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authorAlbert Cheng <acheng@hdfgroup.org>2002-10-19 20:59:19 (GMT)
committerAlbert Cheng <acheng@hdfgroup.org>2002-10-19 20:59:19 (GMT)
commit16b3cfabba29004470312ede6b107bb76e7a1451 (patch)
treeadeec53f193b0b0b3375e0c7ecb48402b4f7614c /tools/h5dump/h5dumptst.c
parentc6c7a21bf0323bef8add000a4fe92a8f4a79e6f2 (diff)
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[svn-r6017] Description:
Renamed h5dumptst.c to h5dumpgentest.c. Added a test to run h5dumpgentest to make it can run without error. Note that this does not verify if it is generating the correct test files. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)}? YES Misc. update: Update MANIFEST if you add or remove any file. YES
Diffstat (limited to 'tools/h5dump/h5dumptst.c')
-rw-r--r--tools/h5dump/h5dumptst.c2893
1 files changed, 0 insertions, 2893 deletions
diff --git a/tools/h5dump/h5dumptst.c b/tools/h5dump/h5dumptst.c
deleted file mode 100644
index 9687140..0000000
--- a/tools/h5dump/h5dumptst.c
+++ /dev/null
@@ -1,2893 +0,0 @@
-/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
- * Copyright by the Board of Trustees of the University of Illinois. *
- * All rights reserved. *
- * *
- * This file is part of HDF5. The full HDF5 copyright notice, including *
- * terms governing use, modification, and redistribution, is contained in *
- * the files COPYING and Copyright.html. COPYING can be found at the root *
- * of the source code distribution tree; Copyright.html can be found at the *
- * root level of an installed copy of the electronic HDF5 document set and *
- * is linked from the top-level documents page. It can also be found at *
- * http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
- * access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
- * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
-
-/*
- * Generate the binary hdf5 files for the h5dump tests.
- * Usage: just execute the program without any arguments will
- * generate all the binary hdf5 files in the local directory.
- *
- * If you regenerate the test files (e.g., changing some code,
- * trying it on a new platform, ...), you need to verify the correctness
- * of the expected output and update the corresponding *.ddl files.
- */
-#include <limits.h>
-
-#include "hdf5.h"
-#include "H5private.h"
-
-#define FILE1 "tgroup.h5"
-#define FILE2 "tdset.h5"
-#define FILE3 "tattr.h5"
-#define FILE4 "tslink.h5"
-#define FILE5 "thlink.h5"
-#define FILE6 "tcompound.h5"
-#define FILE7 "tall.h5"
-#define FILE8 "tdset2.h5"
-#define FILE9 "tcompound2.h5"
-#define FILE10 "tloop.h5"
-#define FILE11 "tloop2.h5"
-#define FILE12 "tmany.h5"
-#define FILE13 "tstr.h5"
-#define FILE14 "tstr2.h5"
-#define FILE15 "tenum.h5"
-#define FILE16 "tobjref.h5"
-#define FILE17 "tdatareg.h5"
-#define FILE18 "tnestedcomp.h5"
-#define FILE19 "topaque.h5"
-#define FILE20 "tbitfields.h5"
-#define FILE21 "tvldtypes1.h5"
-#define FILE22 "tvldtypes2.h5"
-#define FILE23 "tvldtypes3.h5"
-#define FILE24 "tvldtypes4.h5"
-#define FILE25 "tarray1.h5"
-#define FILE26 "tarray2.h5"
-#define FILE27 "tarray3.h5"
-#define FILE28 "tarray4.h5"
-#define FILE29 "tarray5.h5"
-#define FILE30 "tarray6.h5"
-#define FILE31 "tarray7.h5"
-#define FILE32 "tempty.h5"
-#define FILE33 "tgrp_comments.h5"
-#define FILE34 "tsplit_file"
-#define FILE35 "tfamily%05d.h5"
-#define FILE36 "tmulti"
-#define FILE37 "tlarge_objname.h5"
-
-#define LENSTR 50
-#define LENSTR2 11
-
-#define SPACE2_RANK 2
-#define SPACE2_DIM1 10
-#define SPACE2_DIM2 10
-
-#define SPACE1_RANK 1
-#define SPACE1_DIM1 4
-
-/* Element selection information */
-#define POINT1_NPOINTS 10
-
-typedef enum{
- RED,
- GREEN,
- BLUE,
- WHITE,
- BLACK
-} enumtype;
-
-/* Compound datatype */
-typedef struct s1_t {
- unsigned int a;
- unsigned int b;
- float c;
-} s1_t;
-
-
-/* 1-D array datatype */
-#define ARRAY1_RANK 1
-#define ARRAY1_DIM1 4
-
-/* 3-D array datatype */
-#define ARRAY2_RANK 3
-#define ARRAY2_DIM1 3
-#define ARRAY2_DIM2 4
-#define ARRAY2_DIM3 5
-
-/* 2-D array datatype */
-#define ARRAY3_RANK 2
-#define ARRAY3_DIM1 6
-#define ARRAY3_DIM2 3
-
-static void test_group(void)
-{
- hid_t fid, group;
-
- fid = H5Fcreate(FILE1, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- /* / */
- group = H5Gcreate (fid, "/g1", 0);
- H5Gclose(group);
- group = H5Gcreate (fid, "/g2", 0);
- H5Gclose(group);
- group = H5Gcreate (fid, "/g3", 0);
- H5Gclose(group);
-
- /* /g1 */
- group = H5Gcreate (fid, "/g1/g1.1", 0);
- H5Gclose(group);
- group = H5Gcreate (fid, "/g1/g1.2", 0);
- H5Gclose(group);
-
- /* /g2 */
- group = H5Gcreate (fid, "/g2/g2.1", 0);
- H5Gclose(group);
-
- /* /g3 */
- group = H5Gcreate (fid, "/g3/g3.1", 0);
- H5Gclose(group);
- group = H5Gcreate (fid, "/g3/g3.2", 0);
- H5Gclose(group);
- group = H5Gcreate (fid, "/g3/g3.3", 0);
- H5Gclose(group);
- group = H5Gcreate (fid, "/g3/g3.4", 0);
- H5Gclose(group);
-
- /* /g2/g2.1 */
- group = H5Gcreate (fid, "/g2/g2.1/g2.1.1", 0);
- H5Gclose(group);
- group = H5Gcreate (fid, "/g2/g2.1/g2.1.2", 0);
- H5Gclose(group);
- group = H5Gcreate (fid, "/g2/g2.1/g2.1.3", 0);
- H5Gclose(group);
-
- H5Fclose(fid);
-}
-
-static void test_dataset(void)
-{
- hid_t fid, dataset, space;
- hsize_t dims[2];
- int dset1[10][20];
- double dset2[30][20];
- int i, j;
-
- fid = H5Fcreate(FILE2, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- /* dset1 */
- dims[0] = 10; dims[1] = 20;
- space = H5Screate_simple(2, dims, NULL);
- dataset = H5Dcreate(fid, "/dset1", H5T_STD_I32BE, space, H5P_DEFAULT);
-
- for (i = 0; i < 10; i++)
- for (j = 0; j < 20; j++)
- dset1[i][j] = j+i;
-
- H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset1);
- H5Sclose(space);
- H5Dclose(dataset);
-
- /* dset2 */
- dims[0] = 30; dims[1] = 20;
- space = H5Screate_simple(2, dims, NULL);
- dataset = H5Dcreate(fid, "/dset2", H5T_IEEE_F64BE, space, H5P_DEFAULT);
-
- for (i = 0; i < 30; i++)
- for (j = 0; j < 20; j++)
- dset2[i][j] = 0.0001*j+i;
-
- H5Dwrite(dataset, H5T_NATIVE_DOUBLE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset2);
-
- H5Sclose(space);
- H5Dclose(dataset);
- H5Fclose(fid);
-}
-
-static void test_dataset2(void)
-{
- hid_t fid, dataset, space, create_plist;
- hsize_t dims[2];
- hsize_t maxdims[2];
- int dset1[10][20];
- double dset2[30][10];
- int i, j;
-
- fid = H5Fcreate(FILE8, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
- create_plist = H5Pcreate(H5P_DATASET_CREATE);
- dims[0] = 5; dims[1] = 5;
- H5Pset_chunk(create_plist, 2, dims);
-
- /* dset1 */
- dims[0] = 10; dims[1] = 20;
- maxdims[0] = H5S_UNLIMITED; maxdims[1] = 20;
- space = H5Screate_simple(2, dims, maxdims);
- dataset = H5Dcreate(fid, "/dset1", H5T_STD_I32BE, space, create_plist);
-
- for (i = 0; i < 10; i++)
- for (j = 0; j < 20; j++)
- dset1[i][j] = j;
-
- H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset1);
- H5Sclose(space);
- H5Dclose(dataset);
-
- /* dset2 */
- dims[0] = 30; dims[1] = 10;
- maxdims[0] = 30; maxdims[1] = H5S_UNLIMITED;
- space = H5Screate_simple(2, dims, maxdims);
- dataset = H5Dcreate(fid, "/dset2", H5T_IEEE_F64BE, space, create_plist);
-
- for (i = 0; i < 30; i++)
- for (j = 0; j < 10; j++)
- dset2[i][j] = j;
-
- H5Dwrite(dataset, H5T_NATIVE_DOUBLE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset2);
-
- H5Sclose(space);
- H5Dclose(dataset);
- H5Pclose(create_plist);
- H5Fclose(fid);
-}
-
-
-static void test_attribute(void)
-{
- hid_t fid, root, space, attr, type;
- hsize_t dims[2];
- char buf[60];
- int i, data[10];
- double d[10];
- char string[]= "string attribute";
- int point = 100;
-
- fid = H5Fcreate(FILE3, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
- root = H5Gopen (fid, "/");
-
- /* attribute 1 */
- dims[0] = 24;
- space = H5Screate_simple(1, dims, NULL);
- attr = H5Acreate (root, "attr1", H5T_STD_I8BE, space, H5P_DEFAULT);
- sprintf(buf, "attribute of root group");
- H5Awrite(attr, H5T_NATIVE_SCHAR, buf);
- H5Sclose(space);
- H5Aclose(attr);
-
- /* attribute 2 */
- dims[0] = 10;
- space = H5Screate_simple(1, dims, NULL);
- attr = H5Acreate (root, "attr2", H5T_STD_I32BE, space, H5P_DEFAULT);
-
- for (i = 0; i < 10; i++) data[i] = i+1;
-
- H5Awrite(attr, H5T_NATIVE_INT, data);
- H5Sclose(space);
- H5Aclose(attr);
-
- /* attribute 3 */
- dims[0] = 10;
- space = H5Screate_simple(1, dims, NULL);
- attr = H5Acreate (root, "attr3", H5T_IEEE_F64BE, space, H5P_DEFAULT);
-
- for (i = 0; i < 10; i++) d[i] = 0.1 * i;
-
- H5Awrite(attr, H5T_NATIVE_DOUBLE, d);
- H5Sclose(space);
- H5Aclose(attr);
-
- /* attribute 4 */
- space = H5Screate(H5S_SCALAR);
- attr = H5Acreate (root, "attr4", H5T_STD_I32BE, space, H5P_DEFAULT);
- H5Awrite(attr, H5T_NATIVE_INT, &point);
- H5Sclose(space);
- H5Aclose(attr);
-
- /* attribute 5 */
- space = H5Screate(H5S_SCALAR);
- type = H5Tcopy(H5T_C_S1);
- H5Tset_size(type, 17);
- attr = H5Acreate (root, "attr5", type, space, H5P_DEFAULT);
- H5Awrite(attr, type, string);
-
- H5Tclose(type);
- H5Sclose(space);
- H5Aclose(attr);
- H5Gclose(root);
- H5Fclose(fid);
-}
-
-static void test_softlink(void)
-{
- hid_t fid, root;
-
- fid = H5Fcreate(FILE4, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
- root = H5Gopen (fid, "/");
- H5Glink (root, H5G_LINK_SOFT, "somevalue", "slink1");
- H5Glink (root, H5G_LINK_SOFT, "linkvalue", "slink2");
-
- H5Gclose(root);
- H5Fclose(fid);
-}
-
-/*
- /
-
- / | \ the dataset is hardlinked to three names
- /dset1, /g1/dset2, and /g1/g1.1/dset3
- dset1 g1 g2
- /g2 and /g1/g1.1 are hardlinked to the same object.
- / \
- dset2 g1.1
- |
- dset3
-*/
-
-static void test_hardlink(void)
-{
- hid_t fid, group, dataset, space;
- hsize_t dim = 5;
- int i, dset[5];
-
- fid = H5Fcreate(FILE5, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- space = H5Screate_simple(1, &dim, NULL);
- dataset = H5Dcreate(fid, "/dset1", H5T_STD_I32BE, space, H5P_DEFAULT);
-
- for (i = 0; i < 5; i++) dset[i] = i;
-
- H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset);
- H5Sclose(space);
- H5Dclose(dataset);
-
- group = H5Gcreate (fid, "/g1", 0);
- H5Glink (group, H5G_LINK_HARD, "/dset1", "dset2");
- H5Gclose(group);
-
- group = H5Gcreate (fid, "/g2", 0);
- H5Glink (group, H5G_LINK_HARD, "/dset1", "dset3");
- H5Gclose(group);
-
- group = H5Gopen(fid, "/g1");
- H5Glink (group, H5G_LINK_HARD, "/g2", "g1.1");
- H5Gclose(group);
- H5Fclose(fid);
-}
-
-/*
- /
- / | \ \
- dset1 group1 type1 type2
- |
- dset2
-
-*/
-static void test_compound_dt(void) { /* test compound data type */
- hid_t fid, group, dataset, space, space3, type, type2;
- hid_t array_dt;
- typedef struct {
- int a;
- float b;
- double c;
- } dset1_t;
- dset1_t dset1[5];
-
- typedef struct {
- int a;
- float b;
- } dset2_t;
- dset2_t dset2[5];
-
- typedef struct {
- int a[4];
- float b[5][6];
- } dset3_t;
- dset3_t dset3[3][6];
-
- typedef struct {
- int a;
- float b;
- } dset4_t;
- dset4_t dset4[5];
-
- typedef struct {
- int a;
- float b;
- } dset5_t;
- dset5_t dset5[5];
-
- int i, j, k, l, ndims;
- hsize_t dim[2];
-
- hsize_t sdim = 5;
- hsize_t dset3_dim[2];
-
-
- for (i = 0; i < (int)sdim; i++) {
- dset1[i].a = i;
- dset1[i].b = (float)(i*i);
- dset1[i].c = (float)(1./(i+1));
-
- dset2[i].a = i;
- dset2[i].b = (float)(i+ i*0.1);
-
- dset4[i].a = i;
- dset4[i].b = (float)(i+3);
-
- dset5[i].a = i;
- dset5[i].b = (float)(i*0.1);
- }
-
-
- fid = H5Fcreate(FILE6, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- space = H5Screate_simple(1, &sdim, NULL);
-
- type = H5Tcreate (H5T_COMPOUND, sizeof(dset1[0]));
- type2 = H5Tcreate(H5T_COMPOUND, sizeof(dset1[0]));
- H5Tinsert(type, "a_name", HOFFSET(dset1_t, a), H5T_STD_I32BE);
- H5Tinsert(type, "b_name", HOFFSET(dset1_t, b), H5T_IEEE_F32BE);
- H5Tinsert(type, "c_name", HOFFSET(dset1_t, c), H5T_IEEE_F64BE);
- H5Tinsert(type2, "a_name", HOFFSET(dset1_t, a), H5T_NATIVE_INT);
- H5Tinsert(type2, "b_name", HOFFSET(dset1_t, b), H5T_NATIVE_FLOAT);
- H5Tinsert(type2, "c_name", HOFFSET(dset1_t, c), H5T_NATIVE_DOUBLE);
- dataset = H5Dcreate(fid, "/dset1", type, space, H5P_DEFAULT);
- H5Dwrite(dataset, type2, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset1);
- H5Tclose(type2);
- H5Tclose(type);
- H5Dclose(dataset);
-
- /* shared data type 1 */
- type = H5Tcreate (H5T_COMPOUND, sizeof(dset2_t));
- H5Tinsert(type, "int_name", HOFFSET(dset2_t, a), H5T_STD_I32BE);
- H5Tinsert(type, "float_name", HOFFSET(dset2_t, b), H5T_IEEE_F32BE);
- H5Tcommit(fid, "type1", type);
- type2 = H5Tcreate (H5T_COMPOUND, sizeof(dset2_t));
- H5Tinsert(type2, "int_name", HOFFSET(dset2_t, a), H5T_NATIVE_INT);
- H5Tinsert(type2, "float_name", HOFFSET(dset2_t, b), H5T_NATIVE_FLOAT);
- group = H5Gcreate (fid, "/group1", 0);
-
- dataset = H5Dcreate(group, "dset2", type, space, H5P_DEFAULT);
- H5Dwrite(dataset, type2, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset2);
- H5Tclose(type2);
- H5Tclose(type);
- H5Dclose(dataset);
-
-
- /* shared data type 2 */
- type = H5Tcreate (H5T_COMPOUND, sizeof(dset3_t));
- type2 = H5Tcreate (H5T_COMPOUND, sizeof(dset3_t));
-
- ndims = 1; dim[0] = 4;
-
- array_dt=H5Tarray_create(H5T_STD_I32BE,ndims,dim,NULL);
- H5Tinsert(type, "int_array", HOFFSET(dset3_t, a), array_dt);
- H5Tclose(array_dt);
-
- array_dt=H5Tarray_create(H5T_NATIVE_INT,ndims,dim,NULL);
- H5Tinsert(type2, "int_array", HOFFSET(dset3_t, a), array_dt);
- H5Tclose(array_dt);
-
- ndims = 2; dim[0] = 5; dim[1] = 6;
-
- array_dt=H5Tarray_create(H5T_IEEE_F32BE,ndims,dim,NULL);
- H5Tinsert(type, "float_array", HOFFSET(dset3_t, b), array_dt);
- H5Tclose(array_dt);
-
- array_dt=H5Tarray_create(H5T_NATIVE_FLOAT,ndims,dim,NULL);
- H5Tinsert(type2, "float_array", HOFFSET(dset3_t, b), array_dt);
- H5Tclose(array_dt);
-
- H5Tcommit(fid, "type2", type);
-
-
- dset3_dim[0] = 3; dset3_dim[1] = 6;
- space3 = H5Screate_simple(2, dset3_dim, NULL);
- dataset = H5Dcreate(group, "dset3", type, space3, H5P_DEFAULT);
- for (i = 0; i < (int)dset3_dim[0]; i++) {
- for (j = 0; j < (int)dset3_dim[1]; j++) {
- for (k = 0; k < 4; k++)
- dset3[i][j].a[k] = k+j+i;
- for (k = 0; k < 5; k++)
- for (l = 0; l < 6; l++)
- dset3[i][j].b[k][l] = (float)((k+1)+l+j+i);
- }
- }
- H5Dwrite(dataset, type2, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset3);
- H5Sclose(space3);
- H5Tclose(type);
- H5Tclose(type2);
- H5Dclose(dataset);
-
- /* shared data type 3 */
- type = H5Tcreate (H5T_COMPOUND, sizeof(dset4_t));
- type2 = H5Tcreate (H5T_COMPOUND, sizeof(dset4_t));
- H5Tinsert(type, "int", HOFFSET(dset4_t, a), H5T_STD_I32BE);
- H5Tinsert(type, "float", HOFFSET(dset4_t, b), H5T_IEEE_F32BE);
- H5Tcommit(group, "type3", type);
- H5Tinsert(type2, "int", HOFFSET(dset4_t, a), H5T_NATIVE_INT);
- H5Tinsert(type2, "float", HOFFSET(dset4_t, b), H5T_NATIVE_FLOAT);
- dataset = H5Dcreate(group, "dset4", type, space, H5P_DEFAULT);
- H5Dwrite(dataset, type2, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset4);
-
- H5Tclose(type);
- H5Tclose(type2);
- H5Dclose(dataset);
- H5Gclose(group);
-
-
- /* unamed data type */
- group = H5Gcreate (fid, "/group2", 0);
-
- type = H5Tcreate (H5T_COMPOUND, sizeof(dset5_t));
- H5Tinsert(type, "int", HOFFSET(dset5_t, a), H5T_STD_I32BE);
- H5Tinsert(type, "float", HOFFSET(dset5_t, b), H5T_IEEE_F32BE);
- H5Tcommit(group, "type4", type);
- type2 = H5Tcreate (H5T_COMPOUND, sizeof(dset5_t));
- H5Tinsert(type2, "int", HOFFSET(dset5_t, a), H5T_NATIVE_INT);
- H5Tinsert(type2, "float", HOFFSET(dset5_t, b), H5T_NATIVE_FLOAT);
- dataset = H5Dcreate(group, "dset5", type, space, H5P_DEFAULT);
- H5Dwrite(dataset, type2, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset5);
-
- H5Gunlink(group,"type4");
-
- H5Tclose(type);
- H5Tclose(type2);
- H5Dclose(dataset);
- H5Sclose(space);
- H5Gclose(group);
-
- H5Fclose(fid);
-
-}
-
-/*
- /
- / | \ \
- dset1 group1 type1 type2
- |
- dset2
-
-*/
-static void test_compound_dt2(void) { /* test compound data type */
- hid_t fid, group, dataset, space, type, create_plist, type2;
- hid_t array_dt;
-
- typedef struct {
- int a;
- float b;
- double c;
- } dset1_t;
- dset1_t dset1[10];
-
- typedef struct {
- int a;
- float b;
- } dset2_t;
- dset2_t dset2[10];
-
- typedef struct {
- int a[4];
- float b[5][6];
- } dset3_t;
-
- typedef struct {
- int a;
- float b;
- } dset4_t;
- dset4_t dset4[10];
-
- typedef struct {
- int a;
- float b;
- } dset5_t;
- dset5_t dset5[10];
-
- int i, ndims;
- const int perm[2]={0,1};
- hsize_t dim[2];
-
- hsize_t sdim, maxdim;
-
- sdim = 10;
- for (i = 0; i < (int)sdim; i++) {
- dset1[i].a = i;
- dset1[i].b = (float)(i*i);
- dset1[i].c = (float)(1./(i+1));
-
- dset2[i].a = i;
- dset2[i].b = (float)(i+ i*0.1);
-
- dset4[i].a = i;
- dset4[i].b = (float)(i*1.0);
-
- dset5[i].a = i;
- dset5[i].b = (float)(i*1.0);
- }
-
- fid = H5Fcreate(FILE9, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- create_plist = H5Pcreate(H5P_DATASET_CREATE);
-
- sdim = 2;
- H5Pset_chunk(create_plist, 1, &sdim);
-
- sdim = 6;
- maxdim = H5S_UNLIMITED;
-
- space = H5Screate_simple(1, &sdim, &maxdim);
-
- type = H5Tcreate (H5T_COMPOUND, sizeof(dset1[0]));
-
- H5Tinsert(type, "a_name", HOFFSET(dset1_t, a), H5T_STD_I32BE);
- H5Tinsert(type, "b_name", HOFFSET(dset1_t, b), H5T_IEEE_F32BE);
- H5Tinsert(type, "c_name", HOFFSET(dset1_t, c), H5T_IEEE_F64BE);
-
- dataset = H5Dcreate(fid, "/dset1", type, space, create_plist);
-
- type2 = H5Tcreate (H5T_COMPOUND, sizeof(dset1[0]));
-
- H5Tinsert(type2, "a_name", HOFFSET(dset1_t, a), H5T_NATIVE_INT);
- H5Tinsert(type2, "b_name", HOFFSET(dset1_t, b), H5T_NATIVE_FLOAT);
- H5Tinsert(type2, "c_name", HOFFSET(dset1_t, c), H5T_NATIVE_DOUBLE);
-
- H5Dwrite(dataset, type2, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset1);
-
- H5Tclose(type);
- H5Tclose(type2);
- H5Sclose(space);
- H5Dclose(dataset);
-
- sdim = 6;
- maxdim = 10;
-
- space = H5Screate_simple(1, &sdim, &maxdim);
-
- /* shared data type 1 */
- type = H5Tcreate (H5T_COMPOUND, sizeof(dset2_t));
- H5Tinsert(type, "int_name", HOFFSET(dset2_t, a), H5T_STD_I32BE);
- H5Tinsert(type, "float_name", HOFFSET(dset2_t, b), H5T_IEEE_F32BE);
- H5Tcommit(fid, "type1", type);
-
- group = H5Gcreate (fid, "/group1", 0);
-
- dataset = H5Dcreate(group, "dset2", type, space, create_plist);
-
- type2 = H5Tcreate (H5T_COMPOUND, sizeof(dset2_t));
- H5Tinsert(type2, "int_name", HOFFSET(dset2_t, a), H5T_NATIVE_INT);
- H5Tinsert(type2, "float_name", HOFFSET(dset2_t, b), H5T_NATIVE_FLOAT);
- H5Dwrite(dataset, type2, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset2);
-
- H5Tclose(type);
- H5Tclose(type2);
- H5Dclose(dataset);
-
-
- /* shared data type 2 */
- type = H5Tcreate (H5T_COMPOUND, sizeof(dset3_t));
-
- ndims = 1; dim[0] = 4;
- array_dt=H5Tarray_create(H5T_STD_I32BE,ndims,dim,perm);
- H5Tinsert(type, "int_array", HOFFSET(dset3_t, a), array_dt);
- H5Tclose(array_dt);
-
- ndims = 2; dim[0] = 5; dim[1] = 6;
- array_dt=H5Tarray_create(H5T_IEEE_F32BE,ndims,dim,perm);
- H5Tinsert(type, "float_array", HOFFSET(dset3_t, b), array_dt);
- H5Tclose(array_dt);
-
- H5Tcommit(fid, "type2", type);
- H5Tclose(type);
-
- /* shared data type 3 */
- type = H5Tcreate (H5T_COMPOUND, sizeof(dset4_t));
- H5Tinsert(type, "int", HOFFSET(dset4_t, a), H5T_STD_I32BE);
- H5Tinsert(type, "float", HOFFSET(dset4_t, b), H5T_IEEE_F32BE);
- H5Tcommit(group, "type3", type);
-
- dataset = H5Dcreate(group, "dset4", type, space, create_plist);
-
- type2 = H5Tcreate (H5T_COMPOUND, sizeof(dset4_t));
- H5Tinsert(type2, "int", HOFFSET(dset4_t, a), H5T_NATIVE_INT);
- H5Tinsert(type2, "float", HOFFSET(dset4_t, b), H5T_NATIVE_FLOAT);
- H5Dwrite(dataset, type2, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset4);
-
- H5Tclose(type);
- H5Tclose(type2);
- H5Dclose(dataset);
- H5Gclose(group);
-
-
- /* unamed data type */
- group = H5Gcreate (fid, "/group2", 0);
-
- type = H5Tcreate (H5T_COMPOUND, sizeof(dset5_t));
- H5Tinsert(type, "int", HOFFSET(dset5_t, a), H5T_STD_I32BE);
- H5Tinsert(type, "float", HOFFSET(dset5_t, b), H5T_IEEE_F32BE);
- H5Tcommit(group, "type4", type);
- dataset = H5Dcreate(group, "dset5", type, space, create_plist);
- type2 = H5Tcreate (H5T_COMPOUND, sizeof(dset5_t));
- H5Tinsert(type2, "int", HOFFSET(dset5_t, a), H5T_NATIVE_INT);
- H5Tinsert(type2, "float", HOFFSET(dset5_t, b), H5T_NATIVE_FLOAT);
- H5Dwrite(dataset, type2, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset5);
-
- H5Gunlink(group,"type4");
-
- H5Tclose(type);
- H5Tclose(type2);
- H5Dclose(dataset);
- H5Sclose(space);
- H5Gclose(group);
- H5Pclose(create_plist);
-
- H5Fclose(fid);
-
-}
-
-
-/*
-
-/ : g1 g2 attr1 attr2
-g1 : g1.1 g1.2
-g1.1 : dset1.1.1(attr1, attr2) dset1.1.2
-g1.2 : g1.2.1
-g1.2.1 : slink
-g2 : dset2.1 dset2.2
-
-*/
-
-static void test_all(void) {
-hid_t fid, group, attr, dataset, space;
-hsize_t dims[2];
-int data[2][2], dset1[10][10], dset2[20];
-char buf[60];
-int i, j;
-float dset2_1[10], dset2_2[3][5];
-
- fid = H5Fcreate(FILE7, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- /* create groups */
- group = H5Gcreate (fid, "/g1", 0);
- H5Gclose(group);
-
- group = H5Gcreate (fid, "/g2", 0);
- H5Gclose(group);
-
- group = H5Gcreate (fid, "/g1/g1.1", 0);
- H5Gclose(group);
-
- group = H5Gcreate (fid, "/g1/g1.2", 0);
- H5Gclose(group);
-
- group = H5Gcreate (fid, "/g1/g1.2/g1.2.1", 0);
- H5Gclose(group);
-
- /* root attributes */
- group = H5Gopen (fid, "/");
-
- dims[0] = 10;
- space = H5Screate_simple(1, dims, NULL);
- attr = H5Acreate (group, "attr1", H5T_STD_I8BE, space, H5P_DEFAULT);
- sprintf(buf, "abcdefghi");
- H5Awrite(attr, H5T_NATIVE_SCHAR, buf);
- H5Sclose(space);
- H5Aclose(attr);
-
- dims[0] = 2; dims[1] = 2;
- space = H5Screate_simple(2, dims, NULL);
- attr = H5Acreate (group, "attr2", H5T_STD_I32BE, space, H5P_DEFAULT);
- data[0][0] = 0; data[0][1] = 1; data[1][0] = 2; data[1][1] = 3;
- H5Awrite(attr, H5T_NATIVE_INT, data);
- H5Sclose(space);
- H5Aclose(attr);
-
- H5Gclose(group);
-
- group = H5Gopen (fid, "/g1/g1.1");
-
- /* dset1.1.1 */
- dims[0] = 10; dims[1] = 10;
- space = H5Screate_simple(2, dims, NULL);
- dataset = H5Dcreate(group, "dset1.1.1", H5T_STD_I32BE, space, H5P_DEFAULT);
- for (i = 0; i < 10; i++)
- for (j = 0; j < 10; j++)
- dset1[i][j] = j*i;
- H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset1);
- H5Sclose(space);
-
- /* attributes of dset1.1.1 */
- dims[0] = 27;
- space = H5Screate_simple(1, dims, NULL);
- attr = H5Acreate (dataset, "attr1", H5T_STD_I8BE, space, H5P_DEFAULT);
- sprintf(buf, "1st attribute of dset1.1.1");
- H5Awrite(attr, H5T_NATIVE_SCHAR, buf);
- H5Sclose(space);
- H5Aclose(attr);
-
- dims[0] = 27;
- space = H5Screate_simple(1, dims, NULL);
- attr = H5Acreate (dataset, "attr2", H5T_STD_I8BE, space, H5P_DEFAULT);
- sprintf(buf, "2nd attribute of dset1.1.1");
- H5Awrite(attr, H5T_NATIVE_SCHAR, buf);
- H5Sclose(space);
- H5Aclose(attr);
-
- H5Dclose(dataset);
-
- /* dset1.1.2 */
- dims[0] = 20;
- space = H5Screate_simple(1, dims, NULL);
- dataset = H5Dcreate(group, "dset1.1.2", H5T_STD_I32BE, space, H5P_DEFAULT);
- for (i = 0; i < 20; i++)
- dset2[i] = i;
- H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset2);
- H5Sclose(space);
- H5Dclose(dataset);
-
- H5Gclose(group);
-
- /* soft link */
- group = H5Gopen (fid, "/g1/g1.2/g1.2.1");
- H5Glink (group, H5G_LINK_SOFT, "somevalue", "slink");
- H5Gclose(group);
-
- group = H5Gopen (fid, "/g2");
-
- /* dset2.1 */
- dims[0] = 10;
- space = H5Screate_simple(1, dims, NULL);
- dataset = H5Dcreate(group, "dset2.1", H5T_IEEE_F32BE, space, H5P_DEFAULT);
- for (i = 0; i < 10; i++)
- dset2_1[i] = (float)(i*0.1+1);
- H5Dwrite(dataset, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset2_1);
- H5Sclose(space);
- H5Dclose(dataset);
-
- /* dset2.2 */
- dims[0] = 3; dims[1] = 5;
- space = H5Screate_simple(2, dims, NULL);
- dataset = H5Dcreate(group, "dset2.2", H5T_IEEE_F32BE, space, H5P_DEFAULT);
- for (i = 0; i < 3; i++)
- for (j = 0; j < 5; j++)
- dset2_2[i][j] = (float)((i+1)*j*0.1);
- H5Dwrite(dataset, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset2_2);
- H5Sclose(space);
- H5Dclose(dataset);
-
- H5Gclose(group);
-
- H5Fclose(fid);
-
-}
-
-/*
- o
- /___\
- g1 o/ \o g2
- \___/
-
-
-o - group objects
-
-*/
-
-static void test_loop(void) {
-hid_t fid, group;
-
- fid = H5Fcreate(FILE10, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- group = H5Gcreate (fid, "/g1", 0);
- H5Gclose(group);
- group = H5Gcreate (fid, "/g2", 0);
- H5Gclose(group);
-
- H5Glink(fid, H5G_LINK_HARD, "/g2", "/g1/g1.1");
- H5Glink(fid, H5G_LINK_HARD, "/g1", "/g2/g2.1");
-
- H5Fclose(fid);
-}
-
-static void test_loop2(void) {
-hid_t fid, group;
-
- fid = H5Fcreate(FILE11, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- /* create group object g1 and implcit path from root object */
- group = H5Gcreate (fid, "/g1", 0);
- H5Gclose(group);
-
- /* create group object g2 and implcit path from root object */
- group = H5Gcreate (fid, "/g2", 0);
- H5Gclose(group);
-
- /* create path from object at /g1 to object at /g2 and name it g1.1 */
- H5Glink (fid, H5G_LINK_HARD, "/g2", "/g1/g1.1");
-
- /* create path from object at /g2 to object at /g1 and name it g2.1 */
- H5Glink (fid, H5G_LINK_SOFT, "/g1", "/g2/g2.1");
-
- H5Fclose(fid);
-
-}
-
-/*
- /
- | | | \ \ \
- g1 g2 g3 g4 g5 g6
- / \ | | \ \ \
- g1.1 g1.2 slink2 link3 dset2 slink4 dset3
- | | (g1) (dset2) (dset3)
- dset1 link1
- (dset1)
-*/
-
-static void test_many(void) {
- hid_t fid, group, attr, dataset, space, space2, type, create_plist, type2;
- hid_t array_dt;
- hsize_t dims[2];
- int data[2][2], dset2[10][10], dset3[10][10];
- double d[10];
-
- char buf[60];
- int i, j;
- int i0, i1, i2, i3;
- hsize_t sdim, maxdim;
-
- typedef struct { /* compound type has members with rank > 1 */
- int a[2][2][2][2]; /* arrays are 2x2x2x2 */
- double b[2][2][2][2];
- double c[2][2][2][2];
- } dset1_t;
- dset1_t dset1[6];
-
- hsize_t dim[4];
- int idx[4] = {0,1,2,3}; /* normal indicies */
- const int perm[4] = {0,1,2,3}; /* the 0'th and the 3'rd indices are permuted */
-
- fid = H5Fcreate(FILE12, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- group = H5Gcreate (fid, "/g1", 0);
- H5Gclose(group);
-
- create_plist = H5Pcreate(H5P_DATASET_CREATE);
-
- sdim = 2;
- H5Pset_chunk(create_plist, 1, &sdim);
-
- group = H5Gcreate (fid, "/g1/g1.1", 0);
-
- type = H5Tcreate (H5T_COMPOUND, sizeof(dset1[0]));
-
- dim[0] = dim[1] = dim[2] = dim[3] = 2;
- array_dt=H5Tarray_create(H5T_STD_I32BE,4,dim,perm);
- H5Tinsert(type, "a_array", HOFFSET(dset1_t, a), array_dt);
- H5Tclose(array_dt);
-
- array_dt=H5Tarray_create(H5T_IEEE_F64BE,4,dim,perm);
- H5Tinsert(type, "b_array", HOFFSET(dset1_t, b), array_dt);
- H5Tclose(array_dt);
-
- array_dt=H5Tarray_create(H5T_IEEE_F64BE,4,dim,perm);
- H5Tinsert(type, "c_array", HOFFSET(dset1_t, c), array_dt);
- H5Tclose(array_dt);
-
- type2 = H5Tcreate (H5T_COMPOUND, sizeof(dset1[0]));
-
- array_dt=H5Tarray_create(H5T_NATIVE_INT,4,dim,perm);
- H5Tinsert(type2, "a_array", HOFFSET(dset1_t, a), array_dt);
- H5Tclose(array_dt);
-
- array_dt=H5Tarray_create(H5T_NATIVE_DOUBLE,4,dim,perm);
- H5Tinsert(type2, "b_array", HOFFSET(dset1_t, b), array_dt);
- H5Tclose(array_dt);
-
- array_dt=H5Tarray_create(H5T_NATIVE_DOUBLE,4,dim,perm);
- H5Tinsert(type2, "c_array", HOFFSET(dset1_t, c), array_dt);
- H5Tclose(array_dt);
-
-
- /* dset1 */
- sdim = 6;
- maxdim = H5S_UNLIMITED;
- space = H5Screate_simple(1, &sdim, &maxdim);
- dataset = H5Dcreate(group, "dset1", type, space, create_plist);
-
- /* add attributes to dset1 */
- dims[0] = 10;
- space2 = H5Screate_simple(1, dims, NULL);
- attr = H5Acreate (dataset, "attr1", H5T_STD_I8BE, space2, H5P_DEFAULT);
- sprintf(buf, "abcdefghi");
- H5Awrite(attr, H5T_NATIVE_CHAR, buf);
- H5Sclose(space2);
- H5Aclose(attr);
-
- dims[0] = 2; dims[1] = 2;
- space2 = H5Screate_simple(2, dims, NULL);
- attr = H5Acreate (dataset, "attr2", H5T_STD_I32BE, space2, H5P_DEFAULT);
- data[0][0] = 0; data[0][1] = 1; data[1][0] = 2; data[1][1] = 3;
- H5Awrite(attr, H5T_NATIVE_INT, data);
- H5Sclose(space2);
- H5Aclose(attr);
-
- dims[0] = 10;
- space2 = H5Screate_simple(1, dims, NULL);
- attr = H5Acreate (dataset, "attr3", H5T_IEEE_F64BE, space2, H5P_DEFAULT);
- for (i = 0; i < 10; i++) d[i] = 0.1 * i;
- H5Awrite(attr, H5T_NATIVE_DOUBLE, d);
- H5Sclose(space2);
- H5Aclose(attr);
-
- for (j=0; j<(int)sdim; j++) {
- for (i3 = 0; i3 < 2; i3++) {
- idx[perm[3]] = i3;
- for (i2 = 0; i2 < 2; i2++) {
- idx[perm[2]] = i2;
- for (i1 = 0; i1 < 2; i1++) {
- idx[perm[1]] = i1;
- for (i0 = 0; i0 < 2; i0++) {
- idx[perm[0]] = i0;
-
- dset1[j].a[idx[3]][idx[2]][idx[1]][idx[0]] = i0+j;
- dset1[j].b[idx[3]][idx[2]][idx[1]][idx[0]] = (double)(i0+j);
-#ifdef WIN32
- dset1[j].c[idx[3]][idx[2]][idx[1]][idx[0]] = (double)(i0+j+(signed __int64)sdim);
-#else
- dset1[j].c[idx[3]][idx[2]][idx[1]][idx[0]] = (double)(i0+j+sdim);
-#endif
- }
- }
- }
- }
- }
-
- H5Dwrite(dataset, type2, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset1);
-
- H5Dclose(dataset);
- H5Sclose(space);
-
- H5Tclose(type);
- H5Tclose(type2);
- H5Gclose(group);
-
- group = H5Gcreate (fid, "/g1/g1.2", 0);
- H5Glink (group, H5G_LINK_HARD, "/g1/g1.1/dset1", "link1");
- H5Gclose(group);
-
- group = H5Gcreate (fid, "/g2", 0);
- H5Glink (group, H5G_LINK_SOFT, "/g1", "slink2");
- H5Gclose(group);
-
- group = H5Gcreate (fid, "/g3", 0);
- H5Gclose(group);
-
- group = H5Gcreate (fid, "/g4", 0);
-
- /* dset2 */
- dims[0] = 10; dims[1] = 10;
- space = H5Screate_simple(2, dims, NULL);
-
- dataset = H5Dcreate(group, "dset2", H5T_STD_I32BE, space, H5P_DEFAULT);
- for (i = 0; i < 10; i++)
- for (j = 0; j < 10; j++)
- dset2[i][j] = j;
- H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset2);
-
- H5Dclose(dataset);
-
- H5Sclose(space);
- H5Gclose(group);
-
- group = H5Gopen(fid, "/g3");
- H5Glink (group, H5G_LINK_HARD, "/g4/dset2", "link3");
- H5Gclose(group);
-
- group = H5Gcreate (fid, "/g5", 0);
- H5Gclose(group);
-
- group = H5Gcreate (fid, "/g6", 0);
- /* dset3 */
- dims[0] = 10; dims[1] = 10;
- space = H5Screate_simple(2, dims, NULL);
-
- dataset = H5Dcreate(group, "dset3", H5T_STD_I32BE, space, H5P_DEFAULT);
- for (i = 0; i < 10; i++)
- for (j = 0; j < 10; j++)
- dset3[i][j] = i;
- H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset3);
-
- H5Dclose(dataset);
-
- H5Sclose(space);
- H5Gclose(group);
-
- group = H5Gopen(fid, "/g5");
- H5Glink (group, H5G_LINK_SOFT, "/g6/dset3", "slink4");
- H5Gclose(group);
- H5Pclose(create_plist);
-
- H5Fclose(fid);
-
-}
-static hid_t mkstr(int size, H5T_str_t pad) {
-hid_t type;
-
- if ((type=H5Tcopy(H5T_C_S1))<0) return -1;
- if (H5Tset_size(type, (size_t)size)<0) return -1;
- if (H5Tset_strpad(type, pad)<0) return -1;
-
- return type;
-}
-
-static void test_str(void) {
- hid_t fid, dataset, space, f_type, m_type, str_type, f_type2;
- hid_t array_dt;
-
- hsize_t dims1[] = { 3, 4};
- char string1[12][2] = {"s1","s2","s3","s4","s5","s6","s7","s8","s9",
- "s0","s1","s2"};
-
- hsize_t dims2[]={20};
- char string2[20][9] = {"ab cd ef1", "ab cd ef2", "ab cd ef3", "ab cd ef4",
- "ab cd ef5", "ab cd ef6", "ab cd ef7", "ab cd ef8",
- "ab cd ef9", "ab cd ef0", "ab cd ef1", "ab cd ef2",
- "ab cd ef3", "ab cd ef4", "ab cd ef5", "ab cd ef6",
- "ab cd ef7", "ab cd ef8", "ab cd ef9", "ab cd ef0"};
-
- hsize_t dims3[] = { 27};
- char string3[27][5] = {"abcd0", "abcd1", "abcd2", "abcd3",
- "abcd4", "abcd5", "abcd6", "abcd7",
- "abcd8", "abcd9", "abcd0", "abcd1",
- "abcd2", "abcd3", "abcd4", "abcd5",
- "abcd6", "abcd7", "abcd8", "abcd9",
- "abcd0", "abcd1", "abcd2", "abcd3",
- "abcd4", "abcd5", "abcd6"};
-
- int i, j, k, l;
-
- hsize_t dims4[] = { 3 };
- char string4[3][20] = { "s1234567890123456789", "s1234567890123456789",
- "s1234567890123456789"};
-
- hsize_t dims5[] = { 3, 6};
- typedef struct {
- int a[8][10];
- char s[12][32];
- } compound_t;
- compound_t comp1[3][6];
- hsize_t mdims[2];
-
- fid = H5Fcreate(FILE13, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- /* string 1 : nullterm string */
- space = H5Screate_simple(2, dims1, NULL);
- f_type = mkstr(5, H5T_STR_NULLTERM);
- m_type = mkstr(2, H5T_STR_NULLTERM);
- dataset = H5Dcreate(fid, "/string1", f_type, space, H5P_DEFAULT);
- H5Dwrite(dataset, m_type, H5S_ALL, H5S_ALL, H5P_DEFAULT, string1);
- H5Tclose(m_type);
- H5Tclose(f_type);
- H5Sclose(space);
- H5Dclose(dataset);
-
- /* string 2 : space pad string */
- space = H5Screate_simple(1, dims2, NULL);
- f_type = mkstr(11, H5T_STR_SPACEPAD);
- m_type = mkstr(9, H5T_STR_NULLTERM);
- dataset = H5Dcreate(fid, "/string2", f_type, space, H5P_DEFAULT);
- H5Dwrite(dataset, m_type, H5S_ALL, H5S_ALL, H5P_DEFAULT, string2);
- H5Tclose(m_type);
- H5Tclose(f_type);
- H5Sclose(space);
- H5Dclose(dataset);
-
- /* string 3 : null pad string */
- space = H5Screate_simple(1, dims3, NULL);
- f_type = mkstr(8, H5T_STR_NULLPAD);
- m_type = mkstr(5, H5T_STR_NULLTERM);
- dataset = H5Dcreate(fid, "/string3", f_type, space, H5P_DEFAULT);
- H5Dwrite(dataset, m_type, H5S_ALL, H5S_ALL, H5P_DEFAULT, string3);
- H5Tclose(m_type);
- H5Tclose(f_type);
- H5Sclose(space);
- H5Dclose(dataset);
-
- /* string 4 : space pad long string */
- space = H5Screate_simple(1, dims4, NULL);
- f_type = mkstr(168, H5T_STR_SPACEPAD);
- m_type = mkstr(20, H5T_STR_NULLTERM);
- dataset = H5Dcreate(fid, "/string4", f_type, space, H5P_DEFAULT);
- H5Dwrite(dataset, m_type, H5S_ALL, H5S_ALL, H5P_DEFAULT, string4);
- H5Tclose(m_type);
- H5Tclose(f_type);
- H5Sclose(space);
- H5Dclose(dataset);
-
- /* compound data */
- space = H5Screate_simple(2, dims5, NULL);
- f_type = H5Tcreate (H5T_COMPOUND, sizeof(compound_t));
- f_type2 = H5Tcreate (H5T_COMPOUND, sizeof(compound_t));
-
- mdims[0] = 8; mdims[1] = 10;
-
- array_dt=H5Tarray_create(H5T_STD_I32BE,2,mdims,NULL);
- H5Tinsert(f_type, "int_array", HOFFSET(compound_t, a), array_dt);
- H5Tclose(array_dt);
-
- array_dt=H5Tarray_create(H5T_NATIVE_INT,2,mdims,NULL);
- H5Tinsert(f_type2, "int_array", HOFFSET(compound_t, a), array_dt);
- H5Tclose(array_dt);
-
- str_type = mkstr(32, H5T_STR_SPACEPAD);
- mdims[0] = 3; mdims[1] = 4;
-
- array_dt=H5Tarray_create(str_type,2,mdims,NULL);
- H5Tinsert(f_type, "string", HOFFSET(compound_t, s), array_dt);
- H5Tclose(array_dt);
-
- array_dt=H5Tarray_create(str_type,2,mdims,NULL);
- H5Tinsert(f_type2, "string", HOFFSET(compound_t, s), array_dt);
- H5Tclose(array_dt);
-
- for (i = 0; i < 3; i++)
- for (j = 0; j < 6; j++) {
- for (k = 0 ; k < 8; k++)
- for (l = 0; l < 10; l++)
- comp1[i][j].a[k][l] = (l+j+k) * (l+j+k);
- for (k = 0 ; k < 12; k++)
- sprintf(comp1[i][j].s[k], "abcdefgh12345678abcdefgh12345678");
- }
-
- dataset = H5Dcreate(fid, "/comp1", f_type, space, H5P_DEFAULT);
- H5Dwrite(dataset, f_type2, H5S_ALL, H5S_ALL, H5P_DEFAULT, comp1);
-
- H5Tclose(str_type);
- H5Tclose(f_type);
- H5Tclose(f_type2);
- H5Sclose(space);
- H5Dclose(dataset);
-
- H5Fclose(fid);
-}
-
-/*
- /
- / / | \ \ \
- g1 g2 g3 g4 g5 g6
- | | | | \ \
- string1 string3 string5
- string2 string4 string6
-*/
-
-static void test_str2(void)
-{
-hid_t fid, group, attr, dataset, space, space2, mem_space, hyper_space;
-hid_t fxdlenstr, fxdlenstr2, memtype;
-hsize_t dims[1], size[1], stride[1], count[1], block[1];
-hssize_t start[1];
-
-
-int i;
-char buf[LENSTR+10];
-char buf2[3*LENSTR2];
-hsize_t sdim;
-
- fid = H5Fcreate(FILE14, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- fxdlenstr = H5Tcopy(H5T_C_S1);
- H5Tset_size(fxdlenstr, LENSTR);
- H5Tset_cset(fxdlenstr, H5T_CSET_ASCII);
- H5Tset_strpad(fxdlenstr, H5T_STR_NULLTERM);
-
- memtype = H5Tcopy(H5T_C_S1);
- H5Tset_size(memtype, LENSTR);
- H5Tset_cset(memtype, H5T_CSET_ASCII);
- H5Tset_strpad(memtype, H5T_STR_NULLTERM);
-
- sdim = 10;
- size[0] = sdim;
- space = H5Screate_simple(1, size, NULL);
- size[0] = 1;
- mem_space = H5Screate_simple(1,size,NULL);
- hyper_space = H5Scopy(space);
-
- /* dset1 */
-
- group = H5Gcreate (fid, "/g1", 0);
- dataset = H5Dcreate(group, "dset1", fxdlenstr, space, H5P_DEFAULT);
-
- /* add attributes to dset1 */
-
- fxdlenstr2 = H5Tcopy(H5T_C_S1);
- H5Tset_size(fxdlenstr2, LENSTR2);
- H5Tset_cset(fxdlenstr2, H5T_CSET_ASCII);
- H5Tset_strpad(fxdlenstr2, H5T_STR_NULLTERM);
-
- dims[0] = 3;
- space2 = H5Screate_simple(1, dims, NULL);
- attr = H5Acreate (dataset, "attr1", fxdlenstr2, space2, H5P_DEFAULT);
- sprintf(&(buf2[0*LENSTR2]), "0123456789");
- sprintf(&(buf2[1*LENSTR2]), "abcdefghij");
- sprintf(&(buf2[2*LENSTR2]), "ABCDEFGHIJ");
- H5Awrite(attr, fxdlenstr2, buf2);
- H5Sclose(space2);
- H5Tclose(fxdlenstr2);
- H5Aclose(attr);
-
- stride[0]=1;
- count[0]=1;
- block[0]=1;
-
- for (i = 0; (hsize_t)i < sdim; i++) {
- start[0] = i;
- sprintf(buf,"This is row %1d of type H5T_STR_NULLTERM of",i);
- H5Tset_size(memtype, HDstrlen(buf)+1);
- H5Sselect_hyperslab(hyper_space, H5S_SELECT_SET, start, stride, count, block);
- H5Dwrite(dataset, memtype, mem_space, hyper_space, H5P_DEFAULT, buf);
- }
- H5Dclose(dataset);
- H5Gclose(group);
-
- group = H5Gcreate (fid, "/g2", 0);
- dataset = H5Dcreate(group, "dset2", fxdlenstr, space, H5P_DEFAULT);
-
- for (i = 0; (hsize_t)i < sdim; i++) {
- start[0] = i;
- sprintf(buf,"This is row %1d of type H5T_STR_NULLTERM of string array",i);
- H5Tset_size(memtype, HDstrlen(buf)+1);
- H5Sselect_hyperslab(hyper_space, H5S_SELECT_SET, start, stride, count, block);
- H5Dwrite(dataset, memtype, mem_space, hyper_space, H5P_DEFAULT, buf);
- }
- H5Dclose(dataset);
- H5Gclose(group);
-
-
- H5Tclose(fxdlenstr);
- fxdlenstr = H5Tcopy(H5T_C_S1);
- H5Tset_size(fxdlenstr, LENSTR);
- H5Tset_cset(fxdlenstr, H5T_CSET_ASCII);
- H5Tset_strpad(fxdlenstr, H5T_STR_NULLPAD);
-
- group = H5Gcreate (fid, "/g3", 0);
- dataset = H5Dcreate(group, "dset3", fxdlenstr, space, H5P_DEFAULT);
-
- for (i = 0;(hsize_t) i < sdim; i++) {
- start[0] = i;
- sprintf(buf,"This is row %1d of type H5T_STR_NULLPAD of",i);
- H5Tset_size(memtype, HDstrlen(buf)+1);
- H5Sselect_hyperslab(hyper_space, H5S_SELECT_SET, start, stride, count, block);
- H5Dwrite(dataset, memtype, mem_space, hyper_space, H5P_DEFAULT, buf);
- }
- H5Dclose(dataset);
- H5Gclose(group);
-
-
- group = H5Gcreate (fid, "/g4", 0);
- dataset = H5Dcreate(group, "dset4", fxdlenstr, space, H5P_DEFAULT);
-
- for (i = 0; (hsize_t)i < sdim; i++) {
- start[0] = i;
- sprintf(buf,"This is row %1d of type H5T_STR_NULLPAD of string array",i);
- H5Tset_size(memtype, HDstrlen(buf)+1);
- H5Sselect_hyperslab(hyper_space, H5S_SELECT_SET, start, stride, count, block);
- H5Dwrite(dataset, memtype, mem_space, hyper_space, H5P_DEFAULT, buf);
- }
- H5Dclose(dataset);
- H5Gclose(group);
-
- H5Tclose(fxdlenstr);
- fxdlenstr = H5Tcopy(H5T_C_S1);
- H5Tset_size(fxdlenstr, LENSTR);
- H5Tset_cset(fxdlenstr, H5T_CSET_ASCII);
- H5Tset_strpad(fxdlenstr, H5T_STR_SPACEPAD);
-
- group = H5Gcreate (fid, "/g5", 0);
- dataset = H5Dcreate(group, "dset5", fxdlenstr, space, H5P_DEFAULT);
-
- for (i = 0; (hsize_t)i < sdim; i++) {
- start[0] = i;
- sprintf(buf,"This is row %1d of type H5T_STR_SPACEPAD of",i);
- H5Tset_size(memtype, HDstrlen(buf)+1);
- H5Sselect_hyperslab(hyper_space, H5S_SELECT_SET, start, stride, count, block);
- H5Dwrite(dataset, memtype, mem_space, hyper_space, H5P_DEFAULT, buf);
- }
- H5Dclose(dataset);
- H5Gclose(group);
-
-
- group = H5Gcreate (fid, "/g6", 0);
- dataset = H5Dcreate(group, "dset6", fxdlenstr, space, H5P_DEFAULT);
-
- for (i = 0; (hsize_t)i < sdim; i++) {
- start[0] = i;
- sprintf(buf,"This is row %1d of type H5T_STR_SPACEPAD of string array",i);
- H5Tset_size(memtype, HDstrlen(buf)+1);
- H5Sselect_hyperslab(hyper_space, H5S_SELECT_SET, start, stride, count, block);
- H5Dwrite(dataset, memtype, mem_space, hyper_space, H5P_DEFAULT, buf);
- }
-
- H5Dclose(dataset);
- H5Tclose(fxdlenstr);
- H5Tclose(memtype);
- H5Sclose(mem_space);
- H5Sclose(hyper_space);
- H5Sclose(space);
- H5Fclose(fid);
-}
-
-static void test_enum(void)
-{
- /*some code is taken from enum.c in the test dir */
- hid_t file, type, space, dset;
- int val;
- enumtype data[] = {RED, GREEN, BLUE, GREEN, WHITE,
- WHITE, BLACK, GREEN, BLUE, RED,
- RED, BLUE, GREEN, BLACK, WHITE,
- RED, WHITE, GREEN, GREEN, BLUE};
- hsize_t size[1] = {NELMTS(data)};
-
- file = H5Fcreate(FILE15,H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
-
- type = H5Tcreate(H5T_ENUM, sizeof(enumtype));
- H5Tenum_insert(type, "RED", (val = 0, &val));
- H5Tenum_insert(type, "GREEN", (val = 1, &val));
- H5Tenum_insert(type, "BLUE", (val = 2, &val));
- H5Tenum_insert(type, "WHITE", (val = 3, &val));
- H5Tenum_insert(type, "BLACK", (val = 4, &val));
- H5Tcommit(file, "enum normal", type);
-
- space = H5Screate_simple(1,size,NULL);
- dset = H5Dcreate(file,"table",type, space, H5P_DEFAULT);
- H5Dwrite(dset,type,space,space,H5P_DEFAULT,data);
-
- H5Dclose(dset);
- H5Sclose(space);
- H5Fclose(file);
-}
-
-static void test_objref(void)
-{
-/*some code is taken from enum.c in the test dir */
- hid_t fid1; /* HDF5 File IDs */
- hid_t dataset; /* Dataset ID */
-
- hid_t group; /* Group ID */
- hid_t sid1; /* Dataspace ID */
- hid_t tid1; /* Datatype ID */
- hsize_t dims1[] = {SPACE1_DIM1};
- hobj_ref_t *wbuf, /* buffer to write to disk */
- *rbuf, /* buffer read from disk */
- *tbuf; /* temp. buffer read from disk */
- uint32_t *tu32; /* Temporary pointer to uint32 data */
- int i; /* counting variables */
- const char *write_comment="Foo!"; /* Comments for group */
-
- /* Allocate write & read buffers */
- wbuf=malloc(sizeof(hobj_ref_t)*SPACE1_DIM1);
- rbuf=malloc(sizeof(hobj_ref_t)*SPACE1_DIM1);
- tbuf=malloc(sizeof(hobj_ref_t)*SPACE1_DIM1);
-
- /* Create file */
- fid1 = H5Fcreate(FILE16, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- /* Create dataspace for datasets */
- sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL);
-
- /* Create a group */
- group=H5Gcreate(fid1,"Group1",(size_t)-1);
-
- /* Set group's comment */
- H5Gset_comment(group,".",write_comment);
-
- /* Create a dataset (inside Group1) */
- dataset=H5Dcreate(group,"Dataset1",H5T_STD_U32BE,sid1,H5P_DEFAULT);
-
- for(tu32=(uint32_t *)((void*)wbuf),i=0; i<SPACE1_DIM1; i++)
- *tu32++=i*3;
-
- /* Write selection to disk */
- H5Dwrite(dataset,H5T_NATIVE_UINT,H5S_ALL,H5S_ALL,H5P_DEFAULT,wbuf);
-
- /* Close Dataset */
- H5Dclose(dataset);
-
- /* Create another dataset (inside Group1) */
- dataset=H5Dcreate(group,"Dataset2",H5T_STD_U8BE,sid1,H5P_DEFAULT);
-
- /* Close Dataset */
- H5Dclose(dataset);
-
- /* Create a datatype to refer to */
- tid1 = H5Tcreate (H5T_COMPOUND, sizeof(s1_t));
-
- /* Insert fields */
- H5Tinsert (tid1, "a", HOFFSET(s1_t,a), H5T_STD_I32BE);
-
- H5Tinsert (tid1, "b", HOFFSET(s1_t,b), H5T_IEEE_F32BE);
-
- H5Tinsert (tid1, "c", HOFFSET(s1_t,c), H5T_IEEE_F32BE);
-
- /* Save datatype for later */
- H5Tcommit (group, "Datatype1", tid1);
-
- /* Close datatype */
- H5Tclose(tid1);
-
- /* Close group */
- H5Gclose(group);
-
- /* Create a dataset */
- dataset=H5Dcreate(fid1,"Dataset3",H5T_STD_REF_OBJ,sid1,H5P_DEFAULT);
-
- /* Create reference to dataset */
- H5Rcreate(&wbuf[0],fid1,"/Group1/Dataset1",H5R_OBJECT,-1);
-
- /* Create reference to dataset */
- H5Rcreate(&wbuf[1],fid1,"/Group1/Dataset2",H5R_OBJECT,-1);
-
- /* Create reference to group */
- H5Rcreate(&wbuf[2],fid1,"/Group1",H5R_OBJECT,-1);
-
- /* Create reference to named datatype */
- H5Rcreate(&wbuf[3],fid1,"/Group1/Datatype1",H5R_OBJECT,-1);
-
- /* Write selection to disk */
- H5Dwrite(dataset,H5T_STD_REF_OBJ,H5S_ALL,H5S_ALL,H5P_DEFAULT,wbuf);
-
- /* Close disk dataspace */
- H5Sclose(sid1);
-
- /* Close Dataset */
- H5Dclose(dataset);
-
- /* Close file */
- H5Fclose(fid1);
-
- /* Free memory buffers */
- free(wbuf);
- free(rbuf);
- free(tbuf);
-
-}
-
-static void test_datareg(void)
-{
- /*some code is taken from enum.c in the test dir */
-
- hid_t fid1; /* HDF5 File IDs */
- hid_t dset1, /* Dataset ID */
- dset2; /* Dereferenced dataset ID */
- hid_t sid1, /* Dataspace ID #1 */
- sid2; /* Dataspace ID #2 */
- hsize_t dims1[] = {SPACE1_DIM1},
- dims2[] = {SPACE2_DIM1, SPACE2_DIM2};
- hssize_t start[SPACE2_RANK]; /* Starting location of hyperslab */
- hsize_t stride[SPACE2_RANK]; /* Stride of hyperslab */
- hsize_t count[SPACE2_RANK]; /* Element count of hyperslab */
- hsize_t block[SPACE2_RANK]; /* Block size of hyperslab */
- hssize_t coord1[POINT1_NPOINTS][SPACE2_RANK]; /* Coordinates for point selection */
- hdset_reg_ref_t *wbuf, /* buffer to write to disk */
- *rbuf; /* buffer read from disk */
- uint8_t *dwbuf, /* Buffer for writing numeric data to disk */
- *drbuf; /* Buffer for reading numeric data from disk */
- uint8_t *tu8; /* Temporary pointer to uint8 data */
- int i; /* counting variables */
-
- /* Allocate write & read buffers */
- wbuf=calloc(sizeof(hdset_reg_ref_t), SPACE1_DIM1);
- rbuf=malloc(sizeof(hdset_reg_ref_t)*SPACE1_DIM1);
- dwbuf=malloc(sizeof(uint8_t)*SPACE2_DIM1*SPACE2_DIM2);
- drbuf=calloc(sizeof(uint8_t),SPACE2_DIM1*SPACE2_DIM2);
-
- /* Create file */
- fid1 = H5Fcreate(FILE17, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- /* Create dataspace for datasets */
- sid2 = H5Screate_simple(SPACE2_RANK, dims2, NULL);
-
- /* Create a dataset */
- dset2=H5Dcreate(fid1,"Dataset2",H5T_STD_U8BE,sid2,H5P_DEFAULT);
-
- for(tu8=dwbuf,i=0; i<SPACE2_DIM1*SPACE2_DIM2; i++)
- *tu8++=i*3;
-
- /* Write selection to disk */
- H5Dwrite(dset2,H5T_NATIVE_UCHAR,H5S_ALL,H5S_ALL,H5P_DEFAULT,dwbuf);
-
- /* Close Dataset */
- H5Dclose(dset2);
-
- /* Create dataspace for the reference dataset */
- sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL);
-
- /* Create a dataset */
- dset1=H5Dcreate(fid1,"Dataset1",H5T_STD_REF_DSETREG,sid1,H5P_DEFAULT);
-
- /* Create references */
-
- /* Select 6x6 hyperslab for first reference */
- start[0]=2; start[1]=2;
- stride[0]=1; stride[1]=1;
- count[0]=6; count[1]=6;
- block[0]=1; block[1]=1;
- H5Sselect_hyperslab(sid2,H5S_SELECT_SET,start,stride,count,block);
-
- H5Sget_select_npoints(sid2);
-
- /* Store first dataset region */
- H5Rcreate(&wbuf[0],fid1,"/Dataset2",H5R_DATASET_REGION,sid2);
-
- /* Select sequence of ten points for second reference */
- coord1[0][0]=6; coord1[0][1]=9;
- coord1[1][0]=2; coord1[1][1]=2;
- coord1[2][0]=8; coord1[2][1]=4;
- coord1[3][0]=1; coord1[3][1]=6;
- coord1[4][0]=2; coord1[4][1]=8;
- coord1[5][0]=3; coord1[5][1]=2;
- coord1[6][0]=0; coord1[6][1]=4;
- coord1[7][0]=9; coord1[7][1]=0;
- coord1[8][0]=7; coord1[8][1]=1;
- coord1[9][0]=3; coord1[9][1]=3;
- H5Sselect_elements(sid2,H5S_SELECT_SET,POINT1_NPOINTS,(const hssize_t **)coord1);
-
- H5Sget_select_npoints(sid2);
-
- /* Store second dataset region */
- H5Rcreate(&wbuf[1],fid1,"/Dataset2",H5R_DATASET_REGION,sid2);
-
- /* Write selection to disk */
- H5Dwrite(dset1,H5T_STD_REF_DSETREG,H5S_ALL,H5S_ALL,H5P_DEFAULT,wbuf);
-
- /* Close disk dataspace */
- H5Sclose(sid1);
-
- /* Close Dataset */
- H5Dclose(dset1);
-
- /* Close uint8 dataset dataspace */
- H5Sclose(sid2);
-
- /* Close file */
- H5Fclose(fid1);
-
- /* Free memory buffers */
- free(wbuf);
- free(rbuf);
- free(dwbuf);
- free(drbuf);
-}
-
-/*taken from Elena's compound test file*/
-static void test_nestcomp(void)
-{
- /* Compound memeber of the compound datatype*/
- typedef struct cmp_t {
- char a;
- float b[2];
- } cmp_t;
-
- /* First structure and dataset*/
- typedef struct s1_t {
- int a;
- float b;
- double c;
- cmp_t d;
- } s2_t;
- hid_t cmp_tid; /* Handle for the compound datatype */
- hid_t char_id; /* Handle for the string datatype */
- hid_t array_dt;
- hsize_t array_dims[] = {2}; /* Dataspace dimensions */
- int ndims = 1; /* Number of dimensions in the array field */
-
- s2_t s1[10];
- hid_t s2_tid; /* File datatype identifier */
-
- int i;
- hid_t file, dataset, space; /* Handles */
- herr_t status;
- hsize_t dim[] = {10}; /* Dataspace dimensions */
-
- char datasetname[] = "ArrayOfStructures";
-
-
- /*
- * Initialize the data
- */
- for (i = 0; i< 10; i++) {
- s1[i].a = i;
- s1[i].b = (float)(i*i);
- s1[i].c = 1./(i+1);
- s1[i].d.a = 65 + i;
- s1[i].d.b[0] = -100.;
- s1[i].d.b[1] = 100.;
- }
-
- /*
- * Create the data space.
- */
- space = H5Screate_simple(1, dim, NULL);
-
- /*
- * Create the file.
- */
- file = H5Fcreate(FILE18, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- /*
- * Create the memory data type.
- */
- /*
- * Create a datatype for compound field first.
- */
- cmp_tid = H5Tcreate (H5T_COMPOUND, sizeof(cmp_t));
-
- /* We are using C string of length one to represent "real" character */
- char_id = H5Tcopy(H5T_C_S1);
- H5Tset_strpad(char_id, H5T_STR_NULLTERM);
- H5Tinsert(cmp_tid, "char_name", HOFFSET(cmp_t, a), char_id);
-
- array_dt=H5Tarray_create(H5T_NATIVE_FLOAT,ndims,array_dims,NULL);
- H5Tinsert(cmp_tid, "array_name", HOFFSET(cmp_t, b), array_dt);
- H5Tclose(array_dt);
-
- s2_tid = H5Tcreate (H5T_COMPOUND, sizeof(s2_t));
- H5Tinsert(s2_tid, "a_name", HOFFSET(s2_t, a), H5T_NATIVE_INT);
- H5Tinsert(s2_tid, "c_name", HOFFSET(s2_t, c), H5T_NATIVE_DOUBLE);
- H5Tinsert(s2_tid, "b_name", HOFFSET(s2_t, b), H5T_NATIVE_FLOAT);
-
- /* Insert compound memeber created above */
- H5Tinsert(s2_tid, "d_name", HOFFSET(s2_t, d), cmp_tid);
-
- /*
- * Create the dataset.
- */
- dataset = H5Dcreate(file, datasetname, s2_tid, space, H5P_DEFAULT);
-
- /*
- * Wtite data to the dataset;
- */
- status = H5Dwrite(dataset, s2_tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, s1);
- if (status < 0)
- fprintf(stderr, "test_nestcomp H5Dwrite failed\n");
-
- /*
- * Release resources
- */
- H5Tclose(s2_tid);
- H5Tclose(cmp_tid);
- H5Tclose(char_id);
- H5Sclose(space);
- H5Dclose(dataset);
- H5Fclose(file);
-}
-
-static void test_opaque(void)
-{
- hid_t file, type, dataset, space;
- char test[100][2];
- int x;
- hsize_t dim = 2;
-
- for (x = 0; x < 100; x++){
- test[x][0] = x;
- test[x][1] = 99 - x;
- }
-
- /*
- * Create the data space.
- */
- space = H5Screate_simple(1, &dim, NULL);
-
- /*
- * Create the file.
- */
- file = H5Fcreate(FILE19, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- /*
- * Create the memory datatype.
- */
- type = H5Tcreate (H5T_OPAQUE, sizeof(char)*100*2);
- H5Tset_tag(type, "test opaque type");
-
- /*
- * Create the dataset.
- */
- dataset = H5Dcreate(file, "opaque test", type, space, H5P_DEFAULT);
-
- /*
- * Write data to the dataset;
- */
- H5Dwrite(dataset, type, H5S_ALL, H5S_ALL, H5P_DEFAULT, test);
-
- H5Tclose(type);
- H5Sclose(space);
- H5Dclose(dataset);
- H5Fclose(file);
-}
-
-static void test_bitfields(void)
-{
- hid_t file, grp=-1, type=-1, space=-1, dset=-1;
- size_t i;
- hsize_t nelmts;
- unsigned char buf[32];
-
- file = H5Fcreate(FILE20, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- if ((grp=H5Gcreate(file, "typetests", 0))<0) goto error;
-
- /* bitfield_1 */
- nelmts = sizeof(buf);
- if ((type=H5Tcopy(H5T_STD_B8LE))<0 ||
- (space=H5Screate_simple(1, &nelmts, NULL))<0 ||
- (dset=H5Dcreate(grp, "bitfield_1", type, space, H5P_DEFAULT))<0)
- goto error;
-
- for (i=0; i<sizeof buf; i++) buf[i] = (unsigned char)0xff ^ (unsigned char)i;
- if (H5Dwrite(dset, type, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf)<0)
- goto error;
- if (H5Sclose(space)<0) goto error;
- if (H5Tclose(type)<0) goto error;
- if (H5Dclose(dset)<0) goto error;
-
- /* bitfield_2 */
- nelmts = sizeof(buf)/2;
- if ((type=H5Tcopy(H5T_STD_B16LE))<0 ||
- (space=H5Screate_simple(1, &nelmts, NULL))<0 ||
- (dset=H5Dcreate(grp, "bitfield_2", type, space, H5P_DEFAULT))<0)
- goto error;
- for (i=0; i<sizeof buf; i++) buf[i] = (unsigned char)0xff ^ (unsigned char)i;
- if (H5Dwrite(dset, type, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf)<0)
- goto error;
- if (H5Sclose(space)<0) goto error;
- if (H5Tclose(type)<0) goto error;
- if (H5Dclose(dset)<0) goto error;
- if (H5Gclose(grp)<0) goto error;
- H5Fclose(file);
-
- error:
- H5E_BEGIN_TRY {
- H5Gclose(grp);
- H5Tclose(type);
- H5Sclose(space);
- H5Dclose(dset);
- } H5E_END_TRY;
-}
-
-static void test_vldatatypes(void)
-{
- hvl_t adata, wdata[SPACE1_DIM1];
- hid_t file, dset, space, type;
- hsize_t dims[] = { SPACE1_DIM1 };
- int i;
- herr_t ret=0;
-
- file = H5Fcreate(FILE21, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- /* Allocate and initialize VL dataset to write */
- for(i = 0; i < SPACE1_DIM1; i++) {
- int j;
-
- wdata[i].p = malloc((i + 1) * sizeof(int));
- wdata[i].len = i + 1;
-
- for (j = 0; j < i + 1; j++)
- ((int *)wdata[i].p)[j] = i * 10 + j;
- }
-
- /* write out the integers in little-endian format */
- space = H5Screate_simple(SPACE1_RANK, dims, NULL);
- type = H5Tvlen_create(H5T_NATIVE_INT);
- dset = H5Dcreate(file, "Dataset1.0", type, space, H5P_DEFAULT);
- ret = H5Dwrite(dset, type, H5S_ALL, H5S_ALL, H5P_DEFAULT, wdata);
- assert(ret>=0);
- ret = H5Dvlen_reclaim(type, space, H5P_DEFAULT, wdata);
- assert(ret>=0);
-
- ret = H5Dclose(dset);
- assert(ret>=0);
- ret = H5Tclose(type);
- assert(ret>=0);
- ret = H5Sclose(space);
- assert(ret>=0);
-
- /* Allocate and initialize VL dataset to write */
- for(i = 0; i < SPACE1_DIM1; i++) {
- int j;
-
- wdata[i].p = malloc((i + 1) * sizeof(float));
- wdata[i].len = i + 1;
-
- for (j = 0; j < i + 1; j++)
- ((float *)wdata[i].p)[j] = (float)(i * 10 + ((float)j) / 10.0);
- }
-
- /* write out the floats in little-endian format */
- space = H5Screate_simple(SPACE1_RANK, dims, NULL);
- type = H5Tvlen_create(H5T_NATIVE_FLOAT);
- dset = H5Dcreate(file, "Dataset2.0", type, space, H5P_DEFAULT);
- ret = H5Dwrite(dset, type, H5S_ALL, H5S_ALL, H5P_DEFAULT, wdata);
- assert(ret>=0);
- ret = H5Dvlen_reclaim(type, space, H5P_DEFAULT, wdata);
- assert(ret>=0);
-
- ret = H5Dclose(dset);
- assert(ret>=0);
- ret = H5Tclose(type);
- assert(ret>=0);
- ret = H5Sclose(space);
- assert(ret>=0);
-
- /* Allocate and initialize a scalar VL dataset to write */
- adata.p = malloc(37 * sizeof(int));
- adata.len = 37;
-
- for (i = 0; i < 37; i++)
- ((int *)adata.p)[i] = i * 2;
-
- /* write out scalar VL dataset in little-endian format */
- space = H5Screate_simple(0, NULL, NULL);
- type = H5Tvlen_create(H5T_NATIVE_INT);
- dset = H5Dcreate(file, "Dataset3.0", type, space, H5P_DEFAULT);
- ret = H5Dwrite(dset, type, H5S_ALL, H5S_ALL, H5P_DEFAULT, &adata);
- assert(ret>=0);
- ret = H5Dvlen_reclaim(type, space, H5P_DEFAULT, &adata);
- assert(ret>=0);
-
- ret = H5Dclose(dset);
- assert(ret>=0);
- ret = H5Tclose(type);
- assert(ret>=0);
- ret = H5Sclose(space);
- assert(ret>=0);
- ret = H5Fclose(file);
- assert(ret>=0);
-}
-
-static void test_vldatatypes2(void)
-{
- hvl_t wdata[SPACE1_DIM1]; /* Information to write */
- hvl_t *t1; /* Temporary pointer to VL information */
- hid_t fid1; /* HDF5 File IDs */
- hid_t dataset; /* Dataset ID */
- hid_t sid1; /* Dataspace ID */
- hid_t tid1, tid2; /* Datatype IDs */
- hsize_t dims1[] = {SPACE1_DIM1};
- unsigned i,j,k; /* counting variables */
- herr_t ret; /* Generic return value */
-
- /* Allocate and initialize VL data to write */
- for(i=0; i<SPACE1_DIM1; i++) {
- wdata[i].p=malloc((i+1)*sizeof(hvl_t));
- if(wdata[i].p==NULL) {
- printf("Cannot allocate memory for VL data! i=%u\n",i);
- return;
- } /* end if */
- wdata[i].len=i+1;
- for(t1=wdata[i].p,j=0; j<(i+1); j++, t1++) {
- t1->p=malloc((j+1)*sizeof(unsigned int));
- if(t1->p==NULL) {
- printf("Cannot allocate memory for VL data! i=%u, j=%u\n",i,j);
- return;
- } /* end if */
- t1->len=j+1;
- for(k=0; k<(j+1); k++)
- ((unsigned int *)t1->p)[k]=i*100+j*10+k;
- } /* end for */
- } /* end for */
-
- /* Create file */
- fid1 = H5Fcreate(FILE22, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- /* Create dataspace for datasets */
- sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL);
-
- /* Create a VL datatype to refer to */
- tid1 = H5Tvlen_create (H5T_NATIVE_UINT);
-
- /* Create the base VL type */
- tid2 = H5Tvlen_create (tid1);
-
- /* Create a dataset */
- dataset=H5Dcreate(fid1,"Dataset1",tid2,sid1,H5P_DEFAULT);
-
- /* Write dataset to disk */
- ret=H5Dwrite(dataset,tid2,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata);
- assert(ret>=0);
-
- /* Reclaim the write VL data */
- ret=H5Dvlen_reclaim(tid2,sid1,H5P_DEFAULT,wdata);
- assert(ret>=0);
-
- /* Close Dataset */
- ret = H5Dclose(dataset);
- assert(ret>=0);
- ret = H5Tclose(tid2);
- assert(ret>=0);
- ret = H5Tclose(tid1);
- assert(ret>=0);
- ret = H5Sclose(sid1);
- assert(ret>=0);
- ret = H5Fclose(fid1);
- assert(ret>=0);
-
-}
-
-static void test_vldatatypes3(void)
-{
- typedef struct { /* Struct that the VL sequences are composed of */
- int i;
- float f;
- hvl_t v;
- } s1;
- s1 wdata[SPACE1_DIM1]; /* Information to write */
- hid_t fid1; /* HDF5 File IDs */
- hid_t dataset; /* Dataset ID */
- hid_t sid1; /* Dataspace ID */
- hid_t tid1, tid2; /* Datatype IDs */
- hsize_t dims1[] = {SPACE1_DIM1};
- unsigned i,j; /* counting variables */
- herr_t ret; /* Generic return value */
-
- /* Allocate and initialize VL data to write */
- for(i=0; i<SPACE1_DIM1; i++) {
- wdata[i].i=i*10;
- wdata[i].f=(float)((i*20)/3.0);
- wdata[i].v.p=malloc((i+1)*sizeof(unsigned int));
- wdata[i].v.len=i+1;
- for(j=0; j<(i+1); j++)
- ((unsigned int *)wdata[i].v.p)[j]=i*10+j;
- } /* end for */
-
- /* Create file */
- fid1 = H5Fcreate(FILE23, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- /* Create dataspace for datasets */
- sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL);
-
- /* Create a VL datatype to refer to */
- tid1 = H5Tvlen_create (H5T_NATIVE_UINT);
-
- /* Create the base compound type */
- tid2 = H5Tcreate(H5T_COMPOUND, sizeof(s1));
-
- /* Insert fields */
- ret=H5Tinsert(tid2, "i", HOFFSET(s1, i), H5T_NATIVE_INT);
- assert(ret>=0);
- ret=H5Tinsert(tid2, "f", HOFFSET(s1, f), H5T_NATIVE_FLOAT);
- assert(ret>=0);
- ret=H5Tinsert(tid2, "v", HOFFSET(s1, v), tid1);
- assert(ret>=0);
-
- /* Create a dataset */
- dataset=H5Dcreate(fid1,"Dataset1",tid2,sid1,H5P_DEFAULT);
-
- /* Write dataset to disk */
- ret=H5Dwrite(dataset,tid2,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata);
- assert(ret>=0);
-
- /* Reclaim the write VL data */
- ret=H5Dvlen_reclaim(tid2,sid1,H5P_DEFAULT,wdata);
- assert(ret>=0);
-
- /* Close Dataset */
- ret = H5Dclose(dataset);
- assert(ret>=0);
- ret = H5Tclose(tid2);
- assert(ret>=0);
- ret = H5Tclose(tid1);
- assert(ret>=0);
- ret = H5Sclose(sid1);
- assert(ret>=0);
- ret = H5Fclose(fid1);
- assert(ret>=0);
-}
-
-static void test_vldatatypes4(void)
-{
- typedef struct { /* Struct that the VL sequences are composed of */
- int i;
- float f;
- } s1;
- hvl_t wdata[SPACE1_DIM1]; /* Information to write */
- hid_t fid1; /* HDF5 File IDs */
- hid_t dataset; /* Dataset ID */
- hid_t sid1; /* Dataspace ID */
- hid_t tid1, tid2; /* Datatype IDs */
- hsize_t dims1[] = {SPACE1_DIM1};
- unsigned i,j; /* counting variables */
- herr_t ret; /* Generic return value */
-
- /* Allocate and initialize VL data to write */
- for(i=0; i<SPACE1_DIM1; i++) {
- wdata[i].p=malloc((i+1)*sizeof(s1));
- wdata[i].len=i+1;
- for(j=0; j<(i+1); j++) {
- ((s1 *)wdata[i].p)[j].i=i*10+j;
- ((s1 *)wdata[i].p)[j].f=(float)((i*20+j)/3.0);
- } /* end for */
- } /* end for */
-
- /* Create file */
- fid1 = H5Fcreate(FILE24, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- /* Create dataspace for datasets */
- sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL);
-
- /* Create the base compound type */
- tid2 = H5Tcreate(H5T_COMPOUND, sizeof(s1));
-
- /* Insert fields */
- ret=H5Tinsert(tid2, "i", HOFFSET(s1, i), H5T_NATIVE_INT);
- assert(ret>=0);
- ret=H5Tinsert(tid2, "f", HOFFSET(s1, f), H5T_NATIVE_FLOAT);
- assert(ret>=0);
-
- /* Create a datatype to refer to */
- tid1 = H5Tvlen_create (tid2);
-
- /* Create a dataset */
- dataset=H5Dcreate(fid1,"Dataset1",tid1,sid1,H5P_DEFAULT);
-
- /* Write dataset to disk */
- ret=H5Dwrite(dataset,tid1,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata);
- assert(ret>=0);
-
- /* Reclaim the write VL data */
- ret=H5Dvlen_reclaim(tid1,sid1,H5P_DEFAULT,wdata);
- assert(ret>=0);
-
- /* Close Dataset */
- ret = H5Dclose(dataset);
- assert(ret>=0);
- ret = H5Tclose(tid1);
- assert(ret>=0);
- ret = H5Tclose(tid2);
- assert(ret>=0);
- ret = H5Sclose(sid1);
- assert(ret>=0);
- ret = H5Fclose(fid1);
- assert(ret>=0);
-}
-
-static void test_array1(void)
-{
- int wdata[SPACE1_DIM1][ARRAY1_DIM1]; /* Information to write */
- hid_t fid1; /* HDF5 File IDs */
- hid_t dataset; /* Dataset ID */
- hid_t sid1; /* Dataspace ID */
- hid_t tid1; /* Datatype ID */
- hsize_t sdims1[] = {SPACE1_DIM1};
- hsize_t tdims1[] = {ARRAY1_DIM1};
- int i,j; /* counting variables */
- herr_t ret; /* Generic return value */
-
- /* Allocate and initialize array data to write */
- for(i=0; i<SPACE1_DIM1; i++)
- for(j=0; j<ARRAY1_DIM1; j++)
- wdata[i][j]=i*10+j;
-
- /* Create file */
- fid1 = H5Fcreate(FILE25, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- /* Create dataspace for datasets */
- sid1 = H5Screate_simple(SPACE1_RANK, sdims1, NULL);
-
- /* Create a datatype to refer to */
- tid1 = H5Tarray_create (H5T_NATIVE_INT,ARRAY1_RANK,tdims1,NULL);
-
- /* Create a dataset */
- dataset=H5Dcreate(fid1,"Dataset1",tid1,sid1,H5P_DEFAULT);
-
- /* Write dataset to disk */
- ret=H5Dwrite(dataset,tid1,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata);
- assert(ret>=0);
-
- /* Close Dataset */
- ret = H5Dclose(dataset);
- assert(ret>=0);
- ret = H5Tclose(tid1);
- assert(ret>=0);
- ret = H5Sclose(sid1);
- assert(ret>=0);
- ret = H5Fclose(fid1);
- assert(ret>=0);
-}
-
-static void test_array2(void)
-{
- int wdata[SPACE1_DIM1][ARRAY2_DIM1][ARRAY2_DIM2][ARRAY2_DIM3]; /* Information to write */
- hid_t fid; /* HDF5 File IDs */
- hid_t dataset; /* Dataset ID */
- hid_t sid; /* Dataspace ID */
- hid_t tid; /* Datatype ID */
- hsize_t sdims1[] = {SPACE1_DIM1};
- hsize_t tdims2[] = {ARRAY2_DIM1,ARRAY2_DIM2,ARRAY2_DIM3};
- int i,j,k,l; /* counting variables */
- herr_t ret; /* Generic return value */
-
- /* Allocate and initialize array data to write */
- for(i=0; i<SPACE1_DIM1; i++)
- for(j=0; j<ARRAY2_DIM1; j++)
- for(k=0; k<ARRAY2_DIM2; k++)
- for(l=0; l<ARRAY2_DIM3; l++)
- wdata[i][j][k][l]=i*1000+j*100+k*10+l;
-
- /* Create file */
- fid = H5Fcreate(FILE26, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- /* Create dataspace for datasets */
- sid = H5Screate_simple(SPACE1_RANK, sdims1, NULL);
-
- /* Create a datatype to refer to */
- tid = H5Tarray_create (H5T_NATIVE_INT,ARRAY2_RANK,tdims2,NULL);
-
- /* Create a dataset */
- dataset=H5Dcreate(fid,"Dataset1",tid,sid,H5P_DEFAULT);
-
- /* Write dataset to disk */
- ret=H5Dwrite(dataset,tid,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata);
- assert(ret>=0);
-
- /* Close Dataset */
- ret = H5Dclose(dataset);
- assert(ret>=0);
- ret = H5Tclose(tid);
- assert(ret>=0);
- ret = H5Sclose(sid);
- assert(ret>=0);
- ret = H5Fclose(fid);
- assert(ret>=0);
-}
-
-static void test_array3(void)
-{
- int wdata[SPACE1_DIM1][ARRAY1_DIM1][ARRAY3_DIM1][ARRAY3_DIM2]; /* Information to write */
- hid_t fid; /* HDF5 File IDs */
- hid_t dataset; /* Dataset ID */
- hid_t sid; /* Dataspace ID */
- hid_t tid1; /* 1-D array Datatype ID */
- hid_t tid2; /* 2-D array Datatype ID */
- hsize_t sdims1[] = {SPACE1_DIM1};
- hsize_t tdims1[] = {ARRAY1_DIM1};
- hsize_t tdims2[] = {ARRAY3_DIM1,ARRAY3_DIM2};
- int i,j,k,l; /* counting variables */
- herr_t ret; /* Generic return value */
-
- /* Allocate and initialize array data to write */
- for(i=0; i<SPACE1_DIM1; i++)
- for(j=0; j<ARRAY1_DIM1; j++)
- for(k=0; k<ARRAY3_DIM1; k++)
- for(l=0; l<ARRAY3_DIM2; l++)
- wdata[i][j][k][l]=i*1000+j*100+k*10+l;
-
- /* Create file */
- fid = H5Fcreate(FILE27, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- /* Create dataspace for datasets */
- sid = H5Screate_simple(SPACE1_RANK, sdims1, NULL);
-
- /* Create a 2-D datatype to refer to */
- tid2 = H5Tarray_create (H5T_NATIVE_INT,ARRAY3_RANK,tdims2,NULL);
-
- /* Create a 1-D datatype to refer to */
- tid1 = H5Tarray_create (tid2,ARRAY1_RANK,tdims1,NULL);
-
- /* Create a dataset */
- dataset=H5Dcreate(fid,"Dataset1",tid1,sid,H5P_DEFAULT);
-
- /* Write dataset to disk */
- ret=H5Dwrite(dataset,tid1,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata);
- assert(ret>=0);
-
- /* Close Dataset */
- ret = H5Dclose(dataset);
- assert(ret>=0);
- ret = H5Tclose(tid1);
- assert(ret>=0);
- ret = H5Tclose(tid2);
- assert(ret>=0);
- ret = H5Sclose(sid);
- assert(ret>=0);
- ret = H5Fclose(fid);
- assert(ret>=0);
-}
-
-static void test_array4(void)
-{
- typedef struct { /* Typedef for compound datatype */
- int i;
- float f;
- } s2_t;
- s2_t wdata[SPACE1_DIM1][ARRAY1_DIM1]; /* Information to write */
- hid_t fid1; /* HDF5 File IDs */
- hid_t dataset; /* Dataset ID */
- hid_t sid1; /* Dataspace ID */
- hid_t tid1; /* Array Datatype ID */
- hid_t tid2; /* Compound Datatype ID */
- hsize_t sdims1[] = {SPACE1_DIM1};
- hsize_t tdims1[] = {ARRAY1_DIM1};
- int i,j; /* counting variables */
- herr_t ret; /* Generic return value */
-
- /* Initialize array data to write */
- for(i=0; i<SPACE1_DIM1; i++)
- for(j=0; j<ARRAY1_DIM1; j++) {
- wdata[i][j].i=i*10+j;
- wdata[i][j].f=(float)(i*2.5+j);
- } /* end for */
-
- /* Create file */
- fid1 = H5Fcreate(FILE28, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- /* Create dataspace for datasets */
- sid1 = H5Screate_simple(SPACE1_RANK, sdims1, NULL);
-
- /* Create a compound datatype to refer to */
- tid2 = H5Tcreate(H5T_COMPOUND, sizeof(s2_t));
-
- /* Insert integer field */
- ret = H5Tinsert (tid2, "i", HOFFSET(s2_t,i), H5T_NATIVE_INT);
- assert(ret>=0);
-
- /* Insert float field */
- ret = H5Tinsert (tid2, "f", HOFFSET(s2_t,f), H5T_NATIVE_FLOAT);
- assert(ret>=0);
-
- /* Create an array datatype to refer to */
- tid1 = H5Tarray_create (tid2,ARRAY1_RANK,tdims1,NULL);
-
- /* Close compound datatype */
- ret=H5Tclose(tid2);
- assert(ret>=0);
-
- /* Create a dataset */
- dataset=H5Dcreate(fid1,"Dataset1",tid1,sid1,H5P_DEFAULT);
-
- /* Write dataset to disk */
- ret=H5Dwrite(dataset,tid1,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata);
- assert(ret>=0);
-
- /* Close Dataset */
- ret = H5Dclose(dataset);
- assert(ret>=0);
- ret = H5Tclose(tid1);
- assert(ret>=0);
- ret = H5Sclose(sid1);
- assert(ret>=0);
- ret = H5Fclose(fid1);
- assert(ret>=0);
-}
-
-static void test_array5(void)
-{
- typedef struct { /* Typedef for compound datatype */
- int i;
- float f[ARRAY1_DIM1];
- } s2_t;
- s2_t wdata[SPACE1_DIM1][ARRAY1_DIM1]; /* Information to write */
- hid_t fid1; /* HDF5 File IDs */
- hid_t dataset; /* Dataset ID */
- hid_t sid1; /* Dataspace ID */
- hid_t tid1; /* Array Datatype ID */
- hid_t tid2; /* Compound Datatype ID */
- hid_t tid3; /* Nested Array Datatype ID */
- hsize_t sdims1[] = {SPACE1_DIM1};
- hsize_t tdims1[] = {ARRAY1_DIM1};
- int i,j,k; /* counting variables */
- herr_t ret; /* Generic return value */
-
- /* Initialize array data to write */
- for(i=0; i<SPACE1_DIM1; i++)
- for(j=0; j<ARRAY1_DIM1; j++) {
- wdata[i][j].i=i*10+j;
- for(k=0; k<ARRAY1_DIM1; k++)
- wdata[i][j].f[k]=(float)(i*10+j*2.5+k);
- } /* end for */
-
- /* Create file */
- fid1 = H5Fcreate(FILE29, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- /* Create dataspace for datasets */
- sid1 = H5Screate_simple(SPACE1_RANK, sdims1, NULL);
-
- /* Create a compound datatype to refer to */
- tid2 = H5Tcreate(H5T_COMPOUND, sizeof(s2_t));
-
- /* Insert integer field */
- ret = H5Tinsert (tid2, "i", HOFFSET(s2_t,i), H5T_NATIVE_INT);
- assert(ret>=0);
-
- /* Create an array of floats datatype */
- tid3 = H5Tarray_create (H5T_NATIVE_FLOAT,ARRAY1_RANK,tdims1,NULL);
-
- /* Insert float array field */
- ret = H5Tinsert (tid2, "f", HOFFSET(s2_t,f), tid3);
- assert(ret>=0);
-
- /* Close array of floats field datatype */
- ret=H5Tclose(tid3);
- assert(ret>=0);
-
- /* Create an array datatype to refer to */
- tid1 = H5Tarray_create (tid2,ARRAY1_RANK,tdims1,NULL);
-
- /* Close compound datatype */
- ret=H5Tclose(tid2);
- assert(ret>=0);
-
- /* Create a dataset */
- dataset=H5Dcreate(fid1,"Dataset1",tid1,sid1,H5P_DEFAULT);
-
- /* Write dataset to disk */
- ret=H5Dwrite(dataset,tid1,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata);
- assert(ret>=0);
-
- /* Close Dataset */
- ret = H5Dclose(dataset);
- assert(ret>=0);
- ret = H5Tclose(tid1);
- assert(ret>=0);
- ret = H5Sclose(sid1);
- assert(ret>=0);
- ret = H5Fclose(fid1);
- assert(ret>=0);
-}
-
-static void test_array6(void)
-{
- hvl_t wdata[SPACE1_DIM1][ARRAY1_DIM1]; /* Information to write */
- hid_t fid1; /* HDF5 File IDs */
- hid_t dataset; /* Dataset ID */
- hid_t sid1; /* Dataspace ID */
- hid_t tid1; /* Array Datatype ID */
- hid_t tid2; /* VL Datatype ID */
- hsize_t sdims1[] = {SPACE1_DIM1};
- hsize_t tdims1[] = {ARRAY1_DIM1};
- int i,j,k; /* counting variables */
- herr_t ret; /* Generic return value */
-
- /* Initialize array data to write */
- for(i=0; i<SPACE1_DIM1; i++)
- for(j=0; j<ARRAY1_DIM1; j++) {
- wdata[i][j].p=malloc((i+j+1)*sizeof(unsigned int));
- wdata[i][j].len=i+j+1;
- for(k=0; k<(i+j+1); k++)
- ((unsigned int *)wdata[i][j].p)[k]=i*100+j*10+k;
- } /* end for */
-
- /* Create file */
- fid1 = H5Fcreate(FILE30, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- /* Create dataspace for datasets */
- sid1 = H5Screate_simple(SPACE1_RANK, sdims1, NULL);
-
- /* Create a compound datatype to refer to */
- tid2 = H5Tvlen_create(H5T_NATIVE_UINT);
-
- /* Create an array datatype to refer to */
- tid1 = H5Tarray_create (tid2,ARRAY1_RANK,tdims1,NULL);
-
- /* Close VL datatype */
- ret=H5Tclose(tid2);
- assert(ret>=0);
-
- /* Create a dataset */
- dataset=H5Dcreate(fid1,"Dataset1",tid1,sid1,H5P_DEFAULT);
-
- /* Write dataset to disk */
- ret=H5Dwrite(dataset,tid1,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata);
- assert(ret>=0);
-
- /* Reclaim the write VL data */
- ret=H5Dvlen_reclaim(tid1,sid1,H5P_DEFAULT,wdata);
- assert(ret>=0);
-
- /* Close Dataset */
- ret = H5Dclose(dataset);
- assert(ret>=0);
- ret = H5Tclose(tid1);
- assert(ret>=0);
- ret = H5Sclose(sid1);
- assert(ret>=0);
- ret = H5Fclose(fid1);
- assert(ret>=0);
-}
-
-static void test_array7(void)
-{
- hvl_t wdata[SPACE1_DIM1][ARRAY1_DIM1]; /* Information to write */
- hid_t fid1; /* HDF5 File IDs */
- hid_t dataset; /* Dataset ID */
- hid_t sid1; /* Dataspace ID */
- hid_t tid1; /* Array Datatype ID */
- hid_t tid2; /* VL Datatype ID */
- hid_t tid3; /* Nested Array Datatype ID */
- hsize_t sdims1[] = {SPACE1_DIM1};
- hsize_t tdims1[] = {ARRAY1_DIM1};
- int i,j,k,l; /* Index variables */
- herr_t ret; /* Generic return value */
-
- /* Initialize array data to write */
- for(i=0; i<SPACE1_DIM1; i++)
- for(j=0; j<ARRAY1_DIM1; j++) {
- wdata[i][j].p=malloc((i+j+1)*(sizeof(unsigned int)*ARRAY1_DIM1));
- wdata[i][j].len=i+j+1;
- for(k=0; k<(i+j+1); k++)
- for(l=0; l<ARRAY1_DIM1; l++)
- ((unsigned int *)wdata[i][j].p)[k*ARRAY1_DIM1+l]=i*1000+j*100+k*10+l;
- } /* end for */
-
- /* Create file */
- fid1 = H5Fcreate(FILE31, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- /* Create dataspace for datasets */
- sid1 = H5Screate_simple(SPACE1_RANK, sdims1, NULL);
-
- /* Create the nested array datatype to refer to */
- tid3 = H5Tarray_create(H5T_NATIVE_UINT,ARRAY1_RANK,tdims1,NULL);
-
- /* Create a VL datatype of 1-D arrays to refer to */
- tid2 = H5Tvlen_create(tid3);
-
- /* Close nested array datatype */
- ret=H5Tclose(tid3);
- assert(ret>=0);
-
- /* Create an array datatype to refer to */
- tid1 = H5Tarray_create (tid2,ARRAY1_RANK,tdims1,NULL);
-
- /* Close VL datatype */
- ret=H5Tclose(tid2);
- assert(ret>=0);
-
- /* Create a dataset */
- dataset=H5Dcreate(fid1,"Dataset1",tid1,sid1,H5P_DEFAULT);
-
- /* Write dataset to disk */
- ret=H5Dwrite(dataset,tid1,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata);
- assert(ret>=0);
-
- /* Reclaim the write VL data */
- ret=H5Dvlen_reclaim(tid1,sid1,H5P_DEFAULT,wdata);
- assert(ret>=0);
-
- /* Close Dataset */
- ret = H5Dclose(dataset);
- assert(ret>=0);
- ret = H5Tclose(tid1);
- assert(ret>=0);
- ret = H5Sclose(sid1);
- assert(ret>=0);
- ret = H5Fclose(fid1);
- assert(ret>=0);
-}
-
-static void test_empty(void)
-{
- typedef struct {
- int a;
- float b;
- char c;
- } empty_struct;
- hid_t file, dset, space, type;
- hsize_t dims[] = { SPACE1_DIM1 };
- herr_t ret=0;
-
- file = H5Fcreate(FILE32, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- space = H5Screate_simple(SPACE1_RANK, dims, NULL);
-
- /* write out an empty vlen dataset */
- type = H5Tvlen_create(H5T_NATIVE_INT);
- dset = H5Dcreate(file, "Dataset1.0", type, space, H5P_DEFAULT);
- /* Don't write any data */
- ret = H5Dclose(dset);
- assert(ret>=0);
- ret = H5Tclose(type);
- assert(ret>=0);
-
- /* write out an empty native integer dataset dataset */
- dset = H5Dcreate(file, "Dataset2.0", H5T_NATIVE_INT, space, H5P_DEFAULT);
- /* Don't write any data */
- ret = H5Dclose(dset);
- assert(ret>=0);
-
- /* write out an empty native floating-point dataset dataset */
- dset = H5Dcreate(file, "Dataset3.0", H5T_NATIVE_FLOAT, space, H5P_DEFAULT);
- /* Don't write any data */
- ret = H5Dclose(dset);
- assert(ret>=0);
-
- /* write out an empty array dataset */
- type = H5Tarray_create(H5T_NATIVE_INT,SPACE1_RANK,dims,NULL);
- dset = H5Dcreate(file, "Dataset4.0", type, space, H5P_DEFAULT);
- /* Don't write any data */
- ret = H5Dclose(dset);
- assert(ret>=0);
- ret = H5Tclose(type);
- assert(ret>=0);
-
- /* write out an empty compound dataset */
- type = H5Tcreate(H5T_COMPOUND,sizeof(empty_struct));
- H5Tinsert(type, "a", HOFFSET(empty_struct, a),H5T_NATIVE_INT);
- H5Tinsert(type, "b", HOFFSET(empty_struct, b),H5T_NATIVE_FLOAT);
- H5Tinsert(type, "c", HOFFSET(empty_struct, c),H5T_NATIVE_CHAR);
- dset = H5Dcreate(file, "Dataset5.0", type, space, H5P_DEFAULT);
- /* Don't write any data */
- ret = H5Dclose(dset);
- assert(ret>=0);
- ret = H5Tclose(type);
- assert(ret>=0);
-
- ret = H5Sclose(space);
- assert(ret>=0);
-
- ret = H5Fclose(file);
- assert(ret>=0);
-}
-
-static void test_group_comments(void)
-{
- hid_t fid, group;
-
- fid = H5Fcreate(FILE33, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- /* / */
- group = H5Gcreate (fid, "/g1", 0);
- H5Gset_comment(group, "/g1", "Comment for group /g1");
- H5Gclose(group);
- group = H5Gcreate (fid, "/g2", 0);
- H5Gset_comment(group, "/g2", "Comment for group /g2");
- H5Gclose(group);
- group = H5Gcreate (fid, "/g3", 0);
- H5Gset_comment(group, "/g3", "Comment for group /g3");
- H5Gclose(group);
-
- /* /g1 */
- group = H5Gcreate (fid, "/g1/g1.1", 0);
- H5Gset_comment(group, "/g1/g1.1", "Comment for group /g1/g1.1");
- H5Gclose(group);
- group = H5Gcreate (fid, "/g1/g1.2", 0);
- H5Gset_comment(group, "/g1/g1.2", "Comment for group /g1/g1.2");
- H5Gclose(group);
-
- /* /g2 */
- group = H5Gcreate (fid, "/g2/g2.1", 0);
- H5Gset_comment(group, "/g2/g2.1", "Comment for group /g2/g2.1");
- H5Gclose(group);
-
- /* /g3 */
- group = H5Gcreate (fid, "/g3/g3.1", 0);
- H5Gset_comment(group, "/g3/g3.1", "Comment for group /g3/g3.1");
- H5Gclose(group);
- group = H5Gcreate (fid, "/g3/g3.2", 0);
- H5Gset_comment(group, "/g3/g3.2", "Comment for group /g3/g3.2");
- H5Gclose(group);
- group = H5Gcreate (fid, "/g3/g3.3", 0);
- H5Gset_comment(group, "/g3/g3.3", "Comment for group /g3/g3.3");
- H5Gclose(group);
- group = H5Gcreate (fid, "/g3/g3.4", 0);
- H5Gset_comment(group, "/g3/g3.4", "Comment for group /g3/g3.4");
- H5Gclose(group);
-
- /* /g2/g2.1 */
- group = H5Gcreate (fid, "/g2/g2.1/g2.1.1", 0);
- H5Gset_comment(group, "/g2/g2.1/g2.1.1", "Comment for group /g2/g2.1/g2.1.1");
- H5Gclose(group);
- group = H5Gcreate (fid, "/g2/g2.1/g2.1.2", 0);
- H5Gset_comment(group, "/g2/g2.1/g2.1.2", "Comment for group /g2/g2.1/g2.1.2");
- H5Gclose(group);
- group = H5Gcreate (fid, "/g2/g2.1/g2.1.3", 0);
- H5Gset_comment(group, "/g2/g2.1/g2.1.3", "Comment for group /g2/g2.1/g2.1.3");
- H5Gclose(group);
-
- H5Fclose(fid);
-}
-
-static
-void test_split_file(void)
-{
- hid_t fapl, fid, root, attr, space, dataset, atype;
- char meta[] = "this is some metadata on this file";
- hsize_t dims[2];
- int i, j, dset[10][15];
-
- fapl = H5Pcreate(H5P_FILE_ACCESS);
- H5Pset_fapl_split(fapl, "-m.h5", H5P_DEFAULT, "-r.h5", H5P_DEFAULT);
- fid = H5Fcreate(FILE34, H5F_ACC_TRUNC, H5P_DEFAULT, fapl);
- root = H5Gopen(fid, "/");
-
- atype = H5Tcopy(H5T_C_S1);
- H5Tset_size(atype, strlen(meta) + 1);
- H5Tset_strpad(atype, H5T_STR_NULLTERM);
-
- dims[0] = 1;
- space = H5Screate_simple(1, dims, NULL);
- attr = H5Acreate(root, "Metadata", atype, space, H5P_DEFAULT);
- H5Awrite(attr, atype, meta);
- H5Tclose(atype);
- H5Sclose(space);
- H5Aclose(attr);
-
- /* create dataset */
- dims[0] = 10;
- dims[1] = 15;
- space = H5Screate_simple(2, dims, NULL);
- dataset = H5Dcreate(fid, "/dset1", H5T_STD_I32BE, space, H5P_DEFAULT);
-
- for (i = 0; i < 10; i++)
- for (j = 0; j < 15; j++)
- dset[i][j] = i + j;
-
- H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset);
- H5Sclose(space);
- H5Dclose(dataset);
- H5Gclose(root);
- H5Fclose(fid);
- H5Pclose(fapl);
-}
-
-static
-void test_family(void)
-{
- hid_t fapl, fid, space, dataset;
- hsize_t dims[2];
- int i, j, dset[10][15];
-
-#define FAMILY_SIZE 256
-
- fapl = H5Pcreate(H5P_FILE_ACCESS);
- H5Pset_fapl_family(fapl, (hsize_t)FAMILY_SIZE, H5P_DEFAULT);
-
- fid = H5Fcreate(FILE35, H5F_ACC_TRUNC, H5P_DEFAULT, fapl);
-
- /* create dataset */
- dims[0] = 10;
- dims[1] = 15;
- space = H5Screate_simple(2, dims, NULL);
- dataset = H5Dcreate(fid, "/dset1", H5T_STD_I32BE, space, H5P_DEFAULT);
-
- for (i = 0; i < 10; i++)
- for (j = 0; j < 15; j++)
- dset[i][j] = i + j;
-
- H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset);
- H5Sclose(space);
- H5Dclose(dataset);
- H5Fclose(fid);
- H5Pclose(fapl);
-}
-
-static const char *multi_letters = "msbrglo";
-
-static
-void test_multi(void)
-{
- hid_t fapl, fid, space, dataset;
- hsize_t dims[2];
- int i, j, dset[10][15];
-
- /* Multi-file driver, general case of the split driver */
- H5FD_mem_t mt, memb_map[H5FD_MEM_NTYPES];
- hid_t memb_fapl[H5FD_MEM_NTYPES];
- const char *memb_name[H5FD_MEM_NTYPES];
- char sv[H5FD_MEM_NTYPES][1024];
- haddr_t memb_addr[H5FD_MEM_NTYPES];
-
- fapl = H5Pcreate(H5P_FILE_ACCESS);
-
- HDmemset(memb_map, 0, sizeof memb_map);
- HDmemset(memb_fapl, 0, sizeof memb_fapl);
- HDmemset(memb_name, 0, sizeof memb_name);
- HDmemset(memb_addr, 0, sizeof memb_addr);
-
- assert(HDstrlen(multi_letters) == H5FD_MEM_NTYPES);
-
- for (mt = H5FD_MEM_DEFAULT; mt < H5FD_MEM_NTYPES; ++mt) {
- memb_fapl[mt] = H5P_DEFAULT;
- sprintf(sv[mt], "%%s-%c.h5", multi_letters[mt]);
- memb_name[mt] = sv[mt];
- memb_addr[mt] = MAX(mt - 1,0) * (HADDR_MAX / 10);
- }
-
- H5Pset_fapl_multi(fapl, memb_map, memb_fapl, memb_name,
- memb_addr, FALSE);
-
- fid = H5Fcreate(FILE36, H5F_ACC_TRUNC, H5P_DEFAULT, fapl);
-
- /* create dataset */
- dims[0] = 10;
- dims[1] = 15;
- space = H5Screate_simple(2, dims, NULL);
- dataset = H5Dcreate(fid, "/dset1", H5T_STD_I32BE, space, H5P_DEFAULT);
-
- for (i = 0; i < 10; i++)
- for (j = 0; j < 15; j++)
- dset[i][j] = i + j;
-
- H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset);
- H5Sclose(space);
- H5Dclose(dataset);
- H5Fclose(fid);
- H5Pclose(fapl);
-}
-
-static void test_large_objname(void)
-{
- hid_t fid, group;
- char grp_name[128];
- register int i;
-
- fid = H5Fcreate(FILE37, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
-
- group = H5Gcreate(fid, "this_is_a_large_group_name", 0);
-
- for (i = 0; i < 50; ++i) {
- sprintf(grp_name, "this_is_a_large_group_name%d", i);
- group = H5Gcreate(group, grp_name, 0);
- }
-
- H5Gclose(group);
- H5Fclose(fid);
-}
-
-int main(void)
-{
- test_group();
- test_attribute();
- test_softlink();
- test_dataset();
- test_hardlink();
- test_compound_dt();
- test_all();
- test_loop();
-
- test_dataset2();
- test_compound_dt2();
- test_loop2();
- test_many();
-
- test_str();
- test_str2();
-
- test_enum();
-
- test_objref();
- test_datareg();
-
- test_nestcomp();
-
- test_opaque();
-
- test_bitfields();
-
- test_vldatatypes();
- test_vldatatypes2();
- test_vldatatypes3();
- test_vldatatypes4();
-
- test_array1();
- test_array2();
- test_array3();
- test_array4();
- test_array5();
- test_array6();
- test_array7();
-
- test_empty();
- test_group_comments();
- test_split_file();
- test_family();
- test_multi();
-
- test_large_objname();
-
- return 0;
-}
generated by cgit v0.12 at 2024-11-14 06:59:28 (GMT)