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author | Mohamad Chaarawi <chaarawi@hdfgroup.org> | 2015-04-03 21:41:28 (GMT) |
---|---|---|
committer | Mohamad Chaarawi <chaarawi@hdfgroup.org> | 2015-04-03 21:41:28 (GMT) |
commit | 5630846ea34f29b45aecdb431f846327c4fde9e1 (patch) | |
tree | 83e65a0feb757f39472e70d2168048d091cfed50 /tools/h5dump | |
parent | 820b4dc39136072bccad1455fc0232ec9e710d58 (diff) | |
parent | b9e5e2af4e31b0a60c2d2f6421fb1b3cb9aa0564 (diff) | |
download | hdf5-5630846ea34f29b45aecdb431f846327c4fde9e1.zip hdf5-5630846ea34f29b45aecdb431f846327c4fde9e1.tar.gz hdf5-5630846ea34f29b45aecdb431f846327c4fde9e1.tar.bz2 |
[svn-r26724] - merge from trunk & fix conflicts.
- fix bug in opending an already open named datatype.
- fix dynamically loaded VOL plugin support with new changes coming in.
Diffstat (limited to 'tools/h5dump')
-rw-r--r-- | tools/h5dump/CMakeLists.txt | 8 | ||||
-rw-r--r-- | tools/h5dump/CMakeTests.cmake | 23 | ||||
-rw-r--r-- | tools/h5dump/CMakeTestsXML.cmake | 8 | ||||
-rw-r--r-- | tools/h5dump/Makefile.in | 17 | ||||
-rw-r--r-- | tools/h5dump/binread.c | 66 | ||||
-rw-r--r-- | tools/h5dump/errfiles/tarray1_big.err | 54 | ||||
-rw-r--r-- | tools/h5dump/errfiles/tattrregR.err | 36 | ||||
-rw-r--r-- | tools/h5dump/errfiles/tdataregR.err | 36 | ||||
-rw-r--r-- | tools/h5dump/h5dump_xml.c | 2 | ||||
-rw-r--r-- | tools/h5dump/h5dumpgentest.c | 92 | ||||
-rw-r--r-- | tools/h5dump/testh5dump.sh.in | 26 | ||||
-rw-r--r-- | tools/h5dump/testh5dumppbits.sh.in | 4 | ||||
-rw-r--r-- | tools/h5dump/testh5dumpxml.sh.in | 12 |
13 files changed, 127 insertions, 257 deletions
diff --git a/tools/h5dump/CMakeLists.txt b/tools/h5dump/CMakeLists.txt index 584222e..7658c04 100644 --- a/tools/h5dump/CMakeLists.txt +++ b/tools/h5dump/CMakeLists.txt @@ -1,4 +1,4 @@ -cmake_minimum_required (VERSION 2.8.11) +cmake_minimum_required (VERSION 3.1.0) PROJECT (HDF5_TOOLS_H5DUMP) #----------------------------------------------------------------------------- @@ -15,7 +15,7 @@ add_executable (h5dump ${HDF5_TOOLS_H5DUMP_SOURCE_DIR}/h5dump_xml.c ) TARGET_NAMING (h5dump ${LIB_TYPE}) -TARGET_C_PROPERTIES (h5dump " " " ") +TARGET_C_PROPERTIES (h5dump ${LIB_TYPE} " " " ") target_link_libraries (h5dump ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) set_target_properties (h5dump PROPERTIES FOLDER tools) @@ -27,8 +27,8 @@ if (BUILD_TESTING) # -------------------------------------------------------------------- if (HDF5_BUILD_GENERATORS AND NOT BUILD_SHARED_LIBS) add_executable (h5dumpgentest ${HDF5_TOOLS_H5DUMP_SOURCE_DIR}/h5dumpgentest.c) - TARGET_NAMING (h5dumpgentest ${LIB_TYPE}) - TARGET_C_PROPERTIES (h5dumpgentest " " " ") + TARGET_NAMING (h5dumpgentest STATIC) + TARGET_C_PROPERTIES (h5dumpgentest STATIC " " " ") target_link_libraries (h5dumpgentest ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET}) set_target_properties (h5dumpgentest PROPERTIES FOLDER generator/tools) diff --git a/tools/h5dump/CMakeTests.cmake b/tools/h5dump/CMakeTests.cmake index afb482e..3565b0f 100644 --- a/tools/h5dump/CMakeTests.cmake +++ b/tools/h5dump/CMakeTests.cmake @@ -66,6 +66,7 @@ ${HDF5_TOOLS_SRC_DIR}/testfiles/tcomp-3.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/tcomp-4.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/tcompact.ddl + ${HDF5_TOOLS_SRC_DIR}/testfiles/tcompound_enum.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/tcontents.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/tcontiguos.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/tdatareg.ddl @@ -215,6 +216,7 @@ ${HDF5_TOOLS_SRC_DIR}/testfiles/tcmpdintsize.h5 ${HDF5_TOOLS_SRC_DIR}/testfiles/tcompound.h5 ${HDF5_TOOLS_SRC_DIR}/testfiles/tcompound_complex.h5 + ${HDF5_TOOLS_SRC_DIR}/testfiles/tcompound_enum.h5 ${HDF5_TOOLS_SRC_DIR}/testfiles/tdatareg.h5 ${HDF5_TOOLS_SRC_DIR}/testfiles/tdset.h5 ${HDF5_TOOLS_SRC_DIR}/testfiles/tempty.h5 @@ -1157,6 +1159,7 @@ #test for the nested compound type ADD_H5_TEST (tnestcomp-1 0 --enable-error-stack tnestedcomp.h5) ADD_H5_TEST (tnestedcmpddt 0 --enable-error-stack tnestedcmpddt.h5) + #ADD_H5_TEST (tcompound_enum 0 --enable-error-stack tcompound_enum.h5) # test for options ADD_H5ERR_MASK_TEST (tall-1 0 --enable-error-stack tall.h5) @@ -1340,30 +1343,14 @@ set (USE_FILTER_SZIP "true") endif (H5_HAVE_FILTER_SZIP) - if (H5_HAVE_FILTER_SHUFFLE) - set (USE_FILTER_SHUFFLE "true") - endif (H5_HAVE_FILTER_SHUFFLE) - - if (H5_HAVE_FILTER_FLETCHER32) - set (USE_FILTER_FLETCHER32 "true") - endif (H5_HAVE_FILTER_FLETCHER32) - - if (H5_HAVE_FILTER_NBIT) - set (USE_FILTER_NBIT "true") - endif (H5_HAVE_FILTER_NBIT) - - if (H5_HAVE_FILTER_SCALEOFFSET) - set (USE_FILTER_SCALEOFFSET "true") - endif (H5_HAVE_FILTER_SCALEOFFSET) - - if (USE_FILTER_DEFLATE AND USE_FILTER_SHUFFLE AND USE_FILTER_FLETCHER32 AND USE_FILTER_NBIT AND USE_FILTER_SCALEOFFSET) + if (USE_FILTER_DEFLATE) # data read internal filters ADD_H5_TEST (treadintfilter 0 --enable-error-stack -d deflate -d shuffle -d fletcher32 -d nbit -d scaleoffset tfilters.h5) if (HDF5_ENABLE_SZIP_SUPPORT) # data read all filters ADD_H5_TEST (treadfilter 0 --enable-error-stack -d all -d szip tfilters.h5) endif (HDF5_ENABLE_SZIP_SUPPORT) - endif (USE_FILTER_DEFLATE AND USE_FILTER_SHUFFLE AND USE_FILTER_FLETCHER32 AND USE_FILTER_NBIT AND USE_FILTER_SCALEOFFSET) + endif (USE_FILTER_DEFLATE) # test for displaying objects with very long names ADD_H5_TEST (tlonglinks 0 --enable-error-stack tlonglinks.h5) diff --git a/tools/h5dump/CMakeTestsXML.cmake b/tools/h5dump/CMakeTestsXML.cmake index a939d78..0a667c4 100644 --- a/tools/h5dump/CMakeTestsXML.cmake +++ b/tools/h5dump/CMakeTestsXML.cmake @@ -411,14 +411,6 @@ ADD_XML_H5_TEST (tempty-dtd.h5 0 --use-dtd tempty.h5) ADD_XML_H5_TEST (tempty-dtd-2.h5 0 -u tempty.h5) - # The lone colon here confuses some systems (Cray X1). Skip - # it if configure detects that this is a problem. - set (TESTTYPE "TEST") - if (NOT ${H5_LONE_COLON}) - set (TESTTYPE "SKIP") - endif (NOT ${H5_LONE_COLON}) - ADD_XML_SKIP_H5_TEST (tempty-nons.h5 0 ${TESTTYPE} -X : tempty.h5) - ADD_XML_H5_TEST (tempty-nons-2.h5 0 --xml-ns=: tempty.h5) ## Some of these combinations are syntactically correct but diff --git a/tools/h5dump/Makefile.in b/tools/h5dump/Makefile.in index 365230d..fdafacf 100644 --- a/tools/h5dump/Makefile.in +++ b/tools/h5dump/Makefile.in @@ -106,7 +106,8 @@ bin_PROGRAMS = h5dump$(EXEEXT) TESTS = $(am__EXEEXT_1) $(TEST_SCRIPT) subdir = tools/h5dump ACLOCAL_M4 = $(top_srcdir)/aclocal.m4 -am__aclocal_m4_deps = $(top_srcdir)/configure.ac +am__aclocal_m4_deps = $(top_srcdir)/m4/aclocal_cxx.m4 \ + $(top_srcdir)/m4/aclocal_fc.m4 $(top_srcdir)/configure.ac am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \ $(ACLOCAL_M4) mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs @@ -419,7 +420,6 @@ AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@ AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@ AM_MAKEFLAGS = @AM_MAKEFLAGS@ AR = @AR@ -AS = @AS@ AUTOCONF = @AUTOCONF@ AUTOHEADER = @AUTOHEADER@ AUTOMAKE = @AUTOMAKE@ @@ -451,7 +451,6 @@ DIRECT_VFD = @DIRECT_VFD@ DLLTOOL = @DLLTOOL@ DSYMUTIL = @DSYMUTIL@ DUMPBIN = @DUMPBIN@ -DYNAMIC_DIRS = @DYNAMIC_DIRS@ ECHO_C = @ECHO_C@ ECHO_N = @ECHO_N@ ECHO_T = @ECHO_T@ @@ -470,17 +469,14 @@ FCFLAGS_f90 = @FCFLAGS_f90@ FCLIBS = @FCLIBS@ FC_VERSION = @FC_VERSION@ FGREP = @FGREP@ -FILTERS = @FILTERS@ FSEARCH_DIRS = @FSEARCH_DIRS@ GREP = @GREP@ H5_CFLAGS = @H5_CFLAGS@ H5_CPPFLAGS = @H5_CPPFLAGS@ H5_CXXFLAGS = @H5_CXXFLAGS@ -H5_CXX_SHARED = @H5_CXX_SHARED@ H5_FCFLAGS = @H5_FCFLAGS@ H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@ H5_LDFLAGS = @H5_LDFLAGS@ -H5_LONE_COLON = @H5_LONE_COLON@ H5_VERSION = @H5_VERSION@ HADDR_T = @HADDR_T@ HAVE_DMALLOC = @HAVE_DMALLOC@ @@ -543,7 +539,6 @@ R_INTEGER = @R_INTEGER@ R_LARGE = @R_LARGE@ SEARCH = @SEARCH@ SED = @SED@ -SETX = @SETX@ SET_MAKE = @SET_MAKE@ SHELL = @SHELL@ SIZE_T = @SIZE_T@ @@ -558,10 +553,6 @@ TR = @TR@ TRACE_API = @TRACE_API@ UNAME_INFO = @UNAME_INFO@ USE_FILTER_DEFLATE = @USE_FILTER_DEFLATE@ -USE_FILTER_FLETCHER32 = @USE_FILTER_FLETCHER32@ -USE_FILTER_NBIT = @USE_FILTER_NBIT@ -USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@ -USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@ USE_FILTER_SZIP = @USE_FILTER_SZIP@ USINGMEMCHECKER = @USINGMEMCHECKER@ VERSION = @VERSION@ @@ -675,11 +666,11 @@ TRACE = perl $(top_srcdir)/bin/trace # .chkexe files are used to mark tests that have run successfully. # .chklog files are output from those tests. -# *.clog are from the MPE option. +# *.clog and *.clog2 are from the MPE option. # Temporary files. *.h5 are generated by h5dumpgentest. They should # copied to the testfiles/ directory if update is required. -CHECK_CLEANFILES = *.chkexe *.chklog *.clog *.h5 *.bin +CHECK_CLEANFILES = *.chkexe *.chklog *.clog *.clog2 *.h5 *.bin # Test programs and scripts TEST_PROG = h5dumpgentest diff --git a/tools/h5dump/binread.c b/tools/h5dump/binread.c index 5abb9af..74db92c 100644 --- a/tools/h5dump/binread.c +++ b/tools/h5dump/binread.c @@ -49,8 +49,7 @@ static void usage (void) { - fprintf(stderr, "\ - usage: binread FILE_NAME\n"); + fprintf(stderr, "usage: binread FILE_NAME\n"); } /*------------------------------------------------------------------------- @@ -64,38 +63,35 @@ usage (void) int main (int argc, const char *argv[]) { - FILE *stream; - int numread; - TYPE buf[NELMTS]; - size_t i, nelmts = NELMTS; - char *fname=NULL; - - if (argc != 2) - { - usage(); - exit(1); - } - - fname = strdup(argv[1]); - - if( (stream = fopen(fname, "rb" )) != NULL ) - { - numread = fread( buf, sizeof( TYPE ), nelmts, stream ); - printf( "Number of items read = %d\n", numread ); - - for (i = 0; i < nelmts; i++) - { - printf(FORMAT,buf[i]); - } - printf("\n"); - - fclose( stream ); - } - else - printf( "File %s could not be opened\n",fname ); - - free(fname); - - return 0; + FILE *stream; + size_t numread; + TYPE buf[NELMTS]; + size_t i, nelmts = NELMTS; + char *fname=NULL; + + if (argc != 2) { + usage(); + exit(1); + } + + fname = strdup(argv[1]); + + if((stream = fopen(fname, "rb")) != NULL) { + numread = fread(buf, sizeof( TYPE ), nelmts, stream); + printf("Number of items read = %llu\n", (unsigned long long)numread); + + for (i = 0; i < nelmts; i++) { + printf(FORMAT,buf[i]); + } + printf("\n"); + + fclose(stream); + } + else + printf("File %s could not be opened\n", fname); + + free(fname); + + return 0; } diff --git a/tools/h5dump/errfiles/tarray1_big.err b/tools/h5dump/errfiles/tarray1_big.err index 5b11b7b..0691f0b 100644 --- a/tools/h5dump/errfiles/tarray1_big.err +++ b/tools/h5dump/errfiles/tarray1_big.err @@ -8,21 +8,9 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #002: (file name) line (number) in H5VL_native_object_open(): unable to dereference object major: References minor: Unable to initialize object - #003: (file name) line (number) in H5R_dereference(): Unable to read dataset region information - major: References - minor: Read failed - #004: (file name) line (number) in H5HG_read(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #005: (file name) line (number) in H5HG_protect(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #006: (file name) line (number) in H5AC_protect(): H5C_protect() failed. - major: Object cache - minor: Unable to protect metadata - #007: (file name) line (number) in H5C_protect(): incorrect cache entry type - major: Object cache - minor: Inappropriate type + #003: (file name) line (number) in H5R_dereference(): Undefined reference pointer + major: Invalid arguments to routine + minor: Bad value HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Rdereference2(): unable to dereference object major: References @@ -33,21 +21,9 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #002: (file name) line (number) in H5VL_native_object_open(): unable to dereference object major: References minor: Unable to initialize object - #003: (file name) line (number) in H5R_dereference(): Unable to read dataset region information - major: References - minor: Read failed - #004: (file name) line (number) in H5HG_read(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #005: (file name) line (number) in H5HG_protect(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #006: (file name) line (number) in H5AC_protect(): H5C_protect() failed. - major: Object cache - minor: Unable to protect metadata - #007: (file name) line (number) in H5C_protect(): incorrect cache entry type - major: Object cache - minor: Inappropriate type + #003: (file name) line (number) in H5R_dereference(): Undefined reference pointer + major: Invalid arguments to routine + minor: Bad value HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Rdereference2(): unable to dereference object major: References @@ -58,21 +34,9 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #002: (file name) line (number) in H5VL_native_object_open(): unable to dereference object major: References minor: Unable to initialize object - #003: (file name) line (number) in H5R_dereference(): Unable to read dataset region information - major: References - minor: Read failed - #004: (file name) line (number) in H5HG_read(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #005: (file name) line (number) in H5HG_protect(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #006: (file name) line (number) in H5AC_protect(): H5C_protect() failed. - major: Object cache - minor: Unable to protect metadata - #007: (file name) line (number) in H5C_protect(): incorrect cache entry type - major: Object cache - minor: Inappropriate type + #003: (file name) line (number) in H5R_dereference(): Undefined reference pointer + major: Invalid arguments to routine + minor: Bad value H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): #000: (file name) line (number) in h5tools_dump_simple_data(): H5Rdereference failed major: Failure in tools library diff --git a/tools/h5dump/errfiles/tattrregR.err b/tools/h5dump/errfiles/tattrregR.err index 65e38a1..e57fef1 100644 --- a/tools/h5dump/errfiles/tattrregR.err +++ b/tools/h5dump/errfiles/tattrregR.err @@ -8,21 +8,9 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #002: (file name) line (number) in H5VL_native_object_open(): unable to dereference object major: References minor: Unable to initialize object - #003: (file name) line (number) in H5R_dereference(): Unable to read dataset region information - major: References - minor: Read failed - #004: (file name) line (number) in H5HG_read(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #005: (file name) line (number) in H5HG_protect(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #006: (file name) line (number) in H5AC_protect(): H5C_protect() failed. - major: Object cache - minor: Unable to protect metadata - #007: (file name) line (number) in H5C_protect(): incorrect cache entry type - major: Object cache - minor: Inappropriate type + #003: (file name) line (number) in H5R_dereference(): Undefined reference pointer + major: Invalid arguments to routine + minor: Bad value HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Rdereference2(): unable to dereference object major: References @@ -33,21 +21,9 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #002: (file name) line (number) in H5VL_native_object_open(): unable to dereference object major: References minor: Unable to initialize object - #003: (file name) line (number) in H5R_dereference(): Unable to read dataset region information - major: References - minor: Read failed - #004: (file name) line (number) in H5HG_read(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #005: (file name) line (number) in H5HG_protect(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #006: (file name) line (number) in H5AC_protect(): H5C_protect() failed. - major: Object cache - minor: Unable to protect metadata - #007: (file name) line (number) in H5C_protect(): incorrect cache entry type - major: Object cache - minor: Inappropriate type + #003: (file name) line (number) in H5R_dereference(): Undefined reference pointer + major: Invalid arguments to routine + minor: Bad value H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): #000: (file name) line (number) in h5tools_dump_simple_data(): H5Rdereference failed major: Failure in tools library diff --git a/tools/h5dump/errfiles/tdataregR.err b/tools/h5dump/errfiles/tdataregR.err index 65e38a1..e57fef1 100644 --- a/tools/h5dump/errfiles/tdataregR.err +++ b/tools/h5dump/errfiles/tdataregR.err @@ -8,21 +8,9 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #002: (file name) line (number) in H5VL_native_object_open(): unable to dereference object major: References minor: Unable to initialize object - #003: (file name) line (number) in H5R_dereference(): Unable to read dataset region information - major: References - minor: Read failed - #004: (file name) line (number) in H5HG_read(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #005: (file name) line (number) in H5HG_protect(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #006: (file name) line (number) in H5AC_protect(): H5C_protect() failed. - major: Object cache - minor: Unable to protect metadata - #007: (file name) line (number) in H5C_protect(): incorrect cache entry type - major: Object cache - minor: Inappropriate type + #003: (file name) line (number) in H5R_dereference(): Undefined reference pointer + major: Invalid arguments to routine + minor: Bad value HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Rdereference2(): unable to dereference object major: References @@ -33,21 +21,9 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #002: (file name) line (number) in H5VL_native_object_open(): unable to dereference object major: References minor: Unable to initialize object - #003: (file name) line (number) in H5R_dereference(): Unable to read dataset region information - major: References - minor: Read failed - #004: (file name) line (number) in H5HG_read(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #005: (file name) line (number) in H5HG_protect(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #006: (file name) line (number) in H5AC_protect(): H5C_protect() failed. - major: Object cache - minor: Unable to protect metadata - #007: (file name) line (number) in H5C_protect(): incorrect cache entry type - major: Object cache - minor: Inappropriate type + #003: (file name) line (number) in H5R_dereference(): Undefined reference pointer + major: Invalid arguments to routine + minor: Bad value H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): #000: (file name) line (number) in h5tools_dump_simple_data(): H5Rdereference failed major: Failure in tools library diff --git a/tools/h5dump/h5dump_xml.c b/tools/h5dump/h5dump_xml.c index 64667cb..6ccbc8c 100644 --- a/tools/h5dump/h5dump_xml.c +++ b/tools/h5dump/h5dump_xml.c @@ -3563,7 +3563,7 @@ xml_dump_fill_value(hid_t dcpl, hid_t type) /* Render the element */ h5tools_str_reset(&buffer); - h5tools_str_append(&buffer, "\"%f\"", *(float *) buf); + h5tools_str_append(&buffer, "\"%f\"", (double)*(float *)buf); h5tools_render_element(rawoutstream, outputformat, &ctx, &buffer, &curr_pos, (size_t)outputformat->line_ncols, (hsize_t)0, (hsize_t)0); ctx.need_prefix = TRUE; diff --git a/tools/h5dump/h5dumpgentest.c b/tools/h5dump/h5dumpgentest.c index 82273a3..c04afe9 100644 --- a/tools/h5dump/h5dumpgentest.c +++ b/tools/h5dump/h5dumpgentest.c @@ -429,7 +429,7 @@ gent_dataset(void) for(i = 0; i < 30; i++) for(j = 0; j < 20; j++) - dset2[i][j] = 0.0001 * j + i; + dset2[i][j] = 0.0001F * j + i; H5Dwrite(dataset, H5T_NATIVE_DOUBLE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset2); @@ -524,7 +524,7 @@ gent_attribute(void) space = H5Screate_simple(1, dims, NULL); attr = H5Acreate2(root, "attr3", H5T_IEEE_F64BE, space, H5P_DEFAULT, H5P_DEFAULT); - for(i = 0; i < 10; i++) d[i] = 0.1 * i; + for(i = 0; i < 10; i++) d[i] = 0.1F * i; H5Awrite(attr, H5T_NATIVE_DOUBLE, d); H5Sclose(space); @@ -952,16 +952,16 @@ static void gent_compound_dt(void) { /* test compound data type */ for(i = 0; i < (int)sdim; i++) { dset1[i].a = i; dset1[i].b = (float)(i*i); - dset1[i].c = (float)(1./(i+1)); + dset1[i].c = (float)(1.0F/(i+1)); dset2[i].a = i; - dset2[i].b = (float)(i+ i*0.1); + dset2[i].b = (float)(i+ i*0.1F); dset4[i].a = i; dset4[i].b = (float)(i+3); dset5[i].a = i; - dset5[i].b = (float)(i*0.1); + dset5[i].b = (float)(i*0.1F); } @@ -1137,16 +1137,16 @@ static void gent_compound_dt2(void) { /* test compound data type */ for(i = 0; i < (int)sdim; i++) { dset1[i].a = i; dset1[i].b = (float)(i*i); - dset1[i].c = (float)(1./(i+1)); + dset1[i].c = (float)(1.0F/(i+1)); dset2[i].a = i; - dset2[i].b = (float)(i+ i*0.1); + dset2[i].b = (float)(i+ i*0.1F); dset4[i].a = i; - dset4[i].b = (float)(i*1.0); + dset4[i].b = (float)(i*1.0F); dset5[i].a = i; - dset5[i].b = (float)(i*1.0); + dset5[i].b = (float)(i*1.0F); } fid = H5Fcreate(FILE9, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); @@ -1386,7 +1386,7 @@ static void gent_all(void) space = H5Screate_simple(1, dims, NULL); dataset = H5Dcreate2(group, "dset2.1", H5T_IEEE_F32BE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); for(i = 0; i < 10; i++) - dset2_1[i] = (float)(i * 0.1 + 1); + dset2_1[i] = (float)(i * 0.1F + 1); H5Dwrite(dataset, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset2_1); H5Sclose(space); H5Dclose(dataset); @@ -1397,7 +1397,7 @@ static void gent_all(void) dataset = H5Dcreate2(group, "dset2.2", H5T_IEEE_F32BE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); for(i = 0; i < 3; i++) for(j = 0; j < 5; j++) - dset2_2[i][j] = (float)((i + 1) * j * 0.1); + dset2_2[i][j] = (float)((i + 1) * j * 0.1F); H5Dwrite(dataset, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset2_2); H5Sclose(space); H5Dclose(dataset); @@ -1565,7 +1565,7 @@ gent_many(void) space2 = H5Screate_simple(1, dims, NULL); attr = H5Acreate2(dataset, "attr3", H5T_IEEE_F64BE, space2, H5P_DEFAULT, H5P_DEFAULT); for(i = 0; i < 10; i++) - d[i] = 0.1 * i; + d[i] = 0.1F * i; H5Awrite(attr, H5T_NATIVE_DOUBLE, d); H5Sclose(space2); H5Aclose(attr); @@ -2378,10 +2378,10 @@ static void gent_nestcomp(void) for(i = 0; i< 10; i++) { s1[i].a = i; s1[i].b = (float)(i*i); - s1[i].c = 1./(i+1); + s1[i].c = 1.0F/(i+1); s1[i].d.a = 65 + i; - s1[i].d.b[0] = -100.; - s1[i].d.b[1] = 100.; + s1[i].d.b[0] = -100.0F; + s1[i].d.b[1] = 100.0F; } /* @@ -2582,7 +2582,7 @@ static void gent_vldatatypes(void) wdata[i].len = i + 1; for(j = 0; j < i + 1; j++) - ((float *)wdata[i].p)[j] = (float)(i * 10 + ((float)j) / 10.0); + ((float *)wdata[i].p)[j] = (float)(i * 10 + ((float)j) / 10.0F); } /* write out the floats in little-endian format */ @@ -2716,7 +2716,7 @@ static void gent_vldatatypes3(void) /* Allocate and initialize VL data to write */ for(i=0; i<SPACE1_DIM1; i++) { wdata[i].i=i*10; - wdata[i].f=(float)((i*20)/3.0); + wdata[i].f=(float)((i*20)/3.0F); wdata[i].v.p=HDmalloc((i+1)*sizeof(unsigned int)); wdata[i].v.len=i+1; for(j=0; j<(i+1); j++) @@ -2788,7 +2788,7 @@ static void gent_vldatatypes4(void) wdata[i].len=i+1; for(j=0; j<(i+1); j++) { ((s1 *)wdata[i].p)[j].i=i*10+j; - ((s1 *)wdata[i].p)[j].f=(float)((i*20+j)/3.0); + ((s1 *)wdata[i].p)[j].f=(float)((i*20+j)/3.0F); } /* end for */ } /* end for */ @@ -3159,7 +3159,7 @@ static void gent_array4(void) for(i=0; i<SPACE1_DIM1; i++) for(j=0; j<ARRAY1_DIM1; j++) { wdata[i][j].i=i*10+j; - wdata[i][j].f=(float)(i*2.5+j); + wdata[i][j].f=(float)(i*2.5F+j); } /* end for */ /* Create file */ @@ -3227,7 +3227,7 @@ static void gent_array5(void) for(j=0; j<ARRAY1_DIM1; j++) { wdata[i][j].i=i*10+j; for(k=0; k<ARRAY1_DIM1; k++) - wdata[i][j].f[k]=(float)(i*10+j*2.5+k); + wdata[i][j].f[k]=(float)(i*10+j*2.5F+k); } /* end for */ /* Create file */ @@ -4933,10 +4933,10 @@ static void gent_compound_complex(void) } } - Array1[m].e = (float)( m * .96 ); + Array1[m].e = (float)( m * 0.96F ); for(n = 0; n < F41_ARRAY_DIMf; n++) { - Array1[m].f[n] = ( m * 1024.9637 ); + Array1[m].f[n] = ( m * 1024.9637F ); } Array1[m].g = 'm'; @@ -5433,7 +5433,7 @@ static void gent_filters(void) * shuffle *------------------------------------------------------------------------- */ -#if defined (H5_HAVE_FILTER_SHUFFLE) + /* remove the filters from the dcpl */ ret = H5Premove_filter(dcpl,H5Z_FILTER_ALL); HDassert(ret >= 0); @@ -5444,14 +5444,13 @@ static void gent_filters(void) ret=make_dset(fid,"shuffle",sid,H5T_NATIVE_INT,dcpl,buf1); HDassert(ret >= 0); -#endif /*------------------------------------------------------------------------- * checksum *------------------------------------------------------------------------- */ -#if defined (H5_HAVE_FILTER_FLETCHER32) + /* remove the filters from the dcpl */ ret = H5Premove_filter(dcpl,H5Z_FILTER_ALL); HDassert(ret >= 0); @@ -5462,13 +5461,12 @@ static void gent_filters(void) ret=make_dset(fid,"fletcher32",sid,H5T_NATIVE_INT,dcpl,buf1); HDassert(ret >= 0); -#endif /*------------------------------------------------------------------------- * nbit *------------------------------------------------------------------------- */ -#if defined (H5_HAVE_FILTER_NBIT) + /* remove the filters from the dcpl */ ret = H5Premove_filter(dcpl,H5Z_FILTER_ALL); HDassert(ret >= 0); @@ -5481,13 +5479,12 @@ static void gent_filters(void) H5Tset_precision(tid,H5Tget_size(tid)-1); ret=make_dset(fid,"nbit",sid,tid,dcpl,buf1); HDassert(ret >= 0); -#endif /*------------------------------------------------------------------------- * scaleoffset *------------------------------------------------------------------------- */ -#if defined (H5_HAVE_FILTER_SCALEOFFSET) + /* remove the filters from the dcpl */ ret = H5Premove_filter(dcpl,H5Z_FILTER_ALL); HDassert(ret >= 0); @@ -5498,7 +5495,6 @@ static void gent_filters(void) ret=make_dset(fid,"scaleoffset",sid,H5T_NATIVE_INT,dcpl,buf1); HDassert(ret >= 0); -#endif /*------------------------------------------------------------------------- * all filters @@ -5508,11 +5504,9 @@ static void gent_filters(void) ret = H5Premove_filter(dcpl,H5Z_FILTER_ALL); HDassert(ret >= 0); -#if defined (H5_HAVE_FILTER_SHUFFLE) /* set the shuffle filter */ ret = H5Pset_shuffle(dcpl); HDassert(ret >= 0); -#endif #ifdef H5_HAVE_FILTER_SZIP if(h5tools_can_encode(H5Z_FILTER_SZIP) == 1) { @@ -5529,17 +5523,13 @@ static void gent_filters(void) HDassert(ret >= 0); #endif -#if defined (H5_HAVE_FILTER_FLETCHER32) /* set the checksum filter */ ret = H5Pset_fletcher32(dcpl); HDassert(ret >= 0); -#endif -#if defined (H5_HAVE_FILTER_NBIT) /* set the nbit filter */ ret = H5Pset_nbit(dcpl); HDassert(ret >= 0); -#endif ret=make_dset(fid,"all",sid,H5T_NATIVE_INT,dcpl,buf1); HDassert(ret >= 0); @@ -6883,7 +6873,7 @@ gent_fpformat(void) { hid_t fid, sid, did; hsize_t dims[1] = {6}; - double dbuf[6] = {-0.1234567, 0.1234567, 0, 0, 0, 0}; + double dbuf[6] = {-0.1234567f, 0.1234567f, 0, 0, 0, 0}; float fbuf[6] = {-0.1234567f, 0.1234567f, 0, 0, 0, 0}; fid = H5Fcreate(FILE60, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); @@ -7203,7 +7193,7 @@ gent_packedbits(void) for(i = 0; i < dims[0]; i++) for(j = 0; j < dims[1]; j++) - dsetdbl[i][j] = 0.0001 * j + i; + dsetdbl[i][j] = 0.0001F * j + i; H5Dwrite(dataset, H5T_NATIVE_DOUBLE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetdbl); @@ -7393,7 +7383,7 @@ gent_attr_intsize(void) for(i = 0; i < dims[0]; i++) for(j = 0; j < dims[1]; j++) - dsetdbl[i][j] = 0.0001 * j + i; + dsetdbl[i][j] = 0.0001F * j + i; H5Awrite(attr, H5T_NATIVE_DOUBLE, dsetdbl); @@ -7601,7 +7591,7 @@ static void gent_compound_intsizes(void) { for(n = 0; n < dims[0]; n++) for(o = 0; o < dims[1]; o++) - Array1[m].dsetdbl[n][o] = 0.0001 * o + n; + Array1[m].dsetdbl[n][o] = 0.0001F * o + n; } /* Create the array data type for the 8 bits signed int array */ @@ -7876,7 +7866,7 @@ static void gent_compound_attr_intsizes(void) { for(n = 0; n < dims[0]; n++) for(o = 0; o < dims[1]; o++) - Array1[m].dsetdbl[n][o] = 0.0001 * o + n; + Array1[m].dsetdbl[n][o] = 0.0001F * o + n; } /* Create the array data type for the 8 bits signed int array */ @@ -8044,17 +8034,17 @@ static void gent_nested_compound_dt(void) { /* test nested data type */ dset1[i].b = (float)(i*i); dset2[i].a = i; - dset2[i].b = (float)(i+i*0.1); + dset2[i].b = (float)(i+i*0.1F); dset2[i].c = GREEN; for(j = 0; j < 5; j++) { dset3[i].a[j] = i*j; for(k = 0; k < 6; k++) { - dset3[i].b[j][k] = (float)(i*j*k*1.0); + dset3[i].b[j][k] = (float)(i*j*k*1.0F); } } dset3[i].c.a = i; - dset3[i].c.b = (float)(i*1.0); + dset3[i].c.b = (float)(i*1.0F); } fid = H5Fcreate(FILE72, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); @@ -8342,7 +8332,7 @@ gent_intscalars(void) for(i = 0; i < dims[0]; i++) for(j = 0; j < dims[1]; j++) - dsetdbl[i][j] = 0.0001 * j + i; + dsetdbl[i][j] = 0.0001F * j + i; H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetdbl); @@ -8541,7 +8531,7 @@ gent_attr_intscalars(void) for(i = 0; i < dims[0]; i++) for(j = 0; j < dims[1]; j++) - dsetdbl[i][j] = 0.0001 * j + i; + dsetdbl[i][j] = 0.0001F * j + i; H5Awrite(attr, tid, dsetdbl); @@ -8727,7 +8717,7 @@ static void gent_compound_int_array(void) { dims[0] = F76_DIM8; for(n = 0; n < dims[0]; n++) - Cmpd1[m].dsetdbl[n] = 0.0001 + n; + Cmpd1[m].dsetdbl[n] = 0.0001F + n; } /* Create the array data type for the 8 bits signed int array */ @@ -8958,8 +8948,8 @@ static void gent_compound_ints(void) { val64bits <<= 1; /* Double Dummy set for failure tests */ - Cmpd1[m].dsetdbl = 0.0001 + m; - Cmpd2[m].dsetdbl = 0.0001 + m; + Cmpd1[m].dsetdbl = 0.0001F + m; + Cmpd2[m].dsetdbl = 0.0001F + m; } /* Create the dataspace */ @@ -9296,7 +9286,7 @@ gent_intattrscalars(void) for(i = 0; i < dims[0]; i++) for(j = 0; j < dims[1]; j++) - dsetdbl[i][j] = 0.0001 * j + i; + dsetdbl[i][j] = 0.0001F * j + i; H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetdbl); /* Attribute of double */ @@ -9561,7 +9551,7 @@ gent_intsattrs(void) for(i = 0; i < dims[0]; i++) for(j = 0; j < dims[1]; j++) { - dsetdbl[i][j] = 0.0001 * j + i; + dsetdbl[i][j] = 0.0001F * j + i; asetdbl[i*dims[1]+j] = dsetdbl[i][j]; } diff --git a/tools/h5dump/testh5dump.sh.in b/tools/h5dump/testh5dump.sh.in index 0c72a8d..2fc09da 100644 --- a/tools/h5dump/testh5dump.sh.in +++ b/tools/h5dump/testh5dump.sh.in @@ -19,10 +19,6 @@ srcdir=@srcdir@ USE_FILTER_SZIP="@USE_FILTER_SZIP@" USE_FILTER_DEFLATE="@USE_FILTER_DEFLATE@" -USE_FILTER_SHUFFLE="@USE_FILTER_SHUFFLE@" -USE_FILTER_FLETCHER32="@USE_FILTER_FLETCHER32@" -USE_FILTER_NBIT="@USE_FILTER_NBIT@" -USE_FILTER_SCALEOFFSET="@USE_FILTER_SCALEOFFSET@" TESTNAME=h5dump EXIT_SUCCESS=0 @@ -108,6 +104,7 @@ $SRC_H5DUMP_TESTFILES/tcmpdattrintsize.h5 $SRC_H5DUMP_TESTFILES/tcmpdintsize.h5 $SRC_H5DUMP_TESTFILES/tcompound.h5 $SRC_H5DUMP_TESTFILES/tcompound_complex.h5 +$SRC_H5DUMP_TESTFILES/tcompound_enum.h5 $SRC_H5DUMP_TESTFILES/tdatareg.h5 $SRC_H5DUMP_TESTFILES/tdset.h5 $SRC_H5DUMP_TESTFILES/tempty.h5 @@ -231,6 +228,7 @@ $SRC_H5DUMP_TESTFILES/tcomp-1.ddl $SRC_H5DUMP_TESTFILES/tcomp-2.ddl $SRC_H5DUMP_TESTFILES/tcomp-3.ddl $SRC_H5DUMP_TESTFILES/tcomp-4.ddl +$SRC_H5DUMP_TESTFILES/tcompound_enum.ddl $SRC_H5DUMP_TESTFILES/tcompact.ddl $SRC_H5DUMP_TESTFILES/tcontents.ddl $SRC_H5DUMP_TESTFILES/tcontiguos.ddl @@ -440,8 +438,21 @@ TESTING() { # the actual output file is calculated by replacing the `.ddl' with # `.out'. The actual output is not removed if $HDF5_NOCLEANUP has a # non-zero value. +# If $1 == ignorecase then do caseless CMP and DIFF. # ADD_H5_TEST TOOLTEST() { + # check if caseless compare and diff requested + if [ "$1" = ignorecase ]; then + caseless="-i" + # replace cmp with diff which runs much longer. + xCMP="$DIFF -i" + shift + else + caseless="" + # stick with faster cmp if ignorecase is not requested. + xCMP="$CMP" + fi + expect="$TESTDIR/$1" actual="$TESTDIR/`basename $1 .ddl`.out" actual_err="$TESTDIR/`basename $1 .ddl`.err" @@ -467,13 +478,13 @@ TOOLTEST() { # Create the expect file if it doesn't yet exist. echo " CREATED" cp $actual $expect - elif $CMP $expect $actual; then + elif $xCMP $expect $actual > /dev/null 2>&1 ; then echo " PASSED" else echo "*FAILED*" echo " Expected result (*.ddl) differs from actual result (*.out)" nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + test yes = "$verbose" && $DIFF $caseless $expect $actual |sed 's/^/ /' fi # Clean up output file @@ -1020,6 +1031,7 @@ TOOLTEST tcomp-4.ddl --enable-error-stack tcompound_complex.h5 #test for the nested compound type TOOLTEST tnestcomp-1.ddl --enable-error-stack tnestedcomp.h5 TOOLTEST tnestedcmpddt.ddl --enable-error-stack tnestedcmpddt.h5 +TOOLTEST ignorecase tcompound_enum.ddl --enable-error-stack tcompound_enum.h5 # test for options TOOLTEST4 tall-1.ddl --enable-error-stack tall.h5 @@ -1184,7 +1196,7 @@ TOOLTEST tallfilters.ddl --enable-error-stack -H -p -d all tfilters.h5 # user defined TOOLTEST tuserfilter.ddl --enable-error-stack -H -p -d myfilter tfilters.h5 -if test $USE_FILTER_DEFLATE = "yes" -a $USE_FILTER_SHUFFLE = "yes" -a $USE_FILTER_FLETCHER32 = "yes" -a $USE_FILTER_NBIT = "yes" -a $USE_FILTER_SCALEOFFSET = "yes" ; then +if test $USE_FILTER_DEFLATE = "yes" ; then # data read internal filters TOOLTEST treadintfilter.ddl --enable-error-stack -d deflate -d shuffle -d fletcher32 -d nbit -d scaleoffset tfilters.h5 if test $USE_FILTER_SZIP = "yes"; then diff --git a/tools/h5dump/testh5dumppbits.sh.in b/tools/h5dump/testh5dumppbits.sh.in index 0f6503d..6556ff5 100644 --- a/tools/h5dump/testh5dumppbits.sh.in +++ b/tools/h5dump/testh5dumppbits.sh.in @@ -20,10 +20,6 @@ srcdir=@srcdir@ # Determine which filters are available USE_FILTER_SZIP="@USE_FILTER_SZIP@" USE_FILTER_DEFLATE="@USE_FILTER_DEFLATE@" -USE_FILTER_SHUFFLE="@USE_FILTER_SHUFFLE@" -USE_FILTER_FLETCHER32="@USE_FILTER_FLETCHER32@" -USE_FILTER_NBIT="@USE_FILTER_NBIT@" -USE_FILTER_SCALEOFFSET="@USE_FILTER_SCALEOFFSET@" TESTNAME=h5dump EXIT_SUCCESS=0 diff --git a/tools/h5dump/testh5dumpxml.sh.in b/tools/h5dump/testh5dumpxml.sh.in index 4dad9cd..1efde85 100644 --- a/tools/h5dump/testh5dumpxml.sh.in +++ b/tools/h5dump/testh5dumpxml.sh.in @@ -21,8 +21,6 @@ TESTNAME=h5dumpxml EXIT_SUCCESS=0 EXIT_FAILURE=1 -H5_LONE_COLON="@H5_LONE_COLON@" - DUMPER=h5dump # The tool name DUMPER_BIN=`pwd`/$DUMPER # The path of the tool binary @@ -356,15 +354,7 @@ TOOLTEST tnamed_dtype_attr.h5.xml --xml tnamed_dtype_attr.h5 TOOLTEST tempty-dtd.h5.xml --xml --use-dtd tempty.h5 TOOLTEST tempty-dtd-2.h5.xml --xml -u tempty.h5 - -# The lone colon here confuses some systems (Cray X1). Skip -# it if configure detects that this is a problem. -if test "X$H5_LONE_COLON" != "Xno"; then - TOOLTEST tempty-nons.h5.xml --xml -X ":" tempty.h5 -else - SKIP tempty-nons.h5.xml --xml -X ":" tempty.h5 -fi - +TOOLTEST tempty-nons.h5.xml --xml -X ":" tempty.h5 TOOLTEST tempty-nons-2.h5.xml --xml --xml-ns=":" tempty.h5 ## Some of these combinations are syntactically correct but |