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authorAllen Byrne <byrn@hdfgroup.org>2020-09-30 14:27:10 (GMT)
committerAllen Byrne <byrn@hdfgroup.org>2020-09-30 14:27:10 (GMT)
commitb2d661b508a7fc7a2592c13bc6bdc175551f075d (patch)
tree13baeb0d83a7c2a4c6299993c182b1227c2f6114 /tools/lib/h5trav.c
parent29ab58b58dce556639ea3154e262895773a8a8df (diff)
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Clang-format of source files
Diffstat (limited to 'tools/lib/h5trav.c')
-rw-r--r--tools/lib/h5trav.c542
1 files changed, 259 insertions, 283 deletions
diff --git a/tools/lib/h5trav.c b/tools/lib/h5trav.c
index dc7e27d..74357d0 100644
--- a/tools/lib/h5trav.c
+++ b/tools/lib/h5trav.c
@@ -11,7 +11,6 @@
* help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
-
#include "h5trav.h"
#include "h5tools.h"
#include "H5private.h"
@@ -22,32 +21,32 @@
*/
typedef struct trav_addr_path_t {
H5O_token_t token;
- char *path;
+ char * path;
} trav_addr_path_t;
typedef struct trav_addr_t {
- size_t nalloc;
- size_t nused;
+ size_t nalloc;
+ size_t nused;
trav_addr_path_t *objs;
} trav_addr_t;
typedef struct {
- h5trav_obj_func_t visit_obj; /* Callback for visiting objects */
- h5trav_lnk_func_t visit_lnk; /* Callback for visiting links */
- void *udata; /* User data to pass to callbacks */
+ h5trav_obj_func_t visit_obj; /* Callback for visiting objects */
+ h5trav_lnk_func_t visit_lnk; /* Callback for visiting links */
+ void * udata; /* User data to pass to callbacks */
} trav_visitor_t;
typedef struct {
- trav_addr_t *seen; /* List of addresses seen already */
- const trav_visitor_t *visitor; /* Information for visiting each link/object */
- hbool_t is_absolute; /* Whether the traversal has absolute paths */
- const char *base_grp_name; /* Name of the group that serves as the base
- * for iteration */
- unsigned fields; /* Fields needed in H5O_info2_t struct */
+ trav_addr_t * seen; /* List of addresses seen already */
+ const trav_visitor_t *visitor; /* Information for visiting each link/object */
+ hbool_t is_absolute; /* Whether the traversal has absolute paths */
+ const char * base_grp_name; /* Name of the group that serves as the base
+ * for iteration */
+ unsigned fields; /* Fields needed in H5O_info2_t struct */
} trav_ud_traverse_t;
typedef struct {
- hid_t fid; /* File ID being traversed */
+ hid_t fid; /* File ID being traversed */
} trav_print_udata_t;
typedef struct trav_path_op_data_t {
@@ -56,26 +55,22 @@ typedef struct trav_path_op_data_t {
/* format for hsize_t */
#ifdef H5TRAV_PRINT_SPACE
-#define HSIZE_T_FORMAT "%" H5_PRINTF_LL_WIDTH "u"
+#define HSIZE_T_FORMAT "%" H5_PRINTF_LL_WIDTH "u"
#endif /* H5TRAV_PRINT_SPACE */
/*-------------------------------------------------------------------------
* local functions
*-------------------------------------------------------------------------
*/
-static void trav_table_add(trav_table_t *table,
- const char *objname,
- const H5O_info2_t *oinfo);
+static void trav_table_add(trav_table_t *table, const char *objname, const H5O_info2_t *oinfo);
-static void trav_table_addlink(trav_table_t *table,
- const H5O_token_t *obj_token,
- const char *path);
+static void trav_table_addlink(trav_table_t *table, const H5O_token_t *obj_token, const char *path);
/*-------------------------------------------------------------------------
* local variables
*-------------------------------------------------------------------------
*/
-static H5_index_t trav_index_by = H5_INDEX_NAME;
+static H5_index_t trav_index_by = H5_INDEX_NAME;
static H5_iter_order_t trav_index_order = H5_ITER_INC;
static int trav_verbosity = 0;
@@ -91,7 +86,7 @@ static int trav_verbosity = 0;
void
h5trav_set_index(H5_index_t print_index_by, H5_iter_order_t print_index_order)
{
- trav_index_by = print_index_by;
+ trav_index_by = print_index_by;
trav_index_order = print_index_order;
}
@@ -114,7 +109,6 @@ h5trav_set_verbose(int print_verbose)
*-------------------------------------------------------------------------
*/
-
/*-------------------------------------------------------------------------
* Function: trav_token_add
*
@@ -126,12 +120,14 @@ h5trav_set_verbose(int print_verbose)
static void
trav_token_add(trav_addr_t *visited, H5O_token_t *token, const char *path)
{
- size_t idx; /* Index of address to use */
+ size_t idx; /* Index of address to use */
/* Allocate space if necessary */
- if(visited->nused == visited->nalloc) {
- visited->nalloc = MAX(1, visited->nalloc * 2);;
- visited->objs = (trav_addr_path_t *)HDrealloc(visited->objs, visited->nalloc * sizeof(trav_addr_path_t));
+ if (visited->nused == visited->nalloc) {
+ visited->nalloc = MAX(1, visited->nalloc * 2);
+ ;
+ visited->objs =
+ (trav_addr_path_t *)HDrealloc(visited->objs, visited->nalloc * sizeof(trav_addr_path_t));
} /* end if */
/* Append it */
@@ -140,7 +136,6 @@ trav_token_add(trav_addr_t *visited, H5O_token_t *token, const char *path)
visited->objs[idx].path = HDstrdup(path);
} /* end trav_token_add() */
-
/*-------------------------------------------------------------------------
* Function: trav_token_visited
*
@@ -152,23 +147,22 @@ trav_token_add(trav_addr_t *visited, H5O_token_t *token, const char *path)
H5_ATTR_PURE static const char *
trav_token_visited(hid_t loc_id, trav_addr_t *visited, H5O_token_t *token)
{
- size_t u; /* Local index variable */
- int token_cmp;
+ size_t u; /* Local index variable */
+ int token_cmp;
/* Look for address */
- for(u = 0; u < visited->nused; u++) {
+ for (u = 0; u < visited->nused; u++) {
/* Check for address already in array */
- if(H5Otoken_cmp(loc_id, &visited->objs[u].token, token, &token_cmp) < 0)
+ if (H5Otoken_cmp(loc_id, &visited->objs[u].token, token, &token_cmp) < 0)
return NULL;
- if(!token_cmp)
- return(visited->objs[u].path);
+ if (!token_cmp)
+ return (visited->objs[u].path);
}
/* Didn't find object token */
- return(NULL);
+ return (NULL);
} /* end trav_token_visited() */
-
/*-------------------------------------------------------------------------
* Function: traverse_cb
*
@@ -176,23 +170,23 @@ trav_token_visited(hid_t loc_id, trav_addr_t *visited, H5O_token_t *token)
*-------------------------------------------------------------------------
*/
static herr_t
-traverse_cb(hid_t loc_id, const char *path, const H5L_info2_t *linfo,
- void *_udata)
+traverse_cb(hid_t loc_id, const char *path, const H5L_info2_t *linfo, void *_udata)
{
- trav_ud_traverse_t *udata = (trav_ud_traverse_t *)_udata; /* User data */
- char *new_name = NULL;
- const char *full_name;
- const char *already_visited = NULL; /* Whether the link/object was already visited */
+ trav_ud_traverse_t *udata = (trav_ud_traverse_t *)_udata; /* User data */
+ char * new_name = NULL;
+ const char * full_name;
+ const char * already_visited = NULL; /* Whether the link/object was already visited */
/* Create the full path name for the link */
- if(udata->is_absolute) {
- size_t base_len = HDstrlen(udata->base_grp_name);
- size_t add_slash = base_len ? ((udata->base_grp_name)[base_len - 1] != '/') : 1;
- size_t new_name_len = base_len + add_slash + HDstrlen(path) + 1 + 3; /* Extra "+3" to quiet GCC warning - 2019/07/05, QAK */
-
- if(NULL == (new_name = (char*)HDmalloc(new_name_len)))
- return(H5_ITER_ERROR);
- if(add_slash)
+ if (udata->is_absolute) {
+ size_t base_len = HDstrlen(udata->base_grp_name);
+ size_t add_slash = base_len ? ((udata->base_grp_name)[base_len - 1] != '/') : 1;
+ size_t new_name_len = base_len + add_slash + HDstrlen(path) + 1 +
+ 3; /* Extra "+3" to quiet GCC warning - 2019/07/05, QAK */
+
+ if (NULL == (new_name = (char *)HDmalloc(new_name_len)))
+ return (H5_ITER_ERROR);
+ if (add_slash)
HDsnprintf(new_name, new_name_len, "%s/%s", udata->base_grp_name, path);
else
HDsnprintf(new_name, new_name_len, "%s%s", udata->base_grp_name, path);
@@ -202,48 +196,47 @@ traverse_cb(hid_t loc_id, const char *path, const H5L_info2_t *linfo,
full_name = path;
/* Perform the correct action for different types of links */
- if(linfo->type == H5L_TYPE_HARD) {
+ if (linfo->type == H5L_TYPE_HARD) {
H5O_info2_t oinfo;
/* Get information about the object */
- if(H5Oget_info_by_name3(loc_id, path, &oinfo, udata->fields, H5P_DEFAULT) < 0) {
- if(new_name)
+ if (H5Oget_info_by_name3(loc_id, path, &oinfo, udata->fields, H5P_DEFAULT) < 0) {
+ if (new_name)
HDfree(new_name);
- return(H5_ITER_ERROR);
+ return (H5_ITER_ERROR);
} /* end if */
/* If the object has multiple links, add it to the list of addresses
* already visited, if it isn't there already
*/
- if(oinfo.rc > 1)
- if(NULL == (already_visited = trav_token_visited(loc_id, udata->seen, &oinfo.token)))
+ if (oinfo.rc > 1)
+ if (NULL == (already_visited = trav_token_visited(loc_id, udata->seen, &oinfo.token)))
trav_token_add(udata->seen, &oinfo.token, full_name);
/* Make 'visit object' callback */
- if(udata->visitor->visit_obj)
- if((*udata->visitor->visit_obj)(full_name, &oinfo, already_visited, udata->visitor->udata) < 0) {
- if(new_name)
+ if (udata->visitor->visit_obj)
+ if ((*udata->visitor->visit_obj)(full_name, &oinfo, already_visited, udata->visitor->udata) < 0) {
+ if (new_name)
HDfree(new_name);
- return(H5_ITER_ERROR);
+ return (H5_ITER_ERROR);
} /* end if */
- } /* end if */
+ } /* end if */
else {
/* Make 'visit link' callback */
- if(udata->visitor->visit_lnk)
- if((*udata->visitor->visit_lnk)(full_name, linfo, udata->visitor->udata) < 0) {
- if(new_name)
+ if (udata->visitor->visit_lnk)
+ if ((*udata->visitor->visit_lnk)(full_name, linfo, udata->visitor->udata) < 0) {
+ if (new_name)
HDfree(new_name);
- return(H5_ITER_ERROR);
+ return (H5_ITER_ERROR);
} /* end if */
- } /* end else */
+ } /* end else */
- if(new_name)
+ if (new_name)
HDfree(new_name);
- return(H5_ITER_CONT);
+ return (H5_ITER_CONT);
} /* end traverse_cb() */
-
/*-------------------------------------------------------------------------
* Function: traverse
*
@@ -255,68 +248,69 @@ traverse_cb(hid_t loc_id, const char *path, const H5L_info2_t *linfo,
*-------------------------------------------------------------------------
*/
static int
-traverse(hid_t file_id, const char *grp_name, hbool_t visit_start,
- hbool_t recurse, const trav_visitor_t *visitor, unsigned fields)
+traverse(hid_t file_id, const char *grp_name, hbool_t visit_start, hbool_t recurse,
+ const trav_visitor_t *visitor, unsigned fields)
{
- H5O_info2_t oinfo; /* Object info for starting group */
+ H5O_info2_t oinfo; /* Object info for starting group */
int ret_value = 0;
/* Get info for starting object */
- if(H5Oget_info_by_name3(file_id, grp_name, &oinfo, fields, H5P_DEFAULT) < 0)
+ if (H5Oget_info_by_name3(file_id, grp_name, &oinfo, fields, H5P_DEFAULT) < 0)
H5TOOLS_GOTO_ERROR((-1), "H5Oget_info_by_name failed");
/* Visit the starting object */
- if(visit_start && visitor->visit_obj)
+ if (visit_start && visitor->visit_obj)
(*visitor->visit_obj)(grp_name, &oinfo, NULL, visitor->udata);
/* Go visiting, if the object is a group */
- if(oinfo.type == H5O_TYPE_GROUP) {
- trav_addr_t seen; /* List of addresses seen */
- trav_ud_traverse_t udata; /* User data for iteration callback */
+ if (oinfo.type == H5O_TYPE_GROUP) {
+ trav_addr_t seen; /* List of addresses seen */
+ trav_ud_traverse_t udata; /* User data for iteration callback */
/* Init addresses seen */
seen.nused = seen.nalloc = 0;
- seen.objs = NULL;
+ seen.objs = NULL;
/* Check for multiple links to top group */
- if(oinfo.rc > 1)
+ if (oinfo.rc > 1)
trav_token_add(&seen, &oinfo.token, grp_name);
/* Set up user data structure */
- udata.seen = &seen;
- udata.visitor = visitor;
- udata.is_absolute = (*grp_name == '/');
+ udata.seen = &seen;
+ udata.visitor = visitor;
+ udata.is_absolute = (*grp_name == '/');
udata.base_grp_name = grp_name;
- udata.fields = fields;
+ udata.fields = fields;
/* Check for iteration of links vs. visiting all links recursively */
- if(recurse) {
+ if (recurse) {
/* Visit all links in group, recursively */
- if(H5Lvisit_by_name2(file_id, grp_name, trav_index_by, trav_index_order, traverse_cb, &udata, H5P_DEFAULT) < 0)
+ if (H5Lvisit_by_name2(file_id, grp_name, trav_index_by, trav_index_order, traverse_cb, &udata,
+ H5P_DEFAULT) < 0)
H5TOOLS_GOTO_ERROR((-1), "H5Lvisit_by_name failed");
} /* end if */
else {
/* Iterate over links in group */
- if(H5Literate_by_name2(file_id, grp_name, trav_index_by, trav_index_order, NULL, traverse_cb, &udata, H5P_DEFAULT) < 0)
+ if (H5Literate_by_name2(file_id, grp_name, trav_index_by, trav_index_order, NULL, traverse_cb,
+ &udata, H5P_DEFAULT) < 0)
H5TOOLS_GOTO_ERROR((-1), "H5Literate_by_name failed");
} /* end else */
/* Free visited addresses table */
- if(seen.objs) {
- size_t u; /* Local index variable */
+ if (seen.objs) {
+ size_t u; /* Local index variable */
/* Free paths to objects */
- for(u = 0; u < seen.nused; u++)
+ for (u = 0; u < seen.nused; u++)
HDfree(seen.objs[u].path);
HDfree(seen.objs);
} /* end if */
- } /* end if */
+ } /* end if */
done:
return ret_value;
}
-
/*-------------------------------------------------------------------------
* Function: trav_info_add
*
@@ -328,19 +322,20 @@ done:
void
trav_info_add(trav_info_t *info, const char *path, h5trav_type_t obj_type)
{
- size_t idx; /* Index of address to use */
+ size_t idx; /* Index of address to use */
if (info) {
/* Allocate space if necessary */
- if(info->nused == info->nalloc) {
- info->nalloc = MAX(1, info->nalloc * 2);;
+ if (info->nused == info->nalloc) {
+ info->nalloc = MAX(1, info->nalloc * 2);
+ ;
info->paths = (trav_path_t *)HDrealloc(info->paths, info->nalloc * sizeof(trav_path_t));
} /* end if */
/* Append it */
- idx = info->nused++;
- info->paths[idx].path = HDstrdup(path);
- info->paths[idx].type = obj_type;
+ idx = info->nused++;
+ info->paths[idx].path = HDstrdup(path);
+ info->paths[idx].type = obj_type;
info->paths[idx].fileno = 0;
/* Set token to 'undefined' values */
@@ -348,7 +343,6 @@ trav_info_add(trav_info_t *info, const char *path, h5trav_type_t obj_type)
}
} /* end trav_info_add() */
-
/*-------------------------------------------------------------------------
* Function: trav_fileinfo_add
*
@@ -361,9 +355,9 @@ void
trav_fileinfo_add(trav_info_t *info, hid_t loc_id)
{
H5O_info2_t oinfo;
- size_t idx = info->nused - 1;
+ size_t idx = info->nused - 1;
- if(info->paths[idx].path && HDstrcmp(info->paths[idx].path, "."))
+ if (info->paths[idx].path && HDstrcmp(info->paths[idx].path, "."))
H5Oget_info_by_name3(loc_id, info->paths[idx].path, &oinfo, H5O_INFO_BASIC, H5P_DEFAULT);
else
H5Oget_info3(loc_id, &oinfo, H5O_INFO_BASIC);
@@ -372,7 +366,6 @@ trav_fileinfo_add(trav_info_t *info, hid_t loc_id)
info->paths[idx].fileno = oinfo.fileno;
} /* end trav_fileinfo_add() */
-
/*-------------------------------------------------------------------------
* Function: trav_info_visit_obj
*
@@ -383,10 +376,10 @@ trav_fileinfo_add(trav_info_t *info, hid_t loc_id)
*-------------------------------------------------------------------------
*/
int
-trav_info_visit_obj(const char *path, const H5O_info2_t *oinfo,
- const char H5_ATTR_UNUSED *already_visited, void *udata)
+trav_info_visit_obj(const char *path, const H5O_info2_t *oinfo, const char H5_ATTR_UNUSED *already_visited,
+ void *udata)
{
- size_t idx;
+ size_t idx;
trav_info_t *info_p;
/* Add the object to the 'info' struct */
@@ -394,15 +387,14 @@ trav_info_visit_obj(const char *path, const H5O_info2_t *oinfo,
trav_info_add((trav_info_t *)udata, path, (h5trav_type_t)oinfo->type);
/* set object addr and fileno. These are for checking same object */
- info_p = (trav_info_t *) udata;
- idx = info_p->nused - 1;
+ info_p = (trav_info_t *)udata;
+ idx = info_p->nused - 1;
HDmemcpy(&info_p->paths[idx].obj_token, &oinfo->token, sizeof(H5O_token_t));
info_p->paths[idx].fileno = oinfo->fileno;
- return(0);
+ return (0);
} /* end trav_info_visit_obj() */
-
/*-------------------------------------------------------------------------
* Function: trav_info_visit_lnk
*
@@ -416,12 +408,12 @@ int
trav_info_visit_lnk(const char *path, const H5L_info2_t *linfo, void *udata)
{
/* Add the link to the 'info' struct */
- trav_info_add((trav_info_t *)udata, path, ((linfo->type == H5L_TYPE_SOFT) ? H5TRAV_TYPE_LINK : H5TRAV_TYPE_UDLINK));
+ trav_info_add((trav_info_t *)udata, path,
+ ((linfo->type == H5L_TYPE_SOFT) ? H5TRAV_TYPE_LINK : H5TRAV_TYPE_UDLINK));
- return(0);
+ return (0);
} /* end trav_info_visit_lnk() */
-
/*-------------------------------------------------------------------------
* Function: h5trav_getinfo
*
@@ -435,16 +427,16 @@ trav_info_visit_lnk(const char *path, const H5L_info2_t *linfo, void *udata)
int
h5trav_getinfo(hid_t file_id, trav_info_t *info)
{
- trav_visitor_t info_visitor; /* Visitor structure for trav_info_t's */
+ trav_visitor_t info_visitor; /* Visitor structure for trav_info_t's */
int ret_value = 0;
/* Init visitor structure */
info_visitor.visit_obj = trav_info_visit_obj;
info_visitor.visit_lnk = trav_info_visit_lnk;
- info_visitor.udata = info;
+ info_visitor.udata = info;
/* Traverse all objects in the file, visiting each object & link */
- if(traverse(file_id, "/", TRUE, TRUE, &info_visitor, H5O_INFO_BASIC) < 0)
+ if (traverse(file_id, "/", TRUE, TRUE, &info_visitor, H5O_INFO_BASIC) < 0)
H5TOOLS_GOTO_ERROR((-1), "traverse failed");
done:
@@ -463,23 +455,22 @@ done:
H5_ATTR_PURE ssize_t
h5trav_getindex(const trav_info_t *info, const char *obj)
{
- size_t u; /* Local index variable */
+ size_t u; /* Local index variable */
/* Loop over all paths in 'info' struct, looking for object */
- for(u = 0; u < info->nused; u++) {
+ for (u = 0; u < info->nused; u++) {
/* Check for object name having full path (with leading '/') */
- if(HDstrcmp(obj, info->paths[u].path) == 0)
- return((ssize_t)u);
+ if (HDstrcmp(obj, info->paths[u].path) == 0)
+ return ((ssize_t)u);
/* Check for object name without leading '/' */
- if(HDstrcmp(obj, (info->paths[u].path + 1)) == 0)
- return((ssize_t)u);
+ if (HDstrcmp(obj, (info->paths[u].path + 1)) == 0)
+ return ((ssize_t)u);
} /* end for */
- return((ssize_t)-1);
+ return ((ssize_t)-1);
} /* end h5trav_getindex() */
-
/*-------------------------------------------------------------------------
* Function: trav_info_init
*
@@ -495,19 +486,18 @@ trav_info_init(const char *filename, hid_t fileid, trav_info_t **_info)
/* Init info structure */
info->nused = info->nalloc = 0;
- info->paths = NULL;
- info->fname = filename;
- info->fid = fileid;
+ info->paths = NULL;
+ info->fname = filename;
+ info->fid = fileid;
/* Initialize list of visited symbolic links */
- info->symlink_visited.nused = 0;
- info->symlink_visited.nalloc = 0;
- info->symlink_visited.objs = NULL;
+ info->symlink_visited.nused = 0;
+ info->symlink_visited.nalloc = 0;
+ info->symlink_visited.objs = NULL;
info->symlink_visited.dangle_link = FALSE;
- *_info = info;
+ *_info = info;
} /* end trav_info_init() */
-
/*-------------------------------------------------------------------------
* Function: trav_info_free
*
@@ -517,11 +507,11 @@ trav_info_init(const char *filename, hid_t fileid, trav_info_t **_info)
void
trav_info_free(trav_info_t *info)
{
- size_t u; /* Local index variable */
+ size_t u; /* Local index variable */
- if(info) {
+ if (info) {
/* Free visited symbolic links path and file (if alloc) */
- for(u = 0; u < info->symlink_visited.nused; u++) {
+ for (u = 0; u < info->symlink_visited.nused; u++) {
if (info->symlink_visited.objs[u].file)
HDfree(info->symlink_visited.objs[u].file);
HDfree(info->symlink_visited.objs[u].path);
@@ -529,20 +519,18 @@ trav_info_free(trav_info_t *info)
HDfree(info->symlink_visited.objs);
/* Free path names */
- for(u = 0; u < info->nused; u++)
+ for (u = 0; u < info->nused; u++)
HDfree(info->paths[u].path);
HDfree(info->paths);
HDfree(info);
} /* end if */
} /* end trav_info_free() */
-
/*-------------------------------------------------------------------------
* "h5trav table" public functions. used in h5repack
*-------------------------------------------------------------------------
*/
-
/*-------------------------------------------------------------------------
* Function: trav_table_visit_obj
*
@@ -553,13 +541,12 @@ trav_info_free(trav_info_t *info)
*-------------------------------------------------------------------------
*/
static int
-trav_table_visit_obj(const char *path, const H5O_info2_t *oinfo,
- const char *already_visited, void *udata)
+trav_table_visit_obj(const char *path, const H5O_info2_t *oinfo, const char *already_visited, void *udata)
{
trav_table_t *table = (trav_table_t *)udata;
/* Check if we've already seen this object */
- if(NULL == already_visited)
+ if (NULL == already_visited)
/* add object to table */
trav_table_add(table, path, oinfo);
else
@@ -569,7 +556,6 @@ trav_table_visit_obj(const char *path, const H5O_info2_t *oinfo,
return 0;
} /* end trav_table_visit_obj() */
-
/*-------------------------------------------------------------------------
* Function: trav_table_visit_lnk
*
@@ -588,7 +574,6 @@ trav_table_visit_lnk(const char *path, const H5L_info2_t H5_ATTR_UNUSED *linfo,
return 0;
} /* end trav_table_visit_lnk() */
-
/*-------------------------------------------------------------------------
* Function: h5trav_gettable
*
@@ -601,16 +586,16 @@ trav_table_visit_lnk(const char *path, const H5L_info2_t H5_ATTR_UNUSED *linfo,
int
h5trav_gettable(hid_t fid, trav_table_t *table)
{
- trav_visitor_t table_visitor; /* Visitor structure for trav_table_t's */
+ trav_visitor_t table_visitor; /* Visitor structure for trav_table_t's */
int ret_value = 0;
/* Init visitor structure */
table_visitor.visit_obj = trav_table_visit_obj;
table_visitor.visit_lnk = trav_table_visit_lnk;
- table_visitor.udata = table;
+ table_visitor.udata = table;
/* Traverse all objects in the file, visiting each object & link */
- if(traverse(fid, "/", TRUE, TRUE, &table_visitor, H5O_INFO_BASIC) < 0)
+ if (traverse(fid, "/", TRUE, TRUE, &table_visitor, H5O_INFO_BASIC) < 0)
H5TOOLS_GOTO_ERROR((-1), "traverse failed");
done:
@@ -631,31 +616,31 @@ h5trav_getindext(const char *name, const trav_table_t *table)
{
unsigned int i;
- if(table) {
- for(i = 0; i < table->nobjs; i++) {
+ if (table) {
+ for (i = 0; i < table->nobjs; i++) {
/* Check for object name having full path (with leading '/') */
- if(HDstrcmp(name, table->objs[i].name) == 0)
- return((int)i);
+ if (HDstrcmp(name, table->objs[i].name) == 0)
+ return ((int)i);
/* Check for object name without leading '/' */
- if(HDstrcmp(name, table->objs[i].name + 1) == 0)
- return((int)i);
+ if (HDstrcmp(name, table->objs[i].name + 1) == 0)
+ return ((int)i);
/* search also in the list of links */
- if(table->objs[i].nlinks) {
+ if (table->objs[i].nlinks) {
unsigned int j;
- for ( j=0; j<table->objs[i].nlinks; j++) {
+ for (j = 0; j < table->objs[i].nlinks; j++) {
/* Check for object name having full path (with leading '/') */
- if(HDstrcmp(name, table->objs[i].links[j].new_name) == 0)
- return((int)i);
+ if (HDstrcmp(name, table->objs[i].links[j].new_name) == 0)
+ return ((int)i);
/* Check for object name without leading '/' */
- if(HDstrcmp(name, table->objs[i].links[j].new_name + 1) == 0)
- return((int)i);
+ if (HDstrcmp(name, table->objs[i].links[j].new_name + 1) == 0)
+ return ((int)i);
} /* end for */
- } /* end if */
- } /* end for */
+ } /* end if */
+ } /* end for */
}
return -1;
}
@@ -673,25 +658,25 @@ trav_table_add(trav_table_t *table, const char *path, const H5O_info2_t *oinfo)
{
size_t new_obj;
- if(table) {
- if(table->nobjs == table->size) {
+ if (table) {
+ if (table->nobjs == table->size) {
table->size = MAX(1, table->size * 2);
table->objs = (trav_obj_t *)HDrealloc(table->objs, table->size * sizeof(trav_obj_t));
} /* end if */
new_obj = table->nobjs++;
- if(oinfo)
+ if (oinfo)
HDmemcpy(&table->objs[new_obj].obj_token, &oinfo->token, sizeof(H5O_token_t));
else
/* Set token to 'undefined' values */
table->objs[new_obj].obj_token = H5O_TOKEN_UNDEF;
table->objs[new_obj].flags[0] = table->objs[new_obj].flags[1] = 0;
- table->objs[new_obj].is_same_trgobj = 0;
- table->objs[new_obj].name = (char *)HDstrdup(path);
- table->objs[new_obj].type = oinfo ? (h5trav_type_t)oinfo->type : H5TRAV_TYPE_LINK;
- table->objs[new_obj].nlinks = 0;
+ table->objs[new_obj].is_same_trgobj = 0;
+ table->objs[new_obj].name = (char *)HDstrdup(path);
+ table->objs[new_obj].type = oinfo ? (h5trav_type_t)oinfo->type : H5TRAV_TYPE_LINK;
+ table->objs[new_obj].nlinks = 0;
table->objs[new_obj].sizelinks = 0;
- table->objs[new_obj].links = NULL;
+ table->objs[new_obj].links = NULL;
}
}
@@ -706,37 +691,37 @@ trav_table_add(trav_table_t *table, const char *path, const H5O_info2_t *oinfo)
static void
trav_table_addlink(trav_table_t *table, const H5O_token_t *obj_token, const char *path)
{
- size_t i; /* Local index variable */
- int token_cmp;
+ size_t i; /* Local index variable */
+ int token_cmp;
- if(table) {
- for(i = 0; i < table->nobjs; i++) {
- if(H5Otoken_cmp(table->fid, &table->objs[i].obj_token, obj_token, &token_cmp) < 0)
+ if (table) {
+ for (i = 0; i < table->nobjs; i++) {
+ if (H5Otoken_cmp(table->fid, &table->objs[i].obj_token, obj_token, &token_cmp) < 0)
return;
- if(!token_cmp) {
+ if (!token_cmp) {
size_t n;
/* already inserted? */
- if(HDstrcmp(table->objs[i].name, path) == 0)
+ if (HDstrcmp(table->objs[i].name, path) == 0)
return;
/* allocate space if necessary */
- if(table->objs[i].nlinks == (unsigned)table->objs[i].sizelinks) {
+ if (table->objs[i].nlinks == (unsigned)table->objs[i].sizelinks) {
table->objs[i].sizelinks = MAX(1, table->objs[i].sizelinks * 2);
- table->objs[i].links = (trav_link_t *)HDrealloc(table->objs[i].links, table->objs[i].sizelinks * sizeof(trav_link_t));
+ table->objs[i].links = (trav_link_t *)HDrealloc(
+ table->objs[i].links, table->objs[i].sizelinks * sizeof(trav_link_t));
} /* end if */
/* insert it */
- n = table->objs[i].nlinks++;
+ n = table->objs[i].nlinks++;
table->objs[i].links[n].new_name = (char *)HDstrdup(path);
return;
} /* end if */
- } /* end for */
- } /* end if */
+ } /* end for */
+ } /* end if */
}
-
/*-------------------------------------------------------------------------
* Function: trav_table_addflags
*
@@ -745,15 +730,13 @@ trav_table_addlink(trav_table_t *table, const H5O_token_t *obj_token, const char
* Return: void
*-------------------------------------------------------------------------
*/
-void trav_table_addflags(unsigned *flags,
- char *name,
- h5trav_type_t type,
- trav_table_t *table)
+void
+trav_table_addflags(unsigned *flags, char *name, h5trav_type_t type, trav_table_t *table)
{
size_t new_obj;
- if(table) {
- if(table->nobjs == table->size) {
+ if (table) {
+ if (table->nobjs == table->size) {
table->size = MAX(1, table->size * 2);
table->objs = (trav_obj_t *)HDrealloc(table->objs, table->size * sizeof(trav_obj_t));
} /* end if */
@@ -763,18 +746,17 @@ void trav_table_addflags(unsigned *flags,
/* Set token to 'undefined' values */
table->objs[new_obj].obj_token = H5O_TOKEN_UNDEF;
- table->objs[new_obj].flags[0] = flags[0];
- table->objs[new_obj].flags[1] = flags[1];
+ table->objs[new_obj].flags[0] = flags[0];
+ table->objs[new_obj].flags[1] = flags[1];
table->objs[new_obj].is_same_trgobj = 0;
- table->objs[new_obj].name = (char *)HDstrdup(name);
- table->objs[new_obj].type = type;
- table->objs[new_obj].nlinks = 0;
- table->objs[new_obj].sizelinks = 0;
- table->objs[new_obj].links = NULL;
+ table->objs[new_obj].name = (char *)HDstrdup(name);
+ table->objs[new_obj].type = type;
+ table->objs[new_obj].nlinks = 0;
+ table->objs[new_obj].sizelinks = 0;
+ table->objs[new_obj].links = NULL;
}
}
-
/*-------------------------------------------------------------------------
* Function: trav_table_init
*
@@ -783,19 +765,19 @@ void trav_table_addflags(unsigned *flags,
* Return: void
*-------------------------------------------------------------------------
*/
-void trav_table_init(hid_t fid, trav_table_t **tbl)
+void
+trav_table_init(hid_t fid, trav_table_t **tbl)
{
- trav_table_t* table = (trav_table_t*) HDmalloc(sizeof(trav_table_t));
- if(table) {
- table->fid = fid;
- table->size = 0;
+ trav_table_t *table = (trav_table_t *)HDmalloc(sizeof(trav_table_t));
+ if (table) {
+ table->fid = fid;
+ table->size = 0;
table->nobjs = 0;
- table->objs = NULL;
+ table->objs = NULL;
}
*tbl = table;
}
-
/*-------------------------------------------------------------------------
* Function: trav_table_free
*
@@ -804,23 +786,24 @@ void trav_table_init(hid_t fid, trav_table_t **tbl)
* Return: void
*-------------------------------------------------------------------------
*/
-void trav_table_free(trav_table_t *table)
+void
+trav_table_free(trav_table_t *table)
{
- if(table) {
- if(table->objs) {
+ if (table) {
+ if (table->objs) {
unsigned int i;
- for(i = 0; i < table->nobjs; i++) {
- HDfree(table->objs[i].name );
- if(table->objs[i].nlinks) {
+ for (i = 0; i < table->nobjs; i++) {
+ HDfree(table->objs[i].name);
+ if (table->objs[i].nlinks) {
unsigned int j;
- for(j = 0; j < table->objs[i].nlinks; j++)
+ for (j = 0; j < table->objs[i].nlinks; j++)
HDfree(table->objs[i].links[j].new_name);
HDfree(table->objs[i].links);
} /* end if */
- } /* end for */
+ } /* end for */
HDfree(table->objs);
} /* end if */
HDfree(table);
@@ -830,39 +813,40 @@ void trav_table_free(trav_table_t *table)
static herr_t
trav_attr(hid_t
#ifndef H5TRAV_PRINT_SPACE
- H5_ATTR_UNUSED
+ H5_ATTR_UNUSED
#endif /* H5TRAV_PRINT_SPACE */
- obj, const char *attr_name, const H5A_info_t H5_ATTR_UNUSED *ainfo, void *_op_data)
+ obj,
+ const char *attr_name, const H5A_info_t H5_ATTR_UNUSED *ainfo, void *_op_data)
{
trav_path_op_data_t *op_data = (trav_path_op_data_t *)_op_data;
- const char *buf = op_data->path;
+ const char * buf = op_data->path;
- if((strlen(buf)==1) && (*buf=='/'))
+ if ((strlen(buf) == 1) && (*buf == '/'))
HDprintf(" %-10s %s%s", "attribute", buf, attr_name);
else
HDprintf(" %-10s %s/%s", "attribute", buf, attr_name);
#ifdef H5TRAV_PRINT_SPACE
- if(trav_verbosity < 2) {
+ if (trav_verbosity < 2) {
#endif
HDprintf("\n");
#ifdef H5TRAV_PRINT_SPACE
}
else {
- hid_t attr = H5I_INVALID_HID;
- hid_t space = H5I_INVALID_HID;
- hsize_t size[H5S_MAX_RANK];
- int ndims;
- int i;
- H5S_class_t space_type;
-
- if((attr = H5Aopen(obj, attr_name, H5P_DEFAULT))) {
+ hid_t attr = H5I_INVALID_HID;
+ hid_t space = H5I_INVALID_HID;
+ hsize_t size[H5S_MAX_RANK];
+ int ndims;
+ int i;
+ H5S_class_t space_type;
+
+ if ((attr = H5Aopen(obj, attr_name, H5P_DEFAULT))) {
space = H5Aget_space(attr);
/* Data space */
- ndims = H5Sget_simple_extent_dims(space, size, NULL);
+ ndims = H5Sget_simple_extent_dims(space, size, NULL);
space_type = H5Sget_simple_extent_type(space);
- switch(space_type) {
+ switch (space_type) {
case H5S_SCALAR:
/* scalar dataspace */
HDprintf(" scalar\n");
@@ -872,7 +856,7 @@ trav_attr(hid_t
/* simple dataspace */
HDprintf(" {");
for (i = 0; i < ndims; i++) {
- HDprintf("%s" HSIZE_T_FORMAT, i?", ":"", size[i]);
+ HDprintf("%s" HSIZE_T_FORMAT, i ? ", " : "", size[i]);
}
HDprintf("}\n");
break;
@@ -894,10 +878,9 @@ trav_attr(hid_t
}
#endif
- return(0);
+ return (0);
}
-
/*-------------------------------------------------------------------------
* Function: trav_print_visit_obj
*
@@ -908,15 +891,14 @@ trav_attr(hid_t
*-------------------------------------------------------------------------
*/
static int
-trav_print_visit_obj(const char *path, const H5O_info2_t *oinfo,
- const char *already_visited, void *udata)
+trav_print_visit_obj(const char *path, const H5O_info2_t *oinfo, const char *already_visited, void *udata)
{
trav_print_udata_t *print_udata = (trav_print_udata_t *)udata;
/* Print the name of the object */
/* (no new-line, so that objects that we've encountered before can print
* the name of the original object)
*/
- switch(oinfo->type) {
+ switch (oinfo->type) {
case H5O_TYPE_GROUP:
HDprintf(" %-10s %s", "group", path);
break;
@@ -938,24 +920,23 @@ trav_print_visit_obj(const char *path, const H5O_info2_t *oinfo,
} /* end switch */
/* Check if we've already seen this object */
- if(NULL == already_visited) {
+ if (NULL == already_visited) {
trav_path_op_data_t op_data;
op_data.path = path;
/* Finish printing line about object */
HDprintf("\n");
- if(trav_verbosity > 0)
- H5Aiterate_by_name(print_udata->fid, path, trav_index_by, trav_index_order,
- NULL, trav_attr, &op_data, H5P_DEFAULT);
+ if (trav_verbosity > 0)
+ H5Aiterate_by_name(print_udata->fid, path, trav_index_by, trav_index_order, NULL, trav_attr,
+ &op_data, H5P_DEFAULT);
}
else
/* Print the link's original name */
HDprintf(" -> %s\n", already_visited);
- return(0);
+ return (0);
} /* end trav_print_visit_obj() */
-
/*-------------------------------------------------------------------------
* Function: trav_print_visit_lnk
*
@@ -971,12 +952,12 @@ trav_print_visit_lnk(const char *path, const H5L_info2_t *linfo, void *udata)
trav_print_udata_t *print_udata = (trav_print_udata_t *)udata;
/* Print appropriate information for the type of link */
- switch(linfo->type) {
+ switch (linfo->type) {
case H5L_TYPE_SOFT:
- if(linfo->u.val_size > 0) {
- char *targbuf = (char*)HDmalloc(linfo->u.val_size + 1);
- if(targbuf) {
- if(H5Lget_val(print_udata->fid, path, targbuf, linfo->u.val_size + 1, H5P_DEFAULT) < 0)
+ if (linfo->u.val_size > 0) {
+ char *targbuf = (char *)HDmalloc(linfo->u.val_size + 1);
+ if (targbuf) {
+ if (H5Lget_val(print_udata->fid, path, targbuf, linfo->u.val_size + 1, H5P_DEFAULT) < 0)
targbuf[0] = 0;
HDprintf(" %-10s %s -> %s\n", "link", path, targbuf);
HDfree(targbuf);
@@ -987,16 +968,16 @@ trav_print_visit_lnk(const char *path, const H5L_info2_t *linfo, void *udata)
break;
case H5L_TYPE_EXTERNAL:
- if(linfo->u.val_size > 0) {
- char *targbuf = NULL;
+ if (linfo->u.val_size > 0) {
+ char * targbuf = NULL;
const char *filename = NULL;
- const char *objname = NULL;
+ const char *objname = NULL;
- targbuf = (char*)HDmalloc(linfo->u.val_size + 1);
- if(targbuf) {
- if(H5Lget_val(print_udata->fid, path, targbuf, linfo->u.val_size + 1, H5P_DEFAULT) < 0)
+ targbuf = (char *)HDmalloc(linfo->u.val_size + 1);
+ if (targbuf) {
+ if (H5Lget_val(print_udata->fid, path, targbuf, linfo->u.val_size + 1, H5P_DEFAULT) < 0)
targbuf[0] = 0;
- if(H5Lunpack_elink_val(targbuf, linfo->u.val_size, NULL, &filename, &objname) >= 0)
+ if (H5Lunpack_elink_val(targbuf, linfo->u.val_size, NULL, &filename, &objname) >= 0)
HDprintf(" %-10s %s -> %s %s\n", "ext link", path, filename, objname);
HDfree(targbuf);
}
@@ -1007,7 +988,7 @@ trav_print_visit_lnk(const char *path, const H5L_info2_t *linfo, void *udata)
case H5L_TYPE_HARD:
/* Should be handled elsewhere */
- return(-1);
+ return (-1);
case H5L_TYPE_ERROR:
case H5L_TYPE_MAX:
@@ -1016,10 +997,9 @@ trav_print_visit_lnk(const char *path, const H5L_info2_t *linfo, void *udata)
break;
} /* end switch() */
- return(0);
+ return (0);
} /* end trav_print_visit_lnk() */
-
/*-------------------------------------------------------------------------
* Function: h5trav_print
*
@@ -1032,9 +1012,9 @@ trav_print_visit_lnk(const char *path, const H5L_info2_t *linfo, void *udata)
int
h5trav_print(hid_t fid)
{
- trav_print_udata_t print_udata; /* User data for traversal */
- trav_visitor_t print_visitor; /* Visitor structure for printing objects */
- int ret_value = 0;
+ trav_print_udata_t print_udata; /* User data for traversal */
+ trav_visitor_t print_visitor; /* Visitor structure for printing objects */
+ int ret_value = 0;
/* Init user data for printing */
print_udata.fid = fid;
@@ -1042,17 +1022,16 @@ h5trav_print(hid_t fid)
/* Init visitor structure */
print_visitor.visit_obj = trav_print_visit_obj;
print_visitor.visit_lnk = trav_print_visit_lnk;
- print_visitor.udata = &print_udata;
+ print_visitor.udata = &print_udata;
/* Traverse all objects in the file, visiting each object & link */
- if(traverse(fid, "/", TRUE, TRUE, &print_visitor, H5O_INFO_BASIC) < 0)
+ if (traverse(fid, "/", TRUE, TRUE, &print_visitor, H5O_INFO_BASIC) < 0)
H5TOOLS_GOTO_ERROR(FAIL, "traverse failed");
done:
return ret_value;
}
-
/*-------------------------------------------------------------------------
* Function: h5trav_visit
*
@@ -1063,20 +1042,19 @@ done:
*-------------------------------------------------------------------------
*/
int
-h5trav_visit(hid_t fid, const char *grp_name, hbool_t visit_start,
- hbool_t recurse, h5trav_obj_func_t visit_obj, h5trav_lnk_func_t visit_lnk,
- void *udata, unsigned fields)
+h5trav_visit(hid_t fid, const char *grp_name, hbool_t visit_start, hbool_t recurse,
+ h5trav_obj_func_t visit_obj, h5trav_lnk_func_t visit_lnk, void *udata, unsigned fields)
{
- trav_visitor_t visitor; /* Visitor structure for objects */
+ trav_visitor_t visitor; /* Visitor structure for objects */
int ret_value = 0;
/* Init visitor structure */
visitor.visit_obj = visit_obj;
visitor.visit_lnk = visit_lnk;
- visitor.udata = udata;
+ visitor.udata = udata;
/* Traverse all objects in the file, visiting each object & link */
- if(traverse(fid, grp_name, visit_start, recurse, &visitor, fields) < 0)
+ if (traverse(fid, grp_name, visit_start, recurse, &visitor, fields) < 0)
H5TOOLS_GOTO_ERROR((-1), "traverse failed");
done:
@@ -1095,15 +1073,15 @@ done:
herr_t
symlink_visit_add(symlink_trav_t *visited, H5L_type_t type, const char *file, const char *path)
{
- size_t idx; /* Index of address to use */
+ size_t idx; /* Index of address to use */
herr_t ret_value = SUCCEED;
/* Allocate space if necessary */
- if(visited->nused == visited->nalloc) {
- void *tmp_ptr;
+ if (visited->nused == visited->nalloc) {
+ void *tmp_ptr;
visited->nalloc = MAX(1, visited->nalloc * 2);
- if(NULL == (tmp_ptr = HDrealloc(visited->objs, visited->nalloc * sizeof(symlink_trav_path_t))))
+ if (NULL == (tmp_ptr = HDrealloc(visited->objs, visited->nalloc * sizeof(symlink_trav_path_t))))
H5TOOLS_GOTO_ERROR(FAIL, "visited data structure realloc failed");
visited->objs = (symlink_trav_path_t *)tmp_ptr;
} /* end if */
@@ -1115,17 +1093,17 @@ symlink_visit_add(symlink_trav_t *visited, H5L_type_t type, const char *file, co
visited->objs[idx].file = NULL;
visited->objs[idx].path = NULL;
- if(type == H5L_TYPE_EXTERNAL) {
- if(NULL == (visited->objs[idx].file = HDstrdup(file))) {
+ if (type == H5L_TYPE_EXTERNAL) {
+ if (NULL == (visited->objs[idx].file = HDstrdup(file))) {
visited->nused--;
H5TOOLS_GOTO_ERROR(FAIL, "visited data structure name allocation failed");
} /* end if */
- } /* end if */
+ } /* end if */
- if(NULL == (visited->objs[idx].path = HDstrdup(path))) {
+ if (NULL == (visited->objs[idx].path = HDstrdup(path))) {
visited->nused--;
- if(visited->objs[idx].file)
- HDfree (visited->objs[idx].file);
+ if (visited->objs[idx].file)
+ HDfree(visited->objs[idx].file);
H5TOOLS_GOTO_ERROR(FAIL, "visited data structure path allocation failed");
} /* end if */
@@ -1133,7 +1111,6 @@ done:
return ret_value;
} /* end symlink_visit_add() */
-
/*-------------------------------------------------------------------------
* Function: symlink_is_visited
*
@@ -1145,23 +1122,22 @@ done:
H5_ATTR_PURE hbool_t
symlink_is_visited(symlink_trav_t *visited, H5L_type_t type, const char *file, const char *path)
{
- size_t u; /* Local index variable */
+ size_t u; /* Local index variable */
/* Look for symlink */
- for(u = 0; u < visited->nused; u++) {
+ for (u = 0; u < visited->nused; u++) {
/* Check for symlink values already in array */
/* check type and path pair to distingush between symbolic links */
- if((visited->objs[u].type == type) && !HDstrcmp(visited->objs[u].path, path)) {
+ if ((visited->objs[u].type == type) && !HDstrcmp(visited->objs[u].path, path)) {
/* if external link, file need to be matched as well */
- if(visited->objs[u].type == H5L_TYPE_EXTERNAL)
- if(!HDstrcmp(visited->objs[u].file, file))
- return(TRUE);
+ if (visited->objs[u].type == H5L_TYPE_EXTERNAL)
+ if (!HDstrcmp(visited->objs[u].file, file))
+ return (TRUE);
return (TRUE);
} /* end if */
- } /* end for */
+ } /* end for */
/* Didn't find symlink */
- return(FALSE);
+ return (FALSE);
} /* end symlink_is_visited() */
-