[svn-r24044] Merging r23833 through r24043 from trunk.

3 files changed, 487 insertions, 518 deletions

diff --git a/tools/h5jam/CMakeLists.txt b/tools/h5jam/CMakeLists.txt
index af9639d..49d1b0c 100644
--- a/tools/h5jam/CMakeLists.txt
+++ b/tools/h5jam/CMakeLists.txt
@@ -40,12 +40,6 @@ SET (H5_DEP_EXECUTABLES
     h5unjam
 )
 
-##############################################################################
-##############################################################################
-###           T E S T I N G                                                ###
-##############################################################################
-##############################################################################
-
 IF (BUILD_TESTING)
   # --------------------------------------------------------------------
   # Add the h5jam test executables
@@ -60,427 +54,7 @@ IF (BUILD_TESTING)
     #ADD_TEST (NAME h5jamgentest COMMAND $<TARGET_FILE:h5jamgentest>)
   ENDIF (HDF5_BUILD_GENERATORS AND NOT BUILD_SHARED_LIBS)
 
-  SET (HDF5_REFERENCE_TXT_FILES
-      u10.txt
-      u511.txt
-      u512.txt
-      u513.txt
-      h5jam-help.txt
-      h5unjam-help.txt
-      h5jam-ub-nohdf5.txt
-  )
-  SET (HDF5_REFERENCE_TEST_FILES
-      tall.h5
-      twithub.h5
-      twithub513.h5
-  )
-
-  FILE (MAKE_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles")
-  FOREACH (h5_file ${HDF5_REFERENCE_TEST_FILES})
-    SET (dest "${PROJECT_BINARY_DIR}/testfiles/${h5_file}")
-    #MESSAGE (STATUS " Copying ${h5_file}")
-    ADD_CUSTOM_COMMAND (
-        TARGET     h5jam
-        POST_BUILD
-        COMMAND    ${CMAKE_COMMAND}
-        ARGS       -E copy_if_different ${HDF5_TOOLS_H5JAM_SOURCE_DIR}/testfiles/${h5_file} ${dest}
-    )
-  ENDFOREACH (h5_file ${HDF5_REFERENCE_TEST_FILES})
-
-  FOREACH (txt_file ${HDF5_REFERENCE_TXT_FILES})
-    SET (dest "${PROJECT_BINARY_DIR}/testfiles/${txt_file}")
-    #MESSAGE (STATUS " Copying ${txt_file}")
-    ADD_CUSTOM_COMMAND (
-        TARGET     h5jam
-        POST_BUILD
-        COMMAND    ${CMAKE_COMMAND}
-        ARGS       -E copy_if_different ${HDF5_TOOLS_H5JAM_SOURCE_DIR}/testfiles/${txt_file} ${dest}
-    )
-  ENDFOREACH (txt_file ${HDF5_REFERENCE_TXT_FILES})
-    
-##############################################################################
-##############################################################################
-###           T H E   T E S T S  M A C R O S                               ###
-##############################################################################
-##############################################################################
-
-  # ============================================================
-  # TEST_H5JAM_OUTPUT
-  # For the purpose to verify only output & exitcode from h5jam
-  #
-  MACRO (TEST_H5JAM_OUTPUT expectfile resultcode)
-    # If using memchecker add tests without using scripts
-    IF (HDF5_ENABLE_USING_MEMCHECKER)
-      ADD_TEST (NAME H5JAM-${expectfile} COMMAND $<TARGET_FILE:h5jam> ${ARGN})
-      IF (NOT "${resultcode}" STREQUAL "0")
-        SET_TESTS_PROPERTIES (H5JAM-${expectfile} PROPERTIES WILL_FAIL "true")
-      ENDIF (NOT "${resultcode}" STREQUAL "0")
-    ELSE (HDF5_ENABLE_USING_MEMCHECKER)
-      ADD_TEST (
-          NAME H5JAM-${expectfile}-clear-objects
-          COMMAND    ${CMAKE_COMMAND}
-              -E remove
-              ${expectfile}.out
-              ${expectfile}.out.err
-      )
-      ADD_TEST (
-          NAME H5JAM-${expectfile}
-          COMMAND "${CMAKE_COMMAND}"
-              -D "TEST_PROGRAM=$<TARGET_FILE:h5jam>"
-              -D "TEST_ARGS:STRING=${ARGN}"
-              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-              -D "TEST_OUTPUT=${expectfile}.out"
-              -D "TEST_EXPECT=${resultcode}"
-              -D "TEST_REFERENCE=testfiles/${expectfile}.txt"
-              -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
-      )
-      SET_TESTS_PROPERTIES (H5JAM-${expectfile} PROPERTIES DEPENDS H5JAM-${expectfile}-clear-objects)
-    ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
-  ENDMACRO (TEST_H5JAM_OUTPUT)
-
-  # ============================================================
-  # TEST_H5UNJAM_OUTPUT
-  # For the purpose to verify only output & exitcode from h5unjam
-  #
-  MACRO (TEST_H5UNJAM_OUTPUT expectfile resultcode)
-    # If using memchecker add tests without using scripts
-    IF (HDF5_ENABLE_USING_MEMCHECKER)
-      ADD_TEST (NAME H5JAM-UNJAM-${expectfile} COMMAND $<TARGET_FILE:h5unjam> ${ARGN})
-      IF (NOT "${resultcode}" STREQUAL "0")
-        SET_TESTS_PROPERTIES (H5JAM-UNJAM-${expectfile} PROPERTIES WILL_FAIL "true")
-      ENDIF (NOT "${resultcode}" STREQUAL "0")
-    ELSE (HDF5_ENABLE_USING_MEMCHECKER)
-      ADD_TEST (
-          NAME H5JAM-UNJAM-${expectfile}-clear-objects
-          COMMAND    ${CMAKE_COMMAND}
-              -E remove
-              ${expectfile}.out
-              ${expectfile}.out.err
-      )
-      ADD_TEST (
-          NAME H5JAM-UNJAM-${expectfile}
-          COMMAND "${CMAKE_COMMAND}"
-              -D "TEST_PROGRAM=$<TARGET_FILE:h5unjam>"
-              -D "TEST_ARGS=${ARGN}"
-              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-              -D "TEST_OUTPUT=${expectfile}.out"
-              -D "TEST_EXPECT=${resultcode}"
-              -D "TEST_REFERENCE=testfiles/${expectfile}.txt"
-              -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
-      )
-      SET_TESTS_PROPERTIES (H5JAM-UNJAM-${expectfile} PROPERTIES DEPENDS H5JAM-UNJAM-${expectfile}-clear-objects)
-    ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
-  ENDMACRO (TEST_H5UNJAM_OUTPUT)
-
-  MACRO (CHECKFILE testname testdepends expected actual)
-    # If using memchecker add tests without using scripts
-    IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-      ADD_TEST (
-          NAME H5JAM-${testname}-CHECKFILE-clear-objects
-          COMMAND    ${CMAKE_COMMAND}
-              -E remove
-              ${actual}.new
-              ${actual}.new.err
-              ${actual}.out
-              ${actual}.out.err
-      )
-      SET_TESTS_PROPERTIES (H5JAM-${testname}-CHECKFILE-clear-objects PROPERTIES DEPENDS ${testdepends})
-      ADD_TEST (
-          NAME H5JAM-${testname}-CHECKFILE-H5DMP
-          COMMAND "${CMAKE_COMMAND}"
-              -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
-              -D "TEST_ARGS:STRING=testfiles/${expected}"
-              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-              -D "TEST_OUTPUT=${actual}.new"
-              -D "TEST_EXPECT=0"
-              -D "TEST_FILTER=(^(HDF5)[^\n]*)"
-              -D "TEST_SKIP_COMPARE=TRUE"
-              -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
-      )
-      SET_TESTS_PROPERTIES (H5JAM-${testname}-CHECKFILE-H5DMP PROPERTIES DEPENDS H5JAM-${testname}-CHECKFILE-clear-objects)
-      ADD_TEST (
-          NAME H5JAM-${testname}-CHECKFILE-H5DMP_CMP
-          COMMAND "${CMAKE_COMMAND}"
-              -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
-              -D "TEST_ARGS:STRING=${actual}"
-              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-              -D "TEST_OUTPUT=${actual}.out"
-              -D "TEST_EXPECT=0"
-              -D "TEST_FILTER=(^(HDF5)[^\n]*)"
-              -D "TEST_REFERENCE=${actual}.new"
-              -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
-      )
-      SET_TESTS_PROPERTIES (H5JAM-${testname}-CHECKFILE-H5DMP_CMP PROPERTIES DEPENDS H5JAM-${testname}-CHECKFILE-H5DMP)
-    ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-  ENDMACRO(CHECKFILE testname testdepends expected actual)
-
-  MACRO (UNJAMTEST testname setfile infile ufile chkfile outfile)
-    IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-      ADD_TEST (
-          NAME H5JAM-${testname}-UNJAM-SETUP-clear-objects
-          COMMAND ${CMAKE_COMMAND} -E remove ${infile}
-      )
-      ADD_TEST (
-          NAME H5JAM-${testname}-UNJAM-SETUP
-          COMMAND ${CMAKE_COMMAND} -E copy_if_different ${HDF5_TOOLS_H5JAM_SOURCE_DIR}/testfiles/${setfile} ${PROJECT_BINARY_DIR}/${infile}
-      )
-      SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM-SETUP PROPERTIES DEPENDS H5JAM-${testname}-UNJAM-SETUP-clear-objects)
-      ADD_TEST (
-          NAME H5JAM-${testname}-UNJAM-clear-objects
-          COMMAND ${CMAKE_COMMAND} -E remove ${outfile}
-      )
-      SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM-clear-objects PROPERTIES DEPENDS H5JAM-${testname}-UNJAM-SETUP)
-      IF (NOT "${ufile}" STREQUAL "NONE")
-        ADD_TEST (
-            NAME H5JAM-${testname}-UNJAM_D-clear-objects
-            COMMAND ${CMAKE_COMMAND} -E remove ${ufile}
-        )
-        SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM_D-clear-objects PROPERTIES DEPENDS H5JAM-${testname}-UNJAM-clear-objects)
-        ADD_TEST (NAME H5JAM-${testname}-UNJAM COMMAND $<TARGET_FILE:h5unjam> -i ${infile} -u ${ufile} -o ${outfile})
-        SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM PROPERTIES DEPENDS H5JAM-${testname}-UNJAM_D-clear-objects)
-        SET (compare_test ${ufile})
-      ELSE (NOT "${ufile}" STREQUAL "NONE")
-        IF (NOT "${ARGN}" STREQUAL "--delete")
-          ADD_TEST (
-              NAME H5JAM-${testname}-UNJAM_D-clear-objects
-              COMMAND ${CMAKE_COMMAND} -E remove ${outfile}.ufile.txt ${outfile}.ufile.txt.err
-          )
-          SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM_D-clear-objects PROPERTIES DEPENDS H5JAM-${testname}-UNJAM-clear-objects)
-          ADD_TEST (
-              NAME H5JAM-${testname}-UNJAM
-              COMMAND "${CMAKE_COMMAND}"
-                  -D "TEST_PROGRAM=$<TARGET_FILE:h5unjam>"
-                  -D "TEST_ARGS:STRING=-i;${infile};-o;${outfile}"
-                  -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-                  -D "TEST_OUTPUT=${outfile}.ufile.txt"
-                  -D "TEST_EXPECT=0"
-                  -D "TEST_SKIP_COMPARE=TRUE"
-                  -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
-          )
-          SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM PROPERTIES DEPENDS H5JAM-${testname}-UNJAM_D-clear-objects)
-          SET (compare_test "${outfile}.ufile.txt")
-        ELSE (NOT "${ARGN}" STREQUAL "--delete")
-          ADD_TEST (NAME H5JAM-${testname}-UNJAM COMMAND $<TARGET_FILE:h5unjam> -i ${infile} -o ${outfile})
-          SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM PROPERTIES DEPENDS H5JAM-${testname}-UNJAM-clear-objects)
-          SET (compare_test "")
-        ENDIF (NOT "${ARGN}" STREQUAL "--delete")
-      ENDIF (NOT "${ufile}" STREQUAL "NONE")
-      IF (NOT "${compare_test}" STREQUAL "")
-        ADD_TEST (
-            NAME H5JAM-${testname}-UNJAM-CHECK_UB_1-clear-objects
-            COMMAND    ${CMAKE_COMMAND}
-                -E remove
-                ${infile}.len.txt
-                ${infile}.cmp
-                ${infile}-ub.cmp
-        )
-        SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM-CHECK_UB_1-clear-objects PROPERTIES DEPENDS "H5JAM-${testname}-UNJAM")
-        ADD_TEST (
-            NAME H5JAM-${testname}-UNJAM-CHECK_UB_1
-            COMMAND "${CMAKE_COMMAND}"
-                -D "TEST_PROGRAM=$<TARGET_FILE:tellub>"
-                -D "TEST_GET_PROGRAM=$<TARGET_FILE:getub>"
-                -D "TEST_CHECKUB=YES"
-                -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-                -D "TEST_HFILE=${infile}"
-                -D "TEST_UFILE=${compare_test}"
-                -D "TEST_EXPECT=0"
-                -D "TEST_OFILE="
-                -P "${HDF5_RESOURCES_DIR}/userblockTest.cmake"
-        )
-        SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM-CHECK_UB_1 PROPERTIES DEPENDS H5JAM-${testname}-UNJAM-CHECK_UB_1-clear-objects)
-      ENDIF (NOT "${compare_test}" STREQUAL "")
-
-      ADD_TEST (
-          NAME H5JAM-${testname}-UNJAM-CHECK_NOUB
-          COMMAND "${CMAKE_COMMAND}"
-              -D "TEST_PROGRAM=$<TARGET_FILE:tellub>"
-              -D "TEST_GET_PROGRAM=$<TARGET_FILE:getub>"
-              -D "TEST_CHECKUB=NO"
-              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-              -D "TEST_HFILE=${outfile}"
-              -D "TEST_EXPECT=0"
-              -D "TEST_UFILE=NULL"
-              -D "TEST_OFILE=NULL"
-              -P "${HDF5_RESOURCES_DIR}/userblockTest.cmake"
-      )
-      IF (NOT "${compare_test}" STREQUAL "")
-        SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM-CHECK_NOUB PROPERTIES DEPENDS H5JAM-${testname}-UNJAM-CHECK_UB_1)
-      ELSE (NOT "${compare_test}" STREQUAL "")
-        SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM-CHECK_NOUB PROPERTIES DEPENDS H5JAM-${testname}-UNJAM)
-      ENDIF (NOT "${compare_test}" STREQUAL "")
-
-      CHECKFILE (${testname} "H5JAM-${testname}-UNJAM-CHECK_NOUB" ${chkfile} ${outfile})
-    ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-  ENDMACRO(UNJAMTEST testname infile ufile outfile)
-
-  MACRO (JAMTEST testname jamfile infile chkfile outfile)
-    IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-      ADD_TEST (
-          NAME H5JAM-${testname}-clear-objects
-          COMMAND ${CMAKE_COMMAND} -E remove ${outfile} ${infile}.cpy.h5
-      )
-    ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-    ADD_TEST (NAME H5JAM-${testname} COMMAND $<TARGET_FILE:h5jam> -u testfiles/${jamfile} -i testfiles/${infile} -o ${outfile} ${ARGN})
-    IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-      SET_TESTS_PROPERTIES (H5JAM-${testname} PROPERTIES DEPENDS H5JAM-${testname}-clear-objects)
-      SET (compare_test ${outfile})
-      SET (compare_orig testfiles/${infile})
-      IF ("${ARGN}" STREQUAL "--clobber")
-        SET (compare_orig "")
-      ENDIF ("${ARGN}" STREQUAL "--clobber")
-
-      ADD_TEST (
-          NAME H5JAM-${testname}-CHECK_UB_1-clear-objects
-          COMMAND    ${CMAKE_COMMAND}
-              -E remove
-              ${compare_test}.len.txt
-              ${compare_test}.cmp
-              ${compare_test}-ub.cmp
-      )
-      SET_TESTS_PROPERTIES (H5JAM-${testname}-CHECK_UB_1-clear-objects PROPERTIES DEPENDS "H5JAM-${testname}")
-      ADD_TEST (
-          NAME H5JAM-${testname}-CHECK_UB_1
-          COMMAND "${CMAKE_COMMAND}"
-              -D "TEST_PROGRAM=$<TARGET_FILE:tellub>"
-              -D "TEST_GET_PROGRAM=$<TARGET_FILE:getub>"
-              -D "TEST_CHECKUB=YES"
-              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-              -D "TEST_HFILE=${compare_test}"
-              -D "TEST_UFILE=testfiles/${jamfile}"
-              -D "TEST_EXPECT=0"
-              -D "TEST_OFILE=${compare_orig}"
-              -P "${HDF5_RESOURCES_DIR}/userblockTest.cmake"
-      )
-      SET_TESTS_PROPERTIES (H5JAM-${testname}-CHECK_UB_1 PROPERTIES DEPENDS H5JAM-${testname}-CHECK_UB_1-clear-objects)
-      CHECKFILE (${testname} "H5JAM-${testname}-CHECK_UB_1" ${chkfile} ${outfile})
-    ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-  ENDMACRO (JAMTEST testname jamfile infile outfile)
-
-  MACRO (JAMTEST_NONE testname jamfile infile setfile chkfile)
-    IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-      ADD_TEST (
-          NAME H5JAM-${testname}_NONE-clear-objects
-          COMMAND ${CMAKE_COMMAND} -E remove 
-              ${chkfile} ${chkfile}.cpy.h5
-      )
-      ADD_TEST (
-          NAME H5JAM-${testname}_NONE-SETUP
-          COMMAND ${CMAKE_COMMAND} -E copy_if_different testfiles/${setfile} ${chkfile}
-      )
-      SET_TESTS_PROPERTIES (H5JAM-${testname}_NONE-SETUP PROPERTIES DEPENDS H5JAM-${testname}_NONE-clear-objects)
-
-      ADD_TEST (
-          NAME H5JAM-${testname}_NONE_COPY
-          COMMAND ${CMAKE_COMMAND} -E copy_if_different ${chkfile} ${chkfile}.cpy.h5
-      )
-      SET_TESTS_PROPERTIES (H5JAM-${testname}_NONE_COPY PROPERTIES DEPENDS H5JAM-${testname}_NONE-SETUP)
-
-      ADD_TEST (NAME H5JAM-${testname}_NONE COMMAND $<TARGET_FILE:h5jam> -u testfiles/${jamfile} -i ${chkfile} ${ARGN})
-      SET_TESTS_PROPERTIES (H5JAM-${testname}_NONE PROPERTIES DEPENDS H5JAM-${testname}_NONE_COPY)
-
-      SET (compare_test ${chkfile})
-      SET (compare_orig ${chkfile}.cpy.h5)
-      IF ("${ARGN}" STREQUAL "--clobber")
-        SET (compare_orig "")
-      ENDIF ("${ARGN}" STREQUAL "--clobber")
-
-      ADD_TEST (
-          NAME H5JAM-${testname}_NONE-CHECK_UB_1-clear-objects
-          COMMAND    ${CMAKE_COMMAND}
-              -E remove
-              ${compare_test}.len.txt
-              ${compare_test}.cmp
-              ${compare_test}-ub.cmp
-      )
-      SET_TESTS_PROPERTIES (H5JAM-${testname}_NONE-CHECK_UB_1-clear-objects PROPERTIES DEPENDS "H5JAM-${testname}_NONE")
-      ADD_TEST (
-          NAME H5JAM-${testname}_NONE-CHECK_UB_1
-          COMMAND "${CMAKE_COMMAND}"
-              -D "TEST_PROGRAM=$<TARGET_FILE:tellub>"
-              -D "TEST_GET_PROGRAM=$<TARGET_FILE:getub>"
-              -D "TEST_CHECKUB=YES"
-              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-              -D "TEST_HFILE=${compare_test}"
-              -D "TEST_UFILE=testfiles/${jamfile}"
-              -D "TEST_EXPECT=0"
-              -D "TEST_OFILE=${compare_orig}"
-              -P "${HDF5_RESOURCES_DIR}/userblockTest.cmake"
-      )
-      SET_TESTS_PROPERTIES (H5JAM-${testname}_NONE-CHECK_UB_1 PROPERTIES DEPENDS H5JAM-${testname}_NONE-CHECK_UB_1-clear-objects)
-      CHECKFILE (${testname} "H5JAM-${testname}_NONE-CHECK_UB_1" ${infile} ${chkfile})
-    ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-  ENDMACRO (JAMTEST_NONE testname jamfile infile setfile chkfile)
-
-##############################################################################
-##############################################################################
-###           T H E   T E S T S                                            ###
-##############################################################################
-##############################################################################
-
-#-------------------------------
-# Testing h5jam
-#-------------------------------
-  # help page
-  TEST_H5JAM_OUTPUT(h5jam-help 0 -h)
-
-  # don't allow HDF5 format file as an user block file
-  TEST_H5JAM_OUTPUT(h5jam-ub-nohdf5 1 -i testfiles/tall.h5 -u testfiles/tall.h5 -o tall-tmp.h5)
-
-  JAMTEST (tall_u10 u10.txt tall.h5 tall.h5 ta2.h5)
-  JAMTEST (tall_u511 u511.txt tall.h5 tall.h5 ta3.h5)
-  JAMTEST (tall_u512 u512.txt tall.h5 tall.h5 ta4.h5)
-  JAMTEST (tall_u513 u513.txt tall.h5 tall.h5 ta5.h5)
-
-  JAMTEST_NONE (N_ta_u10 u10.txt tall.h5 tall.h5 ta6.h5)
-  JAMTEST_NONE (N_ta_u511 u511.txt tall.h5 tall.h5 ta7.h5)
-  JAMTEST_NONE (N_ta_u512 u512.txt tall.h5 tall.h5 ta8.h5)
-  JAMTEST_NONE (N_ta_u513 u513.txt tall.h5 tall.h5 ta9.h5)
-
-  JAMTEST (twithub_u10 u10.txt twithub.h5 tall.h5 tax2.h5)
-  JAMTEST (twithub_u511 u511.txt twithub.h5 tall.h5 tax3.h5)
-  JAMTEST (twithub_u512 u512.txt twithub.h5 tall.h5 tax4.h5)
-  JAMTEST (twithub_u513 u513.txt twithub.h5 tall.h5 tax5.h5)
-
-  JAMTEST (twithub513_u10 u10.txt twithub513.h5 tall.h5 tax6.h5)
-  JAMTEST (twithub513_u511 u511.txt twithub513.h5 tall.h5 tax7.h5)
-  JAMTEST (twithub513_u512 u512.txt twithub513.h5 tall.h5 tax8.h5)
-  JAMTEST (twithub513_u513 u513.txt twithub513.h5 tall.h5 tax9.h5)
-
-  JAMTEST (twithub_u10_c u10.txt twithub.h5 tall.h5 taz2.h5 --clobber)
-  JAMTEST (twithub_u511_c u511.txt twithub.h5 tall.h5 taz3.h5 --clobber)
-  JAMTEST (twithub_u512_c u512.txt twithub.h5 tall.h5 taz4.h5 --clobber)
-  JAMTEST (twithub_u513_c u513.txt twithub.h5 tall.h5 taz5.h5 --clobber)
-
-  JAMTEST (twithub513_u10_c u10.txt twithub513.h5 tall.h5 taz6.h5 --clobber)
-  JAMTEST (twithub513_u511_c u511.txt twithub513.h5 tall.h5 taz7.h5 --clobber)
-  JAMTEST (twithub513_u512_c u512.txt twithub513.h5 tall.h5 taz8.h5 --clobber)
-  JAMTEST (twithub513_u513_c u513.txt twithub513.h5 tall.h5 taz9.h5 --clobber)
-
-  JAMTEST_NONE (N_twithub_u10_c u10.txt tall.h5 twithub.h5 tay2.h5 --clobber)
-  JAMTEST_NONE (N_twithub_u511_c u511.txt tall.h5 twithub.h5 tay3.h5 --clobber)
-  JAMTEST_NONE (N_twithub_u512_c u512.txt tall.h5 twithub.h5 tay4.h5 --clobber)
-  JAMTEST_NONE (N_twithub_u513_c u513.txt tall.h5 twithub.h5 tay5.h5 --clobber)
-
-  JAMTEST_NONE (N_twithub513_u10_c u10.txt tall.h5 twithub513.h5 tay6.h5 --clobber)
-  JAMTEST_NONE (N_twithub513_u511_c u511.txt tall.h5 twithub513.h5 tay7.h5 --clobber)
-  JAMTEST_NONE (N_twithub513_u512_c u512.txt tall.h5 twithub513.h5 tay8.h5 --clobber)
-  JAMTEST_NONE (N_twithub513_u513_c u513.txt tall.h5 twithub513.h5 tay9.h5 --clobber)
-
-#-------------------------------
-# Testing h5unjam
-#-------------------------------
-  # help page
-  TEST_H5UNJAM_OUTPUT(h5unjam-help 0 -h)
-
-  UNJAMTEST (twithub_tall twithub.h5 tai1.h5 o10.txt tall.h5 taa1.h5)
-  UNJAMTEST (twithub513_tall twithub513.h5 tai2.h5 o512.txt tall.h5 taa2.h5)
-
-  UNJAMTEST (N_twithub_tall twithub.h5 tai3.h5 NONE tall.h5 taa3.h5)
-  UNJAMTEST (N_twithub513_tall twithub513.h5 tai4.h5 NONE tall.h5 taa4.h5)
-
-  UNJAMTEST (D_twithub_tall twithub.h5 taj2.h5 NONE tall.h5 tac2.h5 --delete)
-  UNJAMTEST (D_twithub513_tall twithub513.h5 taj3.h5 NONE tall.h5 tac3.h5 --delete)
+  INCLUDE (CMakeTests.cmake)
 
 ENDIF (BUILD_TESTING)
 
diff --git a/tools/h5jam/CMakeTests.cmake b/tools/h5jam/CMakeTests.cmake
new file mode 100644
index 0000000..3816e85
--- /dev/null
+++ b/tools/h5jam/CMakeTests.cmake
@@ -0,0 +1,428 @@
+
+##############################################################################
+##############################################################################
+###           T E S T I N G                                                ###
+##############################################################################
+##############################################################################
+
+  SET (HDF5_REFERENCE_TXT_FILES
+      u10.txt
+      u511.txt
+      u512.txt
+      u513.txt
+      h5jam-help.txt
+      h5unjam-help.txt
+      h5jam-ub-nohdf5.txt
+  )
+  SET (HDF5_REFERENCE_TEST_FILES
+      tall.h5
+      twithub.h5
+      twithub513.h5
+  )
+
+  FILE (MAKE_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles")
+  FOREACH (h5_file ${HDF5_REFERENCE_TEST_FILES})
+    SET (dest "${PROJECT_BINARY_DIR}/testfiles/${h5_file}")
+    #MESSAGE (STATUS " Copying ${h5_file}")
+    ADD_CUSTOM_COMMAND (
+        TARGET     h5jam
+        POST_BUILD
+        COMMAND    ${CMAKE_COMMAND}
+        ARGS       -E copy_if_different ${HDF5_TOOLS_H5JAM_SOURCE_DIR}/testfiles/${h5_file} ${dest}
+    )
+  ENDFOREACH (h5_file ${HDF5_REFERENCE_TEST_FILES})
+
+  FOREACH (txt_file ${HDF5_REFERENCE_TXT_FILES})
+    SET (dest "${PROJECT_BINARY_DIR}/testfiles/${txt_file}")
+    #MESSAGE (STATUS " Copying ${txt_file}")
+    ADD_CUSTOM_COMMAND (
+        TARGET     h5jam
+        POST_BUILD
+        COMMAND    ${CMAKE_COMMAND}
+        ARGS       -E copy_if_different ${HDF5_TOOLS_H5JAM_SOURCE_DIR}/testfiles/${txt_file} ${dest}
+    )
+  ENDFOREACH (txt_file ${HDF5_REFERENCE_TXT_FILES})
+    
+##############################################################################
+##############################################################################
+###           T H E   T E S T S  M A C R O S                               ###
+##############################################################################
+##############################################################################
+
+  # ============================================================
+  # TEST_H5JAM_OUTPUT
+  # For the purpose to verify only output & exitcode from h5jam
+  #
+  MACRO (TEST_H5JAM_OUTPUT expectfile resultcode)
+    # If using memchecker add tests without using scripts
+    IF (HDF5_ENABLE_USING_MEMCHECKER)
+      ADD_TEST (NAME H5JAM-${expectfile} COMMAND $<TARGET_FILE:h5jam> ${ARGN})
+      IF (NOT "${resultcode}" STREQUAL "0")
+        SET_TESTS_PROPERTIES (H5JAM-${expectfile} PROPERTIES WILL_FAIL "true")
+      ENDIF (NOT "${resultcode}" STREQUAL "0")
+    ELSE (HDF5_ENABLE_USING_MEMCHECKER)
+      ADD_TEST (
+          NAME H5JAM-${expectfile}-clear-objects
+          COMMAND    ${CMAKE_COMMAND}
+              -E remove
+              ${expectfile}.out
+              ${expectfile}.out.err
+      )
+      ADD_TEST (
+          NAME H5JAM-${expectfile}
+          COMMAND "${CMAKE_COMMAND}"
+              -D "TEST_PROGRAM=$<TARGET_FILE:h5jam>"
+              -D "TEST_ARGS:STRING=${ARGN}"
+              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
+              -D "TEST_OUTPUT=${expectfile}.out"
+              -D "TEST_EXPECT=${resultcode}"
+              -D "TEST_REFERENCE=testfiles/${expectfile}.txt"
+              -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
+      )
+      SET_TESTS_PROPERTIES (H5JAM-${expectfile} PROPERTIES DEPENDS H5JAM-${expectfile}-clear-objects)
+    ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
+  ENDMACRO (TEST_H5JAM_OUTPUT)
+
+  # ============================================================
+  # TEST_H5UNJAM_OUTPUT
+  # For the purpose to verify only output & exitcode from h5unjam
+  #
+  MACRO (TEST_H5UNJAM_OUTPUT expectfile resultcode)
+    # If using memchecker add tests without using scripts
+    IF (HDF5_ENABLE_USING_MEMCHECKER)
+      ADD_TEST (NAME H5JAM-UNJAM-${expectfile} COMMAND $<TARGET_FILE:h5unjam> ${ARGN})
+      IF (NOT "${resultcode}" STREQUAL "0")
+        SET_TESTS_PROPERTIES (H5JAM-UNJAM-${expectfile} PROPERTIES WILL_FAIL "true")
+      ENDIF (NOT "${resultcode}" STREQUAL "0")
+    ELSE (HDF5_ENABLE_USING_MEMCHECKER)
+      ADD_TEST (
+          NAME H5JAM-UNJAM-${expectfile}-clear-objects
+          COMMAND    ${CMAKE_COMMAND}
+              -E remove
+              ${expectfile}.out
+              ${expectfile}.out.err
+      )
+      ADD_TEST (
+          NAME H5JAM-UNJAM-${expectfile}
+          COMMAND "${CMAKE_COMMAND}"
+              -D "TEST_PROGRAM=$<TARGET_FILE:h5unjam>"
+              -D "TEST_ARGS=${ARGN}"
+              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
+              -D "TEST_OUTPUT=${expectfile}.out"
+              -D "TEST_EXPECT=${resultcode}"
+              -D "TEST_REFERENCE=testfiles/${expectfile}.txt"
+              -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
+      )
+      SET_TESTS_PROPERTIES (H5JAM-UNJAM-${expectfile} PROPERTIES DEPENDS H5JAM-UNJAM-${expectfile}-clear-objects)
+    ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
+  ENDMACRO (TEST_H5UNJAM_OUTPUT)
+
+  MACRO (CHECKFILE testname testdepends expected actual)
+    # If using memchecker add tests without using scripts
+    IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+      ADD_TEST (
+          NAME H5JAM-${testname}-CHECKFILE-clear-objects
+          COMMAND    ${CMAKE_COMMAND}
+              -E remove
+              ${actual}.new
+              ${actual}.new.err
+              ${actual}.out
+              ${actual}.out.err
+      )
+      SET_TESTS_PROPERTIES (H5JAM-${testname}-CHECKFILE-clear-objects PROPERTIES DEPENDS ${testdepends})
+      ADD_TEST (
+          NAME H5JAM-${testname}-CHECKFILE-H5DMP
+          COMMAND "${CMAKE_COMMAND}"
+              -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
+              -D "TEST_ARGS:STRING=testfiles/${expected}"
+              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
+              -D "TEST_OUTPUT=${actual}.new"
+              -D "TEST_EXPECT=0"
+              -D "TEST_FILTER=(^(HDF5)[^\n]*)"
+              -D "TEST_SKIP_COMPARE=TRUE"
+              -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
+      )
+      SET_TESTS_PROPERTIES (H5JAM-${testname}-CHECKFILE-H5DMP PROPERTIES DEPENDS H5JAM-${testname}-CHECKFILE-clear-objects)
+      ADD_TEST (
+          NAME H5JAM-${testname}-CHECKFILE-H5DMP_CMP
+          COMMAND "${CMAKE_COMMAND}"
+              -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
+              -D "TEST_ARGS:STRING=${actual}"
+              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
+              -D "TEST_OUTPUT=${actual}.out"
+              -D "TEST_EXPECT=0"
+              -D "TEST_FILTER=(^(HDF5)[^\n]*)"
+              -D "TEST_REFERENCE=${actual}.new"
+              -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
+      )
+      SET_TESTS_PROPERTIES (H5JAM-${testname}-CHECKFILE-H5DMP_CMP PROPERTIES DEPENDS H5JAM-${testname}-CHECKFILE-H5DMP)
+    ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+  ENDMACRO(CHECKFILE testname testdepends expected actual)
+
+  MACRO (UNJAMTEST testname setfile infile ufile chkfile outfile)
+    IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+      ADD_TEST (
+          NAME H5JAM-${testname}-UNJAM-SETUP-clear-objects
+          COMMAND ${CMAKE_COMMAND} -E remove ${infile}
+      )
+      ADD_TEST (
+          NAME H5JAM-${testname}-UNJAM-SETUP
+          COMMAND ${CMAKE_COMMAND} -E copy_if_different ${HDF5_TOOLS_H5JAM_SOURCE_DIR}/testfiles/${setfile} ${PROJECT_BINARY_DIR}/${infile}
+      )
+      SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM-SETUP PROPERTIES DEPENDS H5JAM-${testname}-UNJAM-SETUP-clear-objects)
+      ADD_TEST (
+          NAME H5JAM-${testname}-UNJAM-clear-objects
+          COMMAND ${CMAKE_COMMAND} -E remove ${outfile}
+      )
+      SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM-clear-objects PROPERTIES DEPENDS H5JAM-${testname}-UNJAM-SETUP)
+      IF (NOT "${ufile}" STREQUAL "NONE")
+        ADD_TEST (
+            NAME H5JAM-${testname}-UNJAM_D-clear-objects
+            COMMAND ${CMAKE_COMMAND} -E remove ${ufile}
+        )
+        SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM_D-clear-objects PROPERTIES DEPENDS H5JAM-${testname}-UNJAM-clear-objects)
+        ADD_TEST (NAME H5JAM-${testname}-UNJAM COMMAND $<TARGET_FILE:h5unjam> -i ${infile} -u ${ufile} -o ${outfile})
+        SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM PROPERTIES DEPENDS H5JAM-${testname}-UNJAM_D-clear-objects)
+        SET (compare_test ${ufile})
+      ELSE (NOT "${ufile}" STREQUAL "NONE")
+        IF (NOT "${ARGN}" STREQUAL "--delete")
+          ADD_TEST (
+              NAME H5JAM-${testname}-UNJAM_D-clear-objects
+              COMMAND ${CMAKE_COMMAND} -E remove ${outfile}.ufile.txt ${outfile}.ufile.txt.err
+          )
+          SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM_D-clear-objects PROPERTIES DEPENDS H5JAM-${testname}-UNJAM-clear-objects)
+          ADD_TEST (
+              NAME H5JAM-${testname}-UNJAM
+              COMMAND "${CMAKE_COMMAND}"
+                  -D "TEST_PROGRAM=$<TARGET_FILE:h5unjam>"
+                  -D "TEST_ARGS:STRING=-i;${infile};-o;${outfile}"
+                  -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
+                  -D "TEST_OUTPUT=${outfile}.ufile.txt"
+                  -D "TEST_EXPECT=0"
+                  -D "TEST_SKIP_COMPARE=TRUE"
+                  -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
+          )
+          SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM PROPERTIES DEPENDS H5JAM-${testname}-UNJAM_D-clear-objects)
+          SET (compare_test "${outfile}.ufile.txt")
+        ELSE (NOT "${ARGN}" STREQUAL "--delete")
+          ADD_TEST (NAME H5JAM-${testname}-UNJAM COMMAND $<TARGET_FILE:h5unjam> -i ${infile} -o ${outfile})
+          SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM PROPERTIES DEPENDS H5JAM-${testname}-UNJAM-clear-objects)
+          SET (compare_test "")
+        ENDIF (NOT "${ARGN}" STREQUAL "--delete")
+      ENDIF (NOT "${ufile}" STREQUAL "NONE")
+      IF (NOT "${compare_test}" STREQUAL "")
+        ADD_TEST (
+            NAME H5JAM-${testname}-UNJAM-CHECK_UB_1-clear-objects
+            COMMAND    ${CMAKE_COMMAND}
+                -E remove
+                ${infile}.len.txt
+                ${infile}.cmp
+                ${infile}-ub.cmp
+        )
+        SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM-CHECK_UB_1-clear-objects PROPERTIES DEPENDS "H5JAM-${testname}-UNJAM")
+        ADD_TEST (
+            NAME H5JAM-${testname}-UNJAM-CHECK_UB_1
+            COMMAND "${CMAKE_COMMAND}"
+                -D "TEST_PROGRAM=$<TARGET_FILE:tellub>"
+                -D "TEST_GET_PROGRAM=$<TARGET_FILE:getub>"
+                -D "TEST_CHECKUB=YES"
+                -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
+                -D "TEST_HFILE=${infile}"
+                -D "TEST_UFILE=${compare_test}"
+                -D "TEST_EXPECT=0"
+                -D "TEST_OFILE="
+                -P "${HDF5_RESOURCES_DIR}/userblockTest.cmake"
+        )
+        SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM-CHECK_UB_1 PROPERTIES DEPENDS H5JAM-${testname}-UNJAM-CHECK_UB_1-clear-objects)
+      ENDIF (NOT "${compare_test}" STREQUAL "")
+
+      ADD_TEST (
+          NAME H5JAM-${testname}-UNJAM-CHECK_NOUB
+          COMMAND "${CMAKE_COMMAND}"
+              -D "TEST_PROGRAM=$<TARGET_FILE:tellub>"
+              -D "TEST_GET_PROGRAM=$<TARGET_FILE:getub>"
+              -D "TEST_CHECKUB=NO"
+              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
+              -D "TEST_HFILE=${outfile}"
+              -D "TEST_EXPECT=0"
+              -D "TEST_UFILE=NULL"
+              -D "TEST_OFILE=NULL"
+              -P "${HDF5_RESOURCES_DIR}/userblockTest.cmake"
+      )
+      IF (NOT "${compare_test}" STREQUAL "")
+        SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM-CHECK_NOUB PROPERTIES DEPENDS H5JAM-${testname}-UNJAM-CHECK_UB_1)
+      ELSE (NOT "${compare_test}" STREQUAL "")
+        SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM-CHECK_NOUB PROPERTIES DEPENDS H5JAM-${testname}-UNJAM)
+      ENDIF (NOT "${compare_test}" STREQUAL "")
+
+      CHECKFILE (${testname} "H5JAM-${testname}-UNJAM-CHECK_NOUB" ${chkfile} ${outfile})
+    ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+  ENDMACRO(UNJAMTEST testname infile ufile outfile)
+
+  MACRO (JAMTEST testname jamfile infile chkfile outfile)
+    IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+      ADD_TEST (
+          NAME H5JAM-${testname}-clear-objects
+          COMMAND ${CMAKE_COMMAND} -E remove ${outfile} ${infile}.cpy.h5
+      )
+    ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+    ADD_TEST (NAME H5JAM-${testname} COMMAND $<TARGET_FILE:h5jam> -u testfiles/${jamfile} -i testfiles/${infile} -o ${outfile} ${ARGN})
+    IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+      SET_TESTS_PROPERTIES (H5JAM-${testname} PROPERTIES DEPENDS H5JAM-${testname}-clear-objects)
+      SET (compare_test ${outfile})
+      SET (compare_orig testfiles/${infile})
+      IF ("${ARGN}" STREQUAL "--clobber")
+        SET (compare_orig "")
+      ENDIF ("${ARGN}" STREQUAL "--clobber")
+
+      ADD_TEST (
+          NAME H5JAM-${testname}-CHECK_UB_1-clear-objects
+          COMMAND    ${CMAKE_COMMAND}
+              -E remove
+              ${compare_test}.len.txt
+              ${compare_test}.cmp
+              ${compare_test}-ub.cmp
+      )
+      SET_TESTS_PROPERTIES (H5JAM-${testname}-CHECK_UB_1-clear-objects PROPERTIES DEPENDS "H5JAM-${testname}")
+      ADD_TEST (
+          NAME H5JAM-${testname}-CHECK_UB_1
+          COMMAND "${CMAKE_COMMAND}"
+              -D "TEST_PROGRAM=$<TARGET_FILE:tellub>"
+              -D "TEST_GET_PROGRAM=$<TARGET_FILE:getub>"
+              -D "TEST_CHECKUB=YES"
+              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
+              -D "TEST_HFILE=${compare_test}"
+              -D "TEST_UFILE=testfiles/${jamfile}"
+              -D "TEST_EXPECT=0"
+              -D "TEST_OFILE=${compare_orig}"
+              -P "${HDF5_RESOURCES_DIR}/userblockTest.cmake"
+      )
+      SET_TESTS_PROPERTIES (H5JAM-${testname}-CHECK_UB_1 PROPERTIES DEPENDS H5JAM-${testname}-CHECK_UB_1-clear-objects)
+      CHECKFILE (${testname} "H5JAM-${testname}-CHECK_UB_1" ${chkfile} ${outfile})
+    ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+  ENDMACRO (JAMTEST testname jamfile infile outfile)
+
+  MACRO (JAMTEST_NONE testname jamfile infile setfile chkfile)
+    IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+      ADD_TEST (
+          NAME H5JAM-${testname}_NONE-clear-objects
+          COMMAND ${CMAKE_COMMAND} -E remove 
+              ${chkfile} ${chkfile}.cpy.h5
+      )
+      ADD_TEST (
+          NAME H5JAM-${testname}_NONE-SETUP
+          COMMAND ${CMAKE_COMMAND} -E copy_if_different testfiles/${setfile} ${chkfile}
+      )
+      SET_TESTS_PROPERTIES (H5JAM-${testname}_NONE-SETUP PROPERTIES DEPENDS H5JAM-${testname}_NONE-clear-objects)
+
+      ADD_TEST (
+          NAME H5JAM-${testname}_NONE_COPY
+          COMMAND ${CMAKE_COMMAND} -E copy_if_different ${chkfile} ${chkfile}.cpy.h5
+      )
+      SET_TESTS_PROPERTIES (H5JAM-${testname}_NONE_COPY PROPERTIES DEPENDS H5JAM-${testname}_NONE-SETUP)
+
+      ADD_TEST (NAME H5JAM-${testname}_NONE COMMAND $<TARGET_FILE:h5jam> -u testfiles/${jamfile} -i ${chkfile} ${ARGN})
+      SET_TESTS_PROPERTIES (H5JAM-${testname}_NONE PROPERTIES DEPENDS H5JAM-${testname}_NONE_COPY)
+
+      SET (compare_test ${chkfile})
+      SET (compare_orig ${chkfile}.cpy.h5)
+      IF ("${ARGN}" STREQUAL "--clobber")
+        SET (compare_orig "")
+      ENDIF ("${ARGN}" STREQUAL "--clobber")
+
+      ADD_TEST (
+          NAME H5JAM-${testname}_NONE-CHECK_UB_1-clear-objects
+          COMMAND    ${CMAKE_COMMAND}
+              -E remove
+              ${compare_test}.len.txt
+              ${compare_test}.cmp
+              ${compare_test}-ub.cmp
+      )
+      SET_TESTS_PROPERTIES (H5JAM-${testname}_NONE-CHECK_UB_1-clear-objects PROPERTIES DEPENDS "H5JAM-${testname}_NONE")
+      ADD_TEST (
+          NAME H5JAM-${testname}_NONE-CHECK_UB_1
+          COMMAND "${CMAKE_COMMAND}"
+              -D "TEST_PROGRAM=$<TARGET_FILE:tellub>"
+              -D "TEST_GET_PROGRAM=$<TARGET_FILE:getub>"
+              -D "TEST_CHECKUB=YES"
+              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
+              -D "TEST_HFILE=${compare_test}"
+              -D "TEST_UFILE=testfiles/${jamfile}"
+              -D "TEST_EXPECT=0"
+              -D "TEST_OFILE=${compare_orig}"
+              -P "${HDF5_RESOURCES_DIR}/userblockTest.cmake"
+      )
+      SET_TESTS_PROPERTIES (H5JAM-${testname}_NONE-CHECK_UB_1 PROPERTIES DEPENDS H5JAM-${testname}_NONE-CHECK_UB_1-clear-objects)
+      CHECKFILE (${testname} "H5JAM-${testname}_NONE-CHECK_UB_1" ${infile} ${chkfile})
+    ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+  ENDMACRO (JAMTEST_NONE testname jamfile infile setfile chkfile)
+
+##############################################################################
+##############################################################################
+###           T H E   T E S T S                                            ###
+##############################################################################
+##############################################################################
+
+#-------------------------------
+# Testing h5jam
+#-------------------------------
+  # help page
+  TEST_H5JAM_OUTPUT(h5jam-help 0 -h)
+
+  # don't allow HDF5 format file as an user block file
+  TEST_H5JAM_OUTPUT(h5jam-ub-nohdf5 1 -i testfiles/tall.h5 -u testfiles/tall.h5 -o tall-tmp.h5)
+
+  JAMTEST (tall_u10 u10.txt tall.h5 tall.h5 ta2.h5)
+  JAMTEST (tall_u511 u511.txt tall.h5 tall.h5 ta3.h5)
+  JAMTEST (tall_u512 u512.txt tall.h5 tall.h5 ta4.h5)
+  JAMTEST (tall_u513 u513.txt tall.h5 tall.h5 ta5.h5)
+
+  JAMTEST_NONE (N_ta_u10 u10.txt tall.h5 tall.h5 ta6.h5)
+  JAMTEST_NONE (N_ta_u511 u511.txt tall.h5 tall.h5 ta7.h5)
+  JAMTEST_NONE (N_ta_u512 u512.txt tall.h5 tall.h5 ta8.h5)
+  JAMTEST_NONE (N_ta_u513 u513.txt tall.h5 tall.h5 ta9.h5)
+
+  JAMTEST (twithub_u10 u10.txt twithub.h5 tall.h5 tax2.h5)
+  JAMTEST (twithub_u511 u511.txt twithub.h5 tall.h5 tax3.h5)
+  JAMTEST (twithub_u512 u512.txt twithub.h5 tall.h5 tax4.h5)
+  JAMTEST (twithub_u513 u513.txt twithub.h5 tall.h5 tax5.h5)
+
+  JAMTEST (twithub513_u10 u10.txt twithub513.h5 tall.h5 tax6.h5)
+  JAMTEST (twithub513_u511 u511.txt twithub513.h5 tall.h5 tax7.h5)
+  JAMTEST (twithub513_u512 u512.txt twithub513.h5 tall.h5 tax8.h5)
+  JAMTEST (twithub513_u513 u513.txt twithub513.h5 tall.h5 tax9.h5)
+
+  JAMTEST (twithub_u10_c u10.txt twithub.h5 tall.h5 taz2.h5 --clobber)
+  JAMTEST (twithub_u511_c u511.txt twithub.h5 tall.h5 taz3.h5 --clobber)
+  JAMTEST (twithub_u512_c u512.txt twithub.h5 tall.h5 taz4.h5 --clobber)
+  JAMTEST (twithub_u513_c u513.txt twithub.h5 tall.h5 taz5.h5 --clobber)
+
+  JAMTEST (twithub513_u10_c u10.txt twithub513.h5 tall.h5 taz6.h5 --clobber)
+  JAMTEST (twithub513_u511_c u511.txt twithub513.h5 tall.h5 taz7.h5 --clobber)
+  JAMTEST (twithub513_u512_c u512.txt twithub513.h5 tall.h5 taz8.h5 --clobber)
+  JAMTEST (twithub513_u513_c u513.txt twithub513.h5 tall.h5 taz9.h5 --clobber)
+
+  JAMTEST_NONE (N_twithub_u10_c u10.txt tall.h5 twithub.h5 tay2.h5 --clobber)
+  JAMTEST_NONE (N_twithub_u511_c u511.txt tall.h5 twithub.h5 tay3.h5 --clobber)
+  JAMTEST_NONE (N_twithub_u512_c u512.txt tall.h5 twithub.h5 tay4.h5 --clobber)
+  JAMTEST_NONE (N_twithub_u513_c u513.txt tall.h5 twithub.h5 tay5.h5 --clobber)
+
+  JAMTEST_NONE (N_twithub513_u10_c u10.txt tall.h5 twithub513.h5 tay6.h5 --clobber)
+  JAMTEST_NONE (N_twithub513_u511_c u511.txt tall.h5 twithub513.h5 tay7.h5 --clobber)
+  JAMTEST_NONE (N_twithub513_u512_c u512.txt tall.h5 twithub513.h5 tay8.h5 --clobber)
+  JAMTEST_NONE (N_twithub513_u513_c u513.txt tall.h5 twithub513.h5 tay9.h5 --clobber)
+
+#-------------------------------
+# Testing h5unjam
+#-------------------------------
+  # help page
+  TEST_H5UNJAM_OUTPUT(h5unjam-help 0 -h)
+
+  UNJAMTEST (twithub_tall twithub.h5 tai1.h5 o10.txt tall.h5 taa1.h5)
+  UNJAMTEST (twithub513_tall twithub513.h5 tai2.h5 o512.txt tall.h5 taa2.h5)
+
+  UNJAMTEST (N_twithub_tall twithub.h5 tai3.h5 NONE tall.h5 taa3.h5)
+  UNJAMTEST (N_twithub513_tall twithub513.h5 tai4.h5 NONE tall.h5 taa4.h5)
+
+  UNJAMTEST (D_twithub_tall twithub.h5 taj2.h5 NONE tall.h5 tac2.h5 --delete)
+  UNJAMTEST (D_twithub513_tall twithub513.h5 taj3.h5 NONE tall.h5 tac3.h5 --delete)
diff --git a/tools/h5jam/h5unjam.c b/tools/h5jam/h5unjam.c
index 9641378..7b4dc91 100644
--- a/tools/h5jam/h5unjam.c
+++ b/tools/h5jam/h5unjam.c
@@ -27,7 +27,7 @@
 
 hsize_t write_pad( int , hsize_t );
 hsize_t compute_pad( hsize_t );
-herr_t copy_to_file( int , int , ssize_t, ssize_t );
+herr_t copy_to_file( FILE *, FILE * , ssize_t, ssize_t );
 
 int do_delete = FALSE;
 char *output_file = NULL;
@@ -137,20 +137,28 @@ static int
 parse_command_line(int argc, const char *argv[])
 {
     int opt = FALSE;
-
-    /* parse command line options */
+	
+   /* parse command line options */
     while ((opt = get_option(argc, argv, s_opts, l_opts)) != EOF) {
         switch((char)opt) {
             case 'o':
                 output_file = HDstrdup(opt_arg);
-                break;
+				if (output_file)
+				    h5tools_set_data_output_file(output_file, 1);
+	            break;
 
             case 'i':
                 input_file = HDstrdup(opt_arg);
-                break;
+				if (input_file)
+   				    h5tools_set_input_file(input_file, 1);
+	            break;;
 
             case 'u':
                 ub_file = HDstrdup(opt_arg);
+				if (ub_file)
+				    h5tools_set_output_file(ub_file, 1);
+				else 
+				    rawoutstream = stdout;			
                 break;
 
             case 'd':
@@ -205,9 +213,6 @@ done:
 int
 main(int argc, const char *argv[])
 {
-    int                 ifid = -1;
-    int                 ufid = -1;
-    int                 h5fid = -1;
     void               *edata;
     H5E_auto2_t         func;
     hid_t               ifile = -1;
@@ -222,24 +227,24 @@ main(int argc, const char *argv[])
     h5tools_setprogname(PROGRAMNAME);
     h5tools_setstatus(EXIT_SUCCESS);
 
-    /* Disable error reporting */
+    /* Disable error reporting  */
     H5Eget_auto2(H5E_DEFAULT, &func, &edata);
     H5Eset_auto2(H5E_DEFAULT, NULL, NULL);
 
-    /* Initialize h5tools lib */
+    /* Initialize h5tools lib  */
     h5tools_init();
 
     if(EXIT_FAILURE == parse_command_line(argc, argv))
         goto done;
 
     if (input_file == NULL) {
-        /* no user block */
+        /* no user block  */
         error_msg("missing arguemnt for HDF5 file input.\n");
         help_ref_msg(stderr);
         h5tools_setstatus(EXIT_FAILURE);
         goto done;
     }
-
+  
     testval = H5Fis_accessible(input_file, H5P_DEFAULT);
 
     if (testval <= 0) {
@@ -283,14 +288,7 @@ main(int argc, const char *argv[])
         goto done;
     }
 
-    ifid = HDopen(input_file,O_RDONLY,0);
-    if(ifid < 0) {
-        error_msg("unable to open input HDF5 file \"%s\"\n", input_file);
-        h5tools_setstatus(EXIT_FAILURE);
-        goto done;
-    }
-
-    res = HDfstat(ifid, &sbuf);
+    res = HDfstat(HDfileno(rawinstream), &sbuf);
     if(res < 0) {
         error_msg("Can't stat file \"%s\"\n", input_file);
         h5tools_setstatus(EXIT_FAILURE);
@@ -305,43 +303,15 @@ main(int argc, const char *argv[])
         goto done;
     }
 
-    if (ub_file == NULL) {
-        /* write to sdtout */
-        ufid = HDdup(1);
-    } 
-    else {
-        ufid = HDopen(ub_file,O_WRONLY|O_CREAT|O_TRUNC, 0644 );
-
-        if (ufid < 0) {
-            error_msg("unable to open user block file for output\"%s\"\n", ub_file);
-            h5tools_setstatus(EXIT_FAILURE);
-            goto done;
-        }
-    }
-
     if (output_file == NULL) {
-        h5fid = HDopen(input_file,O_WRONLY, 0);
-
-        if (h5fid < 0) {
             error_msg("unable to open output HDF5 file \"%s\"\n", input_file);
             h5tools_setstatus(EXIT_FAILURE);
             goto done;
-        }
     } 
-    else {
-        h5fid = HDopen(output_file,O_WRONLY|O_CREAT|O_TRUNC, 0644 );
-
-        if (h5fid < 0) {
-            error_msg("unable to open output HDF5 file \"%s\"\n", output_file);
-            h5tools_setstatus(EXIT_FAILURE);
-            goto done;
-        }
-    }
-
 
-    /* copy from 0 to 'usize - 1' into ufid */
+    /* copy from 0 to 'usize - 1' into ufid  */
     if (!do_delete) {
-        if(copy_to_file(ifid, ufid, 0, (ssize_t) usize) < 0) {
+        if(copy_to_file(rawinstream, rawoutstream, 0, (ssize_t) usize) < 0) {
             error_msg("unable to copy user block to output file \"%s\"\n", ub_file);
             h5tools_setstatus(EXIT_FAILURE);
             goto done;
@@ -349,34 +319,25 @@ main(int argc, const char *argv[])
     }
 
     /* copy from usize to end of file into h5fid,
-     * starting at end of user block if present
-     */
-    if(copy_to_file(ifid, h5fid, (ssize_t) usize, (ssize_t)(fsize - (ssize_t)usize)) < 0) {
+     * starting at end of user block if present */
+   if(copy_to_file(rawinstream, rawdatastream, (ssize_t) usize, (ssize_t)(fsize - (ssize_t)usize)) < 0) {
         error_msg("unable to copy hdf5 data to output file \"%s\"\n", output_file);
         h5tools_setstatus(EXIT_FAILURE);
         goto done;
     }
-
+ 
 done:
     if(input_file)
         HDfree(input_file);
+		
     if(output_file)
         HDfree(output_file);
+		
     if(ub_file) {
         HDfree(ub_file);
-        if(ufid >= 0)
-            status = HDclose(ufid);
-            HDassert(status >= 0);
-    }
-
-    if(h5fid >= 0) {
-        status = HDclose(h5fid);
-        HDassert(status >= 0);
-    }
-    if(ifid >= 0) {
-        status = HDclose(ifid);
-        HDassert(status >= 0);
     }
+	   
+    h5tools_close();
 
     return h5tools_getstatus();
 }
@@ -388,54 +349,60 @@ done:
  *  Returns 0 on success, -1 on failure.
  */
 herr_t
-copy_to_file( int infid, int ofid, ssize_t where, ssize_t how_much )
+copy_to_file( FILE *infid, FILE *ofid, ssize_t _where, ssize_t how_much )
 {
     static char buf[COPY_BUF_SIZE];
+    off_t where = (off_t)_where;
     off_t to;
     off_t from;
-    ssize_t nchars = -1;
-    ssize_t wnchars = -1;
     herr_t ret_value = 0;
 
     /* nothing to copy */
     if(how_much <= 0)
         goto done;
 
+    /* rewind */
+    HDfseek(infid, 0L, 0);
+
     from = where;
     to = 0;
-
     while(how_much > 0) {
-        /* Seek to correct position in input file */
-        HDlseek(infid,from,SEEK_SET);
+        size_t bytes_in        = 0;    /* # of bytes to read       */
+        size_t bytes_read      = 0;    /* # of bytes actually read */
+        size_t bytes_wrote     = 0;    /* # of bytes written   */
 
-        /* Read data to buffer */
         if (how_much > COPY_BUF_SIZE)
-            nchars = HDread(infid,buf,(unsigned)COPY_BUF_SIZE);
+            bytes_in = COPY_BUF_SIZE;
         else
-            nchars = HDread(infid,buf,(unsigned)how_much);
-        if(nchars < 0) {
+            bytes_in = how_much;
+
+			/* Seek to correct position in input file */
+        HDfseek(infid, from, SEEK_SET);
+
+        /* Read data to buffer */
+        bytes_read = HDfread(buf, (size_t)1, bytes_in, infid);
+        if(0 == bytes_read && HDferror(infid)) {
             ret_value = -1;
             goto done;
         } /* end if */
+        if(0 == bytes_read && HDfeof(infid)) {
+            goto done;
+        } /* end if */
 
         /* Seek to correct position in output file */
-        HDlseek(ofid,to,SEEK_SET);
+        HDfseek(ofid, to, SEEK_SET);
 
         /* Update positions/size */
-        how_much -= nchars;
-        from += nchars;
-        to += nchars;
-
-        /* Write nchars bytes to output file */
-        wnchars = nchars;
-        while(nchars > 0) {
-            wnchars = HDwrite(ofid,buf,(unsigned)nchars);
-            if(wnchars < 0) {
-                ret_value = -1;
-                goto done;
-            } /* end if */
-            nchars -= wnchars;
-        } /* end while */
+        how_much -= bytes_read;
+        from += bytes_read;
+        to += bytes_read;
+
+       /* Write nchars bytes to output file */
+		bytes_wrote = HDfwrite(buf, (size_t)1, bytes_read, ofid);
+		if(bytes_wrote != bytes_read || (0 == bytes_wrote && HDferror(ofid))) { /* error */
+			ret_value = -1;
+			goto done;
+		} /* end if */
     } /* end while */
 
 done: