obj.h5"
+#define FILE_REF_REG "trefer_reg.h5"
+#define FILE_REF_REG_1D "trefer_reg_1d.h5"
+#define FILE_REF_OBJ_DEL "trefer_obj_del.h5"
+#define FILE_REF_GRP "trefer_grp.h5"
+#define FILE_REF_ATTR "trefer_attr.h5"
+#define FILE_REF_EXT1 "trefer_ext1.h5"
+#define FILE_REF_EXT2 "trefer_ext2.h5"
+#define FILE_REF_COMPAT "trefer_compat.h5"
/* 1-D dataset with fixed dimensions */
#define SPACE1_RANK 1
@@ -55,6 +62,10 @@ typedef struct s1_t {
#define DSETNAME2 "dset2"
#define NAME_SIZE 16
+#define MAX_ITER_CREATE 1000
+#define MAX_ITER_WRITE MAX_ITER_CREATE
+#define MAX_ITER_READ MAX_ITER_CREATE
+
/****************************************************************
**
@@ -65,47 +76,57 @@ typedef struct s1_t {
static void
test_reference_params(void)
{
- hid_t fid1; /* HDF5 File IDs */
- hid_t dataset, /* Dataset ID */
- dset2; /* Dereferenced dataset ID */
- hid_t group; /* Group ID */
- hid_t sid1; /* Dataspace ID */
- hid_t tid1; /* Datatype ID */
- hid_t dapl_id; /* Dataset access property list */
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t dataset, /* Dataset ID */
+ dset2; /* Dereferenced dataset ID */
+ hid_t group; /* Group ID */
+ hid_t attr; /* Attribute ID */
+ hid_t sid1; /* Dataspace ID */
+ hid_t tid1; /* Datatype ID */
+ hid_t aapl_id; /* Attribute access property list */
+ hid_t dapl_id; /* Dataset access property list */
hsize_t dims1[] = {SPACE1_DIM1};
- hobj_ref_t *wbuf, /* buffer to write to disk */
- *rbuf, /* buffer read from disk */
- *tbuf; /* temp. buffer read from disk */
+ H5R_ref_t *wbuf, /* buffer to write to disk */
+ *rbuf, /* buffer read from disk */
+ *tbuf; /* temp. buffer read from disk */
+ H5R_type_t type; /* Reference type */
unsigned *tu32; /* Temporary pointer to uint32 data */
- int i; /* counting variables */
- const char *write_comment = "Foo!"; /* Comments for group */
- hid_t ret_id; /* Generic hid_t return value */
- ssize_t name_size; /* Size of reference name */
- herr_t ret; /* Generic return value */
+ int i; /* Counters */
+ const char *write_comment = "Foo!"; /* Comments for group */
+ hid_t ret_id; /* Generic hid_t return value */
+ ssize_t name_size; /* Size of reference name */
+ herr_t ret; /* Generic return value */
/* Output message about test being performed */
MESSAGE(5, ("Testing Reference Parameters\n"));
/* Allocate write & read buffers */
- wbuf = (hobj_ref_t *)HDmalloc(MAX(sizeof(unsigned), sizeof(hobj_ref_t)) * SPACE1_DIM1);
- rbuf = (hobj_ref_t *)HDmalloc(MAX(sizeof(unsigned), sizeof(hobj_ref_t)) * SPACE1_DIM1);
- tbuf = (hobj_ref_t *)HDmalloc(MAX(sizeof(unsigned), sizeof(hobj_ref_t)) * SPACE1_DIM1);
+ wbuf = (H5R_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(H5R_ref_t)), SPACE1_DIM1);
+ rbuf = (H5R_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(H5R_ref_t)), SPACE1_DIM1);
+ tbuf = (H5R_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(H5R_ref_t)), SPACE1_DIM1);
+
+ for(tu32 = (unsigned *)wbuf, i = 0; i < SPACE1_DIM1; i++)
+ *tu32++ = (unsigned)i * 3;
/* Create file */
- fid1 = H5Fcreate(FILE1, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(fid1, FAIL, "H5Fcreate");
+ fid1 = H5Fcreate(FILE_REF_PARAM, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(fid1, H5I_INVALID_HID, "H5Fcreate");
/* Create dataspace for datasets */
sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL);
- CHECK(sid1, FAIL, "H5Screate_simple");
+ CHECK(sid1, H5I_INVALID_HID, "H5Screate_simple");
+
+ /* Create attribute access property list */
+ aapl_id = H5Pcreate(H5P_ATTRIBUTE_ACCESS);
+ CHECK(aapl_id, H5I_INVALID_HID, "H5Pcreate");
/* Create dataset access property list */
dapl_id = H5Pcreate(H5P_DATASET_ACCESS);
- CHECK(dapl_id, FAIL, "H5Pcreate");
+ CHECK(dapl_id, H5I_INVALID_HID, "H5Pcreate");
/* Create a group */
group = H5Gcreate2(fid1, "Group1", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(group, FAIL, "H5Gcreate2");
+ CHECK(group, H5I_INVALID_HID, "H5Gcreate2");
/* Set group's comment */
ret = H5Oset_comment(group, write_comment);
@@ -113,10 +134,7 @@ test_reference_params(void)
/* Create a dataset (inside Group1) */
dataset = H5Dcreate2(group, "Dataset1", H5T_NATIVE_UINT, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(dataset, FAIL, "H5Dcreate2");
-
- for(tu32 = (unsigned *)wbuf, i = 0; i < SPACE1_DIM1; i++)
- *tu32++ = (unsigned)i * 3;
+ CHECK(dataset, H5I_INVALID_HID, "H5Dcreate2");
/* Write selection to disk */
ret = H5Dwrite(dataset, H5T_NATIVE_UINT, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf);
@@ -128,7 +146,19 @@ test_reference_params(void)
/* Create another dataset (inside Group1) */
dataset = H5Dcreate2(group, "Dataset2", H5T_NATIVE_UCHAR, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(dataset, FAIL, "H5Dcreate2");
+ CHECK(dataset, H5I_INVALID_HID, "H5Dcreate2");
+
+ /* Create an attribute for the dataset */
+ attr = H5Acreate2(dataset, "Attr", H5T_NATIVE_UINT, sid1, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(attr, H5I_INVALID_HID, "H5Acreate2");
+
+ /* Write attribute to disk */
+ ret = H5Awrite(attr, H5T_NATIVE_UINT, wbuf);
+ CHECK(ret, FAIL, "H5Awrite");
+
+ /* Close attribute */
+ ret = H5Aclose(attr);
+ CHECK(ret, FAIL, "H5Aclose");
/* Close Dataset */
ret = H5Dclose(dataset);
@@ -136,7 +166,7 @@ test_reference_params(void)
/* Create a datatype to refer to */
tid1 = H5Tcreate(H5T_COMPOUND, sizeof(s1_t));
- CHECK(tid1, FAIL, "H5Tcreate");
+ CHECK(tid1, H5I_INVALID_HID, "H5Tcreate");
/* Insert fields */
ret = H5Tinsert(tid1, "a", HOFFSET(s1_t,a), H5T_NATIVE_INT);
@@ -161,58 +191,88 @@ test_reference_params(void)
CHECK(ret, FAIL, "H5Gclose");
/* Create a dataset */
- dataset = H5Dcreate2(fid1, "Dataset3", H5T_STD_REF_OBJ, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(ret, FAIL, "H5Dcreate2");
-
- /* Test parameters to H5Rcreate */
- ret = H5Rcreate(NULL, fid1, "/Group1/Dataset1", H5R_OBJECT, (hid_t)-1);
- VERIFY(ret, FAIL, "H5Rcreate ref");
- ret = H5Rcreate(&wbuf[0], (hid_t)-1, "/Group1/Dataset1", H5R_OBJECT, (hid_t)-1);
- VERIFY(ret, FAIL, "H5Rcreate loc_id");
- ret = H5Rcreate(&wbuf[0], fid1, NULL, H5R_OBJECT, (hid_t)-1);
- VERIFY(ret, FAIL, "H5Rcreate name");
- ret = H5Rcreate(&wbuf[0], fid1, "", H5R_OBJECT, (hid_t)-1);
- VERIFY(ret, FAIL, "H5Rcreate null name");
- ret = H5Rcreate(&wbuf[0], fid1, "/Group1/Dataset1", H5R_MAXTYPE, (hid_t)-1);
- VERIFY(ret, FAIL, "H5Rcreate type");
- ret = H5Rcreate(&wbuf[0], fid1, "/Group1/Dataset1", H5R_DATASET_REGION, (hid_t)-1);
- VERIFY(ret, FAIL, "H5Rcreate region space");
- ret = H5Rcreate(&wbuf[0], fid1, "/Group1/Dataset1", H5R_MAXTYPE, (hid_t)0);
- VERIFY(ret, FAIL, "H5Rcreate space");
-
- /* Test parameters to H5Rdereference */
- dset2 = H5Rdereference2((hid_t)-1, H5P_DEFAULT, H5R_OBJECT, &rbuf[0]);
- VERIFY(dset2, FAIL, "H5Rdereference2 loc_id");
- dset2 = H5Rdereference2(dataset, (hid_t)-1, H5R_OBJECT, &rbuf[0]);
- VERIFY(dset2, FAIL, "H5Rdereference2 oapl_id");
- dset2 = H5Rdereference2(dataset, dapl_id, H5R_OBJECT, NULL);
- VERIFY(dset2, FAIL, "H5Rdereference2 ref");
- dset2 = H5Rdereference2(dataset, dapl_id, H5R_MAXTYPE, &rbuf[0]);
- VERIFY(dset2, FAIL, "H5Rdereference2 type");
-
- /* Test parameters to H5Rget_obj_type2 */
- ret = H5Rget_obj_type2((hid_t)-1, H5R_OBJECT, &rbuf[0], NULL);
- VERIFY(ret, FAIL, "H5Rget_obj_type2 loc_id");
- ret = H5Rget_obj_type2(fid1, H5R_OBJECT, NULL, NULL);
- VERIFY(ret, FAIL, "H5Rget_obj_type2 ref");
- ret = H5Rget_obj_type2(fid1, H5R_MAXTYPE, &rbuf[0], NULL);
- VERIFY(ret, FAIL, "H5Rget_obj_type2 type");
-
- /* Test parameters to H5Rget_name */
- name_size = H5Rget_name((hid_t)-1, H5R_DATASET_REGION, &rbuf[0], NULL, 0);
- VERIFY(name_size, FAIL, "H5Rget_name loc_id");
- name_size = H5Rget_name(fid1, H5R_DATASET_REGION, NULL, NULL, 0);
- VERIFY(name_size, FAIL, "H5Rget_name ref");
- name_size = H5Rget_name(fid1, H5R_MAXTYPE, &rbuf[0], NULL, 0);
- VERIFY(name_size, FAIL, "H5Rget_name type");
-
- /* Test parameters to H5Rget_region */
- ret_id = H5Rget_region((hid_t)-1, H5R_OBJECT, &rbuf[0]);
- VERIFY(ret_id, FAIL, "H5Rget_region loc_id");
- ret_id = H5Rget_region(fid1, H5R_OBJECT, NULL);
- VERIFY(ret_id, FAIL, "H5Rget_region ref");
- ret_id = H5Rget_region(fid1, H5R_OBJECT, &rbuf[0]);
- VERIFY(ret_id, FAIL, "H5Rget_region type");
+ dataset = H5Dcreate2(fid1, "Dataset3", H5T_STD_REF, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(ret, H5I_INVALID_HID, "H5Dcreate2");
+
+ /* Test parameters to H5Rcreate_object */
+ ret = H5Rcreate_object(fid1, "/Group1/Dataset1", NULL);
+ VERIFY(ret, FAIL, "H5Rcreate_object ref");
+ ret = H5Rcreate_object(H5I_INVALID_HID, "/Group1/Dataset1", &wbuf[0]);
+ VERIFY(ret, FAIL, "H5Rcreate_object loc_id");
+ ret = H5Rcreate_object(fid1, NULL, &wbuf[0]);
+ VERIFY(ret, FAIL, "H5Rcreate_object name");
+ ret = H5Rcreate_object(fid1, "", &wbuf[0]);
+ VERIFY(ret, FAIL, "H5Rcreate_object null name");
+
+ /* Test parameters to H5Rcreate_region */
+ ret = H5Rcreate_region(fid1, "/Group1/Dataset1", sid1, NULL);
+ VERIFY(ret, FAIL, "H5Rcreate_region ref");
+ ret = H5Rcreate_region(H5I_INVALID_HID, "/Group1/Dataset1", sid1, &wbuf[0]);
+ VERIFY(ret, FAIL, "H5Rcreate_region loc_id");
+ ret = H5Rcreate_region(fid1, NULL, sid1, &wbuf[0]);
+ VERIFY(ret, FAIL, "H5Rcreate_region name");
+ ret = H5Rcreate_region(fid1, "/Group1/Dataset1", H5I_INVALID_HID, &wbuf[0]);
+ VERIFY(ret, FAIL, "H5Rcreate_region dataspace");
+
+ /* Test parameters to H5Rcreate_attr */
+ ret = H5Rcreate_attr(fid1, "/Group1/Dataset2", "Attr", NULL);
+ VERIFY(ret, FAIL, "H5Rcreate_attr ref");
+ ret = H5Rcreate_attr(H5I_INVALID_HID, "/Group1/Dataset2", "Attr", &wbuf[0]);
+ VERIFY(ret, FAIL, "H5Rcreate_attr loc_id");
+ ret = H5Rcreate_attr(fid1, NULL, "Attr", &wbuf[0]);
+ VERIFY(ret, FAIL, "H5Rcreate_attr name");
+ ret = H5Rcreate_attr(fid1, "/Group1/Dataset2", NULL, &wbuf[0]);
+ VERIFY(ret, FAIL, "H5Rcreate_attr attr_name");
+
+ /* Test parameters to H5Rdestroy */
+ ret = H5Rdestroy(NULL);
+ VERIFY(ret, FAIL, "H5Rdestroy");
+
+ /* Test parameters to H5Rget_type */
+ type = H5Rget_type(NULL);
+ VERIFY(type, H5R_BADTYPE, "H5Rget_type ref");
+
+ /* Test parameters to H5Requal */
+ ret = H5Requal(NULL, (const H5R_ref_t *)&rbuf[0]);
+ VERIFY(ret, FAIL, "H5Requal ref1");
+ ret = H5Requal((const H5R_ref_t *)&rbuf[0], NULL);
+ VERIFY(ret, FAIL, "H5Requal ref2");
+
+ /* Test parameters to H5Rcopy */
+ ret = H5Rcopy(NULL, &wbuf[0]);
+ VERIFY(ret, FAIL, "H5Rcopy src_ref");
+ ret = H5Rcopy((const H5R_ref_t *)&rbuf[0], NULL);
+ VERIFY(ret, FAIL, "H5Rcopy dest_ref");
+
+ /* Test parameters to H5Ropen_object */
+ dset2 = H5Ropen_object((const H5R_ref_t *)&rbuf[0], H5I_INVALID_HID, H5I_INVALID_HID);
+ VERIFY(dset2, FAIL, "H5Ropen_object oapl_id");
+ dset2 = H5Ropen_object(NULL, H5P_DEFAULT, dapl_id);
+ VERIFY(dset2, FAIL, "H5Ropen_object ref");
+
+ /* Test parameters to H5Ropen_region */
+ ret_id = H5Ropen_region(NULL, H5I_INVALID_HID, H5I_INVALID_HID);
+ VERIFY(ret_id, H5I_INVALID_HID, "H5Ropen_region ref");
+
+ /* Test parameters to H5Ropen_attr */
+ ret_id = H5Ropen_attr(NULL, H5P_DEFAULT, aapl_id);
+ VERIFY(ret_id, H5I_INVALID_HID, "H5Ropen_attr ref");
+
+ /* Test parameters to H5Rget_obj_type3 */
+ ret = H5Rget_obj_type3(NULL, H5P_DEFAULT, NULL);
+ VERIFY(ret, FAIL, "H5Rget_obj_type3 ref");
+
+ /* Test parameters to H5Rget_file_name */
+ name_size = H5Rget_file_name(NULL, NULL, 0);
+ VERIFY(name_size, (-1), "H5Rget_file_name ref");
+
+ /* Test parameters to H5Rget_obj_name */
+ name_size = H5Rget_obj_name(NULL, H5P_DEFAULT, NULL, 0);
+ VERIFY(name_size, (-1), "H5Rget_obj_name ref");
+
+ /* Test parameters to H5Rget_attr_name */
+ name_size = H5Rget_attr_name(NULL, NULL, 0);
+ VERIFY(name_size, (-1), "H5Rget_attr_name ref");
/* Close disk dataspace */
ret = H5Sclose(sid1);
@@ -222,6 +282,10 @@ test_reference_params(void)
ret = H5Pclose(dapl_id);
CHECK(ret, FAIL, "H5Pclose");
+ /* Close attribute access property list */
+ ret = H5Pclose(aapl_id);
+ CHECK(ret, FAIL, "H5Pclose");
+
/* Close Dataset */
ret = H5Dclose(dataset);
CHECK(ret, FAIL, "H5Dclose");
@@ -234,7 +298,7 @@ test_reference_params(void)
HDfree(wbuf);
HDfree(rbuf);
HDfree(tbuf);
-} /* test_reference_obj() */
+} /* test_reference_params() */
/****************************************************************
**
@@ -245,60 +309,52 @@ test_reference_params(void)
static void
test_reference_obj(void)
{
- hid_t fid1; /* HDF5 File IDs */
- hid_t dataset, /* Dataset ID */
- dset2; /* Dereferenced dataset ID */
- hid_t group; /* Group ID */
- hid_t sid1; /* Dataspace ID */
- hid_t tid1; /* Datatype ID */
- hsize_t dims1[] = {SPACE1_DIM1};
- hid_t dapl_id; /* Dataset access property list */
- hobj_ref_t *wbuf, /* buffer to write to disk */
- *rbuf, /* buffer read from disk */
- *tbuf; /* temp. buffer read from disk */
- hobj_ref_t nvrbuf[3]={0,101,1000000000}; /* buffer with non-valid refs */
- unsigned *tu32; /* Temporary pointer to uint32 data */
- int i, j; /* counting variables */
- const char *write_comment="Foo!"; /* Comments for group */
- char read_comment[10];
- H5O_type_t obj_type; /* Object type */
- ssize_t size; /* Comment length */
- herr_t ret; /* Generic return value */
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t dataset, /* Dataset ID */
+ dset2; /* Dereferenced dataset ID */
+ hid_t group; /* Group ID */
+ hid_t sid1; /* Dataspace ID */
+ hid_t tid1; /* Datatype ID */
+ hsize_t dims1[] = {SPACE1_DIM1};
+ hid_t dapl_id; /* Dataset access property list */
+ H5R_ref_t *wbuf, /* buffer to write to disk */
+ *rbuf, /* buffer read from disk */
+ *tbuf; /* temp. buffer read from disk */
+ unsigned *tu32; /* Temporary pointer to uint32 data */
+ int i, j; /* Counters */
+ H5O_type_t obj_type; /* Object type */
+ herr_t ret; /* Generic return value */
/* Output message about test being performed */
MESSAGE(5, ("Testing Object Reference Functions\n"));
/* Allocate write & read buffers */
- wbuf = (hobj_ref_t *)HDmalloc(MAX(sizeof(unsigned), sizeof(hobj_ref_t)) * SPACE1_DIM1);
- rbuf = (hobj_ref_t *)HDmalloc(MAX(sizeof(unsigned), sizeof(hobj_ref_t)) * SPACE1_DIM1);
- tbuf = (hobj_ref_t *)HDmalloc(MAX(sizeof(unsigned), sizeof(hobj_ref_t)) * SPACE1_DIM1);
+ wbuf = (H5R_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(H5R_ref_t)), SPACE1_DIM1);
+ rbuf = (H5R_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(H5R_ref_t)), SPACE1_DIM1);
+ tbuf = (H5R_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(H5R_ref_t)), SPACE1_DIM1);
+
+ for(tu32 = (unsigned *)wbuf, i = 0; i < SPACE1_DIM1; i++)
+ *tu32++ = (unsigned)i * 3;
/* Create file */
- fid1 = H5Fcreate(FILE1, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(fid1, FAIL, "H5Fcreate");
+ fid1 = H5Fcreate(FILE_REF_OBJ, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(fid1, H5I_INVALID_HID, "H5Fcreate");
/* Create dataspace for datasets */
sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL);
- CHECK(sid1, FAIL, "H5Screate_simple");
+ CHECK(sid1, H5I_INVALID_HID, "H5Screate_simple");
/* Create dataset access property list */
dapl_id = H5Pcreate(H5P_DATASET_ACCESS);
- CHECK(dapl_id, FAIL, "H5Pcreate");
+ CHECK(dapl_id, H5I_INVALID_HID, "H5Pcreate");
/* Create a group */
group = H5Gcreate2(fid1, "Group1", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(group, FAIL, "H5Gcreate2");
-
- /* Set group's comment */
- ret = H5Oset_comment(group, write_comment);
- CHECK(ret, FAIL, "H5Oset_comment");
+ CHECK(group, H5I_INVALID_HID, "H5Gcreate2");
/* Create a dataset (inside Group1) */
dataset = H5Dcreate2(group, "Dataset1", H5T_NATIVE_UINT, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(dataset, FAIL, "H5Dcreate2");
-
- for(tu32 = (unsigned *)wbuf, i = 0; i < SPACE1_DIM1; i++)
- *tu32++ = (unsigned)i * 3;
+ CHECK(dataset, H5I_INVALID_HID, "H5Dcreate2");
/* Write selection to disk */
ret = H5Dwrite(dataset, H5T_NATIVE_UINT, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf);
@@ -318,7 +374,7 @@ test_reference_obj(void)
/* Create a datatype to refer to */
tid1 = H5Tcreate(H5T_COMPOUND, sizeof(s1_t));
- CHECK(tid1, FAIL, "H5Tcreate");
+ CHECK(tid1, H5I_INVALID_HID, "H5Tcreate");
/* Insert fields */
ret = H5Tinsert(tid1, "a", HOFFSET(s1_t,a), H5T_NATIVE_INT);
@@ -343,39 +399,39 @@ test_reference_obj(void)
CHECK(ret, FAIL, "H5Gclose");
/* Create a dataset */
- dataset = H5Dcreate2(fid1, "Dataset3", H5T_STD_REF_OBJ, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(ret, FAIL, "H5Dcreate2");
+ dataset = H5Dcreate2(fid1, "Dataset3", H5T_STD_REF, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, H5I_INVALID_HID, "H5Dcreate2");
/* Create reference to dataset */
- ret = H5Rcreate(&wbuf[0], fid1, "/Group1/Dataset1", H5R_OBJECT, (hid_t)-1);
- CHECK(ret, FAIL, "H5Rcreate");
- ret = H5Rget_obj_type2(dataset, H5R_OBJECT, &wbuf[0], &obj_type);
- CHECK(ret, FAIL, "H5Rget_obj_type2");
- VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type2");
+ ret = H5Rcreate_object(fid1, "/Group1/Dataset1", &wbuf[0]);
+ CHECK(ret, FAIL, "H5Rcreate_object");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&wbuf[0], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
/* Create reference to dataset */
- ret = H5Rcreate(&wbuf[1], fid1, "/Group1/Dataset2", H5R_OBJECT, (hid_t)-1);
- CHECK(ret, FAIL, "H5Rcreate");
- ret = H5Rget_obj_type2(dataset, H5R_OBJECT, &wbuf[1], &obj_type);
- CHECK(ret, FAIL, "H5Rget_obj_type2");
- VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type2");
+ ret = H5Rcreate_object(fid1, "/Group1/Dataset2", &wbuf[1]);
+ CHECK(ret, FAIL, "H5Rcreate_object");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&wbuf[1], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
/* Create reference to group */
- ret = H5Rcreate(&wbuf[2], fid1, "/Group1", H5R_OBJECT, (hid_t)-1);
- CHECK(ret, FAIL, "H5Rcreate");
- ret = H5Rget_obj_type2(dataset, H5R_OBJECT, &wbuf[2], &obj_type);
- CHECK(ret, FAIL, "H5Rget_obj_type2");
- VERIFY(obj_type, H5O_TYPE_GROUP, "H5Rget_obj_type2");
+ ret = H5Rcreate_object(fid1, "/Group1", &wbuf[2]);
+ CHECK(ret, FAIL, "H5Rcreate_object");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&wbuf[2], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_GROUP, "H5Rget_obj_type3");
/* Create reference to named datatype */
- ret = H5Rcreate(&wbuf[3], fid1, "/Group1/Datatype1", H5R_OBJECT, (hid_t)-1);
- CHECK(ret, FAIL, "H5Rcreate");
- ret = H5Rget_obj_type2(dataset, H5R_OBJECT, &wbuf[3], &obj_type);
- CHECK(ret, FAIL, "H5Rget_obj_type2");
- VERIFY(obj_type, H5O_TYPE_NAMED_DATATYPE, "H5Rget_obj_type2");
+ ret = H5Rcreate_object(fid1, "/Group1/Datatype1", &wbuf[3]);
+ CHECK(ret, FAIL, "H5Rcreate_object");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&wbuf[3], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_NAMED_DATATYPE, "H5Rget_obj_type3");
/* Write selection to disk */
- ret = H5Dwrite(dataset, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf);
+ ret = H5Dwrite(dataset, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf);
CHECK(ret, FAIL, "H5Dwrite");
/* Close disk dataspace */
@@ -391,27 +447,27 @@ test_reference_obj(void)
CHECK(ret, FAIL, "H5Fclose");
/* Re-open the file */
- fid1 = H5Fopen(FILE1, H5F_ACC_RDWR, H5P_DEFAULT);
- CHECK(fid1, FAIL, "H5Fopen");
+ fid1 = H5Fopen(FILE_REF_OBJ, H5F_ACC_RDWR, H5P_DEFAULT);
+ CHECK(fid1, H5I_INVALID_HID, "H5Fopen");
/* Open the dataset */
dataset = H5Dopen2(fid1, "/Dataset3", H5P_DEFAULT);
- CHECK(ret, FAIL, "H5Dopen2");
+ CHECK(dataset, H5I_INVALID_HID, "H5Dopen2");
/* Read selection from disk */
- ret = H5Dread(dataset, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf);
+ ret = H5Dread(dataset, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf);
CHECK(ret, FAIL, "H5Dread");
/* Open dataset object */
- dset2 = H5Rdereference2(dataset, dapl_id, H5R_OBJECT, &rbuf[0]);
- CHECK(dset2, FAIL, "H5Rdereference2");
+ dset2 = H5Ropen_object((const H5R_ref_t *)&rbuf[0], H5P_DEFAULT, dapl_id);
+ CHECK(dset2, H5I_INVALID_HID, "H5Ropen_object");
/* Check information in referenced dataset */
sid1 = H5Dget_space(dset2);
- CHECK(sid1, FAIL, "H5Dget_space");
+ CHECK(sid1, H5I_INVALID_HID, "H5Dget_space");
ret = (int)H5Sget_simple_extent_npoints(sid1);
- VERIFY(ret, 4, "H5Sget_simple_extent_npoints");
+ VERIFY(ret, SPACE1_DIM1, "H5Sget_simple_extent_npoints");
/* Read from disk */
ret = H5Dread(dset2, H5T_NATIVE_UINT, H5S_ALL, H5S_ALL, H5P_DEFAULT, tbuf);
@@ -425,24 +481,16 @@ test_reference_obj(void)
CHECK(ret, FAIL, "H5Dclose");
/* Open group object. GAPL isn't supported yet. But it's harmless to pass in */
- group = H5Rdereference2(dataset, H5P_DEFAULT, H5R_OBJECT, &rbuf[2]);
- CHECK(group, FAIL, "H5Rdereference2");
-
- /* Get group's comment */
- size = H5Oget_comment(group, read_comment, (size_t)10);
- CHECK(size, FAIL, "H5Oget_comment");
-
- /* Check for correct comment value */
- if(HDstrcmp(write_comment, read_comment) != 0)
- TestErrPrintf("Error! Incorrect group comment, wanted: %s, got: %s\n",write_comment,read_comment);
+ group = H5Ropen_object((const H5R_ref_t *)&rbuf[2], H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(group, H5I_INVALID_HID, "H5Ropen_object");
/* Close group */
ret = H5Gclose(group);
CHECK(ret, FAIL, "H5Gclose");
/* Open datatype object. TAPL isn't supported yet. But it's harmless to pass in */
- tid1 = H5Rdereference2(dataset, H5P_DEFAULT, H5R_OBJECT, &rbuf[3]);
- CHECK(tid1, FAIL, "H5Rdereference2");
+ tid1 = H5Ropen_object((const H5R_ref_t *)&rbuf[3], H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(tid1, H5I_INVALID_HID, "H5Ropen_object");
/* Verify correct datatype */
{
@@ -455,14 +503,6 @@ test_reference_obj(void)
VERIFY(ret, 3, "H5Tget_nmembers");
}
- /* Attempting to retrieve type of object using non-valid refs */
- for(j = 0; j < 3; j++) {
- H5E_BEGIN_TRY {
- ret = H5Rget_obj_type2(dataset, H5R_OBJECT, &nvrbuf[j], &obj_type);
- } H5E_END_TRY;
- VERIFY(ret, FAIL, "H5Rget_obj_type2");
- } /* end for */
-
/* Close datatype */
ret = H5Tclose(tid1);
CHECK(ret, FAIL, "H5Tclose");
@@ -479,6 +519,14 @@ test_reference_obj(void)
ret = H5Fclose(fid1);
CHECK(ret, FAIL, "H5Fclose");
+ /* Destroy references */
+ for(j = 0; j < SPACE1_DIM1; j++) {
+ ret = H5Rdestroy(&wbuf[j]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ ret = H5Rdestroy(&rbuf[j]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ }
+
/* Free memory buffers */
HDfree(wbuf);
HDfree(rbuf);
@@ -498,13 +546,13 @@ test_reference_obj(void)
static void
test_reference_region(H5F_libver_t libver_low, H5F_libver_t libver_high)
{
- hid_t fid1; /* HDF5 File IDs */
- hid_t fapl = -1; /* File access property list */
- hid_t dset1, /* Dataset ID */
- dset2; /* Dereferenced dataset ID */
- hid_t sid1, /* Dataspace ID #1 */
- sid2; /* Dataspace ID #2 */
- hid_t dapl_id; /* Dataset access property list */
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t fapl; /* File access property list */
+ hid_t dset1, /* Dataset ID */
+ dset2; /* Dereferenced dataset ID */
+ hid_t sid1, /* Dataspace ID #1 */
+ sid2; /* Dataspace ID #2 */
+ hid_t dapl_id; /* Dataset access property list */
hsize_t dims1[] = {SPACE1_DIM1},
dims2[] = {SPACE2_DIM1, SPACE2_DIM2};
hsize_t start[SPACE2_RANK]; /* Starting location of hyperslab */
@@ -512,62 +560,60 @@ test_reference_region(H5F_libver_t libver_low, H5F_libver_t libver_high)
hsize_t count[SPACE2_RANK]; /* Element count of hyperslab */
hsize_t block[SPACE2_RANK]; /* Block size of hyperslab */
hsize_t coord1[POINT1_NPOINTS][SPACE2_RANK]; /* Coordinates for point selection */
- hsize_t *coords; /* Coordinate buffer */
- hsize_t low[SPACE2_RANK]; /* Selection bounds */
- hsize_t high[SPACE2_RANK]; /* Selection bounds */
- hdset_reg_ref_t *wbuf, /* buffer to write to disk */
- *rbuf; /* buffer read from disk */
- hdset_reg_ref_t nvrbuf[3]={{0},{101},{255}}; /* buffer with non-valid refs */
- uint8_t *dwbuf, /* Buffer for writing numeric data to disk */
- *drbuf; /* Buffer for reading numeric data from disk */
- uint8_t *tu8; /* Temporary pointer to uint8 data */
- H5O_type_t obj_type; /* Type of object */
- int i, j; /* counting variables */
- hssize_t hssize_ret; /* hssize_t return value */
- htri_t tri_ret; /* htri_t return value */
- herr_t ret; /* Generic return value */
- hdset_reg_ref_t undef_reg[1]; /* test for undefined reference */
- hid_t dset_NA; /* Dataset id for undefined reference */
- hid_t space_NA; /* Dataspace id for undefined reference */
- hsize_t dims_NA[1] = {1}; /* Dims array for undefined reference */
- hdset_reg_ref_t wdata_NA[1], /* Write buffer */
- rdata_NA[1]; /* Read buffer */
+ hsize_t *coords; /* Coordinate buffer */
+ hsize_t low[SPACE2_RANK]; /* Selection bounds */
+ hsize_t high[SPACE2_RANK]; /* Selection bounds */
+ H5R_ref_t *wbuf, /* buffer to write to disk */
+ *rbuf; /* buffer read from disk */
+ H5R_ref_t nvrbuf[3]={{0},{101},{255}}; /* buffer with non-valid refs */
+ uint8_t *dwbuf, /* Buffer for writing numeric data to disk */
+ *drbuf; /* Buffer for reading numeric data from disk */
+ uint8_t *tu8; /* Temporary pointer to uint8 data */
+ H5O_type_t obj_type; /* Type of object */
+ int i, j; /* Counters */
+ hssize_t hssize_ret; /* hssize_t return value */
+ htri_t tri_ret; /* htri_t return value */
+ herr_t ret; /* Generic return value */
+ hid_t dset_NA; /* Dataset id for undefined reference */
+ hid_t space_NA; /* Dataspace id for undefined reference */
+ hsize_t dims_NA[1] = {1}; /* Dims array for undefined reference */
+ H5R_ref_t rdata_NA[1]; /* Read buffer */
/* Output message about test being performed */
MESSAGE(5, ("Testing Dataset Region Reference Functions\n"));
/* Allocate write & read buffers */
- wbuf = (hdset_reg_ref_t *)HDcalloc(sizeof(hdset_reg_ref_t), (size_t)SPACE1_DIM1);
- rbuf = (hdset_reg_ref_t *)HDmalloc(sizeof(hdset_reg_ref_t) * SPACE1_DIM1);
- dwbuf = (uint8_t *)HDmalloc(sizeof(uint8_t) * SPACE2_DIM1 * SPACE2_DIM2);
+ wbuf = (H5R_ref_t *)HDcalloc(sizeof(H5R_ref_t), SPACE1_DIM1);
+ rbuf = (H5R_ref_t *)HDcalloc(sizeof(H5R_ref_t), SPACE1_DIM1);
+ dwbuf = (uint8_t *)HDcalloc(sizeof(uint8_t), (size_t)(SPACE2_DIM1 * SPACE2_DIM2));
drbuf = (uint8_t *)HDcalloc(sizeof(uint8_t), (size_t)(SPACE2_DIM1 * SPACE2_DIM2));
+ for(tu8 = dwbuf, i = 0; i < (SPACE2_DIM1 * SPACE2_DIM2); i++)
+ *tu8++ = (uint8_t)(i * 3);
+
/* Create file access property list */
fapl = H5Pcreate(H5P_FILE_ACCESS);
- CHECK(fapl, FAIL, "H5Pcreate");
+ CHECK(fapl, H5I_INVALID_HID, "H5Pcreate");
/* Set the low/high version bounds in fapl */
ret = H5Pset_libver_bounds(fapl, libver_low, libver_high);
CHECK(ret, FAIL, "H5Pset_libver_bounds");
/* Create file with the fapl */
- fid1 = H5Fcreate(FILE2, H5F_ACC_TRUNC, H5P_DEFAULT, fapl);
- CHECK(fid1, FAIL, "H5Fcreate");
+ fid1 = H5Fcreate(FILE_REF_REG, H5F_ACC_TRUNC, H5P_DEFAULT, fapl);
+ CHECK(fid1, H5I_INVALID_HID, "H5Fcreate");
/* Create dataspace for datasets */
sid2 = H5Screate_simple(SPACE2_RANK, dims2, NULL);
- CHECK(sid2, FAIL, "H5Screate_simple");
+ CHECK(sid2, H5I_INVALID_HID, "H5Screate_simple");
/* Create dataset access property list */
dapl_id = H5Pcreate(H5P_DATASET_ACCESS);
- CHECK(dapl_id, FAIL, "H5Pcreate");
+ CHECK(dapl_id, H5I_INVALID_HID, "H5Pcreate");
/* Create a dataset */
dset2 = H5Dcreate2(fid1, "Dataset2", H5T_STD_U8LE, sid2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(dset2, FAIL, "H5Dcreate2");
-
- for(tu8 = dwbuf, i = 0; i < (SPACE2_DIM1 * SPACE2_DIM2); i++)
- *tu8++ = (uint8_t)(i * 3);
+ CHECK(dset2, H5I_INVALID_HID, "H5Dcreate2");
/* Write selection to disk */
ret = H5Dwrite(dset2, H5T_STD_U8LE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dwbuf);
@@ -579,11 +625,11 @@ test_reference_region(H5F_libver_t libver_low, H5F_libver_t libver_high)
/* Create dataspace for the reference dataset */
sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL);
- CHECK(sid1, FAIL, "H5Screate_simple");
+ CHECK(sid1, H5I_INVALID_HID, "H5Screate_simple");
/* Create a dataset */
- dset1 = H5Dcreate2(fid1, "Dataset1", H5T_STD_REF_DSETREG, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(ret, FAIL, "H5Dcreate2");
+ dset1 = H5Dcreate2(fid1, "Dataset1", H5T_STD_REF, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dset1, H5I_INVALID_HID, "H5Dcreate2");
/* Create references */
@@ -599,11 +645,11 @@ test_reference_region(H5F_libver_t libver_low, H5F_libver_t libver_high)
VERIFY(ret, 36, "H5Sget_select_npoints");
/* Store first dataset region */
- ret = H5Rcreate(&wbuf[0], fid1, "/Dataset2", H5R_DATASET_REGION, sid2);
- CHECK(ret, FAIL, "H5Rcreate");
- ret = H5Rget_obj_type2(dset1, H5R_DATASET_REGION, &wbuf[0], &obj_type);
- CHECK(ret, FAIL, "H5Rget_obj_type2");
- VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type2");
+ ret = H5Rcreate_region(fid1, "/Dataset2", sid2, &wbuf[0]);
+ CHECK(ret, FAIL, "H5Rcreate_region");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&wbuf[0], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
/* Select sequence of ten points for second reference */
coord1[0][0] = 6; coord1[0][1] = 9;
@@ -620,17 +666,21 @@ test_reference_region(H5F_libver_t libver_low, H5F_libver_t libver_high)
CHECK(ret, FAIL, "H5Sselect_elements");
ret = (int)H5Sget_select_npoints(sid2);
- VERIFY(ret, 10, "H5Sget_select_npoints");
+ VERIFY(ret, SPACE2_DIM2, "H5Sget_select_npoints");
/* Store second dataset region */
- ret = H5Rcreate(&wbuf[1], fid1, "/Dataset2", H5R_DATASET_REGION, sid2);
- CHECK(ret, FAIL, "H5Rcreate");
+ ret = H5Rcreate_region(fid1, "/Dataset2", sid2, &wbuf[1]);
+ CHECK(ret, FAIL, "H5Rcreate_region");
/* Select unlimited hyperslab for third reference */
- start[0] = 1; start[1] = 8;
- stride[0] = 4; stride[1] = 1;
- count[0] = H5S_UNLIMITED; count[1] = 1;
- block[0] = 2; block[1] = 2;
+ start[0] = 1;
+ start[1] = 8;
+ stride[0] = 4;
+ stride[1] = 1;
+ count[0] = H5S_UNLIMITED;
+ count[1] = 1;
+ block[0] = 2;
+ block[1] = 2;
ret = H5Sselect_hyperslab(sid2, H5S_SELECT_SET, start, stride, count, block);
CHECK(ret, FAIL, "H5Sselect_hyperslab");
@@ -638,41 +688,39 @@ test_reference_region(H5F_libver_t libver_low, H5F_libver_t libver_high)
VERIFY(hssize_ret, (hssize_t)H5S_UNLIMITED, "H5Sget_select_npoints");
/* Store third dataset region */
+ ret = H5Rcreate_region(fid1, "/Dataset2", sid2, &wbuf[2]);
+ CHECK(ret, FAIL, "H5Rcreate_region");
+
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&wbuf[2], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
+
+ /* Store fourth dataset region */
+ ret = H5Rcreate_region(fid1, "/Dataset2", sid2, &wbuf[3]);
+ CHECK(ret, FAIL, "H5Rcreate_region");
+
+ /* Write selection to disk */
H5E_BEGIN_TRY {
- ret = H5Rcreate(&wbuf[2], fid1, "/Dataset2", H5R_DATASET_REGION, sid2);
+ ret = H5Dwrite(dset1, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf);
} H5E_END_TRY;
if(libver_high < H5F_LIBVER_V110)
- VERIFY(ret, FAIL, "H5Rcreate");
+ VERIFY(ret, FAIL, "H5Dwrite");
else
- CHECK(ret, FAIL, "H5Rcreate");
-
- ret = H5Rget_obj_type2(dset1, H5R_DATASET_REGION, &wbuf[0], &obj_type);
- CHECK(ret, FAIL, "H5Rget_obj_type2");
- VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type2");
-
- /* Write selection to disk */
- ret = H5Dwrite(dset1, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf);
- CHECK(ret, FAIL, "H5Dwrite");
+ CHECK(ret, FAIL, "H5Dwrite");
/*
* Store a dataset region reference which will not get written to disk
*/
- /* Create reference to an element in dset1 */
- ret = H5Sselect_elements(sid2, H5S_SELECT_SET, (size_t)1, (const hsize_t *)coord1);
- CHECK(ret, FAIL, "H5Sselect_elements");
- ret = H5Rcreate(&wdata_NA[0], fid1, "/Dataset1", H5R_DATASET_REGION, sid2);
- CHECK(ret, FAIL, "H5Rcreate");
-
/* Create the dataspace of the region references */
space_NA = H5Screate_simple(1, dims_NA, NULL);
- CHECK(space_NA, FAIL, "H5Screate_simple");
+ CHECK(space_NA, H5I_INVALID_HID, "H5Screate_simple");
/* Create the dataset and write the region references to it */
- dset_NA = H5Dcreate2(fid1, "DS_NA", H5T_STD_REF_DSETREG, space_NA, H5P_DEFAULT,
+ dset_NA = H5Dcreate2(fid1, "DS_NA", H5T_STD_REF, space_NA, H5P_DEFAULT,
H5P_DEFAULT, H5P_DEFAULT);
- CHECK(dset_NA, FAIL, "H5Dcreate");
+ CHECK(dset_NA, H5I_INVALID_HID, "H5Dcreate");
/* Close and release resources for undefined region reference tests */
ret = H5Dclose(dset_NA);
@@ -697,8 +745,8 @@ test_reference_region(H5F_libver_t libver_low, H5F_libver_t libver_high)
CHECK(ret, FAIL, "H5Fclose");
/* Re-open the file */
- fid1 = H5Fopen(FILE2, H5F_ACC_RDWR, fapl);
- CHECK(fid1, FAIL, "H5Fopen");
+ fid1 = H5Fopen(FILE_REF_REG, H5F_ACC_RDWR, fapl);
+ CHECK(fid1, H5I_INVALID_HID, "H5Fopen");
/*
* Start the test of an undefined reference
@@ -706,25 +754,25 @@ test_reference_region(H5F_libver_t libver_low, H5F_libver_t libver_high)
/* Open the dataset of the undefined references */
dset_NA = H5Dopen2(fid1, "DS_NA", H5P_DEFAULT);
- CHECK(dset_NA, FAIL, "H5Dopen2");
+ CHECK(dset_NA, H5I_INVALID_HID, "H5Dopen2");
/* Read the data */
- ret = H5Dread(dset_NA, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, rdata_NA);
+ ret = H5Dread(dset_NA, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, rdata_NA);
CHECK(ret, FAIL, "H5Dread");
/*
* Dereference an undefined reference (should fail)
*/
H5E_BEGIN_TRY {
- dset2 = H5Rdereference2(dset_NA, H5P_DEFAULT, H5R_DATASET_REGION, &rdata_NA[0]);
+ dset2 = H5Ropen_object((const H5R_ref_t *)&rdata_NA[0], H5P_DEFAULT, H5P_DEFAULT);
} H5E_END_TRY;
- VERIFY(dset2, FAIL, "H5Rdereference2");
+ VERIFY(dset2, H5I_INVALID_HID, "H5Ropen_object");
/* Close and release resources. */
ret = H5Dclose(dset_NA);
CHECK(ret, FAIL, "H5Dclose");
- /* This close should fail since H5Rdereference2 never created
+ /* This close should fail since H5Ropen_object never created
* the id of the referenced object. */
H5E_BEGIN_TRY {
ret = H5Dclose(dset2);
@@ -737,115 +785,116 @@ test_reference_region(H5F_libver_t libver_low, H5F_libver_t libver_high)
/* Open the dataset */
dset1 = H5Dopen2(fid1, "/Dataset1", H5P_DEFAULT);
- CHECK(dset1, FAIL, "H5Dopen2");
+ CHECK(dset1, H5I_INVALID_HID, "H5Dopen2");
/* Read selection from disk */
- ret = H5Dread(dset1, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf);
- CHECK(ret, FAIL, "H5Dread");
-
- /* Try to read an unaddressed dataset */
- dset2 = H5Rdereference2(dset1, dapl_id, H5R_DATASET_REGION, undef_reg);
- VERIFY(dset2, FAIL, "H5Rdereference2 haddr_undef");
+ H5E_BEGIN_TRY {
+ ret = H5Dread(dset1, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf);
+ } H5E_END_TRY;
- /* Try to open objects */
- dset2 = H5Rdereference2(dset1, dapl_id, H5R_DATASET_REGION, &rbuf[0]);
- CHECK(dset2, FAIL, "H5Rdereference2");
+ if(libver_high < H5F_LIBVER_V110)
+ VERIFY(ret, FAIL, "H5Dread");
+ else {
+ CHECK(ret, FAIL, "H5Dread");
- /* Check what H5Rget_obj_type2 function returns */
- ret = H5Rget_obj_type2(dset1, H5R_DATASET_REGION, &rbuf[0], &obj_type);
- CHECK(ret, FAIL, "H5Rget_obj_type2");
- VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type2");
+ /* Try to open objects */
+ dset2 = H5Ropen_object((const H5R_ref_t *)&rbuf[0], H5P_DEFAULT, dapl_id);
+ CHECK(dset2, H5I_INVALID_HID, "H5Ropen_object");
- /* Check information in referenced dataset */
- sid1 = H5Dget_space(dset2);
- CHECK(sid1, FAIL, "H5Dget_space");
+ /* Check what H5Rget_obj_type3 function returns */
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&rbuf[0], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
- ret = (int)H5Sget_simple_extent_npoints(sid1);
- VERIFY(ret, 100, "H5Sget_simple_extent_npoints");
+ /* Check information in referenced dataset */
+ sid1 = H5Dget_space(dset2);
+ CHECK(sid1, H5I_INVALID_HID, "H5Dget_space");
- /* Read from disk */
- ret = H5Dread(dset2, H5T_STD_U8LE, H5S_ALL, H5S_ALL, H5P_DEFAULT, drbuf);
- CHECK(ret, FAIL, "H5Dread");
+ ret = (int)H5Sget_simple_extent_npoints(sid1);
+ VERIFY(ret, (SPACE2_DIM1 * SPACE2_DIM2), "H5Sget_simple_extent_npoints");
- for(tu8 = (uint8_t *)drbuf, i = 0; i < (SPACE2_DIM1 * SPACE2_DIM2); i++, tu8++)
- VERIFY(*tu8, (uint8_t)(i * 3), "Data");
+ /* Read from disk */
+ ret = H5Dread(dset2, H5T_STD_U8LE, H5S_ALL, H5S_ALL, H5P_DEFAULT, drbuf);
+ CHECK(ret, FAIL, "H5Dread");
- /* Get the hyperslab selection */
- sid2 = H5Rget_region(dset1, H5R_DATASET_REGION, &rbuf[0]);
- CHECK(sid2, FAIL, "H5Rget_region");
+ for(tu8 = (uint8_t *)drbuf, i = 0; i < (SPACE2_DIM1 * SPACE2_DIM2); i++, tu8++)
+ VERIFY(*tu8, (uint8_t)(i * 3), "Data");
- /* Verify correct hyperslab selected */
- ret = (int)H5Sget_select_npoints(sid2);
- VERIFY(ret, 36, "H5Sget_select_npoints");
- ret = (int)H5Sget_select_hyper_nblocks(sid2);
- VERIFY(ret, 1, "H5Sget_select_hyper_nblocks");
- coords = (hsize_t *)HDmalloc((size_t)ret * SPACE2_RANK * sizeof(hsize_t) * 2); /* allocate space for the hyperslab blocks */
- ret = H5Sget_select_hyper_blocklist(sid2, (hsize_t)0, (hsize_t)ret, coords);
- CHECK(ret, FAIL, "H5Sget_select_hyper_blocklist");
- VERIFY(coords[0], 2, "Hyperslab Coordinates");
- VERIFY(coords[1], 2, "Hyperslab Coordinates");
- VERIFY(coords[2], 7, "Hyperslab Coordinates");
- VERIFY(coords[3], 7, "Hyperslab Coordinates");
- HDfree(coords);
- ret = H5Sget_select_bounds(sid2, low, high);
- CHECK(ret, FAIL, "H5Sget_select_bounds");
- VERIFY(low[0], 2, "Selection Bounds");
- VERIFY(low[1], 2, "Selection Bounds");
- VERIFY(high[0], 7, "Selection Bounds");
- VERIFY(high[1], 7, "Selection Bounds");
+ /* Get the hyperslab selection */
+ sid2 = H5Ropen_region((const H5R_ref_t *)&rbuf[0], H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(sid2, H5I_INVALID_HID, "H5Ropen_region");
- /* Close region space */
- ret = H5Sclose(sid2);
- CHECK(ret, FAIL, "H5Sclose");
+ /* Verify correct hyperslab selected */
+ ret = (int)H5Sget_select_npoints(sid2);
+ VERIFY(ret, 36, "H5Sget_select_npoints");
+ ret = (int)H5Sget_select_hyper_nblocks(sid2);
+ VERIFY(ret, 1, "H5Sget_select_hyper_nblocks");
+ coords = (hsize_t *)HDmalloc((size_t)ret * SPACE2_RANK * sizeof(hsize_t) * 2); /* allocate space for the hyperslab blocks */
+ ret = H5Sget_select_hyper_blocklist(sid2, (hsize_t)0, (hsize_t)ret, coords);
+ CHECK(ret, FAIL, "H5Sget_select_hyper_blocklist");
+ VERIFY(coords[0], 2, "Hyperslab Coordinates");
+ VERIFY(coords[1], 2, "Hyperslab Coordinates");
+ VERIFY(coords[2], 7, "Hyperslab Coordinates");
+ VERIFY(coords[3], 7, "Hyperslab Coordinates");
+ HDfree(coords);
+ ret = H5Sget_select_bounds(sid2, low, high);
+ CHECK(ret, FAIL, "H5Sget_select_bounds");
+ VERIFY(low[0], 2, "Selection Bounds");
+ VERIFY(low[1], 2, "Selection Bounds");
+ VERIFY(high[0], 7, "Selection Bounds");
+ VERIFY(high[1], 7, "Selection Bounds");
- /* Get the element selection */
- sid2 = H5Rget_region(dset1, H5R_DATASET_REGION, &rbuf[1]);
- CHECK(sid2, FAIL, "H5Rget_region");
+ /* Close region space */
+ ret = H5Sclose(sid2);
+ CHECK(ret, FAIL, "H5Sclose");
- /* Verify correct elements selected */
- ret = (int)H5Sget_select_npoints(sid2);
- VERIFY(ret, 10, "H5Sget_select_npoints");
- ret = (int)H5Sget_select_elem_npoints(sid2);
- VERIFY(ret, 10, "H5Sget_select_elem_npoints");
- coords = (hsize_t *)HDmalloc((size_t)ret * SPACE2_RANK * sizeof(hsize_t)); /* allocate space for the element points */
- ret = H5Sget_select_elem_pointlist(sid2, (hsize_t)0, (hsize_t)ret, coords);
- CHECK(ret, FAIL, "H5Sget_select_elem_pointlist");
- VERIFY(coords[0], coord1[0][0], "Element Coordinates");
- VERIFY(coords[1], coord1[0][1], "Element Coordinates");
- VERIFY(coords[2], coord1[1][0], "Element Coordinates");
- VERIFY(coords[3], coord1[1][1], "Element Coordinates");
- VERIFY(coords[4], coord1[2][0], "Element Coordinates");
- VERIFY(coords[5], coord1[2][1], "Element Coordinates");
- VERIFY(coords[6], coord1[3][0], "Element Coordinates");
- VERIFY(coords[7], coord1[3][1], "Element Coordinates");
- VERIFY(coords[8], coord1[4][0], "Element Coordinates");
- VERIFY(coords[9], coord1[4][1], "Element Coordinates");
- VERIFY(coords[10], coord1[5][0], "Element Coordinates");
- VERIFY(coords[11], coord1[5][1], "Element Coordinates");
- VERIFY(coords[12], coord1[6][0], "Element Coordinates");
- VERIFY(coords[13], coord1[6][1], "Element Coordinates");
- VERIFY(coords[14], coord1[7][0], "Element Coordinates");
- VERIFY(coords[15], coord1[7][1], "Element Coordinates");
- VERIFY(coords[16], coord1[8][0], "Element Coordinates");
- VERIFY(coords[17], coord1[8][1], "Element Coordinates");
- VERIFY(coords[18], coord1[9][0], "Element Coordinates");
- VERIFY(coords[19], coord1[9][1], "Element Coordinates");
- HDfree(coords);
- ret = H5Sget_select_bounds(sid2, low, high);
- CHECK(ret, FAIL, "H5Sget_select_bounds");
- VERIFY(low[0], 0, "Selection Bounds");
- VERIFY(low[1], 0, "Selection Bounds");
- VERIFY(high[0], 9, "Selection Bounds");
- VERIFY(high[1], 9, "Selection Bounds");
+ /* Get the element selection */
+ sid2 = H5Ropen_region((const H5R_ref_t *)&rbuf[1], H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(sid2, H5I_INVALID_HID, "H5Ropen_region");
+
+ /* Verify correct elements selected */
+ ret = (int)H5Sget_select_npoints(sid2);
+ VERIFY(ret, SPACE2_DIM2, "H5Sget_select_npoints");
+ ret = (int)H5Sget_select_elem_npoints(sid2);
+ VERIFY(ret, SPACE2_DIM2, "H5Sget_select_elem_npoints");
+ coords = (hsize_t *)HDmalloc((size_t)ret * SPACE2_RANK * sizeof(hsize_t)); /* allocate space for the element points */
+ ret = H5Sget_select_elem_pointlist(sid2, (hsize_t)0, (hsize_t)ret, coords);
+ CHECK(ret, FAIL, "H5Sget_select_elem_pointlist");
+ VERIFY(coords[0], coord1[0][0], "Element Coordinates");
+ VERIFY(coords[1], coord1[0][1], "Element Coordinates");
+ VERIFY(coords[2], coord1[1][0], "Element Coordinates");
+ VERIFY(coords[3], coord1[1][1], "Element Coordinates");
+ VERIFY(coords[4], coord1[2][0], "Element Coordinates");
+ VERIFY(coords[5], coord1[2][1], "Element Coordinates");
+ VERIFY(coords[6], coord1[3][0], "Element Coordinates");
+ VERIFY(coords[7], coord1[3][1], "Element Coordinates");
+ VERIFY(coords[8], coord1[4][0], "Element Coordinates");
+ VERIFY(coords[9], coord1[4][1], "Element Coordinates");
+ VERIFY(coords[10], coord1[5][0], "Element Coordinates");
+ VERIFY(coords[11], coord1[5][1], "Element Coordinates");
+ VERIFY(coords[12], coord1[6][0], "Element Coordinates");
+ VERIFY(coords[13], coord1[6][1], "Element Coordinates");
+ VERIFY(coords[14], coord1[7][0], "Element Coordinates");
+ VERIFY(coords[15], coord1[7][1], "Element Coordinates");
+ VERIFY(coords[16], coord1[8][0], "Element Coordinates");
+ VERIFY(coords[17], coord1[8][1], "Element Coordinates");
+ VERIFY(coords[18], coord1[9][0], "Element Coordinates");
+ VERIFY(coords[19], coord1[9][1], "Element Coordinates");
+ HDfree(coords);
+ ret = H5Sget_select_bounds(sid2, low, high);
+ CHECK(ret, FAIL, "H5Sget_select_bounds");
+ VERIFY(low[0], 0, "Selection Bounds");
+ VERIFY(low[1], 0, "Selection Bounds");
+ VERIFY(high[0], 9, "Selection Bounds");
+ VERIFY(high[1], 9, "Selection Bounds");
- /* Close region space */
- ret = H5Sclose(sid2);
- CHECK(ret, FAIL, "H5Sclose");
+ /* Close region space */
+ ret = H5Sclose(sid2);
+ CHECK(ret, FAIL, "H5Sclose");
- if(libver_high >= H5F_LIBVER_V110) {
/* Get the unlimited selection */
- sid2 = H5Rget_region(dset1, H5R_DATASET_REGION, &rbuf[2]);
- CHECK(sid2, FAIL, "H5Rget_region");
+ sid2 = H5Ropen_region((const H5R_ref_t *)&rbuf[2], H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(sid2, H5I_INVALID_HID, "H5Ropen_region");
/* Verify correct hyperslab selected */
hssize_ret = H5Sget_select_npoints(sid2);
@@ -867,23 +916,23 @@ test_reference_region(H5F_libver_t libver_low, H5F_libver_t libver_high)
/* Close region space */
ret = H5Sclose(sid2);
CHECK(ret, FAIL, "H5Sclose");
- }
- /* Close first space */
- ret = H5Sclose(sid1);
- CHECK(ret, FAIL, "H5Sclose");
-
- /* Close dereferenced Dataset */
- ret = H5Dclose(dset2);
- CHECK(ret, FAIL, "H5Dclose");
+ /* Close first space */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
- /* Attempting to retrieve type of object using non-valid refs */
- for(j = 0; j < 3; j++) {
- H5E_BEGIN_TRY {
- ret = H5Rget_obj_type2(dset1, H5R_DATASET_REGION, &nvrbuf[j], &obj_type);
- } H5E_END_TRY;
- VERIFY(ret, FAIL, "H5Rget_obj_type2");
- } /* end for */
+ /* Close dereferenced Dataset */
+ ret = H5Dclose(dset2);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Attempting to retrieve type of object using non-valid refs */
+ for(j = 0; j < 3; j++) {
+ H5E_BEGIN_TRY {
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&nvrbuf[j], H5P_DEFAULT, &obj_type);
+ } H5E_END_TRY;
+ VERIFY(ret, FAIL, "H5Rget_obj_type3");
+ } /* end for */
+ }
/* Close Dataset */
ret = H5Dclose(dset1);
@@ -897,6 +946,16 @@ test_reference_region(H5F_libver_t libver_low, H5F_libver_t libver_high)
ret = H5Fclose(fid1);
CHECK(ret, FAIL, "H5Fclose");
+ /* Destroy references */
+ for(j = 0; j < SPACE1_DIM1; j++) {
+ ret = H5Rdestroy(&wbuf[j]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ if(libver_high >= H5F_LIBVER_V110) {
+ ret = H5Rdestroy(&rbuf[j]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ }
+ }
+
/* Free memory buffers */
HDfree(wbuf);
HDfree(rbuf);
@@ -917,14 +976,14 @@ test_reference_region(H5F_libver_t libver_low, H5F_libver_t libver_high)
static void
test_reference_region_1D(H5F_libver_t libver_low, H5F_libver_t libver_high)
{
- hid_t fid1; /* HDF5 File IDs */
- hid_t fapl = -1; /* File access property list */
- hid_t dset1, /* Dataset ID */
- dset3; /* Dereferenced dataset ID */
- hid_t sid1, /* Dataspace ID #1 */
- sid3; /* Dataspace ID #3 */
- hid_t dapl_id; /* Dataset access property list */
- hsize_t dims1[] = {SPACE1_DIM1},
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t fapl; /* File access property list */
+ hid_t dset1, /* Dataset ID */
+ dset3; /* Dereferenced dataset ID */
+ hid_t sid1, /* Dataspace ID #1 */
+ sid3; /* Dataspace ID #3 */
+ hid_t dapl_id; /* Dataset access property list */
+ hsize_t dims1[] = {2}, /* Must be 2 */
dims3[] = {SPACE3_DIM1};
hsize_t start[SPACE3_RANK]; /* Starting location of hyperslab */
hsize_t stride[SPACE3_RANK]; /* Stride of hyperslab */
@@ -934,50 +993,50 @@ test_reference_region_1D(H5F_libver_t libver_low, H5F_libver_t libver_high)
hsize_t *coords; /* Coordinate buffer */
hsize_t low[SPACE3_RANK]; /* Selection bounds */
hsize_t high[SPACE3_RANK]; /* Selection bounds */
- hdset_reg_ref_t *wbuf, /* buffer to write to disk */
- *rbuf; /* buffer read from disk */
- uint8_t *dwbuf, /* Buffer for writing numeric data to disk */
- *drbuf; /* Buffer for reading numeric data from disk */
- uint8_t *tu8; /* Temporary pointer to uint8 data */
+ H5R_ref_t *wbuf, /* buffer to write to disk */
+ *rbuf; /* buffer read from disk */
+ uint8_t *dwbuf, /* Buffer for writing numeric data to disk */
+ *drbuf; /* Buffer for reading numeric data from disk */
+ uint8_t *tu8; /* Temporary pointer to uint8 data */
H5O_type_t obj_type; /* Object type */
- int i; /* counting variables */
- herr_t ret; /* Generic return value */
+ int i; /* Counter */
+ herr_t ret; /* Generic return value */
/* Output message about test being performed */
MESSAGE(5, ("Testing 1-D Dataset Region Reference Functions\n"));
/* Allocate write & read buffers */
- wbuf = (hdset_reg_ref_t *)HDcalloc(sizeof(hdset_reg_ref_t), (size_t)SPACE1_DIM1);
- rbuf = (hdset_reg_ref_t *)HDmalloc(sizeof(hdset_reg_ref_t) * SPACE1_DIM1);
- dwbuf = (uint8_t *)HDmalloc(sizeof(uint8_t) * SPACE3_DIM1);
+ wbuf = (H5R_ref_t *)HDcalloc(sizeof(H5R_ref_t), (size_t)SPACE1_DIM1);
+ rbuf = (H5R_ref_t *)HDcalloc(sizeof(H5R_ref_t), (size_t)SPACE1_DIM1);
+ dwbuf = (uint8_t *)HDcalloc(sizeof(uint8_t), (size_t)SPACE3_DIM1);
drbuf = (uint8_t *)HDcalloc(sizeof(uint8_t), (size_t)SPACE3_DIM1);
+ for(tu8 = dwbuf, i = 0; i < SPACE3_DIM1; i++)
+ *tu8++ = (uint8_t)(i * 3);
+
/* Create the file access property list */
fapl = H5Pcreate(H5P_FILE_ACCESS);
- CHECK(fapl, FAIL, "H5Pcreate");
+ CHECK(fapl, H5I_INVALID_HID, "H5Pcreate");
/* Set the low/high version bounds in fapl */
ret = H5Pset_libver_bounds(fapl, libver_low, libver_high);
CHECK(ret, FAIL, "H5Pset_libver_bounds");
/* Create file with the fapl */
- fid1 = H5Fcreate(FILE2, H5F_ACC_TRUNC, H5P_DEFAULT, fapl);
- CHECK(fid1, FAIL, "H5Fcreate");
+ fid1 = H5Fcreate(FILE_REF_REG_1D, H5F_ACC_TRUNC, H5P_DEFAULT, fapl);
+ CHECK(fid1, H5I_INVALID_HID, "H5Fcreate");
/* Create dataspace for datasets */
sid3 = H5Screate_simple(SPACE3_RANK, dims3, NULL);
- CHECK(sid3, FAIL, "H5Screate_simple");
+ CHECK(sid3, H5I_INVALID_HID, "H5Screate_simple");
/* Create dataset access property list */
dapl_id = H5Pcreate(H5P_DATASET_ACCESS);
- CHECK(dapl_id, FAIL, "H5Pcreate");
+ CHECK(dapl_id, H5I_INVALID_HID, "H5Pcreate");
/* Create a dataset */
dset3 = H5Dcreate2(fid1, "Dataset2", H5T_STD_U8LE, sid3, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(dset3, FAIL, "H5Dcreate2");
-
- for(tu8 = dwbuf, i = 0; i < SPACE3_DIM1; i++)
- *tu8++ = (uint8_t)(i * 3);
+ CHECK(dset3, H5I_INVALID_HID, "H5Dcreate2");
/* Write selection to disk */
ret = H5Dwrite(dset3, H5T_STD_U8LE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dwbuf);
@@ -989,31 +1048,31 @@ test_reference_region_1D(H5F_libver_t libver_low, H5F_libver_t libver_high)
/* Create dataspace for the reference dataset */
sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL);
- CHECK(sid1, FAIL, "H5Screate_simple");
+ CHECK(sid1, H5I_INVALID_HID, "H5Screate_simple");
/* Create a dataset */
- dset1 = H5Dcreate2(fid1, "Dataset1", H5T_STD_REF_DSETREG, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ dset1 = H5Dcreate2(fid1, "Dataset1", H5T_STD_REF, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
CHECK(ret, FAIL, "H5Dcreate2");
/* Create references */
/* Select 15 2x1 hyperslabs for first reference */
- start[0] = 2;
+ start[0] = 2;
stride[0] = 5;
- count[0] = 15;
- block[0] = 2;
+ count[0] = 15;
+ block[0] = 2;
ret = H5Sselect_hyperslab(sid3, H5S_SELECT_SET, start, stride, count, block);
CHECK(ret, FAIL, "H5Sselect_hyperslab");
ret = (int)H5Sget_select_npoints(sid3);
- VERIFY(ret, 30, "H5Sget_select_npoints");
+ VERIFY(ret, (block[0] * count[0]), "H5Sget_select_npoints");
/* Store first dataset region */
- ret = H5Rcreate(&wbuf[0], fid1, "/Dataset2", H5R_DATASET_REGION, sid3);
- CHECK(ret, FAIL, "H5Rcreate");
- ret = H5Rget_obj_type2(dset1, H5R_DATASET_REGION, &wbuf[0], &obj_type);
- CHECK(ret, FAIL, "H5Rget_obj_type2");
- VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type2");
+ ret = H5Rcreate_region(fid1, "/Dataset2", sid3, &wbuf[0]);
+ CHECK(ret, FAIL, "H5Rcreate_region");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&wbuf[0], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
/* Select sequence of ten points for second reference */
coord1[0][0] = 16;
@@ -1030,14 +1089,14 @@ test_reference_region_1D(H5F_libver_t libver_low, H5F_libver_t libver_high)
CHECK(ret, FAIL, "H5Sselect_elements");
ret = (int)H5Sget_select_npoints(sid3);
- VERIFY(ret, 10, "H5Sget_select_npoints");
+ VERIFY(ret, POINT1_NPOINTS, "H5Sget_select_npoints");
/* Store second dataset region */
- ret = H5Rcreate(&wbuf[1], fid1, "/Dataset2", H5R_DATASET_REGION, sid3);
- CHECK(ret, FAIL, "H5Rcreate");
+ ret = H5Rcreate_region(fid1, "/Dataset2", sid3, &wbuf[1]);
+ CHECK(ret, FAIL, "H5Rcreate_region");
/* Write selection to disk */
- ret = H5Dwrite(dset1, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf);
+ ret = H5Dwrite(dset1, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf);
CHECK(ret, FAIL, "H5Dwrite");
/* Close disk dataspace */
@@ -1057,32 +1116,32 @@ test_reference_region_1D(H5F_libver_t libver_low, H5F_libver_t libver_high)
CHECK(ret, FAIL, "H5Fclose");
/* Re-open the file */
- fid1 = H5Fopen(FILE2, H5F_ACC_RDWR, fapl);
- CHECK(fid1, FAIL, "H5Fopen");
+ fid1 = H5Fopen(FILE_REF_REG_1D, H5F_ACC_RDWR, fapl);
+ CHECK(fid1, H5I_INVALID_HID, "H5Fopen");
/* Open the dataset */
dset1 = H5Dopen2(fid1, "/Dataset1", H5P_DEFAULT);
- CHECK(dset1, FAIL, "H5Dopen2");
+ CHECK(dset1, H5I_INVALID_HID, "H5Dopen2");
/* Read selection from disk */
- ret = H5Dread(dset1, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf);
+ ret = H5Dread(dset1, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf);
CHECK(ret, FAIL, "H5Dread");
/* Try to open objects */
- dset3 = H5Rdereference2(dset1, dapl_id, H5R_DATASET_REGION, &rbuf[0]);
- CHECK(dset3, FAIL, "H5Rdereference2");
+ dset3 = H5Ropen_object((const H5R_ref_t *)&rbuf[0], H5P_DEFAULT, dapl_id);
+ CHECK(dset3, H5I_INVALID_HID, "H5Ropen_object");
- /* Check what H5Rget_obj_type2 function returns */
- ret = H5Rget_obj_type2(dset1, H5R_DATASET_REGION, &rbuf[0], &obj_type);
- CHECK(ret, FAIL, "H5Rget_obj_type2");
- VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type2");
+ /* Check what H5Rget_obj_type3 function returns */
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&rbuf[0], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
/* Check information in referenced dataset */
sid1 = H5Dget_space(dset3);
- CHECK(sid1, FAIL, "H5Dget_space");
+ CHECK(sid1, H5I_INVALID_HID, "H5Dget_space");
ret = (int)H5Sget_simple_extent_npoints(sid1);
- VERIFY(ret, 100, "H5Sget_simple_extent_npoints");
+ VERIFY(ret, SPACE3_DIM1, "H5Sget_simple_extent_npoints");
/* Read from disk */
ret = H5Dread(dset3, H5T_STD_U8LE, H5S_ALL, H5S_ALL, H5P_DEFAULT, drbuf);
@@ -1092,8 +1151,8 @@ test_reference_region_1D(H5F_libver_t libver_low, H5F_libver_t libver_high)
VERIFY(*tu8, (uint8_t)(i * 3), "Data");
/* Get the hyperslab selection */
- sid3 = H5Rget_region(dset1, H5R_DATASET_REGION, &rbuf[0]);
- CHECK(sid3, FAIL, "H5Rget_region");
+ sid3 = H5Ropen_region((const H5R_ref_t *)&rbuf[0], H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(sid3, H5I_INVALID_HID, "H5Ropen_region");
/* Verify correct hyperslab selected */
ret = (int)H5Sget_select_npoints(sid3);
@@ -1144,8 +1203,8 @@ test_reference_region_1D(H5F_libver_t libver_low, H5F_libver_t libver_high)
CHECK(ret, FAIL, "H5Sclose");
/* Get the element selection */
- sid3 = H5Rget_region(dset1, H5R_DATASET_REGION, &rbuf[1]);
- CHECK(sid3, FAIL, "H5Rget_region");
+ sid3 = H5Ropen_region((const H5R_ref_t *)&rbuf[1], H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(sid3, H5I_INVALID_HID, "H5Ropen_region");
/* Verify correct elements selected */
ret = (int)H5Sget_select_npoints(sid3);
@@ -1199,6 +1258,14 @@ test_reference_region_1D(H5F_libver_t libver_low, H5F_libver_t libver_high)
ret = H5Fclose(fid1);
CHECK(ret, FAIL, "H5Fclose");
+ /* Destroy references */
+ for(i = 0; i < 2; i++) {
+ ret = H5Rdestroy(&wbuf[i]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ ret = H5Rdestroy(&rbuf[i]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ }
+
/* Free memory buffers */
HDfree(wbuf);
HDfree(rbuf);
@@ -1215,44 +1282,43 @@ test_reference_region_1D(H5F_libver_t libver_low, H5F_libver_t libver_high)
static void
test_reference_obj_deleted(void)
{
- hid_t fid1; /* HDF5 File IDs */
- hid_t dataset, /* Dataset ID */
- dset2; /* Dereferenced dataset ID */
- hid_t sid1; /* Dataspace ID */
- hobj_ref_t oref; /* Object Reference to test */
- H5O_type_t obj_type; /* Object type */
- haddr_t addr = HADDR_UNDEF; /* test for undefined reference */
- herr_t ret; /* Generic return value */
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t dataset, /* Dataset ID */
+ dset2; /* Dereferenced dataset ID */
+ hid_t sid1; /* Dataspace ID */
+ H5R_ref_t oref; /* Object Reference to test */
+ H5O_type_t obj_type; /* Object type */
+ herr_t ret; /* Generic return value */
/* Create file */
- fid1 = H5Fcreate(FILE3, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(fid1, FAIL, "H5Fcreate");
+ fid1 = H5Fcreate(FILE_REF_OBJ_DEL, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(fid1, H5I_INVALID_HID, "H5Fcreate");
/* Create scalar dataspace for datasets */
sid1 = H5Screate_simple(0, NULL, NULL);
- CHECK(sid1, FAIL, "H5Screate_simple");
+ CHECK(sid1, H5I_INVALID_HID, "H5Screate_simple");
/* Create a dataset to reference (deleted later) */
dataset = H5Dcreate2(fid1, "Dataset1", H5T_NATIVE_INT, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(dataset, FAIL, "H5Dcreate2");
+ CHECK(dataset, H5I_INVALID_HID, "H5Dcreate2");
/* Close Dataset */
ret = H5Dclose(dataset);
CHECK(ret, FAIL, "H5Dclose");
/* Create a dataset */
- dataset = H5Dcreate2(fid1, "Dataset2", H5T_STD_REF_OBJ, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(dataset, FAIL, "H5Dcreate2");
+ dataset = H5Dcreate2(fid1, "Dataset2", H5T_STD_REF, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, H5I_INVALID_HID, "H5Dcreate2");
/* Create reference to dataset */
- ret = H5Rcreate(&oref, fid1, "/Dataset1", H5R_OBJECT, (hid_t)-1);
- CHECK(ret, FAIL, "H5Rcreate");
- ret = H5Rget_obj_type2(dataset, H5R_OBJECT, &oref, &obj_type);
- CHECK(ret, FAIL, "H5Rget_obj_type2");
- VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type2");
+ ret = H5Rcreate_object(fid1, "/Dataset1", &oref);
+ CHECK(ret, FAIL, "H5Rcreate_object");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&oref, H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
/* Write selection to disk */
- ret = H5Dwrite(dataset, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, &oref);
+ ret = H5Dwrite(dataset, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, &oref);
CHECK(ret, FAIL, "H5Dwrite");
/* Close Dataset */
@@ -1271,31 +1337,25 @@ test_reference_obj_deleted(void)
ret = H5Fclose(fid1);
CHECK(ret, FAIL, "H5Fclose");
+ /* Destroy reference */
+ ret = H5Rdestroy(&oref);
+ CHECK(ret, FAIL, "H5Rdestroy");
+
/* Re-open the file */
- fid1 = H5Fopen(FILE3, H5F_ACC_RDWR, H5P_DEFAULT);
- CHECK(fid1, FAIL, "H5Fopen");
+ fid1 = H5Fopen(FILE_REF_OBJ_DEL, H5F_ACC_RDWR, H5P_DEFAULT);
+ CHECK(fid1, H5I_INVALID_HID, "H5Fopen");
/* Open the dataset */
dataset = H5Dopen2(fid1, "/Dataset2", H5P_DEFAULT);
- CHECK(ret, FAIL, "H5Dopen2");
-
- /* Open undefined reference */
- dset2 = H5Rdereference2(dataset, H5P_DEFAULT, H5R_OBJECT, &addr);
- VERIFY(dset2, FAIL, "H5Rdereference2");
+ CHECK(ret, H5I_INVALID_HID, "H5Dopen2");
/* Read selection from disk */
- HDmemset(&oref, 0, sizeof(hobj_ref_t));
- ret = H5Dread(dataset, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, &oref);
+ ret = H5Dread(dataset, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, &oref);
CHECK(ret, FAIL, "H5Dread");
/* Open deleted dataset object */
- dset2 = H5Rdereference2(dataset, H5P_DEFAULT, H5R_OBJECT, &oref);
- VERIFY(dset2, FAIL, "H5Rdereference2");
-
- /* Open nonsense reference */
- HDmemset(&oref, 0, sizeof(hobj_ref_t));
- dset2 = H5Rdereference2(dataset, H5P_DEFAULT, H5R_OBJECT, &oref);
- VERIFY(dset2, FAIL, "H5Rdereference2");
+ dset2 = H5Ropen_object((const H5R_ref_t *)&oref, H5P_DEFAULT, H5P_DEFAULT);
+ VERIFY(dset2, H5I_INVALID_HID, "H5Ropen_object");
/* Close Dataset */
ret = H5Dclose(dataset);
@@ -1304,6 +1364,10 @@ test_reference_obj_deleted(void)
/* Close file */
ret = H5Fclose(fid1);
CHECK(ret, FAIL, "H5Fclose");
+
+ /* Destroy reference */
+ ret = H5Rdestroy(&oref);
+ CHECK(ret, FAIL, "H5Rdestroy");
} /* test_reference_obj_deleted() */
/****************************************************************
@@ -1359,8 +1423,8 @@ test_reference_group(void)
hid_t gid = -1, gid2 = -1; /* Group IDs */
hid_t did; /* Dataset ID */
hid_t sid; /* Dataspace ID */
- hobj_ref_t wref; /* Reference to write */
- hobj_ref_t rref; /* Reference to read */
+ H5R_ref_t wref; /* Reference to write */
+ H5R_ref_t rref; /* Reference to read */
H5G_info_t ginfo; /* Group info struct */
char objname[NAME_SIZE]; /* Buffer to store name */
H5O_info_t oinfo; /* Object info struct */
@@ -1369,47 +1433,47 @@ test_reference_group(void)
herr_t ret;
/* Create file with a group and a dataset containing an object reference to the group */
- fid = H5Fcreate(FILE1, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(fid, FAIL, "H5Fcreate");
+ fid = H5Fcreate(FILE_REF_GRP, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(fid, H5I_INVALID_HID, "H5Fcreate");
/* Create dataspace to use for dataset */
sid = H5Screate(H5S_SCALAR);
- CHECK(sid, FAIL, "H5Screate");
+ CHECK(sid, H5I_INVALID_HID, "H5Screate");
/* Create group to refer to */
gid = H5Gcreate2(fid, GROUPNAME, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(gid, FAIL, "H5Gcreate2");
+ CHECK(gid, H5I_INVALID_HID, "H5Gcreate2");
/* Create nested groups */
gid2 = H5Gcreate2(gid, GROUPNAME2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(gid2, FAIL, "H5Gcreate2");
+ CHECK(gid2, H5I_INVALID_HID, "H5Gcreate2");
ret = H5Gclose(gid2);
CHECK(ret, FAIL, "H5Gclose");
gid2 = H5Gcreate2(gid, GROUPNAME3, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(gid2, FAIL, "H5Gcreate2");
+ CHECK(gid2, H5I_INVALID_HID, "H5Gcreate2");
ret = H5Gclose(gid2);
CHECK(ret, FAIL, "H5Gclose");
/* Create bottom dataset */
did = H5Dcreate2(gid, DSETNAME2, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- assert(did > 0);
+ CHECK(did, H5I_INVALID_HID, "H5Dcreate2");
ret = H5Dclose(did);
- assert(ret >= 0);
+ CHECK(ret, FAIL, "H5Dclose");
ret = H5Gclose(gid);
CHECK(ret, FAIL, "H5Gclose");
/* Create dataset */
- did = H5Dcreate2(fid, DSETNAME, H5T_STD_REF_OBJ, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(did, FAIL, "H5Dcreate2");
+ did = H5Dcreate2(fid, DSETNAME, H5T_STD_REF, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(did, H5I_INVALID_HID, "H5Dcreate2");
/* Create reference to group */
- ret = H5Rcreate(&wref, fid, GROUPNAME, H5R_OBJECT, (hid_t)-1);
- CHECK(ret, FAIL, "H5Rcreate");
+ ret = H5Rcreate_object(fid, GROUPNAME, &wref);
+ CHECK(ret, FAIL, "H5Rcreate_object");
/* Write reference to disk */
- ret = H5Dwrite(did, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, &wref);
+ ret = H5Dwrite(did, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, &wref);
CHECK(ret, FAIL, "H5Dwrite");
/* Close objects */
@@ -1420,22 +1484,25 @@ test_reference_group(void)
ret = H5Fclose(fid);
CHECK(ret, FAIL, "H5Fclose");
+ /* Destroy reference */
+ ret = H5Rdestroy(&wref);
+ CHECK(ret, FAIL, "H5Rdestroy");
/* Re-open file */
- fid = H5Fopen(FILE1, H5F_ACC_RDWR, H5P_DEFAULT);
- CHECK(fid, FAIL, "H5Fopen");
+ fid = H5Fopen(FILE_REF_GRP, H5F_ACC_RDWR, H5P_DEFAULT);
+ CHECK(fid, H5I_INVALID_HID, "H5Fopen");
/* Re-open dataset */
did = H5Dopen2(fid, DSETNAME, H5P_DEFAULT);
- CHECK(did, FAIL, "H5Dopen2");
+ CHECK(did, H5I_INVALID_HID, "H5Dopen2");
/* Read in the reference */
- ret = H5Dread(did, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, &rref);
+ ret = H5Dread(did, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, &rref);
CHECK(ret, FAIL, "H5Dread");
/* Dereference to get the group */
- gid = H5Rdereference2(did, H5P_DEFAULT, H5R_OBJECT, &rref);
- CHECK(gid, FAIL, "H5Rdereference2");
+ gid = H5Ropen_object((const H5R_ref_t *)&rref, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(gid, H5I_INVALID_HID, "H5Ropen_object");
/* Iterate through objects in dereferenced group */
ret = H5Literate(gid, H5_INDEX_NAME, H5_ITER_INC, NULL, test_deref_iter_op, &count);
@@ -1447,7 +1514,7 @@ test_reference_group(void)
VERIFY(ginfo.nlinks, 3, "H5Gget_info");
size = H5Lget_name_by_idx(gid, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)0, objname, (size_t)NAME_SIZE, H5P_DEFAULT);
- CHECK(size, FAIL, "H5Lget_name_by_idx");
+ CHECK(size, (-1), "H5Lget_name_by_idx");
VERIFY_STR(objname, DSETNAME2, "H5Lget_name_by_idx");
ret = H5Oget_info_by_idx2(gid, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)0, &oinfo, H5O_INFO_BASIC, H5P_DEFAULT);
@@ -1469,66 +1536,618 @@ test_reference_group(void)
CHECK(ret, FAIL, "H5Gclose");
ret = H5Fclose(fid);
CHECK(ret, FAIL, "H5Fclose");
+
+ /* Destroy reference */
+ ret = H5Rdestroy(&rref);
+ CHECK(ret, FAIL, "H5Rdestroy");
} /* test_reference_group() */
-#ifndef H5_NO_DEPRECATED_SYMBOLS
/****************************************************************
**
-** test_reference_compat(): Test basic H5R (reference) object reference code.
-** Tests deprecated API routines
+** test_reference_attr(): Test basic H5R (reference) attribute reference code.
+** Tests references to attributes on various kinds of objects
**
****************************************************************/
static void
-test_reference_compat(void)
+test_reference_attr(void)
{
- hid_t fid1; /* HDF5 File IDs */
- hid_t dataset, dset2; /* Dataset ID */
- hid_t group, group2; /* Group ID */
- hid_t sid1, /* Dataspace IDs */
- sid2;
- hid_t tid1, tid2; /* Datatype ID */
- hsize_t dims1[] = {SPACE1_DIM1},
- dims2[] = {SPACE2_DIM1, SPACE2_DIM2};
- hsize_t start[SPACE2_RANK]; /* Starting location of hyperslab */
- hsize_t stride[SPACE2_RANK]; /* Stride of hyperslab */
- hsize_t count[SPACE2_RANK]; /* Element count of hyperslab */
- hsize_t block[SPACE2_RANK]; /* Block size of hyperslab */
- hsize_t coord1[POINT1_NPOINTS][SPACE2_RANK]; /* Coordinates for point selection */
- hobj_ref_t *wbuf_obj, /* Buffer to write to disk */
- *rbuf_obj; /* Buffer read from disk */
- hdset_reg_ref_t *wbuf_reg, /* Buffer to write to disk */
- *rbuf_reg; /* Buffer read from disk */
- H5G_obj_t obj_type; /* Object type */
- herr_t ret; /* Generic return value */
+ hid_t fid; /* HDF5 File ID */
+ hid_t dataset; /* Dataset ID */
+ hid_t group; /* Group ID */
+ hid_t attr; /* Attribute ID */
+ hid_t sid; /* Dataspace ID */
+ hid_t tid; /* Datatype ID */
+ hsize_t dims[] = {SPACE1_DIM1};
+ hid_t dapl_id; /* Dataset access property list */
+ H5R_ref_t ref_wbuf[SPACE1_DIM1], /* Buffer to write to disk */
+ ref_rbuf[SPACE1_DIM1]; /* Buffer read from disk */
+ unsigned wbuf[SPACE1_DIM1], rbuf[SPACE1_DIM1];
+ unsigned *tu32; /* Temporary pointer to uint32 data */
+ int i; /* Local index variables */
+ H5O_type_t obj_type; /* Object type */
+ herr_t ret; /* Generic return value */
+
+ /* Output message about test being performed */
+ MESSAGE(5, ("Testing Attribute Reference Functions\n"));
+
+ /* Create file */
+ fid = H5Fcreate(FILE_REF_ATTR, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(fid, H5I_INVALID_HID, "H5Fcreate");
+
+ /* Create dataspace for datasets */
+ sid = H5Screate_simple(SPACE1_RANK, dims, NULL);
+ CHECK(sid, H5I_INVALID_HID, "H5Screate_simple");
+
+ /* Create dataset access property list */
+ dapl_id = H5Pcreate(H5P_DATASET_ACCESS);
+ CHECK(dapl_id, H5I_INVALID_HID, "H5Pcreate");
+
+ /* Create a group */
+ group = H5Gcreate2(fid, "Group1", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(group, H5I_INVALID_HID, "H5Gcreate2");
+
+ /* Create an attribute for the dataset */
+ attr = H5Acreate2(group, "Attr2", H5T_NATIVE_UINT, sid, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(attr, H5I_INVALID_HID, "H5Acreate2");
+
+ for(tu32 = (unsigned *)wbuf, i = 0; i < SPACE1_DIM1; i++)
+ *tu32++ = (unsigned)((i * 3) + 1);
+
+ /* Write attribute to disk */
+ ret = H5Awrite(attr, H5T_NATIVE_UINT, wbuf);
+ CHECK(ret, FAIL, "H5Awrite");
+
+ /* Close attribute */
+ ret = H5Aclose(attr);
+ CHECK(ret, FAIL, "H5Aclose");
+
+ /* Create a dataset (inside Group1) */
+ dataset = H5Dcreate2(group, "Dataset1", H5T_NATIVE_UINT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, H5I_INVALID_HID, "H5Dcreate2");
+
+ /* Create an attribute for the dataset */
+ attr = H5Acreate2(dataset, "Attr1", H5T_NATIVE_UINT, sid, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(attr, H5I_INVALID_HID, "H5Acreate2");
+
+ for(tu32 = (unsigned *)wbuf, i = 0; i < SPACE1_DIM1; i++)
+ *tu32++ = (unsigned)(i * 3);
+
+ /* Write attribute to disk */
+ ret = H5Awrite(attr, H5T_NATIVE_UINT, wbuf);
+ CHECK(ret, FAIL, "H5Awrite");
+
+ /* Close attribute */
+ ret = H5Aclose(attr);
+ CHECK(ret, FAIL, "H5Aclose");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Create another dataset (inside Group1) */
+ dataset = H5Dcreate2(group, "Dataset2", H5T_NATIVE_UCHAR, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, H5I_INVALID_HID, "H5Dcreate2");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Create a datatype to refer to */
+ tid = H5Tcreate(H5T_COMPOUND, sizeof(s1_t));
+ CHECK(tid, H5I_INVALID_HID, "H5Tcreate");
+
+ /* Insert fields */
+ ret = H5Tinsert(tid, "a", HOFFSET(s1_t,a), H5T_NATIVE_INT);
+ CHECK(ret, FAIL, "H5Tinsert");
+
+ ret = H5Tinsert(tid, "b", HOFFSET(s1_t,b), H5T_NATIVE_INT);
+ CHECK(ret, FAIL, "H5Tinsert");
+
+ ret = H5Tinsert(tid, "c", HOFFSET(s1_t,c), H5T_NATIVE_FLOAT);
+ CHECK(ret, FAIL, "H5Tinsert");
+
+ /* Save datatype for later */
+ ret = H5Tcommit2(group, "Datatype1", tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(ret, FAIL, "H5Tcommit2");
+
+ /* Create an attribute for the datatype */
+ attr = H5Acreate2(tid, "Attr3", H5T_NATIVE_UINT, sid, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(attr, H5I_INVALID_HID, "H5Acreate2");
+
+ for(tu32 = (unsigned *)wbuf, i = 0; i < SPACE1_DIM1; i++)
+ *tu32++ = (unsigned)((i * 3) + 2);
+
+ /* Write attribute to disk */
+ ret = H5Awrite(attr, H5T_NATIVE_UINT, wbuf);
+ CHECK(ret, FAIL, "H5Awrite");
+
+ /* Close attribute */
+ ret = H5Aclose(attr);
+ CHECK(ret, FAIL, "H5Aclose");
+
+ /* Close datatype */
+ ret = H5Tclose(tid);
+ CHECK(ret, FAIL, "H5Tclose");
+
+ /* Close group */
+ ret = H5Gclose(group);
+ CHECK(ret, FAIL, "H5Gclose");
+
+ /* Create a dataset */
+ dataset = H5Dcreate2(fid, "Dataset3", H5T_STD_REF, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, H5I_INVALID_HID, "H5Dcreate2");
+
+ /* Create reference to dataset1 attribute */
+ ret = H5Rcreate_attr(fid, "/Group1/Dataset1", "Attr1", &ref_wbuf[0]);
+ CHECK(ret, FAIL, "H5Rcreate_attr");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&ref_wbuf[0], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
+
+ /* Create reference to dataset2 attribute */
+ ret = H5Rcreate_attr(fid, "/Group1/Dataset2", "Attr1", &ref_wbuf[1]);
+ CHECK(ret, FAIL, "H5Rcreate_attr");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&ref_wbuf[1], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
+
+ /* Create reference to group attribute */
+ ret = H5Rcreate_attr(fid, "/Group1", "Attr2", &ref_wbuf[2]);
+ CHECK(ret, FAIL, "H5Rcreate_attr");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&ref_wbuf[2], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_GROUP, "H5Rget_obj_type3");
+
+ /* Create reference to named datatype attribute */
+ ret = H5Rcreate_attr(fid, "/Group1/Datatype1", "Attr3", &ref_wbuf[3]);
+ CHECK(ret, FAIL, "H5Rcreate_attr");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&ref_wbuf[3], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_NAMED_DATATYPE, "H5Rget_obj_type3");
+
+ /* Write selection to disk */
+ ret = H5Dwrite(dataset, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, ref_wbuf);
+ CHECK(ret, FAIL, "H5Dwrite");
+
+ /* Close disk dataspace */
+ ret = H5Sclose(sid);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close file */
+ ret = H5Fclose(fid);
+ CHECK(ret, FAIL, "H5Fclose");
+
+ /* Re-open the file */
+ fid = H5Fopen(FILE_REF_ATTR, H5F_ACC_RDWR, H5P_DEFAULT);
+ CHECK(fid, FAIL, "H5Fopen");
+
+ /* Open the dataset */
+ dataset = H5Dopen2(fid, "/Dataset3", H5P_DEFAULT);
+ CHECK(ret, H5I_INVALID_HID, "H5Dopen2");
+
+ /* Read selection from disk */
+ ret = H5Dread(dataset, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, ref_rbuf);
+ CHECK(ret, FAIL, "H5Dread");
+
+ /* Open attribute on dataset object */
+ attr = H5Ropen_attr((const H5R_ref_t *)&ref_rbuf[0], H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(attr, H5I_INVALID_HID, "H5Ropen_attr");
+
+ /* Check information in referenced dataset */
+ sid = H5Aget_space(attr);
+ CHECK(sid, H5I_INVALID_HID, "H5Aget_space");
+
+ ret = (int)H5Sget_simple_extent_npoints(sid);
+ VERIFY(ret, SPACE1_DIM1, "H5Sget_simple_extent_npoints");
+
+ /* Read from disk */
+ ret = H5Aread(attr, H5T_NATIVE_UINT, rbuf);
+ CHECK(ret, FAIL, "H5Aread");
+
+ for(tu32 = (unsigned *)rbuf, i = 0; i < SPACE1_DIM1; i++, tu32++)
+ VERIFY(*tu32, (uint32_t)(i * 3), "Data");
+
+ /* Close dereferenced Dataset */
+ ret = H5Aclose(attr);
+ CHECK(ret, FAIL, "H5Aclose");
+
+ /* Open attribute on group object */
+ attr = H5Ropen_attr((const H5R_ref_t *)&ref_rbuf[2], H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(attr, H5I_INVALID_HID, "H5Ropen_attr");
+
+ /* Read from disk */
+ ret = H5Aread(attr, H5T_NATIVE_UINT, rbuf);
+ CHECK(ret, FAIL, "H5Aread");
+
+ for(tu32 = (unsigned *)rbuf, i = 0; i < SPACE1_DIM1; i++, tu32++)
+ VERIFY(*tu32, (uint32_t)((i * 3) + 1), "Data");
+
+ /* Close attribute */
+ ret = H5Aclose(attr);
+ CHECK(ret, FAIL, "H5Aclose");
+
+ /* Open attribute on named datatype object */
+ attr = H5Ropen_attr((const H5R_ref_t *)&ref_rbuf[3], H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(attr, H5I_INVALID_HID, "H5Ropen_attr");
+
+ /* Read from disk */
+ ret = H5Aread(attr, H5T_NATIVE_UINT, rbuf);
+ CHECK(ret, FAIL, "H5Aread");
+
+ for(tu32 = (unsigned *)rbuf, i = 0; i < SPACE1_DIM1; i++, tu32++)
+ VERIFY(*tu32, (uint32_t)((i * 3) + 2), "Data");
+
+ /* Close attribute */
+ ret = H5Aclose(attr);
+ CHECK(ret, FAIL, "H5Aclose");
+
+ /* Close dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close dataset access property list */
+ ret = H5Pclose(dapl_id);
+ CHECK(ret, FAIL, "H5Pclose");
+
+ /* Close file */
+ ret = H5Fclose(fid);
+ CHECK(ret, FAIL, "H5Fclose");
+
+ /* Free memory buffers */
+ for (i = 0; i < SPACE1_DIM1; i++) {
+ ret = H5Rdestroy(&ref_wbuf[i]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ ret = H5Rdestroy(&ref_rbuf[i]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ }
+} /* test_reference_attr() */
+
+/****************************************************************
+**
+** test_reference_external():
+** Tests external references on various kinds of objects
+**
+****************************************************************/
+static void
+test_reference_external(void)
+{
+ hid_t fid1, fid2; /* HDF5 File ID */
+ hid_t dataset; /* Dataset ID */
+ hid_t group; /* Group ID */
+ hid_t attr; /* Attribute ID */
+ hid_t sid; /* Dataspace ID */
+ hid_t tid; /* Datatype ID */
+ hsize_t dims[] = {SPACE1_DIM1};
+ hid_t dapl_id; /* Dataset access property list */
+ H5R_ref_t ref_wbuf[SPACE1_DIM1], /* Buffer to write to disk */
+ ref_rbuf[SPACE1_DIM1]; /* Buffer read from disk */
+ unsigned wbuf[SPACE1_DIM1], rbuf[SPACE1_DIM1];
+ unsigned *tu32; /* Temporary pointer to uint32 data */
+ int i; /* Local index variables */
+ H5O_type_t obj_type; /* Object type */
+ herr_t ret; /* Generic return value */
+
+ /* Output message about test being performed */
+ MESSAGE(5, ("Testing External References Functions\n"));
+
+ /* Create file */
+ fid1 = H5Fcreate(FILE_REF_EXT1, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(fid1, H5I_INVALID_HID, "H5Fcreate");
+
+ /* Create dataspace for datasets */
+ sid = H5Screate_simple(SPACE1_RANK, dims, NULL);
+ CHECK(sid, H5I_INVALID_HID, "H5Screate_simple");
+
+ /* Create dataset access property list */
+ dapl_id = H5Pcreate(H5P_DATASET_ACCESS);
+ CHECK(dapl_id, H5I_INVALID_HID, "H5Pcreate");
+
+ /* Create a group */
+ group = H5Gcreate2(fid1, "Group1", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(group, H5I_INVALID_HID, "H5Gcreate2");
+
+ /* Create an attribute for the dataset */
+ attr = H5Acreate2(group, "Attr2", H5T_NATIVE_UINT, sid, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(attr, H5I_INVALID_HID, "H5Acreate2");
+
+ for(tu32 = (unsigned *)wbuf, i = 0; i < SPACE1_DIM1; i++)
+ *tu32++ = (unsigned)((i * 3) + 1);
+
+ /* Write attribute to disk */
+ ret = H5Awrite(attr, H5T_NATIVE_UINT, wbuf);
+ CHECK(ret, FAIL, "H5Awrite");
+
+ /* Close attribute */
+ ret = H5Aclose(attr);
+ CHECK(ret, FAIL, "H5Aclose");
+
+ /* Create a dataset (inside Group1) */
+ dataset = H5Dcreate2(group, "Dataset1", H5T_NATIVE_UINT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, H5I_INVALID_HID, "H5Dcreate2");
+
+ /* Create an attribute for the dataset */
+ attr = H5Acreate2(dataset, "Attr1", H5T_NATIVE_UINT, sid, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(attr, H5I_INVALID_HID, "H5Acreate2");
+
+ for(tu32 = (unsigned *)wbuf, i = 0; i < SPACE1_DIM1; i++)
+ *tu32++ = (unsigned)(i * 3);
+
+ /* Write attribute to disk */
+ ret = H5Awrite(attr, H5T_NATIVE_UINT, wbuf);
+ CHECK(ret, FAIL, "H5Awrite");
+
+ /* Close attribute */
+ ret = H5Aclose(attr);
+ CHECK(ret, FAIL, "H5Aclose");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Create another dataset (inside Group1) */
+ dataset = H5Dcreate2(group, "Dataset2", H5T_NATIVE_UCHAR, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, H5I_INVALID_HID, "H5Dcreate2");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Create a datatype to refer to */
+ tid = H5Tcreate(H5T_COMPOUND, sizeof(s1_t));
+ CHECK(tid, H5I_INVALID_HID, "H5Tcreate");
+
+ /* Insert fields */
+ ret = H5Tinsert(tid, "a", HOFFSET(s1_t,a), H5T_NATIVE_INT);
+ CHECK(ret, FAIL, "H5Tinsert");
+
+ ret = H5Tinsert(tid, "b", HOFFSET(s1_t,b), H5T_NATIVE_INT);
+ CHECK(ret, FAIL, "H5Tinsert");
+
+ ret = H5Tinsert(tid, "c", HOFFSET(s1_t,c), H5T_NATIVE_FLOAT);
+ CHECK(ret, FAIL, "H5Tinsert");
+
+ /* Save datatype for later */
+ ret = H5Tcommit2(group, "Datatype1", tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(ret, FAIL, "H5Tcommit2");
+
+ /* Create an attribute for the datatype */
+ attr = H5Acreate2(tid, "Attr3", H5T_NATIVE_UINT, sid, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(attr, H5I_INVALID_HID, "H5Acreate2");
+
+ for(tu32 = (unsigned *)wbuf, i = 0; i < SPACE1_DIM1; i++)
+ *tu32++ = (unsigned)((i * 3) + 2);
+
+ /* Write attribute to disk */
+ ret = H5Awrite(attr, H5T_NATIVE_UINT, wbuf);
+ CHECK(ret, FAIL, "H5Awrite");
+
+ /* Close attribute */
+ ret = H5Aclose(attr);
+ CHECK(ret, FAIL, "H5Aclose");
+
+ /* Close datatype */
+ ret = H5Tclose(tid);
+ CHECK(ret, FAIL, "H5Tclose");
+
+ /* Close group */
+ ret = H5Gclose(group);
+ CHECK(ret, FAIL, "H5Gclose");
+
+ /* Create reference to dataset1 attribute */
+ ret = H5Rcreate_attr(fid1, "/Group1/Dataset1", "Attr1", &ref_wbuf[0]);
+ CHECK(ret, FAIL, "H5Rcreate_attr");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&ref_wbuf[0], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
+
+ /* Create reference to dataset2 attribute */
+ ret = H5Rcreate_attr(fid1, "/Group1/Dataset2", "Attr1", &ref_wbuf[1]);
+ CHECK(ret, FAIL, "H5Rcreate_attr");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&ref_wbuf[1], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
+
+ /* Create reference to group attribute */
+ ret = H5Rcreate_attr(fid1, "/Group1", "Attr2", &ref_wbuf[2]);
+ CHECK(ret, FAIL, "H5Rcreate_attr");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&ref_wbuf[2], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_GROUP, "H5Rget_obj_type3");
+
+ /* Create reference to named datatype attribute */
+ ret = H5Rcreate_attr(fid1, "/Group1/Datatype1", "Attr3", &ref_wbuf[3]);
+ CHECK(ret, FAIL, "H5Rcreate_attr");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&ref_wbuf[3], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_NAMED_DATATYPE, "H5Rget_obj_type3");
+
+ /* Close disk dataspace */
+ ret = H5Sclose(sid);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+
+ /* Create file */
+ fid2 = H5Fcreate(FILE_REF_EXT2, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(fid2, H5I_INVALID_HID, "H5Fcreate");
+
+ /* Create dataspace for datasets */
+ sid = H5Screate_simple(SPACE1_RANK, dims, NULL);
+ CHECK(sid, H5I_INVALID_HID, "H5Screate_simple");
+
+ /* Create a dataset */
+ dataset = H5Dcreate2(fid2, "Dataset3", H5T_STD_REF, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, H5I_INVALID_HID, "H5Dcreate2");
+
+ /* Write selection to disk */
+ ret = H5Dwrite(dataset, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, ref_wbuf);
+ CHECK(ret, FAIL, "H5Dwrite");
+
+ /* Close disk dataspace */
+ ret = H5Sclose(sid);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close file */
+ ret = H5Fclose(fid2);
+ CHECK(ret, FAIL, "H5Fclose");
+
+ /* Re-open the file */
+ fid2 = H5Fopen(FILE_REF_EXT2, H5F_ACC_RDWR, H5P_DEFAULT);
+ CHECK(fid2, FAIL, "H5Fopen");
+
+ /* Open the dataset */
+ dataset = H5Dopen2(fid2, "/Dataset3", H5P_DEFAULT);
+ CHECK(ret, H5I_INVALID_HID, "H5Dopen2");
+
+ /* Read selection from disk */
+ ret = H5Dread(dataset, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, ref_rbuf);
+ CHECK(ret, FAIL, "H5Dread");
+
+ /* Open attribute on dataset object */
+ attr = H5Ropen_attr((const H5R_ref_t *)&ref_rbuf[0], H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(attr, H5I_INVALID_HID, "H5Ropen_attr");
+
+ /* Check information in referenced dataset */
+ sid = H5Aget_space(attr);
+ CHECK(sid, H5I_INVALID_HID, "H5Aget_space");
+
+ ret = (int)H5Sget_simple_extent_npoints(sid);
+ VERIFY(ret, SPACE1_DIM1, "H5Sget_simple_extent_npoints");
+
+ /* Read from disk */
+ ret = H5Aread(attr, H5T_NATIVE_UINT, rbuf);
+ CHECK(ret, FAIL, "H5Aread");
+
+ for(tu32 = (unsigned *)rbuf, i = 0; i < SPACE1_DIM1; i++, tu32++)
+ VERIFY(*tu32, (uint32_t)(i * 3), "Data");
+
+ /* Close dereferenced Dataset */
+ ret = H5Aclose(attr);
+ CHECK(ret, FAIL, "H5Aclose");
+
+ /* Open attribute on group object */
+ attr = H5Ropen_attr((const H5R_ref_t *)&ref_rbuf[2], H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(attr, H5I_INVALID_HID, "H5Ropen_attr");
+
+ /* Read from disk */
+ ret = H5Aread(attr, H5T_NATIVE_UINT, rbuf);
+ CHECK(ret, FAIL, "H5Aread");
+
+ for(tu32 = (unsigned *)rbuf, i = 0; i < SPACE1_DIM1; i++, tu32++)
+ VERIFY(*tu32, (uint32_t)((i * 3) + 1), "Data");
+
+ /* Close attribute */
+ ret = H5Aclose(attr);
+ CHECK(ret, FAIL, "H5Aclose");
+
+ /* Open attribute on named datatype object */
+ attr = H5Ropen_attr((const H5R_ref_t *)&ref_rbuf[3], H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(attr, H5I_INVALID_HID, "H5Ropen_attr");
+
+ /* Read from disk */
+ ret = H5Aread(attr, H5T_NATIVE_UINT, rbuf);
+ CHECK(ret, FAIL, "H5Aread");
+
+ for(tu32 = (unsigned *)rbuf, i = 0; i < SPACE1_DIM1; i++, tu32++)
+ VERIFY(*tu32, (uint32_t)((i * 3) + 2), "Data");
+
+ /* Close attribute */
+ ret = H5Aclose(attr);
+ CHECK(ret, FAIL, "H5Aclose");
+
+ /* Close dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close dataset access property list */
+ ret = H5Pclose(dapl_id);
+ CHECK(ret, FAIL, "H5Pclose");
+
+ /* Close file */
+ ret = H5Fclose(fid2);
+ CHECK(ret, FAIL, "H5Fclose");
+
+ /* Free memory buffers */
+ for (i = 0; i < SPACE1_DIM1; i++) {
+ ret = H5Rdestroy(&ref_wbuf[i]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ ret = H5Rdestroy(&ref_rbuf[i]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ }
+} /* test_reference_external() */
+
+/****************************************************************
+**
+** test_reference_compat_conv(): Test basic H5R (reference) object reference code.
+** Tests deprecated API routines and type conversion.
+**
+****************************************************************/
+static void
+test_reference_compat_conv(void)
+{
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t dataset, dset2; /* Dataset ID */
+ hid_t group, group2; /* Group ID */
+ hid_t sid1, sid2, sid3; /* Dataspace IDs */
+ hid_t tid1, tid2; /* Datatype ID */
+ hsize_t dims1[] = {SPACE1_DIM1},
+ dims2[] = {SPACE2_DIM1, SPACE2_DIM2},
+ dims3[] = {2};
+ hsize_t start[SPACE2_RANK]; /* Starting location of hyperslab */
+ hsize_t stride[SPACE2_RANK];/* Stride of hyperslab */
+ hsize_t count[SPACE2_RANK]; /* Element count of hyperslab */
+ hsize_t block[SPACE2_RANK]; /* Block size of hyperslab */
+ hsize_t coord1[POINT1_NPOINTS][SPACE2_RANK]; /* Coordinates for point selection */
+ hobj_ref_t *wbuf_obj; /* Buffer to write to disk */
+ H5R_ref_t *rbuf_obj; /* Buffer read from disk */
+ hdset_reg_ref_t *wbuf_reg; /* Buffer to write to disk */
+ H5R_ref_t *rbuf_reg; /* Buffer read from disk */
+ H5O_type_t obj_type; /* Object type */
+ herr_t ret; /* Generic return value */
+ unsigned int i; /* Counter */
/* Output message about test being performed */
MESSAGE(5, ("Testing Deprecated Object Reference Functions\n"));
/* Allocate write & read buffers */
wbuf_obj = (hobj_ref_t *)HDcalloc(sizeof(hobj_ref_t), SPACE1_DIM1);
- rbuf_obj = (hobj_ref_t *)HDmalloc(sizeof(hobj_ref_t) * SPACE1_DIM1);
- wbuf_reg = (hdset_reg_ref_t *)HDcalloc(sizeof(hdset_reg_ref_t), SPACE1_DIM1);
- rbuf_reg = (hdset_reg_ref_t *)HDmalloc(sizeof(hdset_reg_ref_t) * SPACE1_DIM1);
+ rbuf_obj = (H5R_ref_t *)HDcalloc(sizeof(H5R_ref_t), SPACE1_DIM1);
+ wbuf_reg = (hdset_reg_ref_t *)HDcalloc(sizeof(hdset_reg_ref_t), 2);
+ rbuf_reg = (H5R_ref_t *)HDcalloc(sizeof(H5R_ref_t), 2);
/* Create file */
- fid1 = H5Fcreate(FILE1, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(fid1, FAIL, "H5Fcreate");
+ fid1 = H5Fcreate(FILE_REF_COMPAT, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(fid1, H5I_INVALID_HID, "H5Fcreate");
/* Create dataspace for datasets */
sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL);
- CHECK(sid1, FAIL, "H5Screate_simple");
+ CHECK(sid1, H5I_INVALID_HID, "H5Screate_simple");
/* Create another dataspace for datasets */
sid2 = H5Screate_simple(SPACE2_RANK, dims2, NULL);
- CHECK(sid2, FAIL, "H5Screate_simple");
+ CHECK(sid2, H5I_INVALID_HID, "H5Screate_simple");
+
+ /* Create another dataspace for datasets */
+ sid3 = H5Screate_simple(SPACE1_RANK, dims3, NULL);
+ CHECK(sid3, H5I_INVALID_HID, "H5Screate_simple");
/* Create a group */
group = H5Gcreate2(fid1, "Group1", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(group, FAIL, "H5Gcreate2");
+ CHECK(group, H5I_INVALID_HID, "H5Gcreate2");
/* Create a dataset (inside Group1) */
dataset = H5Dcreate2(group, "Dataset1", H5T_NATIVE_UINT, sid2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(dataset, FAIL, "H5Dcreate2");
+ CHECK(dataset, H5I_INVALID_HID, "H5Dcreate2");
/* Close Dataset */
ret = H5Dclose(dataset);
@@ -1536,7 +2155,7 @@ test_reference_compat(void)
/* Create another dataset (inside Group1) */
dataset = H5Dcreate2(group, "Dataset2", H5T_NATIVE_UCHAR, sid2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(dataset, FAIL, "H5Dcreate2");
+ CHECK(dataset, H5I_INVALID_HID, "H5Dcreate2");
/* Close Dataset */
ret = H5Dclose(dataset);
@@ -1544,7 +2163,7 @@ test_reference_compat(void)
/* Create a datatype to refer to */
tid1 = H5Tcreate(H5T_COMPOUND, sizeof(s1_t));
- CHECK(tid1, FAIL, "H5Tcreate");
+ CHECK(tid1, H5I_INVALID_HID, "H5Tcreate");
/* Insert fields */
ret = H5Tinsert(tid1, "a", HOFFSET(s1_t,a), H5T_NATIVE_INT);
@@ -1568,25 +2187,24 @@ test_reference_compat(void)
ret = H5Gclose(group);
CHECK(ret, FAIL, "H5Gclose");
-
/* Create a dataset with object reference datatype */
dataset = H5Dcreate2(fid1, "Dataset3", H5T_STD_REF_OBJ, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(ret, FAIL, "H5Dcreate2");
+ CHECK(dataset, H5I_INVALID_HID, "H5Dcreate2");
/* Create reference to dataset */
- ret = H5Rcreate(&wbuf_obj[0], fid1, "/Group1/Dataset1", H5R_OBJECT, (hid_t)-1);
+ ret = H5Rcreate(&wbuf_obj[0], fid1, "/Group1/Dataset1", H5R_OBJECT, H5I_INVALID_HID);
CHECK(ret, FAIL, "H5Rcreate");
/* Create reference to dataset */
- ret = H5Rcreate(&wbuf_obj[1], fid1, "/Group1/Dataset2", H5R_OBJECT, (hid_t)-1);
+ ret = H5Rcreate(&wbuf_obj[1], fid1, "/Group1/Dataset2", H5R_OBJECT, H5I_INVALID_HID);
CHECK(ret, FAIL, "H5Rcreate");
/* Create reference to group */
- ret = H5Rcreate(&wbuf_obj[2], fid1, "/Group1", H5R_OBJECT, (hid_t)-1);
+ ret = H5Rcreate(&wbuf_obj[2], fid1, "/Group1", H5R_OBJECT, H5I_INVALID_HID);
CHECK(ret, FAIL, "H5Rcreate");
/* Create reference to named datatype */
- ret = H5Rcreate(&wbuf_obj[3], fid1, "/Group1/Datatype1", H5R_OBJECT, (hid_t)-1);
+ ret = H5Rcreate(&wbuf_obj[3], fid1, "/Group1/Datatype1", H5R_OBJECT, H5I_INVALID_HID);
CHECK(ret, FAIL, "H5Rcreate");
/* Write references to disk */
@@ -1597,16 +2215,19 @@ test_reference_compat(void)
ret = H5Dclose(dataset);
CHECK(ret, FAIL, "H5Dclose");
-
/* Create a dataset with region reference datatype */
- dataset = H5Dcreate2(fid1, "Dataset4", H5T_STD_REF_DSETREG, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- CHECK(ret, FAIL, "H5Dcreate2");
+ dataset = H5Dcreate2(fid1, "Dataset4", H5T_STD_REF_DSETREG, sid3, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, FAIL, "H5Dcreate2");
/* Select 6x6 hyperslab for first reference */
- start[0] = 2; start[1] = 2;
- stride[0] = 1; stride[1] = 1;
- count[0] = 1; count[1] = 1;
- block[0] = 6; block[1] = 6;
+ start[0] = 2;
+ start[1] = 2;
+ stride[0] = 1;
+ stride[1] = 1;
+ count[0] = 1;
+ count[1] = 1;
+ block[0] = 6;
+ block[1] = 6;
ret = H5Sselect_hyperslab(sid2, H5S_SELECT_SET, start, stride, count, block);
CHECK(ret, FAIL, "H5Sselect_hyperslab");
@@ -1640,69 +2261,69 @@ test_reference_compat(void)
ret = H5Dclose(dataset);
CHECK(ret, FAIL, "H5Dclose");
-
/* Close disk dataspaces */
ret = H5Sclose(sid1);
CHECK(ret, FAIL, "H5Sclose");
ret = H5Sclose(sid2);
CHECK(ret, FAIL, "H5Sclose");
+ ret = H5Sclose(sid3);
+ CHECK(ret, FAIL, "H5Sclose");
/* Close file */
ret = H5Fclose(fid1);
CHECK(ret, FAIL, "H5Fclose");
-
/* Re-open the file */
- fid1 = H5Fopen(FILE1, H5F_ACC_RDWR, H5P_DEFAULT);
+ fid1 = H5Fopen(FILE_REF_COMPAT, H5F_ACC_RDWR, H5P_DEFAULT);
CHECK(fid1, FAIL, "H5Fopen");
/* Open the object reference dataset */
dataset = H5Dopen2(fid1, "/Dataset3", H5P_DEFAULT);
- CHECK(ret, FAIL, "H5Dopen2");
+ CHECK(dataset, FAIL, "H5Dopen2");
/* Read selection from disk */
- ret = H5Dread(dataset, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf_obj);
+ ret = H5Dread(dataset, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf_obj);
CHECK(ret, FAIL, "H5Dread");
/* Verify type of objects pointed at */
- obj_type = H5Rget_obj_type1(dataset, H5R_OBJECT, &rbuf_obj[0]);
- CHECK(obj_type, H5G_UNKNOWN, "H5Rget_obj_type1");
- VERIFY(obj_type, H5G_DATASET, "H5Rget_obj_type1");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&rbuf_obj[0], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
- obj_type = H5Rget_obj_type1(dataset, H5R_OBJECT, &rbuf_obj[1]);
- CHECK(obj_type, H5G_UNKNOWN, "H5Rget_obj_type1");
- VERIFY(obj_type, H5G_DATASET, "H5Rget_obj_type1");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&rbuf_obj[1], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
- obj_type = H5Rget_obj_type1(dataset, H5R_OBJECT, &rbuf_obj[2]);
- CHECK(obj_type, H5G_UNKNOWN, "H5Rget_obj_type1");
- VERIFY(obj_type, H5G_GROUP, "H5Rget_obj_type1");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&rbuf_obj[2], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_GROUP, "H5Rget_obj_type3");
- obj_type = H5Rget_obj_type1(dataset, H5R_OBJECT, &rbuf_obj[3]);
- CHECK(obj_type, H5G_UNKNOWN, "H5Rget_obj_type1");
- VERIFY(obj_type, H5G_TYPE, "H5Rget_obj_type1");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&rbuf_obj[3], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_NAMED_DATATYPE, "H5Rget_obj_type3");
/* Make sure the referenced objects can be opened */
- dset2 = H5Rdereference1(dataset, H5R_OBJECT, &rbuf_obj[0]);
- CHECK(dset2, FAIL, "H5Rdereference1");
+ dset2 = H5Ropen_object((const H5R_ref_t *)&rbuf_obj[0], H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dset2, H5I_INVALID_HID, "H5Ropen_object");
ret = H5Dclose(dset2);
CHECK(ret, FAIL, "H5Dclose");
- dset2 = H5Rdereference1(dataset, H5R_OBJECT, &rbuf_obj[1]);
- CHECK(dset2, FAIL, "H5Rdereference1");
+ dset2 = H5Ropen_object((const H5R_ref_t *)&rbuf_obj[1], H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dset2, H5I_INVALID_HID, "H5Ropen_object");
ret = H5Dclose(dset2);
CHECK(ret, FAIL, "H5Dclose");
- group2 = H5Rdereference1(dataset, H5R_OBJECT, &rbuf_obj[2]);
- CHECK(group2, FAIL, "H5Rdereference1");
+ group2 = H5Ropen_object((const H5R_ref_t *)&rbuf_obj[2], H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(group2, H5I_INVALID_HID, "H5Ropen_object");
ret = H5Gclose(group2);
CHECK(ret, FAIL, "H5Gclose");
- tid2 = H5Rdereference1(dataset, H5R_OBJECT, &rbuf_obj[3]);
- CHECK(tid2, FAIL, "H5Rdereference1");
+ tid2 = H5Ropen_object((const H5R_ref_t *)&rbuf_obj[3], H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(tid2, H5I_INVALID_HID, "H5Ropen_object");
ret = H5Tclose(tid2);
CHECK(ret, FAIL, "H5Tclose");
@@ -1714,36 +2335,30 @@ test_reference_compat(void)
/* Open the dataset region reference dataset */
dataset = H5Dopen2(fid1, "/Dataset4", H5P_DEFAULT);
- CHECK(ret, FAIL, "H5Dopen2");
+ CHECK(ret, H5I_INVALID_HID, "H5Dopen2");
/* Read selection from disk */
- ret = H5Dread(dataset, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf_reg);
+ ret = H5Dread(dataset, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf_reg);
CHECK(ret, FAIL, "H5Dread");
/* Verify type of objects pointed at */
- obj_type = H5Rget_obj_type1(dataset, H5R_DATASET_REGION, &rbuf_reg[0]);
- CHECK(obj_type, H5G_UNKNOWN, "H5Rget_obj_type1");
- VERIFY(obj_type, H5G_DATASET, "H5Rget_obj_type1");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&rbuf_reg[0], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
- obj_type = H5Rget_obj_type1(dataset, H5R_DATASET_REGION, &rbuf_reg[1]);
- CHECK(obj_type, H5G_UNKNOWN, "H5Rget_obj_type1");
- VERIFY(obj_type, H5G_DATASET, "H5Rget_obj_type1");
-
- obj_type = H5Rget_obj_type1(dataset, H5R_DATASET_REGION, &rbuf_reg[2]);
- VERIFY(obj_type, H5G_UNKNOWN, "H5Rget_obj_type1");
-
- obj_type = H5Rget_obj_type1(dataset, H5R_DATASET_REGION, &rbuf_reg[3]);
- VERIFY(obj_type, H5G_UNKNOWN, "H5Rget_obj_type1");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&rbuf_reg[1], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
/* Make sure the referenced objects can be opened */
- dset2 = H5Rdereference1(dataset, H5R_DATASET_REGION, &rbuf_reg[0]);
- CHECK(dset2, FAIL, "H5Rdereference1");
+ dset2 = H5Ropen_object((const H5R_ref_t *)&rbuf_reg[0], H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dset2, H5I_INVALID_HID, "H5Ropen_object");
ret = H5Dclose(dset2);
CHECK(ret, FAIL, "H5Dclose");
- dset2 = H5Rdereference1(dataset, H5R_DATASET_REGION, &rbuf_reg[1]);
- CHECK(dset2, FAIL, "H5Rdereference1");
+ dset2 = H5Ropen_object((const H5R_ref_t *)&rbuf_reg[1], H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dset2, H5I_INVALID_HID, "H5Ropen_object");
ret = H5Dclose(dset2);
CHECK(ret, FAIL, "H5Dclose");
@@ -1756,13 +2371,424 @@ test_reference_compat(void)
ret = H5Fclose(fid1);
CHECK(ret, FAIL, "H5Fclose");
+ /* Destroy references */
+ for(i = 0; i < dims1[0]; i++) {
+ ret = H5Rdestroy(&rbuf_obj[i]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ }
+ for(i = 0; i < dims3[0]; i++) {
+ ret = H5Rdestroy(&rbuf_reg[i]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ }
+
/* Free memory buffers */
HDfree(wbuf_obj);
HDfree(rbuf_obj);
HDfree(wbuf_reg);
HDfree(rbuf_reg);
} /* test_reference_compat() */
-#endif /* H5_NO_DEPRECATED_SYMBOLS */
+
+/****************************************************************
+**
+** test_reference_perf(): Test basic H5R (reference) object reference
+** performance.
+**
+****************************************************************/
+static void
+test_reference_perf(void)
+{
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t dataset, /* Dataset ID */
+ dset2; /* Dereferenced dataset ID */
+ hid_t group; /* Group ID */
+ hid_t sid1; /* Dataspace ID */
+ hid_t tid1; /* Datatype ID */
+ hsize_t dims1[] = {1};
+ hid_t dapl_id; /* Dataset access property list */
+ H5R_ref_t *wbuf, /* buffer to write to disk */
+ *rbuf, /* buffer read from disk */
+ *tbuf; /* temp. buffer read from disk */
+ H5R_ref_t *wbuf_reg, /* buffer to write to disk */
+ *rbuf_reg; /* buffer read from disk */
+ hobj_ref_t *wbuf_deprec,/* deprecated references */
+ *rbuf_deprec;/* deprecated references */
+ hdset_reg_ref_t *wbuf_reg_deprec, /* deprecated references*/
+ *rbuf_reg_deprec; /* deprecated references*/
+ unsigned *tu32; /* Temporary pointer to uint32 data */
+ int i, j; /* Counters */
+ H5O_type_t obj_type; /* Object type */
+ herr_t ret; /* Generic return value */
+ double t1, t2, t; /* Timers */
+
+ /* Output message about test being performed */
+ MESSAGE(5, ("Testing Object Reference Performance\n"));
+
+ /* Allocate write & read buffers */
+ wbuf = (H5R_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(H5R_ref_t)), SPACE1_DIM1);
+ wbuf_deprec = (hobj_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(hobj_ref_t)), SPACE1_DIM1);
+ rbuf = (H5R_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(H5R_ref_t)), SPACE1_DIM1);
+ rbuf_deprec = (hobj_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(hobj_ref_t)), SPACE1_DIM1);
+ tbuf = (H5R_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(H5R_ref_t)), SPACE1_DIM1);
+ wbuf_reg = (H5R_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(H5R_ref_t)), SPACE1_DIM1);
+ rbuf_reg = (H5R_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(H5R_ref_t)), SPACE1_DIM1);
+ wbuf_reg_deprec = (hdset_reg_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(hdset_reg_ref_t)), SPACE1_DIM1);
+ rbuf_reg_deprec = (hdset_reg_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(hdset_reg_ref_t)), SPACE1_DIM1);
+
+ for(tu32 = (unsigned *)wbuf, i = 0; i < SPACE1_DIM1; i++)
+ *tu32++ = (unsigned)i * 3;
+
+ /* Create file */
+ fid1 = H5Fcreate(FILE_REF_OBJ, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(fid1, H5I_INVALID_HID, "H5Fcreate");
+
+ /* Create dataspace for datasets */
+ sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL);
+ CHECK(sid1, H5I_INVALID_HID, "H5Screate_simple");
+
+ /* Create dataset access property list */
+ dapl_id = H5Pcreate(H5P_DATASET_ACCESS);
+ CHECK(dapl_id, H5I_INVALID_HID, "H5Pcreate");
+
+ /* Create a group */
+ group = H5Gcreate2(fid1, "Group1", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(group, H5I_INVALID_HID, "H5Gcreate2");
+
+ /* Create a dataset (inside Group1) */
+ dataset = H5Dcreate2(group, "Dataset1", H5T_NATIVE_UINT, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, H5I_INVALID_HID, "H5Dcreate2");
+
+ /* Write selection to disk */
+ ret = H5Dwrite(dataset, H5T_NATIVE_UINT, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf);
+ CHECK(ret, FAIL, "H5Dwrite");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Create another dataset (inside Group1) */
+ dataset = H5Dcreate2(group, "Dataset2", H5T_NATIVE_UCHAR, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, FAIL, "H5Dcreate2");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Create a datatype to refer to */
+ tid1 = H5Tcreate(H5T_COMPOUND, sizeof(s1_t));
+ CHECK(tid1, H5I_INVALID_HID, "H5Tcreate");
+
+ /* Insert fields */
+ ret = H5Tinsert(tid1, "a", HOFFSET(s1_t,a), H5T_NATIVE_INT);
+ CHECK(ret, FAIL, "H5Tinsert");
+
+ ret = H5Tinsert(tid1, "b", HOFFSET(s1_t,b), H5T_NATIVE_INT);
+ CHECK(ret, FAIL, "H5Tinsert");
+
+ ret = H5Tinsert(tid1, "c", HOFFSET(s1_t,c), H5T_NATIVE_FLOAT);
+ CHECK(ret, FAIL, "H5Tinsert");
+
+ /* Save datatype for later */
+ ret = H5Tcommit2(group, "Datatype1", tid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(ret, FAIL, "H5Tcommit2");
+
+ /* Close datatype */
+ ret = H5Tclose(tid1);
+ CHECK(ret, FAIL, "H5Tclose");
+
+ /* Close group */
+ ret = H5Gclose(group);
+ CHECK(ret, FAIL, "H5Gclose");
+
+ /* Create a dataset */
+ dataset = H5Dcreate2(fid1, "Dataset3", H5T_STD_REF, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, H5I_INVALID_HID, "H5Dcreate2");
+
+ t = 0;
+ for(i = 0; i < MAX_ITER_CREATE; i++) {
+ t1 = H5_get_time();
+ ret = H5Rcreate_object(fid1, "/Group1/Dataset1", &wbuf[0]);
+ CHECK(ret, FAIL, "H5Rcreate_object");
+ t2 = H5_get_time();
+ t += t2 - t1;
+ ret = H5Rdestroy(&wbuf[0]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ }
+ HDprintf("--- Object reference create time: %lfs\n", t / MAX_ITER_CREATE);
+
+ /* Create reference to dataset */
+ ret = H5Rcreate_object(fid1, "/Group1/Dataset1", &wbuf[0]);
+ CHECK(ret, FAIL, "H5Rcreate_object");
+ ret = H5Rget_obj_type3((const H5R_ref_t *)&wbuf[0], H5P_DEFAULT, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type3");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type3");
+
+ t = 0;
+ for(i = 0; i < MAX_ITER_WRITE; i++) {
+ t1 = H5_get_time();
+ /* Write selection to disk */
+ ret = H5Dwrite(dataset, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf);
+ CHECK(ret, FAIL, "H5Dwrite");
+ t2 = H5_get_time();
+ t += t2 - t1;
+ }
+ HDprintf("--- Object reference write time: %lfs\n", t / MAX_ITER_WRITE);
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Create a dataset */
+ dataset = H5Dcreate2(fid1, "Dataset4", H5T_STD_REF_OBJ, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, H5I_INVALID_HID, "H5Dcreate2");
+
+ t = 0;
+ for(i = 0; i < MAX_ITER_CREATE; i++) {
+ t1 = H5_get_time();
+ ret = H5Rcreate(&wbuf_deprec[0], fid1, "/Group1/Dataset1", H5R_OBJECT1, H5I_INVALID_HID);
+ CHECK(ret, FAIL, "H5Rcreate");
+ t2 = H5_get_time();
+ t += t2 - t1;
+ }
+ HDprintf("--- Deprecated object reference create time: %lfs\n", t / MAX_ITER_CREATE);
+
+ /* Create reference to dataset */
+ ret = H5Rcreate(&wbuf_deprec[0], fid1, "/Group1/Dataset1", H5R_OBJECT1, H5I_INVALID_HID);
+ CHECK(ret, FAIL, "H5Rcreate");
+
+ t = 0;
+ for(i = 0; i < MAX_ITER_WRITE; i++) {
+ t1 = H5_get_time();
+ /* Write selection to disk */
+ ret = H5Dwrite(dataset, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf_deprec);
+ CHECK(ret, FAIL, "H5Dwrite");
+ t2 = H5_get_time();
+ t += t2 - t1;
+ }
+ HDprintf("--- Deprecated object reference write time: %lfs\n", t / MAX_ITER_WRITE);
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Create a dataset */
+ dataset = H5Dcreate2(fid1, "Dataset5", H5T_STD_REF, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, H5I_INVALID_HID, "H5Dcreate2");
+
+ t = 0;
+ for(i = 0; i < MAX_ITER_CREATE; i++) {
+ t1 = H5_get_time();
+ /* Store first dataset region */
+ ret = H5Rcreate_region(fid1, "/Group1/Dataset1", sid1, &wbuf_reg[0]);
+ CHECK(ret, FAIL, "H5Rcreate_region");
+ t2 = H5_get_time();
+ t += t2 - t1;
+ ret = H5Rdestroy(&wbuf_reg[0]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ }
+ HDprintf("--- Region reference create time: %lfs\n", t / MAX_ITER_CREATE);
+
+ /* Store first dataset region */
+ ret = H5Rcreate_region(fid1, "/Group1/Dataset1", sid1, &wbuf_reg[0]);
+ CHECK(ret, FAIL, "H5Rcreate_region");
+
+ t = 0;
+ for(i = 0; i < MAX_ITER_WRITE; i++) {
+ t1 = H5_get_time();
+ /* Write selection to disk */
+ ret = H5Dwrite(dataset, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf_reg);
+ CHECK(ret, FAIL, "H5Dwrite");
+ t2 = H5_get_time();
+ t += t2 - t1;
+ }
+ HDprintf("--- Region reference write time: %lfs\n", t / MAX_ITER_WRITE);
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Create a dataset */
+ dataset = H5Dcreate2(fid1, "Dataset6", H5T_STD_REF_DSETREG, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, H5I_INVALID_HID, "H5Dcreate2");
+
+ t = 0;
+ for(i = 0; i < MAX_ITER_CREATE; i++) {
+ t1 = H5_get_time();
+ /* Store first dataset region */
+ ret = H5Rcreate(&wbuf_reg_deprec[0], fid1, "/Group1/Dataset1", H5R_DATASET_REGION1, sid1);
+ CHECK(ret, FAIL, "H5Rcreate");
+ t2 = H5_get_time();
+ t += t2 - t1;
+ }
+ HDprintf("--- Deprecated region reference create time: %lfs\n", t / MAX_ITER_CREATE);
+
+ t = 0;
+ for(i = 0; i < MAX_ITER_WRITE; i++) {
+ t1 = H5_get_time();
+ /* Write selection to disk */
+ ret = H5Dwrite(dataset, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf_reg_deprec);
+ CHECK(ret, FAIL, "H5Dwrite");
+ t2 = H5_get_time();
+ t += t2 - t1;
+ }
+ HDprintf("--- Deprecated region reference write time: %lfs\n", t / MAX_ITER_WRITE);
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close disk dataspace */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+
+ /* Re-open the file */
+ fid1 = H5Fopen(FILE_REF_OBJ, H5F_ACC_RDWR, H5P_DEFAULT);
+ CHECK(fid1, H5I_INVALID_HID, "H5Fopen");
+
+ /* Open the dataset */
+ dataset = H5Dopen2(fid1, "/Dataset3", H5P_DEFAULT);
+ CHECK(dataset, H5I_INVALID_HID, "H5Dopen2");
+
+ t = 0;
+ for(i = 0; i < MAX_ITER_READ; i++) {
+ t1 = H5_get_time();
+ /* Read selection from disk */
+ ret = H5Dread(dataset, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf);
+ CHECK(ret, FAIL, "H5Dread");
+ t2 = H5_get_time();
+ t += t2 - t1;
+ ret = H5Rdestroy(&rbuf[0]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ }
+ HDprintf("--- Object reference read time: %lfs\n", t / MAX_ITER_READ);
+
+ /* Read selection from disk */
+ ret = H5Dread(dataset, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf);
+ CHECK(ret, FAIL, "H5Dread");
+
+ /* Open dataset object */
+ dset2 = H5Ropen_object((const H5R_ref_t *)&rbuf[0], H5P_DEFAULT, dapl_id);
+ CHECK(dset2, H5I_INVALID_HID, "H5Ropen_object");
+
+ /* Check information in referenced dataset */
+ sid1 = H5Dget_space(dset2);
+ CHECK(sid1, H5I_INVALID_HID, "H5Dget_space");
+
+ ret = (int)H5Sget_simple_extent_npoints(sid1);
+ VERIFY(ret, dims1[0], "H5Sget_simple_extent_npoints");
+
+ /* Read from disk */
+ ret = H5Dread(dset2, H5T_NATIVE_UINT, H5S_ALL, H5S_ALL, H5P_DEFAULT, tbuf);
+ CHECK(ret, FAIL, "H5Dread");
+
+ for(tu32 = (unsigned *)tbuf, i = 0; i < (int)dims1[0]; i++, tu32++)
+ VERIFY(*tu32, (uint32_t)(i*3), "Data");
+
+ /* Close dereferenced Dataset */
+ ret = H5Dclose(dset2);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Open the dataset */
+ dataset = H5Dopen2(fid1, "/Dataset4", H5P_DEFAULT);
+ CHECK(dataset, H5I_INVALID_HID, "H5Dopen2");
+
+ t = 0;
+ for(i = 0; i < MAX_ITER_READ; i++) {
+ t1 = H5_get_time();
+ /* Read selection from disk */
+ ret = H5Dread(dataset, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf_deprec);
+ CHECK(ret, FAIL, "H5Dread");
+ t2 = H5_get_time();
+ t += t2 - t1;
+ }
+ HDprintf("--- Deprecated object reference read time: %lfs\n", t / MAX_ITER_READ);
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Open the dataset */
+ dataset = H5Dopen2(fid1, "/Dataset5", H5P_DEFAULT);
+ CHECK(dataset, H5I_INVALID_HID, "H5Dopen2");
+
+ t = 0;
+ for(i = 0; i < MAX_ITER_READ; i++) {
+ t1 = H5_get_time();
+ /* Read selection from disk */
+ ret = H5Dread(dataset, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf_reg);
+ CHECK(ret, FAIL, "H5Dread");
+ t2 = H5_get_time();
+ t += t2 - t1;
+ ret = H5Rdestroy(&rbuf_reg[0]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ }
+ HDprintf("--- Region reference read time: %lfs\n", t / MAX_ITER_READ);
+
+ /* Read selection from disk */
+ ret = H5Dread(dataset, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf_reg);
+ CHECK(ret, FAIL, "H5Dread");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Open the dataset */
+ dataset = H5Dopen2(fid1, "/Dataset6", H5P_DEFAULT);
+ CHECK(dataset, H5I_INVALID_HID, "H5Dopen2");
+
+ t = 0;
+ for(i = 0; i < MAX_ITER_READ; i++) {
+ t1 = H5_get_time();
+ /* Read selection from disk */
+ ret = H5Dread(dataset, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf_reg_deprec);
+ CHECK(ret, FAIL, "H5Dread");
+ t2 = H5_get_time();
+ t += t2 - t1;
+ }
+ HDprintf("--- Deprecated region reference read time: %lfs\n", t / MAX_ITER_READ);
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close dataset access property list */
+ ret = H5Pclose(dapl_id);
+ CHECK(ret, FAIL, "H5Pclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+
+ /* Destroy references */
+ for(j = 0; j < (int)dims1[0]; j++) {
+ ret = H5Rdestroy(&wbuf[j]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ ret = H5Rdestroy(&wbuf_reg[j]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ ret = H5Rdestroy(&rbuf[j]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ ret = H5Rdestroy(&rbuf_reg[j]);
+ CHECK(ret, FAIL, "H5Rdestroy");
+ }
+
+ /* Free memory buffers */
+ HDfree(wbuf);
+ HDfree(rbuf);
+ HDfree(wbuf_reg);
+ HDfree(rbuf_reg);
+ HDfree(wbuf_deprec);
+ HDfree(rbuf_deprec);
+ HDfree(wbuf_reg_deprec);
+ HDfree(rbuf_reg_deprec);
+ HDfree(tbuf);
+} /* test_reference_perf() */
/****************************************************************
**
@@ -1794,11 +2820,13 @@ test_reference(void)
} /* end high bound */
} /* end low bound */
- test_reference_obj_deleted(); /* Test H5R object reference code for deleted objects */
- test_reference_group(); /* Test operations on dereferenced groups */
-#ifndef H5_NO_DEPRECATED_SYMBOLS
- test_reference_compat(); /* Test operations with old API routines */
-#endif /* H5_NO_DEPRECATED_SYMBOLS */
+ test_reference_obj_deleted(); /* Test H5R object reference code for deleted objects */
+ test_reference_group(); /* Test operations on dereferenced groups */
+ test_reference_attr(); /* Test attribute references */
+ test_reference_external(); /* Test external references */
+ test_reference_compat_conv(); /* Test operations with old types */
+
+ test_reference_perf();
} /* test_reference() */
@@ -1820,8 +2848,14 @@ test_reference(void)
void
cleanup_reference(void)
{
- remove(FILE1);
- remove(FILE2);
- remove(FILE3);
+ HDremove(FILE_REF_PARAM);
+ HDremove(FILE_REF_OBJ);
+ HDremove(FILE_REF_REG);
+ HDremove(FILE_REF_REG_1D);
+ HDremove(FILE_REF_OBJ_DEL);
+ HDremove(FILE_REF_GRP);
+ HDremove(FILE_REF_ATTR);
+ HDremove(FILE_REF_EXT1);
+ HDremove(FILE_REF_EXT2);
+ HDremove(FILE_REF_COMPAT);
}
-
diff --git a/test/trefer_deprec.c b/test/trefer_deprec.c
new file mode 100644
index 0000000..949f41b
--- /dev/null
+++ b/test/trefer_deprec.c
@@ -0,0 +1,1827 @@
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group. *
+ * Copyright by the Board of Trustees of the University of Illinois. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the COPYING file, which can be found at the root of the source code *
+ * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. *
+ * If you do not have access to either file, you may request a copy from *
+ * help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+/***********************************************************
+*
+* Test program: trefer_deprec
+*
+* Test the Reference functionality
+*
+*************************************************************/
+
+#include "testhdf5.h"
+
+#define FILE1 "trefer1.h5"
+#define FILE2 "trefer2.h5"
+#define FILE3 "trefer3.h5"
+
+/* 1-D dataset with fixed dimensions */
+#define SPACE1_RANK 1
+#define SPACE1_DIM1 4
+
+/* 2-D dataset with fixed dimensions */
+#define SPACE2_RANK 2
+#define SPACE2_DIM1 10
+#define SPACE2_DIM2 10
+
+/* Larger 1-D dataset with fixed dimensions */
+#define SPACE3_RANK 1
+#define SPACE3_DIM1 100
+
+/* Element selection information */
+#define POINT1_NPOINTS 10
+
+/* Compound datatype */
+typedef struct s1_t {
+ unsigned int a;
+ unsigned int b;
+ float c;
+} s1_t;
+
+#define GROUPNAME "/group"
+#define GROUPNAME2 "group2"
+#define GROUPNAME3 "group3"
+#define DSETNAME "/dset"
+#define DSETNAME2 "dset2"
+#define NAME_SIZE 16
+
+
+/****************************************************************
+**
+** test_reference_params(): Test basic H5R (reference) parameters
+** for correct processing
+**
+****************************************************************/
+static void
+test_reference_params(void)
+{
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t dataset, /* Dataset ID */
+ dset2; /* Dereferenced dataset ID */
+ hid_t group; /* Group ID */
+ hid_t sid1; /* Dataspace ID */
+ hid_t tid1; /* Datatype ID */
+ hid_t dapl_id; /* Dataset access property list */
+ hsize_t dims1[] = {SPACE1_DIM1};
+ hobj_ref_t *wbuf, /* buffer to write to disk */
+ *rbuf, /* buffer read from disk */
+ *tbuf; /* temp. buffer read from disk */
+ unsigned *tu32; /* Temporary pointer to uint32 data */
+ int i; /* counting variables */
+ const char *write_comment = "Foo!"; /* Comments for group */
+ hid_t ret_id; /* Generic hid_t return value */
+ ssize_t name_size; /* Size of reference name */
+ herr_t ret; /* Generic return value */
+
+ /* Output message about test being performed */
+ MESSAGE(5, ("Testing Reference Parameters\n"));
+
+ /* Allocate write & read buffers */
+ wbuf = (hobj_ref_t *)HDmalloc(MAX(sizeof(unsigned), sizeof(hobj_ref_t)) * SPACE1_DIM1);
+ rbuf = (hobj_ref_t *)HDmalloc(MAX(sizeof(unsigned), sizeof(hobj_ref_t)) * SPACE1_DIM1);
+ tbuf = (hobj_ref_t *)HDmalloc(MAX(sizeof(unsigned), sizeof(hobj_ref_t)) * SPACE1_DIM1);
+
+ /* Create file */
+ fid1 = H5Fcreate(FILE1, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(fid1, FAIL, "H5Fcreate");
+
+ /* Create dataspace for datasets */
+ sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL);
+ CHECK(sid1, FAIL, "H5Screate_simple");
+
+ /* Create dataset access property list */
+ dapl_id = H5Pcreate(H5P_DATASET_ACCESS);
+ CHECK(dapl_id, FAIL, "H5Pcreate");
+
+ /* Create a group */
+ group = H5Gcreate2(fid1, "Group1", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(group, FAIL, "H5Gcreate2");
+
+ /* Set group's comment */
+ ret = H5Oset_comment(group, write_comment);
+ CHECK(ret, FAIL, "H5Oset_comment");
+
+ /* Create a dataset (inside Group1) */
+ dataset = H5Dcreate2(group, "Dataset1", H5T_NATIVE_UINT, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, FAIL, "H5Dcreate2");
+
+ for(tu32 = (unsigned *)wbuf, i = 0; i < SPACE1_DIM1; i++)
+ *tu32++ = (unsigned)i * 3;
+
+ /* Write selection to disk */
+ ret = H5Dwrite(dataset, H5T_NATIVE_UINT, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf);
+ CHECK(ret, FAIL, "H5Dwrite");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Create another dataset (inside Group1) */
+ dataset = H5Dcreate2(group, "Dataset2", H5T_NATIVE_UCHAR, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, FAIL, "H5Dcreate2");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Create a datatype to refer to */
+ tid1 = H5Tcreate(H5T_COMPOUND, sizeof(s1_t));
+ CHECK(tid1, FAIL, "H5Tcreate");
+
+ /* Insert fields */
+ ret = H5Tinsert(tid1, "a", HOFFSET(s1_t,a), H5T_NATIVE_INT);
+ CHECK(ret, FAIL, "H5Tinsert");
+
+ ret = H5Tinsert(tid1, "b", HOFFSET(s1_t,b), H5T_NATIVE_INT);
+ CHECK(ret, FAIL, "H5Tinsert");
+
+ ret = H5Tinsert(tid1, "c", HOFFSET(s1_t,c), H5T_NATIVE_FLOAT);
+ CHECK(ret, FAIL, "H5Tinsert");
+
+ /* Save datatype for later */
+ ret = H5Tcommit2(group, "Datatype1", tid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(ret, FAIL, "H5Tcommit2");
+
+ /* Close datatype */
+ ret = H5Tclose(tid1);
+ CHECK(ret, FAIL, "H5Tclose");
+
+ /* Close group */
+ ret = H5Gclose(group);
+ CHECK(ret, FAIL, "H5Gclose");
+
+ /* Create a dataset */
+ dataset = H5Dcreate2(fid1, "Dataset3", H5T_STD_REF_OBJ, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(ret, FAIL, "H5Dcreate2");
+
+ /* Test parameters to H5Rcreate */
+ ret = H5Rcreate(NULL, fid1, "/Group1/Dataset1", H5R_OBJECT, (hid_t)-1);
+ VERIFY(ret, FAIL, "H5Rcreate ref");
+ ret = H5Rcreate(&wbuf[0], (hid_t)-1, "/Group1/Dataset1", H5R_OBJECT, (hid_t)-1);
+ VERIFY(ret, FAIL, "H5Rcreate loc_id");
+ ret = H5Rcreate(&wbuf[0], fid1, NULL, H5R_OBJECT, (hid_t)-1);
+ VERIFY(ret, FAIL, "H5Rcreate name");
+ ret = H5Rcreate(&wbuf[0], fid1, "", H5R_OBJECT, (hid_t)-1);
+ VERIFY(ret, FAIL, "H5Rcreate null name");
+ ret = H5Rcreate(&wbuf[0], fid1, "/Group1/Dataset1", H5R_MAXTYPE, (hid_t)-1);
+ VERIFY(ret, FAIL, "H5Rcreate type");
+ ret = H5Rcreate(&wbuf[0], fid1, "/Group1/Dataset1", H5R_DATASET_REGION, (hid_t)-1);
+ VERIFY(ret, FAIL, "H5Rcreate region space");
+ ret = H5Rcreate(&wbuf[0], fid1, "/Group1/Dataset1", H5R_MAXTYPE, (hid_t)0);
+ VERIFY(ret, FAIL, "H5Rcreate space");
+
+ /* Test parameters to H5Rdereference */
+ dset2 = H5Rdereference2((hid_t)-1, H5P_DEFAULT, H5R_OBJECT, &rbuf[0]);
+ VERIFY(dset2, FAIL, "H5Rdereference2 loc_id");
+ dset2 = H5Rdereference2(dataset, (hid_t)-1, H5R_OBJECT, &rbuf[0]);
+ VERIFY(dset2, FAIL, "H5Rdereference2 oapl_id");
+ dset2 = H5Rdereference2(dataset, dapl_id, H5R_OBJECT, NULL);
+ VERIFY(dset2, FAIL, "H5Rdereference2 ref");
+ dset2 = H5Rdereference2(dataset, dapl_id, H5R_MAXTYPE, &rbuf[0]);
+ VERIFY(dset2, FAIL, "H5Rdereference2 type");
+
+ /* Test parameters to H5Rget_obj_type2 */
+ ret = H5Rget_obj_type2((hid_t)-1, H5R_OBJECT, &rbuf[0], NULL);
+ VERIFY(ret, FAIL, "H5Rget_obj_type2 loc_id");
+ ret = H5Rget_obj_type2(fid1, H5R_OBJECT, NULL, NULL);
+ VERIFY(ret, FAIL, "H5Rget_obj_type2 ref");
+ ret = H5Rget_obj_type2(fid1, H5R_MAXTYPE, &rbuf[0], NULL);
+ VERIFY(ret, FAIL, "H5Rget_obj_type2 type");
+
+ /* Test parameters to H5Rget_name */
+ name_size = H5Rget_name((hid_t)-1, H5R_DATASET_REGION, &rbuf[0], NULL, 0);
+ VERIFY(name_size, FAIL, "H5Rget_name loc_id");
+ name_size = H5Rget_name(fid1, H5R_DATASET_REGION, NULL, NULL, 0);
+ VERIFY(name_size, FAIL, "H5Rget_name ref");
+ name_size = H5Rget_name(fid1, H5R_MAXTYPE, &rbuf[0], NULL, 0);
+ VERIFY(name_size, FAIL, "H5Rget_name type");
+
+ /* Test parameters to H5Rget_region */
+ ret_id = H5Rget_region((hid_t)-1, H5R_OBJECT, &rbuf[0]);
+ VERIFY(ret_id, FAIL, "H5Rget_region loc_id");
+ ret_id = H5Rget_region(fid1, H5R_OBJECT, NULL);
+ VERIFY(ret_id, FAIL, "H5Rget_region ref");
+ ret_id = H5Rget_region(fid1, H5R_OBJECT, &rbuf[0]);
+ VERIFY(ret_id, FAIL, "H5Rget_region type");
+
+ /* Close disk dataspace */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close dataset access property list */
+ ret = H5Pclose(dapl_id);
+ CHECK(ret, FAIL, "H5Pclose");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+
+ /* Free memory buffers */
+ HDfree(wbuf);
+ HDfree(rbuf);
+ HDfree(tbuf);
+} /* test_reference_obj() */
+
+/****************************************************************
+**
+** test_reference_obj(): Test basic H5R (reference) object reference code.
+** Tests references to various kinds of objects
+**
+****************************************************************/
+static void
+test_reference_obj(void)
+{
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t dataset, /* Dataset ID */
+ dset2; /* Dereferenced dataset ID */
+ hid_t group; /* Group ID */
+ hid_t sid1; /* Dataspace ID */
+ hid_t tid1; /* Datatype ID */
+ hsize_t dims1[] = {SPACE1_DIM1};
+ hid_t dapl_id; /* Dataset access property list */
+ hobj_ref_t *wbuf, /* buffer to write to disk */
+ *rbuf, /* buffer read from disk */
+ *tbuf; /* temp. buffer read from disk */
+ hobj_ref_t nvrbuf[3]={0,101,1000000000}; /* buffer with non-valid refs */
+ unsigned *tu32; /* Temporary pointer to uint32 data */
+ int i, j; /* counting variables */
+ const char *write_comment="Foo!"; /* Comments for group */
+ char read_comment[10];
+ H5O_type_t obj_type; /* Object type */
+ ssize_t size; /* Comment length */
+ herr_t ret; /* Generic return value */
+
+ /* Output message about test being performed */
+ MESSAGE(5, ("Testing Object Reference Functions\n"));
+
+ /* Allocate write & read buffers */
+ wbuf = (hobj_ref_t *)HDmalloc(MAX(sizeof(unsigned), sizeof(hobj_ref_t)) * SPACE1_DIM1);
+ rbuf = (hobj_ref_t *)HDmalloc(MAX(sizeof(unsigned), sizeof(hobj_ref_t)) * SPACE1_DIM1);
+ tbuf = (hobj_ref_t *)HDmalloc(MAX(sizeof(unsigned), sizeof(hobj_ref_t)) * SPACE1_DIM1);
+
+ /* Create file */
+ fid1 = H5Fcreate(FILE1, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(fid1, FAIL, "H5Fcreate");
+
+ /* Create dataspace for datasets */
+ sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL);
+ CHECK(sid1, FAIL, "H5Screate_simple");
+
+ /* Create dataset access property list */
+ dapl_id = H5Pcreate(H5P_DATASET_ACCESS);
+ CHECK(dapl_id, FAIL, "H5Pcreate");
+
+ /* Create a group */
+ group = H5Gcreate2(fid1, "Group1", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(group, FAIL, "H5Gcreate2");
+
+ /* Set group's comment */
+ ret = H5Oset_comment(group, write_comment);
+ CHECK(ret, FAIL, "H5Oset_comment");
+
+ /* Create a dataset (inside Group1) */
+ dataset = H5Dcreate2(group, "Dataset1", H5T_NATIVE_UINT, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, FAIL, "H5Dcreate2");
+
+ for(tu32 = (unsigned *)wbuf, i = 0; i < SPACE1_DIM1; i++)
+ *tu32++ = (unsigned)i * 3;
+
+ /* Write selection to disk */
+ ret = H5Dwrite(dataset, H5T_NATIVE_UINT, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf);
+ CHECK(ret, FAIL, "H5Dwrite");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Create another dataset (inside Group1) */
+ dataset = H5Dcreate2(group, "Dataset2", H5T_NATIVE_UCHAR, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, FAIL, "H5Dcreate2");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Create a datatype to refer to */
+ tid1 = H5Tcreate(H5T_COMPOUND, sizeof(s1_t));
+ CHECK(tid1, FAIL, "H5Tcreate");
+
+ /* Insert fields */
+ ret = H5Tinsert(tid1, "a", HOFFSET(s1_t,a), H5T_NATIVE_INT);
+ CHECK(ret, FAIL, "H5Tinsert");
+
+ ret = H5Tinsert(tid1, "b", HOFFSET(s1_t,b), H5T_NATIVE_INT);
+ CHECK(ret, FAIL, "H5Tinsert");
+
+ ret = H5Tinsert(tid1, "c", HOFFSET(s1_t,c), H5T_NATIVE_FLOAT);
+ CHECK(ret, FAIL, "H5Tinsert");
+
+ /* Save datatype for later */
+ ret = H5Tcommit2(group, "Datatype1", tid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(ret, FAIL, "H5Tcommit2");
+
+ /* Close datatype */
+ ret = H5Tclose(tid1);
+ CHECK(ret, FAIL, "H5Tclose");
+
+ /* Close group */
+ ret = H5Gclose(group);
+ CHECK(ret, FAIL, "H5Gclose");
+
+ /* Create a dataset */
+ dataset = H5Dcreate2(fid1, "Dataset3", H5T_STD_REF_OBJ, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, FAIL, "H5Dcreate2");
+
+ /* Create reference to dataset */
+ ret = H5Rcreate(&wbuf[0], fid1, "/Group1/Dataset1", H5R_OBJECT, (hid_t)-1);
+ CHECK(ret, FAIL, "H5Rcreate");
+ ret = H5Rget_obj_type2(dataset, H5R_OBJECT, &wbuf[0], &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type2");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type2");
+
+ /* Create reference to dataset */
+ ret = H5Rcreate(&wbuf[1], fid1, "/Group1/Dataset2", H5R_OBJECT, (hid_t)-1);
+ CHECK(ret, FAIL, "H5Rcreate");
+ ret = H5Rget_obj_type2(dataset, H5R_OBJECT, &wbuf[1], &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type2");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type2");
+
+ /* Create reference to group */
+ ret = H5Rcreate(&wbuf[2], fid1, "/Group1", H5R_OBJECT, (hid_t)-1);
+ CHECK(ret, FAIL, "H5Rcreate");
+ ret = H5Rget_obj_type2(dataset, H5R_OBJECT, &wbuf[2], &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type2");
+ VERIFY(obj_type, H5O_TYPE_GROUP, "H5Rget_obj_type2");
+
+ /* Create reference to named datatype */
+ ret = H5Rcreate(&wbuf[3], fid1, "/Group1/Datatype1", H5R_OBJECT, (hid_t)-1);
+ CHECK(ret, FAIL, "H5Rcreate");
+ ret = H5Rget_obj_type2(dataset, H5R_OBJECT, &wbuf[3], &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type2");
+ VERIFY(obj_type, H5O_TYPE_NAMED_DATATYPE, "H5Rget_obj_type2");
+
+ /* Write selection to disk */
+ ret = H5Dwrite(dataset, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf);
+ CHECK(ret, FAIL, "H5Dwrite");
+
+ /* Close disk dataspace */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+
+ /* Re-open the file */
+ fid1 = H5Fopen(FILE1, H5F_ACC_RDWR, H5P_DEFAULT);
+ CHECK(fid1, FAIL, "H5Fopen");
+
+ /* Open the dataset */
+ dataset = H5Dopen2(fid1, "/Dataset3", H5P_DEFAULT);
+ CHECK(dataset, FAIL, "H5Dopen2");
+
+ /* Read selection from disk */
+ ret = H5Dread(dataset, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf);
+ CHECK(ret, FAIL, "H5Dread");
+
+ /* Open dataset object */
+ dset2 = H5Rdereference2(dataset, dapl_id, H5R_OBJECT, &rbuf[0]);
+ CHECK(dset2, FAIL, "H5Rdereference2");
+
+ /* Check information in referenced dataset */
+ sid1 = H5Dget_space(dset2);
+ CHECK(sid1, FAIL, "H5Dget_space");
+
+ ret = (int)H5Sget_simple_extent_npoints(sid1);
+ VERIFY(ret, 4, "H5Sget_simple_extent_npoints");
+
+ /* Read from disk */
+ ret = H5Dread(dset2, H5T_NATIVE_UINT, H5S_ALL, H5S_ALL, H5P_DEFAULT, tbuf);
+ CHECK(ret, FAIL, "H5Dread");
+
+ for(tu32 = (unsigned *)tbuf, i = 0; i < SPACE1_DIM1; i++, tu32++)
+ VERIFY(*tu32, (uint32_t)(i*3), "Data");
+
+ /* Close dereferenced Dataset */
+ ret = H5Dclose(dset2);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Open group object. GAPL isn't supported yet. But it's harmless to pass in */
+ group = H5Rdereference2(dataset, H5P_DEFAULT, H5R_OBJECT, &rbuf[2]);
+ CHECK(group, FAIL, "H5Rdereference2");
+
+ /* Get group's comment */
+ size = H5Oget_comment(group, read_comment, (size_t)10);
+ CHECK(size, FAIL, "H5Oget_comment");
+
+ /* Check for correct comment value */
+ if(HDstrcmp(write_comment, read_comment) != 0)
+ TestErrPrintf("Error! Incorrect group comment, wanted: %s, got: %s\n",write_comment,read_comment);
+
+ /* Close group */
+ ret = H5Gclose(group);
+ CHECK(ret, FAIL, "H5Gclose");
+
+ /* Open datatype object. TAPL isn't supported yet. But it's harmless to pass in */
+ tid1 = H5Rdereference2(dataset, H5P_DEFAULT, H5R_OBJECT, &rbuf[3]);
+ CHECK(tid1, FAIL, "H5Rdereference2");
+
+ /* Verify correct datatype */
+ {
+ H5T_class_t tclass;
+
+ tclass = H5Tget_class(tid1);
+ VERIFY(tclass, H5T_COMPOUND, "H5Tget_class");
+
+ ret= H5Tget_nmembers(tid1);
+ VERIFY(ret, 3, "H5Tget_nmembers");
+ }
+
+ /* Attempting to retrieve type of object using non-valid refs */
+ for(j = 0; j < 3; j++) {
+ H5E_BEGIN_TRY {
+ ret = H5Rget_obj_type2(dataset, H5R_OBJECT, &nvrbuf[j], &obj_type);
+ } H5E_END_TRY;
+ VERIFY(ret, FAIL, "H5Rget_obj_type2");
+ } /* end for */
+
+ /* Close datatype */
+ ret = H5Tclose(tid1);
+ CHECK(ret, FAIL, "H5Tclose");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close dataset access property list */
+ ret = H5Pclose(dapl_id);
+ CHECK(ret, FAIL, "H5Pclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+
+ /* Free memory buffers */
+ HDfree(wbuf);
+ HDfree(rbuf);
+ HDfree(tbuf);
+} /* test_reference_obj() */
+
+/****************************************************************
+**
+** test_reference_region(): Test basic H5R (reference) object reference code.
+** Tests references to various kinds of objects
+**
+** Note: The libver_low/libver_high parameters are added to create the file
+** with the low and high bounds setting in fapl.
+** Please see the RFC for "H5Sencode/H5Sdecode Format Change".
+**
+****************************************************************/
+static void
+test_reference_region(H5F_libver_t libver_low, H5F_libver_t libver_high)
+{
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t fapl = -1; /* File access property list */
+ hid_t dset1, /* Dataset ID */
+ dset2; /* Dereferenced dataset ID */
+ hid_t sid1, /* Dataspace ID #1 */
+ sid2; /* Dataspace ID #2 */
+ hid_t dapl_id; /* Dataset access property list */
+ hsize_t dims1[] = {SPACE1_DIM1},
+ dims2[] = {SPACE2_DIM1, SPACE2_DIM2};
+ hsize_t start[SPACE2_RANK]; /* Starting location of hyperslab */
+ hsize_t stride[SPACE2_RANK]; /* Stride of hyperslab */
+ hsize_t count[SPACE2_RANK]; /* Element count of hyperslab */
+ hsize_t block[SPACE2_RANK]; /* Block size of hyperslab */
+ hsize_t coord1[POINT1_NPOINTS][SPACE2_RANK]; /* Coordinates for point selection */
+ hsize_t *coords; /* Coordinate buffer */
+ hsize_t low[SPACE2_RANK]; /* Selection bounds */
+ hsize_t high[SPACE2_RANK]; /* Selection bounds */
+ hdset_reg_ref_t *wbuf, /* buffer to write to disk */
+ *rbuf; /* buffer read from disk */
+ hdset_reg_ref_t nvrbuf[3]={{0},{101},{255}}; /* buffer with non-valid refs */
+ uint8_t *dwbuf, /* Buffer for writing numeric data to disk */
+ *drbuf; /* Buffer for reading numeric data from disk */
+ uint8_t *tu8; /* Temporary pointer to uint8 data */
+ H5O_type_t obj_type; /* Type of object */
+ int i, j; /* counting variables */
+ hssize_t hssize_ret; /* hssize_t return value */
+ htri_t tri_ret; /* htri_t return value */
+ herr_t ret; /* Generic return value */
+ hdset_reg_ref_t undef_reg[1]; /* test for undefined reference */
+ hid_t dset_NA; /* Dataset id for undefined reference */
+ hid_t space_NA; /* Dataspace id for undefined reference */
+ hsize_t dims_NA[1] = {1}; /* Dims array for undefined reference */
+ hdset_reg_ref_t wdata_NA[1], /* Write buffer */
+ rdata_NA[1]; /* Read buffer */
+
+ /* Output message about test being performed */
+ MESSAGE(5, ("Testing Dataset Region Reference Functions\n"));
+
+ /* Allocate write & read buffers */
+ wbuf = (hdset_reg_ref_t *)HDcalloc(sizeof(hdset_reg_ref_t), (size_t)SPACE1_DIM1);
+ rbuf = (hdset_reg_ref_t *)HDmalloc(sizeof(hdset_reg_ref_t) * SPACE1_DIM1);
+ dwbuf = (uint8_t *)HDmalloc(sizeof(uint8_t) * SPACE2_DIM1 * SPACE2_DIM2);
+ drbuf = (uint8_t *)HDcalloc(sizeof(uint8_t), (size_t)(SPACE2_DIM1 * SPACE2_DIM2));
+
+ /* Create file access property list */
+ fapl = H5Pcreate(H5P_FILE_ACCESS);
+ CHECK(fapl, FAIL, "H5Pcreate");
+
+ /* Set the low/high version bounds in fapl */
+ ret = H5Pset_libver_bounds(fapl, libver_low, libver_high);
+ CHECK(ret, FAIL, "H5Pset_libver_bounds");
+
+ /* Create file with the fapl */
+ fid1 = H5Fcreate(FILE2, H5F_ACC_TRUNC, H5P_DEFAULT, fapl);
+ CHECK(fid1, FAIL, "H5Fcreate");
+
+ /* Create dataspace for datasets */
+ sid2 = H5Screate_simple(SPACE2_RANK, dims2, NULL);
+ CHECK(sid2, FAIL, "H5Screate_simple");
+
+ /* Create dataset access property list */
+ dapl_id = H5Pcreate(H5P_DATASET_ACCESS);
+ CHECK(dapl_id, FAIL, "H5Pcreate");
+
+ /* Create a dataset */
+ dset2 = H5Dcreate2(fid1, "Dataset2", H5T_STD_U8LE, sid2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dset2, FAIL, "H5Dcreate2");
+
+ for(tu8 = dwbuf, i = 0; i < (SPACE2_DIM1 * SPACE2_DIM2); i++)
+ *tu8++ = (uint8_t)(i * 3);
+
+ /* Write selection to disk */
+ ret = H5Dwrite(dset2, H5T_STD_U8LE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dwbuf);
+ CHECK(ret, FAIL, "H5Dwrite");
+
+ /* Close Dataset */
+ ret = H5Dclose(dset2);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Create dataspace for the reference dataset */
+ sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL);
+ CHECK(sid1, FAIL, "H5Screate_simple");
+
+ /* Create a dataset */
+ dset1 = H5Dcreate2(fid1, "Dataset1", H5T_STD_REF_DSETREG, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dset1, FAIL, "H5Dcreate2");
+
+ /* Create references */
+
+ /* Select 6x6 hyperslab for first reference */
+ start[0] = 2; start[1] = 2;
+ stride[0] = 1; stride[1] = 1;
+ count[0] = 1; count[1] = 1;
+ block[0] = 6; block[1] = 6;
+ ret = H5Sselect_hyperslab(sid2, H5S_SELECT_SET, start, stride, count, block);
+ CHECK(ret, FAIL, "H5Sselect_hyperslab");
+
+ ret = (int)H5Sget_select_npoints(sid2);
+ VERIFY(ret, 36, "H5Sget_select_npoints");
+
+ /* Store first dataset region */
+ ret = H5Rcreate(&wbuf[0], fid1, "/Dataset2", H5R_DATASET_REGION, sid2);
+ CHECK(ret, FAIL, "H5Rcreate");
+ ret = H5Rget_obj_type2(dset1, H5R_DATASET_REGION, &wbuf[0], &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type2");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type2");
+
+ /* Select sequence of ten points for second reference */
+ coord1[0][0] = 6; coord1[0][1] = 9;
+ coord1[1][0] = 2; coord1[1][1] = 2;
+ coord1[2][0] = 8; coord1[2][1] = 4;
+ coord1[3][0] = 1; coord1[3][1] = 6;
+ coord1[4][0] = 2; coord1[4][1] = 8;
+ coord1[5][0] = 3; coord1[5][1] = 2;
+ coord1[6][0] = 0; coord1[6][1] = 4;
+ coord1[7][0] = 9; coord1[7][1] = 0;
+ coord1[8][0] = 7; coord1[8][1] = 1;
+ coord1[9][0] = 3; coord1[9][1] = 3;
+ ret = H5Sselect_elements(sid2, H5S_SELECT_SET, (size_t)POINT1_NPOINTS, (const hsize_t *)coord1);
+ CHECK(ret, FAIL, "H5Sselect_elements");
+
+ ret = (int)H5Sget_select_npoints(sid2);
+ VERIFY(ret, 10, "H5Sget_select_npoints");
+
+ /* Store second dataset region */
+ ret = H5Rcreate(&wbuf[1], fid1, "/Dataset2", H5R_DATASET_REGION, sid2);
+ CHECK(ret, FAIL, "H5Rcreate");
+
+ /* Select unlimited hyperslab for third reference */
+ start[0] = 1; start[1] = 8;
+ stride[0] = 4; stride[1] = 1;
+ count[0] = H5S_UNLIMITED; count[1] = 1;
+ block[0] = 2; block[1] = 2;
+ ret = H5Sselect_hyperslab(sid2, H5S_SELECT_SET, start, stride, count, block);
+ CHECK(ret, FAIL, "H5Sselect_hyperslab");
+
+ hssize_ret = H5Sget_select_npoints(sid2);
+ VERIFY(hssize_ret, (hssize_t)H5S_UNLIMITED, "H5Sget_select_npoints");
+
+ /* Store third dataset region */
+ H5E_BEGIN_TRY {
+ ret = H5Rcreate(&wbuf[2], fid1, "/Dataset2", H5R_DATASET_REGION, sid2);
+ } H5E_END_TRY;
+
+ if(libver_high < H5F_LIBVER_V110)
+ VERIFY(ret, FAIL, "H5Rcreate");
+ else
+ CHECK(ret, FAIL, "H5Rcreate");
+
+ ret = H5Rget_obj_type2(dset1, H5R_DATASET_REGION, &wbuf[0], &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type2");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type2");
+
+ /* Write selection to disk */
+ ret = H5Dwrite(dset1, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf);
+ CHECK(ret, FAIL, "H5Dwrite");
+
+ /*
+ * Store a dataset region reference which will not get written to disk
+ */
+
+ /* Create reference to an element in dset1 */
+ ret = H5Sselect_elements(sid2, H5S_SELECT_SET, (size_t)1, (const hsize_t *)coord1);
+ CHECK(ret, FAIL, "H5Sselect_elements");
+ ret = H5Rcreate(&wdata_NA[0], fid1, "/Dataset1", H5R_DATASET_REGION, sid2);
+ CHECK(ret, FAIL, "H5Rcreate");
+
+ /* Create the dataspace of the region references */
+ space_NA = H5Screate_simple(1, dims_NA, NULL);
+ CHECK(space_NA, FAIL, "H5Screate_simple");
+
+ /* Create the dataset and write the region references to it */
+ dset_NA = H5Dcreate2(fid1, "DS_NA", H5T_STD_REF_DSETREG, space_NA, H5P_DEFAULT,
+ H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dset_NA, FAIL, "H5Dcreate");
+
+ /* Close and release resources for undefined region reference tests */
+ ret = H5Dclose(dset_NA);
+ CHECK(ret, FAIL, "H5Dclose");
+ ret = H5Sclose(space_NA);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close disk dataspace */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close Dataset */
+ ret = H5Dclose(dset1);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close uint8 dataset dataspace */
+ ret = H5Sclose(sid2);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+
+ /* Re-open the file */
+ fid1 = H5Fopen(FILE2, H5F_ACC_RDWR, fapl);
+ CHECK(fid1, FAIL, "H5Fopen");
+
+ /*
+ * Start the test of an undefined reference
+ */
+
+ /* Open the dataset of the undefined references */
+ dset_NA = H5Dopen2(fid1, "DS_NA", H5P_DEFAULT);
+ CHECK(dset_NA, FAIL, "H5Dopen2");
+
+ /* Read the data */
+ ret = H5Dread(dset_NA, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, rdata_NA);
+ CHECK(ret, FAIL, "H5Dread");
+
+ /*
+ * Dereference an undefined reference (should fail)
+ */
+ H5E_BEGIN_TRY {
+ dset2 = H5Rdereference2(dset_NA, H5P_DEFAULT, H5R_DATASET_REGION, &rdata_NA[0]);
+ } H5E_END_TRY;
+ VERIFY(dset2, FAIL, "H5Rdereference2");
+
+ /* Close and release resources. */
+ ret = H5Dclose(dset_NA);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* This close should fail since H5Rdereference2 never created
+ * the id of the referenced object. */
+ H5E_BEGIN_TRY {
+ ret = H5Dclose(dset2);
+ } H5E_END_TRY;
+ VERIFY(ret, FAIL, "H5Dclose");
+
+ /*
+ * End the test of an undefined reference
+ */
+
+ /* Open the dataset */
+ dset1 = H5Dopen2(fid1, "/Dataset1", H5P_DEFAULT);
+ CHECK(dset1, FAIL, "H5Dopen2");
+
+ /* Read selection from disk */
+ ret = H5Dread(dset1, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf);
+ CHECK(ret, FAIL, "H5Dread");
+
+ /* Try to read an unaddressed dataset */
+ dset2 = H5Rdereference2(dset1, dapl_id, H5R_DATASET_REGION, undef_reg);
+ VERIFY(dset2, FAIL, "H5Rdereference2 haddr_undef");
+
+ /* Try to open objects */
+ dset2 = H5Rdereference2(dset1, dapl_id, H5R_DATASET_REGION, &rbuf[0]);
+ CHECK(dset2, FAIL, "H5Rdereference2");
+
+ /* Check what H5Rget_obj_type2 function returns */
+ ret = H5Rget_obj_type2(dset1, H5R_DATASET_REGION, &rbuf[0], &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type2");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type2");
+
+ /* Check information in referenced dataset */
+ sid1 = H5Dget_space(dset2);
+ CHECK(sid1, FAIL, "H5Dget_space");
+
+ ret = (int)H5Sget_simple_extent_npoints(sid1);
+ VERIFY(ret, 100, "H5Sget_simple_extent_npoints");
+
+ /* Read from disk */
+ ret = H5Dread(dset2, H5T_STD_U8LE, H5S_ALL, H5S_ALL, H5P_DEFAULT, drbuf);
+ CHECK(ret, FAIL, "H5Dread");
+
+ for(tu8 = (uint8_t *)drbuf, i = 0; i < (SPACE2_DIM1 * SPACE2_DIM2); i++, tu8++)
+ VERIFY(*tu8, (uint8_t)(i * 3), "Data");
+
+ /* Get the hyperslab selection */
+ sid2 = H5Rget_region(dset1, H5R_DATASET_REGION, &rbuf[0]);
+ CHECK(sid2, FAIL, "H5Rget_region");
+
+ /* Verify correct hyperslab selected */
+ ret = (int)H5Sget_select_npoints(sid2);
+ VERIFY(ret, 36, "H5Sget_select_npoints");
+ ret = (int)H5Sget_select_hyper_nblocks(sid2);
+ VERIFY(ret, 1, "H5Sget_select_hyper_nblocks");
+ coords = (hsize_t *)HDmalloc((size_t)ret * SPACE2_RANK * sizeof(hsize_t) * 2); /* allocate space for the hyperslab blocks */
+ ret = H5Sget_select_hyper_blocklist(sid2, (hsize_t)0, (hsize_t)ret, coords);
+ CHECK(ret, FAIL, "H5Sget_select_hyper_blocklist");
+ VERIFY(coords[0], 2, "Hyperslab Coordinates");
+ VERIFY(coords[1], 2, "Hyperslab Coordinates");
+ VERIFY(coords[2], 7, "Hyperslab Coordinates");
+ VERIFY(coords[3], 7, "Hyperslab Coordinates");
+ HDfree(coords);
+ ret = H5Sget_select_bounds(sid2, low, high);
+ CHECK(ret, FAIL, "H5Sget_select_bounds");
+ VERIFY(low[0], 2, "Selection Bounds");
+ VERIFY(low[1], 2, "Selection Bounds");
+ VERIFY(high[0], 7, "Selection Bounds");
+ VERIFY(high[1], 7, "Selection Bounds");
+
+ /* Close region space */
+ ret = H5Sclose(sid2);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Get the element selection */
+ sid2 = H5Rget_region(dset1, H5R_DATASET_REGION, &rbuf[1]);
+ CHECK(sid2, FAIL, "H5Rget_region");
+
+ /* Verify correct elements selected */
+ ret = (int)H5Sget_select_npoints(sid2);
+ VERIFY(ret, 10, "H5Sget_select_npoints");
+ ret = (int)H5Sget_select_elem_npoints(sid2);
+ VERIFY(ret, 10, "H5Sget_select_elem_npoints");
+ coords = (hsize_t *)HDmalloc((size_t)ret * SPACE2_RANK * sizeof(hsize_t)); /* allocate space for the element points */
+ ret = H5Sget_select_elem_pointlist(sid2, (hsize_t)0, (hsize_t)ret, coords);
+ CHECK(ret, FAIL, "H5Sget_select_elem_pointlist");
+ VERIFY(coords[0], coord1[0][0], "Element Coordinates");
+ VERIFY(coords[1], coord1[0][1], "Element Coordinates");
+ VERIFY(coords[2], coord1[1][0], "Element Coordinates");
+ VERIFY(coords[3], coord1[1][1], "Element Coordinates");
+ VERIFY(coords[4], coord1[2][0], "Element Coordinates");
+ VERIFY(coords[5], coord1[2][1], "Element Coordinates");
+ VERIFY(coords[6], coord1[3][0], "Element Coordinates");
+ VERIFY(coords[7], coord1[3][1], "Element Coordinates");
+ VERIFY(coords[8], coord1[4][0], "Element Coordinates");
+ VERIFY(coords[9], coord1[4][1], "Element Coordinates");
+ VERIFY(coords[10], coord1[5][0], "Element Coordinates");
+ VERIFY(coords[11], coord1[5][1], "Element Coordinates");
+ VERIFY(coords[12], coord1[6][0], "Element Coordinates");
+ VERIFY(coords[13], coord1[6][1], "Element Coordinates");
+ VERIFY(coords[14], coord1[7][0], "Element Coordinates");
+ VERIFY(coords[15], coord1[7][1], "Element Coordinates");
+ VERIFY(coords[16], coord1[8][0], "Element Coordinates");
+ VERIFY(coords[17], coord1[8][1], "Element Coordinates");
+ VERIFY(coords[18], coord1[9][0], "Element Coordinates");
+ VERIFY(coords[19], coord1[9][1], "Element Coordinates");
+ HDfree(coords);
+ ret = H5Sget_select_bounds(sid2, low, high);
+ CHECK(ret, FAIL, "H5Sget_select_bounds");
+ VERIFY(low[0], 0, "Selection Bounds");
+ VERIFY(low[1], 0, "Selection Bounds");
+ VERIFY(high[0], 9, "Selection Bounds");
+ VERIFY(high[1], 9, "Selection Bounds");
+
+ /* Close region space */
+ ret = H5Sclose(sid2);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ if(libver_high >= H5F_LIBVER_V110) {
+ /* Get the unlimited selection */
+ sid2 = H5Rget_region(dset1, H5R_DATASET_REGION, &rbuf[2]);
+ CHECK(sid2, FAIL, "H5Rget_region");
+
+ /* Verify correct hyperslab selected */
+ hssize_ret = H5Sget_select_npoints(sid2);
+ VERIFY(hssize_ret, (hssize_t)H5S_UNLIMITED, "H5Sget_select_npoints");
+ tri_ret = H5Sis_regular_hyperslab(sid2);
+ CHECK(tri_ret, FAIL, "H5Sis_regular_hyperslab");
+ VERIFY(tri_ret, TRUE, "H5Sis_regular_hyperslab Result");
+ ret = H5Sget_regular_hyperslab(sid2, start, stride, count, block);
+ CHECK(ret, FAIL, "H5Sget_regular_hyperslab");
+ VERIFY(start[0], (hsize_t)1, "Hyperslab Coordinates");
+ VERIFY(start[1], (hsize_t)8, "Hyperslab Coordinates");
+ VERIFY(stride[0], (hsize_t)4, "Hyperslab Coordinates");
+ VERIFY(stride[1], (hsize_t)1, "Hyperslab Coordinates");
+ VERIFY(count[0], H5S_UNLIMITED, "Hyperslab Coordinates");
+ VERIFY(count[1], (hsize_t)1, "Hyperslab Coordinates");
+ VERIFY(block[0], (hsize_t)2, "Hyperslab Coordinates");
+ VERIFY(block[1], (hsize_t)2, "Hyperslab Coordinates");
+
+ /* Close region space */
+ ret = H5Sclose(sid2);
+ CHECK(ret, FAIL, "H5Sclose");
+ }
+
+ /* Close first space */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close dereferenced Dataset */
+ ret = H5Dclose(dset2);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Attempting to retrieve type of object using non-valid refs */
+ for(j = 0; j < 3; j++) {
+ H5E_BEGIN_TRY {
+ ret = H5Rget_obj_type2(dset1, H5R_DATASET_REGION, &nvrbuf[j], &obj_type);
+ } H5E_END_TRY;
+ VERIFY(ret, FAIL, "H5Rget_obj_type2");
+ } /* end for */
+
+ /* Close Dataset */
+ ret = H5Dclose(dset1);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close dataset access property list */
+ ret = H5Pclose(dapl_id);
+ CHECK(ret, FAIL, "H5Pclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+
+ /* Free memory buffers */
+ HDfree(wbuf);
+ HDfree(rbuf);
+ HDfree(dwbuf);
+ HDfree(drbuf);
+} /* test_reference_region() */
+
+/****************************************************************
+**
+** test_reference_region_1D(): Test H5R (reference) object reference code.
+** Tests 1-D references to various kinds of objects
+**
+** Note: The libver_low/libver_high parameters are added to create the file
+** with the low and high bounds setting in fapl.
+** Please see the RFC for "H5Sencode/H5Sdecode Format Change".
+**
+****************************************************************/
+static void
+test_reference_region_1D(H5F_libver_t libver_low, H5F_libver_t libver_high)
+{
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t fapl = -1; /* File access property list */
+ hid_t dset1, /* Dataset ID */
+ dset3; /* Dereferenced dataset ID */
+ hid_t sid1, /* Dataspace ID #1 */
+ sid3; /* Dataspace ID #3 */
+ hid_t dapl_id; /* Dataset access property list */
+ hsize_t dims1[] = {SPACE1_DIM1},
+ dims3[] = {SPACE3_DIM1};
+ hsize_t start[SPACE3_RANK]; /* Starting location of hyperslab */
+ hsize_t stride[SPACE3_RANK]; /* Stride of hyperslab */
+ hsize_t count[SPACE3_RANK]; /* Element count of hyperslab */
+ hsize_t block[SPACE3_RANK]; /* Block size of hyperslab */
+ hsize_t coord1[POINT1_NPOINTS][SPACE3_RANK]; /* Coordinates for point selection */
+ hsize_t *coords; /* Coordinate buffer */
+ hsize_t low[SPACE3_RANK]; /* Selection bounds */
+ hsize_t high[SPACE3_RANK]; /* Selection bounds */
+ hdset_reg_ref_t *wbuf, /* buffer to write to disk */
+ *rbuf; /* buffer read from disk */
+ uint8_t *dwbuf, /* Buffer for writing numeric data to disk */
+ *drbuf; /* Buffer for reading numeric data from disk */
+ uint8_t *tu8; /* Temporary pointer to uint8 data */
+ H5O_type_t obj_type; /* Object type */
+ int i; /* counting variables */
+ herr_t ret; /* Generic return value */
+
+ /* Output message about test being performed */
+ MESSAGE(5, ("Testing 1-D Dataset Region Reference Functions\n"));
+
+ /* Allocate write & read buffers */
+ wbuf = (hdset_reg_ref_t *)HDcalloc(sizeof(hdset_reg_ref_t), (size_t)SPACE1_DIM1);
+ rbuf = (hdset_reg_ref_t *)HDmalloc(sizeof(hdset_reg_ref_t) * SPACE1_DIM1);
+ dwbuf = (uint8_t *)HDmalloc(sizeof(uint8_t) * SPACE3_DIM1);
+ drbuf = (uint8_t *)HDcalloc(sizeof(uint8_t), (size_t)SPACE3_DIM1);
+
+ /* Create the file access property list */
+ fapl = H5Pcreate(H5P_FILE_ACCESS);
+ CHECK(fapl, FAIL, "H5Pcreate");
+
+ /* Set the low/high version bounds in fapl */
+ ret = H5Pset_libver_bounds(fapl, libver_low, libver_high);
+ CHECK(ret, FAIL, "H5Pset_libver_bounds");
+
+ /* Create file with the fapl */
+ fid1 = H5Fcreate(FILE2, H5F_ACC_TRUNC, H5P_DEFAULT, fapl);
+ CHECK(fid1, FAIL, "H5Fcreate");
+
+ /* Create dataspace for datasets */
+ sid3 = H5Screate_simple(SPACE3_RANK, dims3, NULL);
+ CHECK(sid3, FAIL, "H5Screate_simple");
+
+ /* Create dataset access property list */
+ dapl_id = H5Pcreate(H5P_DATASET_ACCESS);
+ CHECK(dapl_id, FAIL, "H5Pcreate");
+
+ /* Create a dataset */
+ dset3 = H5Dcreate2(fid1, "Dataset2", H5T_STD_U8LE, sid3, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dset3, FAIL, "H5Dcreate2");
+
+ for(tu8 = dwbuf, i = 0; i < SPACE3_DIM1; i++)
+ *tu8++ = (uint8_t)(i * 3);
+
+ /* Write selection to disk */
+ ret = H5Dwrite(dset3, H5T_STD_U8LE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dwbuf);
+ CHECK(ret, FAIL, "H5Dwrite");
+
+ /* Close Dataset */
+ ret = H5Dclose(dset3);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Create dataspace for the reference dataset */
+ sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL);
+ CHECK(sid1, FAIL, "H5Screate_simple");
+
+ /* Create a dataset */
+ dset1 = H5Dcreate2(fid1, "Dataset1", H5T_STD_REF_DSETREG, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(ret, FAIL, "H5Dcreate2");
+
+ /* Create references */
+
+ /* Select 15 2x1 hyperslabs for first reference */
+ start[0] = 2;
+ stride[0] = 5;
+ count[0] = 15;
+ block[0] = 2;
+ ret = H5Sselect_hyperslab(sid3, H5S_SELECT_SET, start, stride, count, block);
+ CHECK(ret, FAIL, "H5Sselect_hyperslab");
+
+ ret = (int)H5Sget_select_npoints(sid3);
+ VERIFY(ret, 30, "H5Sget_select_npoints");
+
+ /* Store first dataset region */
+ ret = H5Rcreate(&wbuf[0], fid1, "/Dataset2", H5R_DATASET_REGION, sid3);
+ CHECK(ret, FAIL, "H5Rcreate");
+ ret = H5Rget_obj_type2(dset1, H5R_DATASET_REGION, &wbuf[0], &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type2");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type2");
+
+ /* Select sequence of ten points for second reference */
+ coord1[0][0] = 16;
+ coord1[1][0] = 22;
+ coord1[2][0] = 38;
+ coord1[3][0] = 41;
+ coord1[4][0] = 52;
+ coord1[5][0] = 63;
+ coord1[6][0] = 70;
+ coord1[7][0] = 89;
+ coord1[8][0] = 97;
+ coord1[9][0] = 03;
+ ret = H5Sselect_elements(sid3, H5S_SELECT_SET, (size_t)POINT1_NPOINTS, (const hsize_t *)coord1);
+ CHECK(ret, FAIL, "H5Sselect_elements");
+
+ ret = (int)H5Sget_select_npoints(sid3);
+ VERIFY(ret, 10, "H5Sget_select_npoints");
+
+ /* Store second dataset region */
+ ret = H5Rcreate(&wbuf[1], fid1, "/Dataset2", H5R_DATASET_REGION, sid3);
+ CHECK(ret, FAIL, "H5Rcreate");
+
+ /* Write selection to disk */
+ ret = H5Dwrite(dset1, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf);
+ CHECK(ret, FAIL, "H5Dwrite");
+
+ /* Close disk dataspace */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close Dataset */
+ ret = H5Dclose(dset1);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close uint8 dataset dataspace */
+ ret = H5Sclose(sid3);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+
+ /* Re-open the file */
+ fid1 = H5Fopen(FILE2, H5F_ACC_RDWR, fapl);
+ CHECK(fid1, FAIL, "H5Fopen");
+
+ /* Open the dataset */
+ dset1 = H5Dopen2(fid1, "/Dataset1", H5P_DEFAULT);
+ CHECK(dset1, FAIL, "H5Dopen2");
+
+ /* Read selection from disk */
+ ret = H5Dread(dset1, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf);
+ CHECK(ret, FAIL, "H5Dread");
+
+ /* Try to open objects */
+ dset3 = H5Rdereference2(dset1, dapl_id, H5R_DATASET_REGION, &rbuf[0]);
+ CHECK(dset3, FAIL, "H5Rdereference2");
+
+ /* Check what H5Rget_obj_type2 function returns */
+ ret = H5Rget_obj_type2(dset1, H5R_DATASET_REGION, &rbuf[0], &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type2");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type2");
+
+ /* Check information in referenced dataset */
+ sid1 = H5Dget_space(dset3);
+ CHECK(sid1, FAIL, "H5Dget_space");
+
+ ret = (int)H5Sget_simple_extent_npoints(sid1);
+ VERIFY(ret, 100, "H5Sget_simple_extent_npoints");
+
+ /* Read from disk */
+ ret = H5Dread(dset3, H5T_STD_U8LE, H5S_ALL, H5S_ALL, H5P_DEFAULT, drbuf);
+ CHECK(ret, FAIL, "H5Dread");
+
+ for(tu8 = (uint8_t *)drbuf, i = 0; i < SPACE3_DIM1; i++, tu8++)
+ VERIFY(*tu8, (uint8_t)(i * 3), "Data");
+
+ /* Get the hyperslab selection */
+ sid3 = H5Rget_region(dset1, H5R_DATASET_REGION, &rbuf[0]);
+ CHECK(sid3, FAIL, "H5Rget_region");
+
+ /* Verify correct hyperslab selected */
+ ret = (int)H5Sget_select_npoints(sid3);
+ VERIFY(ret, 30, "H5Sget_select_npoints");
+ ret = (int)H5Sget_select_hyper_nblocks(sid3);
+ VERIFY(ret, 15, "H5Sget_select_hyper_nblocks");
+ coords = (hsize_t *)HDmalloc((size_t)ret * SPACE3_RANK * sizeof(hsize_t) * 2); /* allocate space for the hyperslab blocks */
+ ret = H5Sget_select_hyper_blocklist(sid3, (hsize_t)0, (hsize_t)ret, coords);
+ CHECK(ret, FAIL, "H5Sget_select_hyper_blocklist");
+ VERIFY(coords[0], 2, "Hyperslab Coordinates");
+ VERIFY(coords[1], 3, "Hyperslab Coordinates");
+ VERIFY(coords[2], 7, "Hyperslab Coordinates");
+ VERIFY(coords[3], 8, "Hyperslab Coordinates");
+ VERIFY(coords[4], 12, "Hyperslab Coordinates");
+ VERIFY(coords[5], 13, "Hyperslab Coordinates");
+ VERIFY(coords[6], 17, "Hyperslab Coordinates");
+ VERIFY(coords[7], 18, "Hyperslab Coordinates");
+ VERIFY(coords[8], 22, "Hyperslab Coordinates");
+ VERIFY(coords[9], 23, "Hyperslab Coordinates");
+ VERIFY(coords[10], 27, "Hyperslab Coordinates");
+ VERIFY(coords[11], 28, "Hyperslab Coordinates");
+ VERIFY(coords[12], 32, "Hyperslab Coordinates");
+ VERIFY(coords[13], 33, "Hyperslab Coordinates");
+ VERIFY(coords[14], 37, "Hyperslab Coordinates");
+ VERIFY(coords[15], 38, "Hyperslab Coordinates");
+ VERIFY(coords[16], 42, "Hyperslab Coordinates");
+ VERIFY(coords[17], 43, "Hyperslab Coordinates");
+ VERIFY(coords[18], 47, "Hyperslab Coordinates");
+ VERIFY(coords[19], 48, "Hyperslab Coordinates");
+ VERIFY(coords[20], 52, "Hyperslab Coordinates");
+ VERIFY(coords[21], 53, "Hyperslab Coordinates");
+ VERIFY(coords[22], 57, "Hyperslab Coordinates");
+ VERIFY(coords[23], 58, "Hyperslab Coordinates");
+ VERIFY(coords[24], 62, "Hyperslab Coordinates");
+ VERIFY(coords[25], 63, "Hyperslab Coordinates");
+ VERIFY(coords[26], 67, "Hyperslab Coordinates");
+ VERIFY(coords[27], 68, "Hyperslab Coordinates");
+ VERIFY(coords[28], 72, "Hyperslab Coordinates");
+ VERIFY(coords[29], 73, "Hyperslab Coordinates");
+ HDfree(coords);
+ ret = H5Sget_select_bounds(sid3, low, high);
+ CHECK(ret, FAIL, "H5Sget_select_bounds");
+ VERIFY(low[0], 2, "Selection Bounds");
+ VERIFY(high[0], 73, "Selection Bounds");
+
+ /* Close region space */
+ ret = H5Sclose(sid3);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Get the element selection */
+ sid3 = H5Rget_region(dset1, H5R_DATASET_REGION, &rbuf[1]);
+ CHECK(sid3, FAIL, "H5Rget_region");
+
+ /* Verify correct elements selected */
+ ret = (int)H5Sget_select_npoints(sid3);
+ VERIFY(ret, 10, "H5Sget_select_npoints");
+ ret = (int)H5Sget_select_elem_npoints(sid3);
+ VERIFY(ret, 10, "H5Sget_select_elem_npoints");
+ coords = (hsize_t *)HDmalloc((size_t)ret * SPACE3_RANK * sizeof(hsize_t)); /* allocate space for the element points */
+ ret = H5Sget_select_elem_pointlist(sid3, (hsize_t)0, (hsize_t)ret, coords);
+ CHECK(ret, FAIL, "H5Sget_select_elem_pointlist");
+ VERIFY(coords[0], coord1[0][0], "Element Coordinates");
+ VERIFY(coords[1], coord1[1][0], "Element Coordinates");
+ VERIFY(coords[2], coord1[2][0], "Element Coordinates");
+ VERIFY(coords[3], coord1[3][0], "Element Coordinates");
+ VERIFY(coords[4], coord1[4][0], "Element Coordinates");
+ VERIFY(coords[5], coord1[5][0], "Element Coordinates");
+ VERIFY(coords[6], coord1[6][0], "Element Coordinates");
+ VERIFY(coords[7], coord1[7][0], "Element Coordinates");
+ VERIFY(coords[8], coord1[8][0], "Element Coordinates");
+ VERIFY(coords[9], coord1[9][0], "Element Coordinates");
+ HDfree(coords);
+ ret = H5Sget_select_bounds(sid3, low, high);
+ CHECK(ret, FAIL, "H5Sget_select_bounds");
+ VERIFY(low[0], 3, "Selection Bounds");
+ VERIFY(high[0], 97, "Selection Bounds");
+
+ /* Close region space */
+ ret = H5Sclose(sid3);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close first space */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close dereferenced Dataset */
+ ret = H5Dclose(dset3);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close Dataset */
+ ret = H5Dclose(dset1);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close dataset access property list */
+ ret = H5Pclose(dapl_id);
+ CHECK(ret, FAIL, "H5Pclose");
+
+ /* Close file access property list */
+ ret = H5Pclose(fapl);
+ CHECK(ret, FAIL, "H5Pclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+
+ /* Free memory buffers */
+ HDfree(wbuf);
+ HDfree(rbuf);
+ HDfree(dwbuf);
+ HDfree(drbuf);
+} /* test_reference_region_1D() */
+
+/****************************************************************
+**
+** test_reference_obj_deleted(): Test H5R (reference) object reference code.
+** Tests for correct failures for deleted and non-existent objects
+**
+****************************************************************/
+static void
+test_reference_obj_deleted(void)
+{
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t dataset, /* Dataset ID */
+ dset2; /* Dereferenced dataset ID */
+ hid_t sid1; /* Dataspace ID */
+ hobj_ref_t oref; /* Object Reference to test */
+ H5O_type_t obj_type; /* Object type */
+ haddr_t addr = HADDR_UNDEF; /* test for undefined reference */
+ herr_t ret; /* Generic return value */
+
+ /* Create file */
+ fid1 = H5Fcreate(FILE3, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(fid1, FAIL, "H5Fcreate");
+
+ /* Create scalar dataspace for datasets */
+ sid1 = H5Screate_simple(0, NULL, NULL);
+ CHECK(sid1, FAIL, "H5Screate_simple");
+
+ /* Create a dataset to reference (deleted later) */
+ dataset = H5Dcreate2(fid1, "Dataset1", H5T_NATIVE_INT, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, FAIL, "H5Dcreate2");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Create a dataset */
+ dataset = H5Dcreate2(fid1, "Dataset2", H5T_STD_REF_OBJ, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, FAIL, "H5Dcreate2");
+
+ /* Create reference to dataset */
+ ret = H5Rcreate(&oref, fid1, "/Dataset1", H5R_OBJECT, (hid_t)-1);
+ CHECK(ret, FAIL, "H5Rcreate");
+ ret = H5Rget_obj_type2(dataset, H5R_OBJECT, &oref, &obj_type);
+ CHECK(ret, FAIL, "H5Rget_obj_type2");
+ VERIFY(obj_type, H5O_TYPE_DATASET, "H5Rget_obj_type2");
+
+ /* Write selection to disk */
+ ret = H5Dwrite(dataset, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, &oref);
+ CHECK(ret, FAIL, "H5Dwrite");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Delete referenced dataset */
+ ret = H5Ldelete(fid1, "/Dataset1", H5P_DEFAULT);
+ CHECK(ret, FAIL, "H5Ldelete");
+
+ /* Close disk dataspace */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+
+ /* Re-open the file */
+ fid1 = H5Fopen(FILE3, H5F_ACC_RDWR, H5P_DEFAULT);
+ CHECK(fid1, FAIL, "H5Fopen");
+
+ /* Open the dataset */
+ dataset = H5Dopen2(fid1, "/Dataset2", H5P_DEFAULT);
+ CHECK(ret, FAIL, "H5Dopen2");
+
+ /* Open undefined reference */
+ dset2 = H5Rdereference2(dataset, H5P_DEFAULT, H5R_OBJECT, &addr);
+ VERIFY(dset2, FAIL, "H5Rdereference2");
+
+ /* Read selection from disk */
+ HDmemset(&oref, 0, sizeof(hobj_ref_t));
+ ret = H5Dread(dataset, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, &oref);
+ CHECK(ret, FAIL, "H5Dread");
+
+ /* Open deleted dataset object */
+ dset2 = H5Rdereference2(dataset, H5P_DEFAULT, H5R_OBJECT, &oref);
+ VERIFY(dset2, FAIL, "H5Rdereference2");
+
+ /* Open nonsense reference */
+ HDmemset(&oref, 0, sizeof(hobj_ref_t));
+ dset2 = H5Rdereference2(dataset, H5P_DEFAULT, H5R_OBJECT, &oref);
+ VERIFY(dset2, FAIL, "H5Rdereference2");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+} /* test_reference_obj_deleted() */
+
+/****************************************************************
+**
+** test_deref_iter_op(): Iterator callback for test_reference_group_iterate()
+** test.
+**
+****************************************************************/
+static herr_t
+test_deref_iter_op(hid_t H5_ATTR_UNUSED group, const char *name, const H5L_info_t H5_ATTR_UNUSED *info,
+ void *op_data)
+{
+ int *count = (int *)op_data; /* Pointer to name counter */
+ herr_t ret_value;
+
+ /* Simple check for correct names */
+ if(*count == 0) {
+ if(HDstrcmp(name, DSETNAME2) == 0)
+ ret_value = 0;
+ else
+ ret_value = -1;
+ } /* end if */
+ else if(*count == 1) {
+ if(HDstrcmp(name, GROUPNAME2) == 0)
+ ret_value = 0;
+ else
+ ret_value = -1;
+ } /* end if */
+ else if(*count == 2) {
+ if(HDstrcmp(name, GROUPNAME3) == 0)
+ ret_value = 0;
+ else
+ ret_value = -1;
+ } /* end if */
+ else
+ ret_value = -1;
+
+ (*count)++;
+
+ return(ret_value);
+} /* end test_deref_iter_op() */
+
+/****************************************************************
+**
+** test_reference_group(): Test H5R (reference) object reference code.
+** Tests for correct behavior of various routines on dereferenced group
+**
+****************************************************************/
+static void
+test_reference_group(void)
+{
+ hid_t fid = -1; /* File ID */
+ hid_t gid = -1, gid2 = -1; /* Group IDs */
+ hid_t did; /* Dataset ID */
+ hid_t sid; /* Dataspace ID */
+ hobj_ref_t wref; /* Reference to write */
+ hobj_ref_t rref; /* Reference to read */
+ H5G_info_t ginfo; /* Group info struct */
+ char objname[NAME_SIZE]; /* Buffer to store name */
+ H5O_info_t oinfo; /* Object info struct */
+ int count = 0; /* Count within iterated group */
+ ssize_t size; /* Name length */
+ herr_t ret;
+
+ /* Create file with a group and a dataset containing an object reference to the group */
+ fid = H5Fcreate(FILE1, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(fid, FAIL, "H5Fcreate");
+
+ /* Create dataspace to use for dataset */
+ sid = H5Screate(H5S_SCALAR);
+ CHECK(sid, FAIL, "H5Screate");
+
+ /* Create group to refer to */
+ gid = H5Gcreate2(fid, GROUPNAME, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(gid, FAIL, "H5Gcreate2");
+
+ /* Create nested groups */
+ gid2 = H5Gcreate2(gid, GROUPNAME2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(gid2, FAIL, "H5Gcreate2");
+ ret = H5Gclose(gid2);
+ CHECK(ret, FAIL, "H5Gclose");
+
+ gid2 = H5Gcreate2(gid, GROUPNAME3, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(gid2, FAIL, "H5Gcreate2");
+ ret = H5Gclose(gid2);
+ CHECK(ret, FAIL, "H5Gclose");
+
+ /* Create bottom dataset */
+ did = H5Dcreate2(gid, DSETNAME2, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ assert(did > 0);
+ ret = H5Dclose(did);
+ assert(ret >= 0);
+
+ ret = H5Gclose(gid);
+ CHECK(ret, FAIL, "H5Gclose");
+
+ /* Create dataset */
+ did = H5Dcreate2(fid, DSETNAME, H5T_STD_REF_OBJ, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(did, FAIL, "H5Dcreate2");
+
+ /* Create reference to group */
+ ret = H5Rcreate(&wref, fid, GROUPNAME, H5R_OBJECT, (hid_t)-1);
+ CHECK(ret, FAIL, "H5Rcreate");
+
+ /* Write reference to disk */
+ ret = H5Dwrite(did, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, &wref);
+ CHECK(ret, FAIL, "H5Dwrite");
+
+ /* Close objects */
+ ret = H5Dclose(did);
+ CHECK(ret, FAIL, "H5Dclose");
+ ret = H5Sclose(sid);
+ CHECK(ret, FAIL, "H5Sclose");
+ ret = H5Fclose(fid);
+ CHECK(ret, FAIL, "H5Fclose");
+
+
+ /* Re-open file */
+ fid = H5Fopen(FILE1, H5F_ACC_RDWR, H5P_DEFAULT);
+ CHECK(fid, FAIL, "H5Fopen");
+
+ /* Re-open dataset */
+ did = H5Dopen2(fid, DSETNAME, H5P_DEFAULT);
+ CHECK(did, FAIL, "H5Dopen2");
+
+ /* Read in the reference */
+ ret = H5Dread(did, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, &rref);
+ CHECK(ret, FAIL, "H5Dread");
+
+ /* Dereference to get the group */
+ gid = H5Rdereference2(did, H5P_DEFAULT, H5R_OBJECT, &rref);
+ CHECK(gid, FAIL, "H5Rdereference2");
+
+ /* Iterate through objects in dereferenced group */
+ ret = H5Literate(gid, H5_INDEX_NAME, H5_ITER_INC, NULL, test_deref_iter_op, &count);
+ CHECK(ret, FAIL, "H5Literate");
+
+ /* Various queries on the group opened */
+ ret = H5Gget_info(gid, &ginfo);
+ CHECK(ret, FAIL, "H5Gget_info");
+ VERIFY(ginfo.nlinks, 3, "H5Gget_info");
+
+ size = H5Lget_name_by_idx(gid, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)0, objname, (size_t)NAME_SIZE, H5P_DEFAULT);
+ CHECK(size, FAIL, "H5Lget_name_by_idx");
+ VERIFY_STR(objname, DSETNAME2, "H5Lget_name_by_idx");
+
+ ret = H5Oget_info_by_idx2(gid, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)0, &oinfo, H5O_INFO_BASIC, H5P_DEFAULT);
+ CHECK(ret, FAIL, "H5Oget_info_by_idx");
+ VERIFY(oinfo.type, H5O_TYPE_DATASET, "H5Oget_info_by_idx");
+
+ /* Unlink one of the objects in the dereferenced group */
+ ret = H5Ldelete(gid, GROUPNAME2, H5P_DEFAULT);
+ CHECK(ret, FAIL, "H5Ldelete");
+
+ /* Delete dataset object in dereferenced group (with other dataset still open) */
+ ret = H5Ldelete(gid, DSETNAME2, H5P_DEFAULT);
+ CHECK(ret, FAIL, "H5Ldelete");
+
+ /* Close objects */
+ ret = H5Dclose(did);
+ CHECK(ret, FAIL, "H5Dclose");
+ ret = H5Gclose(gid);
+ CHECK(ret, FAIL, "H5Gclose");
+ ret = H5Fclose(fid);
+ CHECK(ret, FAIL, "H5Fclose");
+} /* test_reference_group() */
+
+#ifndef H5_NO_DEPRECATED_SYMBOLS
+/****************************************************************
+**
+** test_reference_compat(): Test basic H5R (reference) object reference code.
+** Tests deprecated API routines
+**
+****************************************************************/
+static void
+test_reference_compat(void)
+{
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t dataset, dset2; /* Dataset ID */
+ hid_t group, group2; /* Group ID */
+ hid_t sid1, /* Dataspace IDs */
+ sid2;
+ hid_t tid1, tid2; /* Datatype ID */
+ hsize_t dims1[] = {SPACE1_DIM1},
+ dims2[] = {SPACE2_DIM1, SPACE2_DIM2};
+ hsize_t start[SPACE2_RANK]; /* Starting location of hyperslab */
+ hsize_t stride[SPACE2_RANK]; /* Stride of hyperslab */
+ hsize_t count[SPACE2_RANK]; /* Element count of hyperslab */
+ hsize_t block[SPACE2_RANK]; /* Block size of hyperslab */
+ hsize_t coord1[POINT1_NPOINTS][SPACE2_RANK]; /* Coordinates for point selection */
+ hobj_ref_t *wbuf_obj, /* Buffer to write to disk */
+ *rbuf_obj; /* Buffer read from disk */
+ hdset_reg_ref_t *wbuf_reg, /* Buffer to write to disk */
+ *rbuf_reg; /* Buffer read from disk */
+ H5G_obj_t obj_type; /* Object type */
+ herr_t ret; /* Generic return value */
+
+ /* Output message about test being performed */
+ MESSAGE(5, ("Testing Deprecated Object Reference Functions\n"));
+
+ /* Allocate write & read buffers */
+ wbuf_obj = (hobj_ref_t *)HDcalloc(sizeof(hobj_ref_t), SPACE1_DIM1);
+ rbuf_obj = (hobj_ref_t *)HDmalloc(sizeof(hobj_ref_t) * SPACE1_DIM1);
+ wbuf_reg = (hdset_reg_ref_t *)HDcalloc(sizeof(hdset_reg_ref_t), SPACE1_DIM1);
+ rbuf_reg = (hdset_reg_ref_t *)HDmalloc(sizeof(hdset_reg_ref_t) * SPACE1_DIM1);
+
+ /* Create file */
+ fid1 = H5Fcreate(FILE1, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(fid1, FAIL, "H5Fcreate");
+
+ /* Create dataspace for datasets */
+ sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL);
+ CHECK(sid1, FAIL, "H5Screate_simple");
+
+ /* Create another dataspace for datasets */
+ sid2 = H5Screate_simple(SPACE2_RANK, dims2, NULL);
+ CHECK(sid2, FAIL, "H5Screate_simple");
+
+ /* Create a group */
+ group = H5Gcreate2(fid1, "Group1", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(group, FAIL, "H5Gcreate2");
+
+ /* Create a dataset (inside Group1) */
+ dataset = H5Dcreate2(group, "Dataset1", H5T_NATIVE_UINT, sid2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, FAIL, "H5Dcreate2");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Create another dataset (inside Group1) */
+ dataset = H5Dcreate2(group, "Dataset2", H5T_NATIVE_UCHAR, sid2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, FAIL, "H5Dcreate2");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Create a datatype to refer to */
+ tid1 = H5Tcreate(H5T_COMPOUND, sizeof(s1_t));
+ CHECK(tid1, FAIL, "H5Tcreate");
+
+ /* Insert fields */
+ ret = H5Tinsert(tid1, "a", HOFFSET(s1_t,a), H5T_NATIVE_INT);
+ CHECK(ret, FAIL, "H5Tinsert");
+
+ ret = H5Tinsert(tid1, "b", HOFFSET(s1_t,b), H5T_NATIVE_INT);
+ CHECK(ret, FAIL, "H5Tinsert");
+
+ ret = H5Tinsert(tid1, "c", HOFFSET(s1_t,c), H5T_NATIVE_FLOAT);
+ CHECK(ret, FAIL, "H5Tinsert");
+
+ /* Save datatype for later */
+ ret = H5Tcommit2(group, "Datatype1", tid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(ret, FAIL, "H5Tcommit2");
+
+ /* Close datatype */
+ ret = H5Tclose(tid1);
+ CHECK(ret, FAIL, "H5Tclose");
+
+ /* Close group */
+ ret = H5Gclose(group);
+ CHECK(ret, FAIL, "H5Gclose");
+
+
+ /* Create a dataset with object reference datatype */
+ dataset = H5Dcreate2(fid1, "Dataset3", H5T_STD_REF_OBJ, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, FAIL, "H5Dcreate2");
+
+ /* Create reference to dataset */
+ ret = H5Rcreate(&wbuf_obj[0], fid1, "/Group1/Dataset1", H5R_OBJECT, (hid_t)-1);
+ CHECK(ret, FAIL, "H5Rcreate");
+
+ /* Create reference to dataset */
+ ret = H5Rcreate(&wbuf_obj[1], fid1, "/Group1/Dataset2", H5R_OBJECT, (hid_t)-1);
+ CHECK(ret, FAIL, "H5Rcreate");
+
+ /* Create reference to group */
+ ret = H5Rcreate(&wbuf_obj[2], fid1, "/Group1", H5R_OBJECT, (hid_t)-1);
+ CHECK(ret, FAIL, "H5Rcreate");
+
+ /* Create reference to named datatype */
+ ret = H5Rcreate(&wbuf_obj[3], fid1, "/Group1/Datatype1", H5R_OBJECT, (hid_t)-1);
+ CHECK(ret, FAIL, "H5Rcreate");
+
+ /* Write references to disk */
+ ret = H5Dwrite(dataset, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf_obj);
+ CHECK(ret, FAIL, "H5Dwrite");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+
+ /* Create a dataset with region reference datatype */
+ dataset = H5Dcreate2(fid1, "Dataset4", H5T_STD_REF_DSETREG, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(dataset, FAIL, "H5Dcreate2");
+
+ /* Select 6x6 hyperslab for first reference */
+ start[0] = 2; start[1] = 2;
+ stride[0] = 1; stride[1] = 1;
+ count[0] = 1; count[1] = 1;
+ block[0] = 6; block[1] = 6;
+ ret = H5Sselect_hyperslab(sid2, H5S_SELECT_SET, start, stride, count, block);
+ CHECK(ret, FAIL, "H5Sselect_hyperslab");
+
+ /* Create first dataset region */
+ ret = H5Rcreate(&wbuf_reg[0], fid1, "/Group1/Dataset1", H5R_DATASET_REGION, sid2);
+ CHECK(ret, FAIL, "H5Rcreate");
+
+ /* Select sequence of ten points for second reference */
+ coord1[0][0] = 6; coord1[0][1] = 9;
+ coord1[1][0] = 2; coord1[1][1] = 2;
+ coord1[2][0] = 8; coord1[2][1] = 4;
+ coord1[3][0] = 1; coord1[3][1] = 6;
+ coord1[4][0] = 2; coord1[4][1] = 8;
+ coord1[5][0] = 3; coord1[5][1] = 2;
+ coord1[6][0] = 0; coord1[6][1] = 4;
+ coord1[7][0] = 9; coord1[7][1] = 0;
+ coord1[8][0] = 7; coord1[8][1] = 1;
+ coord1[9][0] = 3; coord1[9][1] = 3;
+ ret = H5Sselect_elements(sid2, H5S_SELECT_SET, (size_t)POINT1_NPOINTS, (const hsize_t *)coord1);
+ CHECK(ret, FAIL, "H5Sselect_elements");
+
+ /* Create second dataset region */
+ ret = H5Rcreate(&wbuf_reg[1], fid1, "/Group1/Dataset2", H5R_DATASET_REGION, sid2);
+ CHECK(ret, FAIL, "H5Rcreate");
+
+ /* Write selection to disk */
+ ret = H5Dwrite(dataset, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, wbuf_reg);
+ CHECK(ret, FAIL, "H5Dwrite");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+
+ /* Close disk dataspaces */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
+ ret = H5Sclose(sid2);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+
+
+ /* Re-open the file */
+ fid1 = H5Fopen(FILE1, H5F_ACC_RDWR, H5P_DEFAULT);
+ CHECK(fid1, FAIL, "H5Fopen");
+
+ /* Open the object reference dataset */
+ dataset = H5Dopen2(fid1, "/Dataset3", H5P_DEFAULT);
+ CHECK(dataset, FAIL, "H5Dopen2");
+
+ /* Read selection from disk */
+ ret = H5Dread(dataset, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf_obj);
+ CHECK(ret, FAIL, "H5Dread");
+
+ /* Verify type of objects pointed at */
+ obj_type = H5Rget_obj_type1(dataset, H5R_OBJECT, &rbuf_obj[0]);
+ CHECK(obj_type, H5G_UNKNOWN, "H5Rget_obj_type1");
+ VERIFY(obj_type, H5G_DATASET, "H5Rget_obj_type1");
+
+ obj_type = H5Rget_obj_type1(dataset, H5R_OBJECT, &rbuf_obj[1]);
+ CHECK(obj_type, H5G_UNKNOWN, "H5Rget_obj_type1");
+ VERIFY(obj_type, H5G_DATASET, "H5Rget_obj_type1");
+
+ obj_type = H5Rget_obj_type1(dataset, H5R_OBJECT, &rbuf_obj[2]);
+ CHECK(obj_type, H5G_UNKNOWN, "H5Rget_obj_type1");
+ VERIFY(obj_type, H5G_GROUP, "H5Rget_obj_type1");
+
+ obj_type = H5Rget_obj_type1(dataset, H5R_OBJECT, &rbuf_obj[3]);
+ CHECK(obj_type, H5G_UNKNOWN, "H5Rget_obj_type1");
+ VERIFY(obj_type, H5G_TYPE, "H5Rget_obj_type1");
+
+
+ /* Make sure the referenced objects can be opened */
+ dset2 = H5Rdereference1(dataset, H5R_OBJECT, &rbuf_obj[0]);
+ CHECK(dset2, FAIL, "H5Rdereference1");
+
+ ret = H5Dclose(dset2);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ dset2 = H5Rdereference1(dataset, H5R_OBJECT, &rbuf_obj[1]);
+ CHECK(dset2, FAIL, "H5Rdereference1");
+
+ ret = H5Dclose(dset2);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ group2 = H5Rdereference1(dataset, H5R_OBJECT, &rbuf_obj[2]);
+ CHECK(group2, FAIL, "H5Rdereference1");
+
+ ret = H5Gclose(group2);
+ CHECK(ret, FAIL, "H5Gclose");
+
+ tid2 = H5Rdereference1(dataset, H5R_OBJECT, &rbuf_obj[3]);
+ CHECK(tid2, FAIL, "H5Rdereference1");
+
+ ret = H5Tclose(tid2);
+ CHECK(ret, FAIL, "H5Tclose");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+
+ /* Open the dataset region reference dataset */
+ dataset = H5Dopen2(fid1, "/Dataset4", H5P_DEFAULT);
+ CHECK(ret, FAIL, "H5Dopen2");
+
+ /* Read selection from disk */
+ ret = H5Dread(dataset, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf_reg);
+ CHECK(ret, FAIL, "H5Dread");
+
+ /* Verify type of objects pointed at */
+ obj_type = H5Rget_obj_type1(dataset, H5R_DATASET_REGION, &rbuf_reg[0]);
+ CHECK(obj_type, H5G_UNKNOWN, "H5Rget_obj_type1");
+ VERIFY(obj_type, H5G_DATASET, "H5Rget_obj_type1");
+
+ obj_type = H5Rget_obj_type1(dataset, H5R_DATASET_REGION, &rbuf_reg[1]);
+ CHECK(obj_type, H5G_UNKNOWN, "H5Rget_obj_type1");
+ VERIFY(obj_type, H5G_DATASET, "H5Rget_obj_type1");
+
+ obj_type = H5Rget_obj_type1(dataset, H5R_DATASET_REGION, &rbuf_reg[2]);
+ VERIFY(obj_type, H5G_UNKNOWN, "H5Rget_obj_type1");
+
+ obj_type = H5Rget_obj_type1(dataset, H5R_DATASET_REGION, &rbuf_reg[3]);
+ VERIFY(obj_type, H5G_UNKNOWN, "H5Rget_obj_type1");
+
+ /* Make sure the referenced objects can be opened */
+ dset2 = H5Rdereference1(dataset, H5R_DATASET_REGION, &rbuf_reg[0]);
+ CHECK(dset2, FAIL, "H5Rdereference1");
+
+ ret = H5Dclose(dset2);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ dset2 = H5Rdereference1(dataset, H5R_DATASET_REGION, &rbuf_reg[1]);
+ CHECK(dset2, FAIL, "H5Rdereference1");
+
+ ret = H5Dclose(dset2);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+
+ /* Free memory buffers */
+ HDfree(wbuf_obj);
+ HDfree(rbuf_obj);
+ HDfree(wbuf_reg);
+ HDfree(rbuf_reg);
+} /* test_reference_compat() */
+#endif /* H5_NO_DEPRECATED_SYMBOLS */
+
+/****************************************************************
+**
+** test_reference_deprec(): Main H5R reference testing routine.
+**
+****************************************************************/
+void
+test_reference_deprec(void)
+{
+ H5F_libver_t low, high; /* Low and high bounds */
+
+ /* Output message about test being performed */
+ MESSAGE(5, ("Testing Deprecated References\n"));
+
+ test_reference_params(); /* Test for correct parameter checking */
+ test_reference_obj(); /* Test basic H5R object reference code */
+
+ /* Loop through all the combinations of low/high version bounds */
+ for(low = H5F_LIBVER_EARLIEST; low < H5F_LIBVER_NBOUNDS; H5_INC_ENUM(H5F_libver_t, low)) {
+ for(high = H5F_LIBVER_EARLIEST; high < H5F_LIBVER_NBOUNDS; H5_INC_ENUM(H5F_libver_t, high)) {
+
+ /* Invalid combinations, just continue */
+ if(high == H5F_LIBVER_EARLIEST || high < low)
+ continue;
+
+ test_reference_region(low, high); /* Test basic H5R dataset region reference code */
+ test_reference_region_1D(low, high); /* Test H5R dataset region reference code for 1-D datasets */
+
+ } /* end high bound */
+ } /* end low bound */
+
+ test_reference_obj_deleted(); /* Test H5R object reference code for deleted objects */
+ test_reference_group(); /* Test operations on dereferenced groups */
+#ifndef H5_NO_DEPRECATED_SYMBOLS
+ test_reference_compat(); /* Test operations with old API routines */
+#endif /* H5_NO_DEPRECATED_SYMBOLS */
+
+} /* test_reference() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: cleanup_reference
+ *
+ * Purpose: Cleanup temporary test files
+ *
+ * Return: none
+ *
+ * Programmer: Quincey Koziol
+ * September 8, 1998
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+void
+cleanup_reference_deprec(void)
+{
+ HDremove(FILE1);
+ HDremove(FILE2);
+ HDremove(FILE3);
+}
+