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author | Scot Breitenfeld <brtnfld@hdfgroup.org> | 2008-04-30 19:51:13 (GMT) |
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committer | Scot Breitenfeld <brtnfld@hdfgroup.org> | 2008-04-30 19:51:13 (GMT) |
commit | aec106e324ce20e5efb725c25a6a333c7970127b (patch) | |
tree | 234df369115a46b08037c5f385061cf58823e497 /tools/lib | |
parent | 5773fd34bc5adf59b4530d95ac9f0c0585902803 (diff) | |
download | hdf5-aec106e324ce20e5efb725c25a6a333c7970127b.zip hdf5-aec106e324ce20e5efb725c25a6a333c7970127b.tar.gz hdf5-aec106e324ce20e5efb725c25a6a333c7970127b.tar.bz2 |
[svn-r14903] Undoing change committed in r14902.
Diffstat (limited to 'tools/lib')
-rw-r--r-- | tools/lib/h5diff.c | 217 | ||||
-rw-r--r-- | tools/lib/h5diff_array.c | 276 | ||||
-rw-r--r-- | tools/lib/h5diff_dset.c | 1369 | ||||
-rw-r--r-- | tools/lib/h5diff_util.c | 268 | ||||
-rw-r--r-- | tools/lib/h5tools.c | 42 |
5 files changed, 1132 insertions, 1040 deletions
diff --git a/tools/lib/h5diff.c b/tools/lib/h5diff.c index 4f4074f..9d64e44 100644 --- a/tools/lib/h5diff.c +++ b/tools/lib/h5diff.c @@ -47,7 +47,7 @@ int print_objname (diff_opt_t * options, hsize_t nfound) { - return ((options->m_verbose || nfound) && !options->m_quiet) ? 1 : 0; + return ((options->m_verbose || nfound) && !options->m_quiet) ? 1 : 0; } /*------------------------------------------------------------------------- @@ -186,15 +186,17 @@ hsize_t h5diff(const char *fname1, const char *objname2, diff_opt_t *options) { - trav_info_t *info1; - trav_info_t *info2; - hid_t file1_id = (-1), file2_id = (-1); + trav_info_t *info1=NULL; + trav_info_t *info2=NULL; + hid_t file1_id = (-1); + hid_t file2_id = (-1); char filenames[2][1024]; hsize_t nfound = 0; HDmemset(filenames, 0, 1024 * 2); - if(options->m_quiet && (options->m_verbose || options->m_report)) { + if(options->m_quiet && (options->m_verbose || options->m_report)) + { printf("Error: -q (quiet mode) cannot be added to verbose or report modes\n"); options->err_stat=1; return 0; @@ -206,9 +208,11 @@ hsize_t h5diff(const char *fname1, */ /* disable error reporting */ - H5E_BEGIN_TRY { - /* Open the files */ - if((file1_id = H5Fopen(fname1, H5F_ACC_RDONLY, H5P_DEFAULT)) < 0) { + H5E_BEGIN_TRY + { + /* open the files */ + if((file1_id = H5Fopen(fname1, H5F_ACC_RDONLY, H5P_DEFAULT)) < 0) + { printf("h5diff: <%s>: unable to open file\n", fname1); options->err_stat = 1; @@ -219,7 +223,8 @@ hsize_t h5diff(const char *fname1, #endif goto out; } /* end if */ - if((file2_id = H5Fopen(fname2, H5F_ACC_RDONLY, H5P_DEFAULT)) < 0) { + if((file2_id = H5Fopen(fname2, H5F_ACC_RDONLY, H5P_DEFAULT)) < 0) + { printf("h5diff: <%s>: unable to open file\n", fname2); options->err_stat = 1; @@ -255,11 +260,12 @@ hsize_t h5diff(const char *fname1, goto out; } /* end if */ - /*------------------------------------------------------------------------- + /*------------------------------------------------------------------------- * object name was supplied *------------------------------------------------------------------------- */ - if(objname1) { + if( objname1 ) + { #ifdef H5_HAVE_PARALLEL if(g_Parallel) /* Let tasks know that they won't be needed */ @@ -267,22 +273,31 @@ hsize_t h5diff(const char *fname1, #endif assert(objname2); options->cmn_objs = 1; /* eliminate warning */ - nfound = diff_compare(file1_id, fname1, objname1, info1, - file2_id, fname2, objname2, info2, + nfound = diff_compare(file1_id, + fname1, + objname1, + info1, + file2_id, + fname2, + objname2, + info2, options); } /* end if */ - /*------------------------------------------------------------------------- + /*------------------------------------------------------------------------- * compare all *------------------------------------------------------------------------- */ - else { + else + { #ifdef H5_HAVE_PARALLEL - if(g_Parallel) { + if(g_Parallel) + { int i; - if((HDstrlen(fname1) > 1024) || (HDstrlen(fname2) > 1024)) { + if((HDstrlen(fname1) > 1024) || (HDstrlen(fname2) > 1024)) + { fprintf(stderr, "The parallel diff only supports path names up to 1024 characters\n"); MPI_Abort(MPI_COMM_WORLD, 0); } /* end if */ @@ -295,7 +310,12 @@ hsize_t h5diff(const char *fname1, MPI_Send(filenames, (1024 * 2), MPI_CHAR, i, MPI_TAG_PARALLEL, MPI_COMM_WORLD); } /* end if */ #endif - nfound = diff_match(file1_id, info1, file2_id, info2, options); + + nfound = diff_match(file1_id, + info1, + file2_id, + info2, + options); } /* end else */ trav_info_free(info1); @@ -303,7 +323,8 @@ hsize_t h5diff(const char *fname1, out: /* close */ - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Fclose(file1_id); H5Fclose(file2_id); } H5E_END_TRY; @@ -332,22 +353,23 @@ out: *------------------------------------------------------------------------- */ hsize_t diff_match(hid_t file1_id, - trav_info_t * info1, - hid_t file2_id, - trav_info_t * info2, - diff_opt_t * options) + trav_info_t *info1, + hid_t file2_id, + trav_info_t *info2, + diff_opt_t *options) { trav_table_t *table = NULL; - size_t curr1, curr2; - unsigned infile[2]; - hsize_t nfound = 0; - unsigned i; + size_t curr1; + size_t curr2; + unsigned infile[2]; + hsize_t nfound = 0; + unsigned i; /*------------------------------------------------------------------------- * build the list *------------------------------------------------------------------------- */ - trav_table_init(&table); + trav_table_init( &table ); curr1 = 0; curr2 = 0; @@ -393,11 +415,12 @@ hsize_t diff_match(hid_t file1_id, curr2++; } /* end while */ - /*------------------------------------------------------------------------- + /*------------------------------------------------------------------------- * print the list *------------------------------------------------------------------------- */ - if(options->m_verbose) { + if(options->m_verbose) + { printf("\n"); printf("file1 file2\n"); printf("---------------------------------------\n"); @@ -702,59 +725,64 @@ hsize_t diff_match(hid_t file1_id, *------------------------------------------------------------------------- */ -hsize_t diff_compare (hid_t file1_id, - const char *file1_name, - const char *obj1_name, - trav_info_t * info1, - hid_t file2_id, - const char *file2_name, - const char *obj2_name, - trav_info_t * info2, - diff_opt_t * options) +hsize_t diff_compare(hid_t file1_id, + const char *file1_name, + const char *obj1_name, + trav_info_t *info1, + hid_t file2_id, + const char *file2_name, + const char *obj2_name, + trav_info_t *info2, + diff_opt_t *options) { - int f1 = 0, f2 = 0; - hsize_t nfound = 0; - - ssize_t i = h5trav_getindex (info1, obj1_name); - ssize_t j = h5trav_getindex (info2, obj2_name); - - if (i == -1) - { - parallel_print ("Object <%s> could not be found in <%s>\n", obj1_name, - file1_name); - f1 = 1; - } - if (j == -1) - { - parallel_print ("Object <%s> could not be found in <%s>\n", obj2_name, - file2_name); - f2 = 1; - } - if (f1 || f2) - { - options->err_stat = 1; - return 0; - } - - /* use the name with "/" first, as obtained by iterator function */ - obj1_name = info1->paths[i].path; - obj2_name = info2->paths[j].path; - - /* objects are not the same type */ - if (info1->paths[i].type != info2->paths[j].type) - { - if (options->m_verbose) - parallel_print("Comparison not possible: <%s> is of type %s and <%s> is of type %s\n", - obj1_name, get_type(info1->paths[i].type), obj2_name, - get_type(info2->paths[j].type)); - options->not_cmp=1; - return 0; - } - - nfound = - diff (file1_id, obj1_name, file2_id, obj2_name, options, info1->paths[i].type); - - return nfound; + int f1 = 0; + int f2 = 0; + hsize_t nfound = 0; + + ssize_t i = h5trav_getindex (info1, obj1_name); + ssize_t j = h5trav_getindex (info2, obj2_name); + + if (i == -1) + { + parallel_print ("Object <%s> could not be found in <%s>\n", obj1_name, + file1_name); + f1 = 1; + } + if (j == -1) + { + parallel_print ("Object <%s> could not be found in <%s>\n", obj2_name, + file2_name); + f2 = 1; + } + if (f1 || f2) + { + options->err_stat = 1; + return 0; + } + + /* use the name with "/" first, as obtained by iterator function */ + obj1_name = info1->paths[i].path; + obj2_name = info2->paths[j].path; + + /* objects are not the same type */ + if (info1->paths[i].type != info2->paths[j].type) + { + if (options->m_verbose) + parallel_print("Comparison not possible: <%s> is of type %s and <%s> is of type %s\n", + obj1_name, get_type(info1->paths[i].type), obj2_name, + get_type(info2->paths[j].type)); + options->not_cmp=1; + return 0; + } + + nfound = diff(file1_id, + obj1_name, + file2_id, + obj2_name, + options, + info1->paths[i].type); + + return nfound; } @@ -784,14 +812,15 @@ hsize_t diff(hid_t file1_id, diff_opt_t * options, h5trav_type_t type) { - hid_t type1_id = (-1); - hid_t type2_id = (-1); - hid_t grp1_id = (-1); - hid_t grp2_id = (-1); - int ret; + hid_t type1_id = (-1); + hid_t type2_id = (-1); + hid_t grp1_id = (-1); + hid_t grp2_id = (-1); + int ret; hsize_t nfound = 0; - switch(type) { + switch(type) + { /*------------------------------------------------------------------------- * H5TRAV_TYPE_DATASET *------------------------------------------------------------------------- @@ -801,7 +830,8 @@ hsize_t diff(hid_t file1_id, * verbose, always print name *------------------------------------------------------------------------- */ - if(options->m_verbose) { + if(options->m_verbose) + { if(print_objname(options, (hsize_t)1)) do_print_objname("dataset", path1, path2); nfound = diff_dataset(file1_id, file2_id, path1, path2, options); @@ -813,15 +843,18 @@ hsize_t diff(hid_t file1_id, * disabling quiet mode *------------------------------------------------------------------------- */ - else { - if(options->m_quiet == 0) { + else + { + if(options->m_quiet == 0) + { /* shut up temporarily */ options->m_quiet = 1; nfound = diff_dataset(file1_id, file2_id, path1, path2, options); /* print again */ options->m_quiet = 0; - if(nfound) { + if(nfound) + { if(print_objname(options,nfound)) do_print_objname("dataset", path1, path2); nfound = diff_dataset(file1_id, file2_id, path1, path2, options); diff --git a/tools/lib/h5diff_array.c b/tools/lib/h5diff_array.c index 008b6b9..c5646ed 100644 --- a/tools/lib/h5diff_array.c +++ b/tools/lib/h5diff_array.c @@ -119,7 +119,7 @@ static int not_comparable; is_zero=1; \ } -# define PDIFF(a,b) ( (b>a) ? (b-a) : (a-b)) +#define PDIFF(a,b) ( (b>a) ? (b-a) : (a-b)) /*------------------------------------------------------------------------- * local prototypes @@ -127,11 +127,12 @@ static int not_comparable; */ static hsize_t diff_region(hid_t obj1_id, hid_t obj2_id,hid_t region1_id, hid_t region2_id, diff_opt_t *options); static hbool_t all_zero(const void *_mem, size_t size); -static int ull2float(unsigned long_long ull_value, float *f_value); static hsize_t character_compare(unsigned char *mem1,unsigned char *mem2,hsize_t i,int rank,hsize_t *dims,hsize_t *acc,hsize_t *pos,diff_opt_t *options,const char *obj1,const char *obj2,int *ph); static hsize_t character_compare_opt(unsigned char *mem1,unsigned char *mem2,hsize_t i,int rank,hsize_t *dims,hsize_t *acc,hsize_t *pos,diff_opt_t *options,const char *obj1,const char *obj2,int *ph); static hbool_t equal_float(float value, float expected); static hbool_t equal_double(double value, double expected); +static int ull2float(unsigned long_long ull_value, float *f_value); + /*------------------------------------------------------------------------- * NaN detection @@ -266,8 +267,6 @@ hsize_t diff_array( void *_mem1, size_t size; /* size of datum */ unsigned char *mem1 = (unsigned char*)_mem1; unsigned char *mem2 = (unsigned char*)_mem2; - unsigned char *tmp1; - unsigned char *tmp2; hsize_t acc[32]; /* accumulator position */ hsize_t pos[32]; /* matrix position */ int ph=1; /* print header */ @@ -288,23 +287,26 @@ hsize_t diff_array( void *_mem1, if(H5Tis_variable_str(m_type)) { - tmp1 = ((unsigned char**)mem1)[0]; - tmp2 = ((unsigned char**)mem2)[0]; - nfound+=diff_datum( - tmp1, - tmp2, - m_type, - (hsize_t)0, - rank, - dims, - acc, - pos, - options, - name1, - name2, - container1_id, - container2_id, - &ph); + for ( i = 0; i < nelmts; i++) + { + nfound+=diff_datum( + ((unsigned char**)mem1)[(size_t)i], + ((unsigned char**)mem2)[(size_t)i], + m_type, + i, + rank, + dims, + acc, + pos, + options, + name1, + name2, + container1_id, + container2_id, + &ph); + if (options->n && nfound>=options->count) + return nfound; + } /* i */ } else @@ -515,42 +517,35 @@ hsize_t diff_datum(void *_mem1, case H5T_STRING: { - H5T_str_t pad; char *s; - if(H5Tis_variable_str(m_type)) - { - /* mem1 is the pointer into the struct where a `char*' is stored. So we have - * to dereference the pointer to get the `char*' to pass to HDstrlen(). */ - s = *(char**)mem1; - if(s!=NULL) - size = HDstrlen(s); - } - else - { - s = (char *)mem1; - size = H5Tget_size(m_type); - } - - pad = H5Tget_strpad(m_type); - + /* Get pointer to first string to compare */ + s = (char *)mem1; + /* check for NULL pointer for string */ if(s!=NULL) { + if(H5Tis_variable_str(m_type)) + size = HDstrlen(s); + else + size = H5Tget_size(m_type); + + pad = H5Tget_strpad(m_type); + for (u=0; u<size && (s[u] || pad!=H5T_STR_NULLTERM); u++) nfound+=character_compare( - mem1 + u, - mem2 + u, /* offset */ - i, /* index position */ - rank, - dims, - acc, - pos, - options, - obj1, - obj2, - ph); + mem1 + u, + mem2 + u, /* offset */ + i, /* index position */ + rank, + dims, + acc, + pos, + options, + obj1, + obj2, + ph); } } @@ -697,7 +692,6 @@ hsize_t diff_datum(void *_mem1, H5Tclose(memb_type); } break; - /*------------------------------------------------------------------------- @@ -2867,7 +2861,6 @@ hsize_t diff_float(unsigned char *mem1, } - /*------------------------------------------------------------------------- * Function: diff_double * @@ -2897,80 +2890,111 @@ hsize_t diff_double(unsigned char *mem1, hsize_t i; double per; int both_zero; + int isnan1; + int isnan2; - - /* -d and !-p */ + + /*------------------------------------------------------------------------- + * -d and !-p + *------------------------------------------------------------------------- + */ + if (options->d && !options->p) { - for ( i = 0; i < nelmts; i++) { memcpy(&temp1_double, mem1, sizeof(double)); memcpy(&temp2_double, mem2, sizeof(double)); - - if (ABS(temp1_double-temp2_double) > options->delta) - { - if ( print_data(options) ) + + /*------------------------------------------------------------------------- + * detect NaNs + *------------------------------------------------------------------------- + */ + isnan1 = my_isnan(FLT_DOUBLE,&temp1_double); + isnan2 = my_isnan(FLT_DOUBLE,&temp2_double); + + if ( !isnan1 && !isnan2) + { + if (ABS(temp1_double-temp2_double) > options->delta) { - print_pos(ph,0,hyper_start+i,acc,pos,rank,dims,obj1,obj2); - parallel_print(SPACES); - parallel_print(F_FORMAT,temp1_double,temp2_double,ABS(temp1_double-temp2_double)); + if ( print_data(options) ) + { + print_pos(ph,0,hyper_start+i,acc,pos,rank,dims,obj1,obj2); + parallel_print(SPACES); + parallel_print(F_FORMAT,temp1_double,temp2_double,ABS(temp1_double-temp2_double)); + } + nfound++; } - nfound++; - } + } /* NaN */ mem1+=sizeof(double); mem2+=sizeof(double); if (options->n && nfound>=options->count) return nfound; - } + } /* i */ } - - /* !-d and -p */ + + /*------------------------------------------------------------------------- + * !-d and -p + *------------------------------------------------------------------------- + */ else if (!options->d && options->p) { - for ( i = 0; i < nelmts; i++) { memcpy(&temp1_double, mem1, sizeof(double)); memcpy(&temp2_double, mem2, sizeof(double)); - PER(temp1_double,temp2_double); - - if (not_comparable && !both_zero) /* not comparable */ - { - if ( print_data(options) ) - { - print_pos(ph,1,hyper_start+i,acc,pos,rank,dims,obj1,obj2); - parallel_print(SPACES); - parallel_print(F_FORMAT_P_NOTCOMP,temp1_double,temp2_double, - ABS(temp1_double-temp2_double)); - } - options->not_cmp=1; - nfound++; - } + /*------------------------------------------------------------------------- + * detect NaNs + *------------------------------------------------------------------------- + */ + isnan1 = my_isnan(FLT_DOUBLE,&temp1_double); + isnan2 = my_isnan(FLT_DOUBLE,&temp2_double); - else + if ( !isnan1 && !isnan2) + { + + PER(temp1_double,temp2_double); - if ( per > options->percent ) + if (not_comparable && !both_zero) /* not comparable */ { if ( print_data(options) ) { print_pos(ph,1,hyper_start+i,acc,pos,rank,dims,obj1,obj2); parallel_print(SPACES); - parallel_print(F_FORMAT_P,temp1_double,temp2_double, - ABS(temp1_double-temp2_double), - ABS(1-temp2_double/temp1_double)); + parallel_print(F_FORMAT_P_NOTCOMP,temp1_double,temp2_double, + ABS(temp1_double-temp2_double)); } + options->not_cmp=1; nfound++; } - mem1+=sizeof(double); - mem2+=sizeof(double); - if (options->n && nfound>=options->count) - return nfound; - } + + else + + if ( per > options->percent ) + { + if ( print_data(options) ) + { + print_pos(ph,1,hyper_start+i,acc,pos,rank,dims,obj1,obj2); + parallel_print(SPACES); + parallel_print(F_FORMAT_P,temp1_double,temp2_double, + ABS(temp1_double-temp2_double), + ABS(1-temp2_double/temp1_double)); + } + nfound++; + } + } /* NaN */ + mem1+=sizeof(double); + mem2+=sizeof(double); + if (options->n && nfound>=options->count) + return nfound; + } /* i */ } - /* -d and -p */ + /*------------------------------------------------------------------------- + * -d and -p + *------------------------------------------------------------------------- + */ else if ( options->d && options->p) { @@ -2979,41 +3003,58 @@ hsize_t diff_double(unsigned char *mem1, memcpy(&temp1_double, mem1, sizeof(double)); memcpy(&temp2_double, mem2, sizeof(double)); - PER(temp1_double,temp2_double); - - if (not_comparable && !both_zero) /* not comparable */ - { - if ( print_data(options) ) - { - print_pos(ph,1,hyper_start+i,acc,pos,rank,dims,obj1,obj2); - parallel_print(SPACES); - parallel_print(F_FORMAT_P_NOTCOMP,temp1_double,temp2_double, - ABS(temp1_double-temp2_double)); - } - options->not_cmp=1; - nfound++; - } + /*------------------------------------------------------------------------- + * detect NaNs + *------------------------------------------------------------------------- + */ + isnan1 = my_isnan(FLT_DOUBLE,&temp1_double); + isnan2 = my_isnan(FLT_DOUBLE,&temp2_double); - else + if ( !isnan1 && !isnan2) + { + + PER(temp1_double,temp2_double); - if ( per > options->percent && ABS(temp1_double-temp2_double) > options->delta ) + if (not_comparable && !both_zero) /* not comparable */ { if ( print_data(options) ) { print_pos(ph,1,hyper_start+i,acc,pos,rank,dims,obj1,obj2); parallel_print(SPACES); - parallel_print(F_FORMAT_P,temp1_double,temp2_double, - ABS(temp1_double-temp2_double), - ABS(1-temp2_double/temp1_double)); + parallel_print(F_FORMAT_P_NOTCOMP,temp1_double,temp2_double, + ABS(temp1_double-temp2_double)); } + options->not_cmp=1; nfound++; } - mem1+=sizeof(double); - mem2+=sizeof(double); - if (options->n && nfound>=options->count) - return nfound; - } + + else + + if ( per > options->percent && ABS(temp1_double-temp2_double) > options->delta ) + { + if ( print_data(options) ) + { + print_pos(ph,1,hyper_start+i,acc,pos,rank,dims,obj1,obj2); + parallel_print(SPACES); + parallel_print(F_FORMAT_P,temp1_double,temp2_double, + ABS(temp1_double-temp2_double), + ABS(1-temp2_double/temp1_double)); + } + nfound++; + } + + } /* NaN */ + mem1+=sizeof(double); + mem2+=sizeof(double); + if (options->n && nfound>=options->count) + return nfound; + } /* i */ } + + /*------------------------------------------------------------------------- + * no -d and -p + *------------------------------------------------------------------------- + */ else { @@ -3044,6 +3085,9 @@ hsize_t diff_double(unsigned char *mem1, return nfound; } + + + /*------------------------------------------------------------------------- * Function: diff_schar * diff --git a/tools/lib/h5diff_dset.c b/tools/lib/h5diff_dset.c index ea833db..3f4e6a3 100644 --- a/tools/lib/h5diff_dset.c +++ b/tools/lib/h5diff_dset.c @@ -19,33 +19,6 @@ #include "h5tools.h" /*------------------------------------------------------------------------- - * Function: print_size - * - * Purpose: print dimensions - * - *------------------------------------------------------------------------- - */ -#if defined (H5DIFF_DEBUG) -static void -print_size (int rank, hsize_t *dims) -{ - int i; - - parallel_print("[" ); - for ( i = 0; i < rank-1; i++) - { - parallel_print("%"H5_PRINTF_LL_WIDTH"u", (unsigned long_long)dims[i]); - parallel_print("x"); - } - parallel_print("%"H5_PRINTF_LL_WIDTH"u", (unsigned long_long)dims[rank-1]); - parallel_print("]\n" ); - -} -#endif /* H5DIFF_DEBUG */ - - - -/*------------------------------------------------------------------------- * Function: diff_dataset * * Purpose: check for comparable datasets and read into a compatible @@ -65,79 +38,85 @@ hsize_t diff_dataset( hid_t file1_id, const char *obj2_name, diff_opt_t *options) { - hid_t did1 = -1; - hid_t did2 = -1; - hid_t dcpl1 = -1; - hid_t dcpl2 = -1; - hsize_t nfound = 0; - -/*------------------------------------------------------------------------- - * open the handles - *------------------------------------------------------------------------- - */ - /* disable error reporting */ - H5E_BEGIN_TRY { - /* Open the datasets */ - if((did1 = H5Dopen2(file1_id, obj1_name, H5P_DEFAULT)) < 0) { - printf("Cannot open dataset <%s>\n", obj1_name); - goto error; - } - if((did2 = H5Dopen2(file2_id, obj2_name, H5P_DEFAULT)) < 0) { - printf("Cannot open dataset <%s>\n", obj2_name); - goto error; - } - /* enable error reporting */ - } H5E_END_TRY; - - - if((dcpl1 = H5Dget_create_plist(did1)) < 0) - goto error; - if((dcpl2 = H5Dget_create_plist(did2)) < 0) - goto error; - -/*------------------------------------------------------------------------- - * check if the dataset creation property list has filters that - * are not registered in the current configuration - * 1) the external filters GZIP and SZIP might not be available - * 2) the internal filters might be turned off - *------------------------------------------------------------------------- - */ - if ((h5tools_canreadf((options->m_verbose?obj1_name:NULL),dcpl1)==1) && - (h5tools_canreadf((options->m_verbose?obj2_name:NULL),dcpl2)==1)) - { - nfound=diff_datasetid(did1, - did2, - obj1_name, - obj2_name, - options); - } -/*------------------------------------------------------------------------- - * close - *------------------------------------------------------------------------- - */ - /* disable error reporting */ - H5E_BEGIN_TRY { - H5Pclose(dcpl1); - H5Pclose(dcpl2); - H5Dclose(did1); - H5Dclose(did2); - /* enable error reporting */ - } H5E_END_TRY; - - return nfound; - + hid_t did1 = -1; + hid_t did2 = -1; + hid_t dcpl1 = -1; + hid_t dcpl2 = -1; + hsize_t nfound = 0; + + /*------------------------------------------------------------------------- + * open the handles + *------------------------------------------------------------------------- + */ + /* disable error reporting */ + H5E_BEGIN_TRY + { + /* open the datasets */ + if((did1 = H5Dopen2(file1_id, obj1_name, H5P_DEFAULT)) < 0) + { + printf("Cannot open dataset <%s>\n", obj1_name); + goto error; + } + + if((did2 = H5Dopen2(file2_id, obj2_name, H5P_DEFAULT)) < 0) + { + printf("Cannot open dataset <%s>\n", obj2_name); + goto error; + } + /* enable error reporting */ + } H5E_END_TRY; + + + if ((dcpl1 = H5Dget_create_plist(did1)) < 0) + goto error; + if ((dcpl2 = H5Dget_create_plist(did2)) < 0) + goto error; + + /*------------------------------------------------------------------------- + * check if the dataset creation property list has filters that + * are not registered in the current configuration + * 1) the external filters GZIP and SZIP might not be available + * 2) the internal filters might be turned off + *------------------------------------------------------------------------- + */ + if ((h5tools_canreadf((options->m_verbose?obj1_name:NULL),dcpl1)==1) && + (h5tools_canreadf((options->m_verbose?obj2_name:NULL),dcpl2)==1)) + { + nfound=diff_datasetid(did1, + did2, + obj1_name, + obj2_name, + options); + } + /*------------------------------------------------------------------------- + * close + *------------------------------------------------------------------------- + */ + /* disable error reporting */ + H5E_BEGIN_TRY + { + H5Pclose(dcpl1); + H5Pclose(dcpl2); + H5Dclose(did1); + H5Dclose(did2); + /* enable error reporting */ + } H5E_END_TRY; + + return nfound; + error: - options->err_stat=1; - /* disable error reporting */ - H5E_BEGIN_TRY { - H5Pclose(dcpl1); - H5Pclose(dcpl2); - H5Dclose(did1); - H5Dclose(did2); - /* enable error reporting */ - } H5E_END_TRY; - - return nfound; + options->err_stat=1; + /* disable error reporting */ + H5E_BEGIN_TRY + { + H5Pclose(dcpl1); + H5Pclose(dcpl2); + H5Dclose(did1); + H5Dclose(did2); + /* enable error reporting */ + } H5E_END_TRY; + + return nfound; } /*------------------------------------------------------------------------- @@ -154,7 +133,6 @@ error: * * Modifications: * - * * October 2006: Read by hyperslabs for big datasets. * * A threshold of H5TOOLS_MALLOCSIZE (128 MB) is the limit upon which I/O hyperslab is done @@ -204,448 +182,456 @@ hsize_t diff_datasetid( hid_t did1, const char *obj2_name, diff_opt_t *options) { - hid_t sid1=-1; - hid_t sid2=-1; - hid_t f_tid1=-1; - hid_t f_tid2=-1; - hid_t m_tid1=-1; - hid_t m_tid2=-1; - size_t m_size1; - size_t m_size2; - H5T_sign_t sign1; - H5T_sign_t sign2; - int rank1; - int rank2; - hsize_t nelmts1; - hsize_t nelmts2; - hsize_t dims1[H5S_MAX_RANK]; - hsize_t dims2[H5S_MAX_RANK]; - hsize_t maxdim1[H5S_MAX_RANK]; - hsize_t maxdim2[H5S_MAX_RANK]; - const char *name1=NULL; /* relative names */ - const char *name2=NULL; - hsize_t storage_size1; - hsize_t storage_size2; - hsize_t nfound=0; /* number of differences found */ - int cmp=1; /* do diff or not */ - void *buf1=NULL; - void *buf2=NULL; - void *sm_buf1=NULL; - void *sm_buf2=NULL; - size_t need; /* bytes needed for malloc */ - int i; - - /* Get the dataspace handle */ - if ( (sid1 = H5Dget_space(did1)) < 0 ) - goto error; - - /* Get rank */ - if ( (rank1 = H5Sget_simple_extent_ndims(sid1)) < 0 ) - goto error; - - /* Get the dataspace handle */ - if ( (sid2 = H5Dget_space(did2)) < 0 ) - goto error; - - /* Get rank */ - if ( (rank2 = H5Sget_simple_extent_ndims(sid2)) < 0 ) - goto error; - - /* Get dimensions */ - if ( H5Sget_simple_extent_dims(sid1,dims1,maxdim1) < 0 ) - goto error; - - /* Get dimensions */ - if ( H5Sget_simple_extent_dims(sid2,dims2,maxdim2) < 0 ) - goto error; - -/*------------------------------------------------------------------------- - * Get the file data type - *------------------------------------------------------------------------- - */ - - /* Get the data type */ - if ( (f_tid1 = H5Dget_type(did1)) < 0 ) - goto error; - - /* Get the data type */ - if ( (f_tid2 = H5Dget_type(did2)) < 0 ) - goto error; - -/*------------------------------------------------------------------------- - * check for empty datasets - *------------------------------------------------------------------------- - */ - - storage_size1=H5Dget_storage_size(did1); - storage_size2=H5Dget_storage_size(did2); - - if (storage_size1==0 || storage_size2==0) - { - if (options->m_verbose && obj1_name && obj2_name) - parallel_print("<%s> or <%s> are empty datasets\n", obj1_name, obj2_name); - cmp=0; - options->not_cmp=1; - } - -/*------------------------------------------------------------------------- - * check for comparable TYPE and SPACE - *------------------------------------------------------------------------- - */ - - if (diff_can_type(f_tid1, - f_tid2, - rank1, - rank2, - dims1, - dims2, - maxdim1, - maxdim2, - obj1_name, - obj2_name, - options)!=1) - { - cmp=0; - options->not_cmp=1; - } - -/*------------------------------------------------------------------------- - * memory type and sizes - *------------------------------------------------------------------------- - */ - if ((m_tid1=h5tools_get_native_type(f_tid1)) < 0) - goto error; - - if ((m_tid2=h5tools_get_native_type(f_tid2)) < 0) - goto error; - - m_size1 = H5Tget_size( m_tid1 ); - m_size2 = H5Tget_size( m_tid2 ); - -/*------------------------------------------------------------------------- - * check for different signed/unsigned types - *------------------------------------------------------------------------- - */ - - sign1=H5Tget_sign(m_tid1); - sign2=H5Tget_sign(m_tid2); - if ( sign1 != sign2 ) - { - if (options->m_verbose && obj1_name) { - parallel_print("Comparison not supported: <%s> has sign %s ", obj1_name, get_sign(sign1)); - parallel_print("and <%s> has sign %s\n", obj2_name, get_sign(sign2)); + hid_t sid1=-1; + hid_t sid2=-1; + hid_t f_tid1=-1; + hid_t f_tid2=-1; + hid_t m_tid1=-1; + hid_t m_tid2=-1; + size_t m_size1; + size_t m_size2; + H5T_sign_t sign1; + H5T_sign_t sign2; + int rank1; + int rank2; + hsize_t nelmts1; + hsize_t nelmts2; + hsize_t dims1[H5S_MAX_RANK]; + hsize_t dims2[H5S_MAX_RANK]; + hsize_t maxdim1[H5S_MAX_RANK]; + hsize_t maxdim2[H5S_MAX_RANK]; + const char *name1=NULL; /* relative names */ + const char *name2=NULL; + hsize_t storage_size1; + hsize_t storage_size2; + hsize_t nfound=0; /* number of differences found */ + int cmp=1; /* do diff or not */ + void *buf1=NULL; + void *buf2=NULL; + void *sm_buf1=NULL; + void *sm_buf2=NULL; + size_t need; /* bytes needed for malloc */ + int i; + + /* get the dataspace handle */ + if ( (sid1 = H5Dget_space(did1)) < 0 ) + goto error; + + /* get rank */ + if ( (rank1 = H5Sget_simple_extent_ndims(sid1)) < 0 ) + goto error; + + /* get the dataspace handle */ + if ( (sid2 = H5Dget_space(did2)) < 0 ) + goto error; + + /* get rank */ + if ( (rank2 = H5Sget_simple_extent_ndims(sid2)) < 0 ) + goto error; + + /* get dimensions */ + if ( H5Sget_simple_extent_dims(sid1,dims1,maxdim1) < 0 ) + goto error; + + /* get dimensions */ + if ( H5Sget_simple_extent_dims(sid2,dims2,maxdim2) < 0 ) + goto error; + + /*------------------------------------------------------------------------- + * get the file data type + *------------------------------------------------------------------------- + */ + + /* get the data type */ + if ( (f_tid1 = H5Dget_type(did1)) < 0 ) + goto error; + + /* get the data type */ + if ( (f_tid2 = H5Dget_type(did2)) < 0 ) + goto error; + + /*------------------------------------------------------------------------- + * check for empty datasets + *------------------------------------------------------------------------- + */ + + storage_size1=H5Dget_storage_size(did1); + storage_size2=H5Dget_storage_size(did2); + if (storage_size1<0 || storage_size2<0) + goto error; + + if (storage_size1==0 || storage_size2==0) + { + if (options->m_verbose && obj1_name && obj2_name) + parallel_print("<%s> or <%s> are empty datasets\n", obj1_name, obj2_name); + cmp=0; + options->not_cmp=1; + } + + /*------------------------------------------------------------------------- + * check for comparable TYPE and SPACE + *------------------------------------------------------------------------- + */ + + if (diff_can_type(f_tid1, + f_tid2, + rank1, + rank2, + dims1, + dims2, + maxdim1, + maxdim2, + obj1_name, + obj2_name, + options)!=1) + { + cmp=0; + options->not_cmp=1; + } + + /*------------------------------------------------------------------------- + * memory type and sizes + *------------------------------------------------------------------------- + */ + if ((m_tid1=h5tools_get_native_type(f_tid1)) < 0) + goto error; + + if ((m_tid2=h5tools_get_native_type(f_tid2)) < 0) + goto error; + + m_size1 = H5Tget_size( m_tid1 ); + m_size2 = H5Tget_size( m_tid2 ); + + /*------------------------------------------------------------------------- + * check for different signed/unsigned types + *------------------------------------------------------------------------- + */ + + sign1=H5Tget_sign(m_tid1); + sign2=H5Tget_sign(m_tid2); + if ( sign1 != sign2 ) + { + if (options->m_verbose && obj1_name) + { + parallel_print("Comparison not supported: <%s> has sign %s ", obj1_name, get_sign(sign1)); + parallel_print("and <%s> has sign %s\n", obj2_name, get_sign(sign2)); + } + + cmp=0; + options->not_cmp=1; + } + + /*------------------------------------------------------------------------- + * only attempt to compare if possible + *------------------------------------------------------------------------- + */ + if (cmp) + { + + /*------------------------------------------------------------------------- + * get number of elements + *------------------------------------------------------------------------- + */ + nelmts1 = 1; + for (i = 0; i < rank1; i++) + { + nelmts1 *= dims1[i]; + } + + nelmts2 = 1; + for (i = 0; i < rank2; i++) + { + nelmts2 *= dims2[i]; + } + + assert(nelmts1==nelmts2); + + /*------------------------------------------------------------------------- + * "upgrade" the smaller memory size + *------------------------------------------------------------------------- + */ + + if ( m_size1 != m_size2 ) + { + if ( m_size1 < m_size2 ) + { + H5Tclose(m_tid1); + + if ((m_tid1=h5tools_get_native_type(f_tid2)) < 0) + goto error; + + m_size1 = H5Tget_size( m_tid1 ); + } + else + { + H5Tclose(m_tid2); + + if ((m_tid2=h5tools_get_native_type(f_tid1)) < 0) + goto error; + + m_size2 = H5Tget_size( m_tid2 ); + } + } + assert(m_size1==m_size2); + + /* print names */ + if (obj1_name) { + name1=diff_basename(obj1_name); + } + if (obj2_name) { + name2=diff_basename(obj2_name); + } + + + /*------------------------------------------------------------------------- + * read/compare + *------------------------------------------------------------------------- + */ + + need = (size_t)(nelmts1*m_size1); /* bytes needed */ + if ( need < H5TOOLS_MALLOCSIZE) + { + buf1 = HDmalloc(need); + buf2 = HDmalloc(need); + } + + if ( buf1!=NULL && buf2!=NULL) + { + if ( H5Dread(did1,m_tid1,H5S_ALL,H5S_ALL,H5P_DEFAULT,buf1) < 0 ) + goto error; + if ( H5Dread(did2,m_tid2,H5S_ALL,H5S_ALL,H5P_DEFAULT,buf2) < 0 ) + goto error; + + /* array diff */ + nfound = diff_array(buf1, + buf2, + nelmts1, + (hsize_t)0, + rank1, + dims1, + options, + name1, + name2, + m_tid1, + did1, + did2); + } + + else /* possibly not enough memory, read/compare by hyperslabs */ + + { + size_t p_type_nbytes = m_size1; /*size of memory type */ + hsize_t p_nelmts = nelmts1; /*total selected elmts */ + hsize_t elmtno; /*counter */ + int carry; /*counter carry value */ + unsigned int vl_data = 0; /*contains VL datatypes */ + + /* stripmine info */ + hsize_t sm_size[H5S_MAX_RANK]; /*stripmine size */ + hsize_t sm_nbytes; /*bytes per stripmine */ + hsize_t sm_nelmts; /*elements per stripmine*/ + hid_t sm_space; /*stripmine data space */ + + /* hyperslab info */ + hsize_t hs_offset[H5S_MAX_RANK]; /*starting offset */ + hsize_t hs_size[H5S_MAX_RANK]; /*size this pass */ + hsize_t hs_nelmts; /*elements in request */ + hsize_t zero[8]; /*vector of zeros */ + + /* check if we have VL data in the dataset's datatype */ + if (H5Tdetect_class(m_tid1, H5T_VLEN) == TRUE) + vl_data = TRUE; + + /* + * determine the strip mine size and allocate a buffer. The strip mine is + * a hyperslab whose size is manageable. + */ + sm_nbytes = p_type_nbytes; + + for (i = rank1; i > 0; --i) + { + sm_size[i - 1] = MIN(dims1[i - 1], H5TOOLS_BUFSIZE / sm_nbytes); + sm_nbytes *= sm_size[i - 1]; + assert(sm_nbytes > 0); + } + + sm_buf1 = malloc((size_t)sm_nbytes); + sm_buf2 = malloc((size_t)sm_nbytes); + + sm_nelmts = sm_nbytes / p_type_nbytes; + sm_space = H5Screate_simple(1, &sm_nelmts, NULL); + + /* the stripmine loop */ + memset(hs_offset, 0, sizeof hs_offset); + memset(zero, 0, sizeof zero); + + for (elmtno = 0; elmtno < p_nelmts; elmtno += hs_nelmts) + { + /* calculate the hyperslab size */ + if (rank1 > 0) + { + for (i = 0, hs_nelmts = 1; i < rank1; i++) + { + hs_size[i] = MIN(dims1[i] - hs_offset[i], sm_size[i]); + hs_nelmts *= hs_size[i]; + } + if (H5Sselect_hyperslab(sid1, H5S_SELECT_SET, hs_offset, NULL, hs_size, NULL) < 0) + goto error; + if (H5Sselect_hyperslab(sid2, H5S_SELECT_SET, hs_offset, NULL, hs_size, NULL) < 0) + goto error; + if (H5Sselect_hyperslab(sm_space, H5S_SELECT_SET, zero, NULL, &hs_nelmts, NULL) < 0) + goto error; + } + else + { + H5Sselect_all(sid1); + H5Sselect_all(sid2); + H5Sselect_all(sm_space); + hs_nelmts = 1; + } /* rank */ + + if ( H5Dread(did1,m_tid1,sm_space,sid1,H5P_DEFAULT,sm_buf1) < 0 ) + goto error; + if ( H5Dread(did2,m_tid2,sm_space,sid2,H5P_DEFAULT,sm_buf2) < 0 ) + goto error; + + /* get array differences. in the case of hyperslab read, increment the + number of differences found in each hyperslab and pass the + position at the beggining for printing + */ + nfound += diff_array(sm_buf1, + sm_buf2, + hs_nelmts, + elmtno, + rank1, + dims1, + options, + name1, + name2, + m_tid1, + did1, + did2); + + /* reclaim any VL memory, if necessary */ + if(vl_data) + { + H5Dvlen_reclaim(m_tid1, sm_space, H5P_DEFAULT, sm_buf1); + H5Dvlen_reclaim(m_tid1, sm_space, H5P_DEFAULT, sm_buf2); + } + + /* calculate the next hyperslab offset */ + for (i = rank1, carry = 1; i > 0 && carry; --i) + { + hs_offset[i - 1] += hs_size[i - 1]; + if (hs_offset[i - 1] == dims1[i - 1]) + hs_offset[i - 1] = 0; + else + carry = 0; + } /* i */ + } /* elmtno */ + + H5Sclose(sm_space); + /* free */ + if (sm_buf1!=NULL) + { + free(sm_buf1); + sm_buf1=NULL; + } + if (sm_buf2!=NULL) + { + free(sm_buf2); + sm_buf2=NULL; + } + + } /* hyperslab read */ + }/*cmp*/ + + /*------------------------------------------------------------------------- + * compare attributes + * the if condition refers to cases when the dataset is a referenced object + *------------------------------------------------------------------------- + */ + + if (obj1_name) + nfound += diff_attr(did1,did2,obj1_name,obj2_name,options); + + /*------------------------------------------------------------------------- + * close + *------------------------------------------------------------------------- + */ + + /* free */ + if (buf1!=NULL) + { + free(buf1); + buf1=NULL; } - - cmp=0; - options->not_cmp=1; - } - -/*------------------------------------------------------------------------- - * only attempt to compare if possible - *------------------------------------------------------------------------- - */ - if (cmp) - { - -/*------------------------------------------------------------------------- - * get number of elements - *------------------------------------------------------------------------- - */ - nelmts1 = 1; - for (i = 0; i < rank1; i++) - { - nelmts1 *= dims1[i]; - } - - nelmts2 = 1; - for (i = 0; i < rank2; i++) - { - nelmts2 *= dims2[i]; - } - - assert(nelmts1==nelmts2); - -/*------------------------------------------------------------------------- - * "upgrade" the smaller memory size - *------------------------------------------------------------------------- - */ - - if ( m_size1 != m_size2 ) - { - if ( m_size1 < m_size2 ) + if (buf2!=NULL) { - H5Tclose(m_tid1); - - if ((m_tid1=h5tools_get_native_type(f_tid2)) < 0) - goto error; - - m_size1 = H5Tget_size( m_tid1 ); + free(buf2); + buf2=NULL; } - else + if (sm_buf1!=NULL) { - H5Tclose(m_tid2); - - if ((m_tid2=h5tools_get_native_type(f_tid1)) < 0) - goto error; - - m_size2 = H5Tget_size( m_tid2 ); + free(sm_buf1); + sm_buf1=NULL; } - } - assert(m_size1==m_size2); - - /* print names */ - if (obj1_name) { - name1=diff_basename(obj1_name); - } - if (obj2_name) { - name2=diff_basename(obj2_name); - } - - -/*------------------------------------------------------------------------- - * read/compare - *------------------------------------------------------------------------- - */ - - need = (size_t)(nelmts1*m_size1); /* bytes needed */ - if ( need < H5TOOLS_MALLOCSIZE) - { - buf1 = HDmalloc(need); - buf2 = HDmalloc(need); - } - - if ( buf1!=NULL && buf2!=NULL) - { - if ( H5Dread(did1,m_tid1,H5S_ALL,H5S_ALL,H5P_DEFAULT,buf1) < 0 ) - goto error; - if ( H5Dread(did2,m_tid2,H5S_ALL,H5S_ALL,H5P_DEFAULT,buf2) < 0 ) - goto error; - - /* array diff */ - nfound = diff_array(buf1, - buf2, - nelmts1, - (hsize_t)0, - rank1, - dims1, - options, - name1, - name2, - m_tid1, - did1, - did2); - } - - else /* possibly not enough memory, read/compare by hyperslabs */ - - { - size_t p_type_nbytes = m_size1; /*size of memory type */ - hsize_t p_nelmts = nelmts1; /*total selected elmts */ - hsize_t elmtno; /*counter */ - int carry; /*counter carry value */ - unsigned int vl_data = 0; /*contains VL datatypes */ - - /* stripmine info */ - hsize_t sm_size[H5S_MAX_RANK]; /*stripmine size */ - hsize_t sm_nbytes; /*bytes per stripmine */ - hsize_t sm_nelmts; /*elements per stripmine*/ - hid_t sm_space; /*stripmine data space */ - - /* hyperslab info */ - hsize_t hs_offset[H5S_MAX_RANK]; /*starting offset */ - hsize_t hs_size[H5S_MAX_RANK]; /*size this pass */ - hsize_t hs_nelmts; /*elements in request */ - hsize_t zero[8]; /*vector of zeros */ - - /* check if we have VL data in the dataset's datatype */ - if (H5Tdetect_class(m_tid1, H5T_VLEN) == TRUE) - vl_data = TRUE; - - /* - * determine the strip mine size and allocate a buffer. The strip mine is - * a hyperslab whose size is manageable. - */ - sm_nbytes = p_type_nbytes; - - for (i = rank1; i > 0; --i) { - sm_size[i - 1] = MIN(dims1[i - 1], H5TOOLS_BUFSIZE / sm_nbytes); - sm_nbytes *= sm_size[i - 1]; - assert(sm_nbytes > 0); + if (sm_buf2!=NULL) + { + free(sm_buf2); + sm_buf2=NULL; } - sm_buf1 = malloc((size_t)sm_nbytes); - sm_buf2 = malloc((size_t)sm_nbytes); + H5E_BEGIN_TRY + { + H5Sclose(sid1); + H5Sclose(sid2); + H5Tclose(f_tid1); + H5Tclose(f_tid2); + H5Tclose(m_tid1); + H5Tclose(m_tid2); + } H5E_END_TRY; - sm_nelmts = sm_nbytes / p_type_nbytes; - sm_space = H5Screate_simple(1, &sm_nelmts, NULL); + return nfound; - /* the stripmine loop */ - memset(hs_offset, 0, sizeof hs_offset); - memset(zero, 0, sizeof zero); - - for (elmtno = 0; elmtno < p_nelmts; elmtno += hs_nelmts) - { - /* calculate the hyperslab size */ - if (rank1 > 0) - { - for (i = 0, hs_nelmts = 1; i < rank1; i++) - { - hs_size[i] = MIN(dims1[i] - hs_offset[i], sm_size[i]); - hs_nelmts *= hs_size[i]; - } - if (H5Sselect_hyperslab(sid1, H5S_SELECT_SET, hs_offset, NULL, hs_size, NULL) < 0) - goto error; - if (H5Sselect_hyperslab(sid2, H5S_SELECT_SET, hs_offset, NULL, hs_size, NULL) < 0) - goto error; - if (H5Sselect_hyperslab(sm_space, H5S_SELECT_SET, zero, NULL, &hs_nelmts, NULL) < 0) - goto error; - } - else - { - H5Sselect_all(sid1); - H5Sselect_all(sid2); - H5Sselect_all(sm_space); - hs_nelmts = 1; - } /* rank */ - - if ( H5Dread(did1,m_tid1,sm_space,sid1,H5P_DEFAULT,sm_buf1) < 0 ) - goto error; - if ( H5Dread(did2,m_tid2,sm_space,sid2,H5P_DEFAULT,sm_buf2) < 0 ) - goto error; - - /* get array differences. in the case of hyperslab read, increment the number of differences - found in each hyperslab and pass the position at the beggining for printing */ - nfound += diff_array(sm_buf1, - sm_buf2, - hs_nelmts, - elmtno, - rank1, - dims1, - options, - name1, - name2, - m_tid1, - did1, - did2); - - /* reclaim any VL memory, if necessary */ - if(vl_data) - { - H5Dvlen_reclaim(m_tid1, sm_space, H5P_DEFAULT, sm_buf1); - H5Dvlen_reclaim(m_tid1, sm_space, H5P_DEFAULT, sm_buf2); - } - - /* calculate the next hyperslab offset */ - for (i = rank1, carry = 1; i > 0 && carry; --i) - { - hs_offset[i - 1] += hs_size[i - 1]; - if (hs_offset[i - 1] == dims1[i - 1]) - hs_offset[i - 1] = 0; - else - carry = 0; - } /* i */ - } /* elmtno */ +error: + options->err_stat=1; - H5Sclose(sm_space); /* free */ + if (buf1!=NULL) + { + free(buf1); + buf1=NULL; + } + if (buf2!=NULL) + { + free(buf2); + buf2=NULL; + } if (sm_buf1!=NULL) { - free(sm_buf1); - sm_buf1=NULL; + free(sm_buf1); + sm_buf1=NULL; } if (sm_buf2!=NULL) { - free(sm_buf2); - sm_buf2=NULL; + free(sm_buf2); + sm_buf2=NULL; } - } /* hyperslab read */ - }/*cmp*/ - -/*------------------------------------------------------------------------- - * compare attributes - * the if condition refers to cases when the dataset is a referenced object - *------------------------------------------------------------------------- - */ - - if (obj1_name) - nfound += diff_attr(did1,did2,obj1_name,obj2_name,options); - -/*------------------------------------------------------------------------- - * close - *------------------------------------------------------------------------- - */ - - /* free */ - if (buf1!=NULL) - { - free(buf1); - buf1=NULL; - } - if (buf2!=NULL) - { - free(buf2); - buf2=NULL; - } - if (sm_buf1!=NULL) - { - free(sm_buf1); - sm_buf1=NULL; - } - if (sm_buf2!=NULL) - { - free(sm_buf2); - sm_buf2=NULL; - } - - H5E_BEGIN_TRY { - H5Sclose(sid1); - H5Sclose(sid2); - H5Tclose(f_tid1); - H5Tclose(f_tid2); - H5Tclose(m_tid1); - H5Tclose(m_tid2); - } H5E_END_TRY; - - return nfound; - -error: - options->err_stat=1; - - /* free */ - if (buf1!=NULL) - { - free(buf1); - buf1=NULL; - } - if (buf2!=NULL) - { - free(buf2); - buf2=NULL; - } - if (sm_buf1!=NULL) - { - free(sm_buf1); - sm_buf1=NULL; - } - if (sm_buf2!=NULL) - { - free(sm_buf2); - sm_buf2=NULL; - } - - /* disable error reporting */ - H5E_BEGIN_TRY { - H5Sclose(sid1); - H5Sclose(sid2); - H5Tclose(f_tid1); - H5Tclose(f_tid2); - H5Tclose(m_tid1); - H5Tclose(m_tid2); - /* enable error reporting */ - } H5E_END_TRY; - - return nfound; + /* disable error reporting */ + H5E_BEGIN_TRY + { + H5Sclose(sid1); + H5Sclose(sid2); + H5Tclose(f_tid1); + H5Tclose(f_tid2); + H5Tclose(m_tid1); + H5Tclose(m_tid2); + /* enable error reporting */ + } H5E_END_TRY; + + return nfound; } /*------------------------------------------------------------------------- @@ -677,163 +663,164 @@ int diff_can_type( hid_t f_tid1, /* file data type */ const char *obj2_name, diff_opt_t *options ) { - - - H5T_class_t tclass1; - H5T_class_t tclass2; - int maxdim_diff=0; /* maximum dimensions are different */ - int dim_diff=0; /* current dimensions are different */ - int i; - -/*------------------------------------------------------------------------- - * check for the same class - *------------------------------------------------------------------------- - */ - - if ((tclass1=H5Tget_class(f_tid1)) < 0) - return -1; - - if ((tclass2=H5Tget_class(f_tid2)) < 0) - return -1; - - if ( tclass1 != tclass2 ) - { - if (options->m_verbose && obj1_name) { - printf("Comparison not possible: <%s> is of class %s and <%s> is of class %s\n", - obj1_name, get_class(tclass1), - obj2_name, get_class(tclass2) ); - } - return 0; - } - -/*------------------------------------------------------------------------- - * check for non supported classes - *------------------------------------------------------------------------- - */ - - assert(tclass1==tclass2); - switch (tclass1) - { - case H5T_INTEGER: - case H5T_FLOAT: - case H5T_COMPOUND: - case H5T_STRING: - case H5T_ARRAY: - case H5T_BITFIELD: - case H5T_OPAQUE: - case H5T_ENUM: - case H5T_VLEN: - case H5T_REFERENCE: - - break; - - default: /*H5T_TIME */ - if (options->m_verbose && obj1_name ) - printf("Comparison not supported: <%s> and <%s> are of class %s\n", - obj1_name,obj2_name,get_class(tclass2) ); - return 0; - } - -/*------------------------------------------------------------------------- - * check for equal file datatype; warning only - *------------------------------------------------------------------------- - */ - - if ( (H5Tequal(f_tid1, f_tid2)==0) && options->m_verbose && obj1_name) - { - printf("Warning: different storage datatype\n"); - printf("<%s> has file datatype ", obj1_name); - print_type(f_tid1); - printf("\n"); - printf("<%s> has file datatype ", obj2_name); - print_type(f_tid2); - printf("\n"); - } - -/*------------------------------------------------------------------------- - * check for the same rank - *------------------------------------------------------------------------- - */ - - if ( rank1 != rank2 ) - { - if (options->m_verbose && obj1_name) { - printf("Comparison not supported: <%s> has rank %d, dimensions ", obj1_name, rank1); - print_dimensions(rank1,dims1); - printf(", max dimensions "); - print_dimensions(rank1,maxdim1); - printf("\n" ); - printf("<%s> has rank %d, dimensions ", obj2_name, rank2); - print_dimensions(rank2,dims2); - printf(", max dimensions "); - print_dimensions(rank2,maxdim2); - } - return 0; - } - -/*------------------------------------------------------------------------- - * check for different dimensions - *------------------------------------------------------------------------- - */ - - assert(rank1==rank2); - for ( i=0; i<rank1; i++) - { - if (maxdim1 && maxdim2) - { - if ( maxdim1[i] != maxdim2[i] ) - maxdim_diff=1; - } - if ( dims1[i] != dims2[i] ) - dim_diff=1; - } - -/*------------------------------------------------------------------------- - * current dimensions - *------------------------------------------------------------------------- - */ - - if (dim_diff==1) - { - if (options->m_verbose && obj1_name) { - printf("Comparison not supported: <%s> has rank %d, dimensions ", obj1_name, rank1); - print_dimensions(rank1,dims1); - if (maxdim1 && maxdim2) { - printf(", max dimensions "); - print_dimensions(rank1,maxdim1); - printf("\n" ); - printf("<%s> has rank %d, dimensions ", obj2_name, rank2); - print_dimensions(rank2,dims2); - printf(", max dimensions "); - print_dimensions(rank2,maxdim2); - } - } - return 0; - } - -/*------------------------------------------------------------------------- - * maximum dimensions; just give a warning - *------------------------------------------------------------------------- - */ - if (maxdim1 && maxdim2 && maxdim_diff==1 && obj1_name ) - { - if (options->m_verbose) { - printf( "Warning: different maximum dimensions\n"); - printf("<%s> has max dimensions ", obj1_name); - print_dimensions(rank1,maxdim1); - printf("\n"); - printf("<%s> has max dimensions ", obj2_name); - print_dimensions(rank2,maxdim2); - printf("\n"); - } - } - - return 1; + H5T_class_t tclass1; + H5T_class_t tclass2; + int maxdim_diff=0; /* maximum dimensions are different */ + int dim_diff=0; /* current dimensions are different */ + int i; + + /*------------------------------------------------------------------------- + * check for the same class + *------------------------------------------------------------------------- + */ + + if ((tclass1=H5Tget_class(f_tid1)) < 0) + return -1; + + if ((tclass2=H5Tget_class(f_tid2)) < 0) + return -1; + + if ( tclass1 != tclass2 ) + { + if (options->m_verbose && obj1_name) + { + printf("Comparison not possible: <%s> is of class %s and <%s> is of class %s\n", + obj1_name, get_class(tclass1), + obj2_name, get_class(tclass2) ); + } + return 0; + } + + /*------------------------------------------------------------------------- + * check for non supported classes + *------------------------------------------------------------------------- + */ + + assert(tclass1==tclass2); + switch (tclass1) + { + case H5T_INTEGER: + case H5T_FLOAT: + case H5T_COMPOUND: + case H5T_STRING: + case H5T_ARRAY: + case H5T_BITFIELD: + case H5T_OPAQUE: + case H5T_ENUM: + case H5T_VLEN: + case H5T_REFERENCE: + + break; + + default: /*H5T_TIME */ + if (options->m_verbose && obj1_name ) + printf("Comparison not supported: <%s> and <%s> are of class %s\n", + obj1_name,obj2_name,get_class(tclass2) ); + return 0; + } + + /*------------------------------------------------------------------------- + * check for equal file datatype; warning only + *------------------------------------------------------------------------- + */ + + if ( (H5Tequal(f_tid1, f_tid2)==0) && options->m_verbose && obj1_name) + { + printf("Warning: different storage datatype\n"); + printf("<%s> has file datatype ", obj1_name); + print_type(f_tid1); + printf("\n"); + printf("<%s> has file datatype ", obj2_name); + print_type(f_tid2); + printf("\n"); + } + + /*------------------------------------------------------------------------- + * check for the same rank + *------------------------------------------------------------------------- + */ + + if ( rank1 != rank2 ) + { + if (options->m_verbose && obj1_name) + { + printf("Comparison not supported: <%s> has rank %d, dimensions ", obj1_name, rank1); + print_dimensions(rank1,dims1); + printf(", max dimensions "); + print_dimensions(rank1,maxdim1); + printf("\n" ); + printf("<%s> has rank %d, dimensions ", obj2_name, rank2); + print_dimensions(rank2,dims2); + printf(", max dimensions "); + print_dimensions(rank2,maxdim2); + } + return 0; + } + + /*------------------------------------------------------------------------- + * check for different dimensions + *------------------------------------------------------------------------- + */ + + assert(rank1==rank2); + for ( i=0; i<rank1; i++) + { + if (maxdim1 && maxdim2) + { + if ( maxdim1[i] != maxdim2[i] ) + maxdim_diff=1; + } + if ( dims1[i] != dims2[i] ) + dim_diff=1; + } + + /*------------------------------------------------------------------------- + * current dimensions + *------------------------------------------------------------------------- + */ + + if (dim_diff==1) + { + if (options->m_verbose && obj1_name) + { + printf("Comparison not supported: <%s> has rank %d, dimensions ", obj1_name, rank1); + print_dimensions(rank1,dims1); + if (maxdim1 && maxdim2) + { + printf(", max dimensions "); + print_dimensions(rank1,maxdim1); + printf("\n" ); + printf("<%s> has rank %d, dimensions ", obj2_name, rank2); + print_dimensions(rank2,dims2); + printf(", max dimensions "); + print_dimensions(rank2,maxdim2); + } + } + return 0; + } + + /*------------------------------------------------------------------------- + * maximum dimensions; just give a warning + *------------------------------------------------------------------------- + */ + if (maxdim1 && maxdim2 && maxdim_diff==1 && obj1_name ) + { + if (options->m_verbose) + { + printf( "Warning: different maximum dimensions\n"); + printf("<%s> has max dimensions ", obj1_name); + print_dimensions(rank1,maxdim1); + printf("\n"); + printf("<%s> has max dimensions ", obj2_name); + print_dimensions(rank2,maxdim2); + printf("\n"); + } + } + + return 1; } - - /*------------------------------------------------------------------------- * Function: print_sizes * @@ -887,3 +874,29 @@ void print_sizes( const char *obj1, printf("\n"); } #endif /* H5DIFF_DEBUG */ + +/*------------------------------------------------------------------------- + * Function: print_size + * + * Purpose: print dimensions + * + *------------------------------------------------------------------------- + */ +#if defined (H5DIFF_DEBUG) +static void +print_size (int rank, hsize_t *dims) +{ + int i; + + parallel_print("[" ); + for ( i = 0; i < rank-1; i++) + { + parallel_print("%"H5_PRINTF_LL_WIDTH"u", (unsigned long_long)dims[i]); + parallel_print("x"); + } + parallel_print("%"H5_PRINTF_LL_WIDTH"u", (unsigned long_long)dims[rank-1]); + parallel_print("]\n" ); + +} +#endif /* H5DIFF_DEBUG */ + diff --git a/tools/lib/h5diff_util.c b/tools/lib/h5diff_util.c index 9e9c556..4cddbfb 100644 --- a/tools/lib/h5diff_util.c +++ b/tools/lib/h5diff_util.c @@ -131,91 +131,91 @@ print_dimensions (int rank, hsize_t *dims) */ void print_type(hid_t type) { - switch (H5Tget_class(type)) - { - default: - return; - case H5T_INTEGER: - if (H5Tequal(type, H5T_STD_I8BE)) { - printf("H5T_STD_I8BE"); - } else if (H5Tequal(type, H5T_STD_I8LE)) { - printf("H5T_STD_I8LE"); - } else if (H5Tequal(type, H5T_STD_I16BE)) { - printf("H5T_STD_I16BE"); - } else if (H5Tequal(type, H5T_STD_I16LE)) { - printf("H5T_STD_I16LE"); - } else if (H5Tequal(type, H5T_STD_I32BE)) { - printf("H5T_STD_I32BE"); - } else if (H5Tequal(type, H5T_STD_I32LE)) { - printf("H5T_STD_I32LE"); - } else if (H5Tequal(type, H5T_STD_I64BE)) { - printf("H5T_STD_I64BE"); - } else if (H5Tequal(type, H5T_STD_I64LE)) { - printf("H5T_STD_I64LE"); - } else if (H5Tequal(type, H5T_STD_U8BE)) { - printf("H5T_STD_U8BE"); - } else if (H5Tequal(type, H5T_STD_U8LE)) { - printf("H5T_STD_U8LE"); - } else if (H5Tequal(type, H5T_STD_U16BE)) { - printf("H5T_STD_U16BE"); - } else if (H5Tequal(type, H5T_STD_U16LE)) { - printf("H5T_STD_U16LE"); - } else if (H5Tequal(type, H5T_STD_U32BE)) { - printf("H5T_STD_U32BE"); - } else if (H5Tequal(type, H5T_STD_U32LE)) { - printf("H5T_STD_U32LE"); - } else if (H5Tequal(type, H5T_STD_U64BE)) { - printf("H5T_STD_U64BE"); - } else if (H5Tequal(type, H5T_STD_U64LE)) { - printf("H5T_STD_U64LE"); - } else if (H5Tequal(type, H5T_NATIVE_SCHAR)) { - printf("H5T_NATIVE_SCHAR"); - } else if (H5Tequal(type, H5T_NATIVE_UCHAR)) { - printf("H5T_NATIVE_UCHAR"); - } else if (H5Tequal(type, H5T_NATIVE_SHORT)) { - printf("H5T_NATIVE_SHORT"); - } else if (H5Tequal(type, H5T_NATIVE_USHORT)) { - printf("H5T_NATIVE_USHORT"); - } else if (H5Tequal(type, H5T_NATIVE_INT)) { - printf("H5T_NATIVE_INT"); - } else if (H5Tequal(type, H5T_NATIVE_UINT)) { - printf("H5T_NATIVE_UINT"); - } else if (H5Tequal(type, H5T_NATIVE_LONG)) { - printf("H5T_NATIVE_LONG"); - } else if (H5Tequal(type, H5T_NATIVE_ULONG)) { - printf("H5T_NATIVE_ULONG"); - } else if (H5Tequal(type, H5T_NATIVE_LLONG)) { - printf("H5T_NATIVE_LLONG"); - } else if (H5Tequal(type, H5T_NATIVE_ULLONG)) { - printf("H5T_NATIVE_ULLONG"); - } else { - printf("undefined integer"); - } - break; - - case H5T_FLOAT: - if (H5Tequal(type, H5T_IEEE_F32BE)) { - printf("H5T_IEEE_F32BE"); - } else if (H5Tequal(type, H5T_IEEE_F32LE)) { - printf("H5T_IEEE_F32LE"); - } else if (H5Tequal(type, H5T_IEEE_F64BE)) { - printf("H5T_IEEE_F64BE"); - } else if (H5Tequal(type, H5T_IEEE_F64LE)) { - printf("H5T_IEEE_F64LE"); - } else if (H5Tequal(type, H5T_NATIVE_FLOAT)) { - printf("H5T_NATIVE_FLOAT"); - } else if (H5Tequal(type, H5T_NATIVE_DOUBLE)) { - printf("H5T_NATIVE_DOUBLE"); + switch (H5Tget_class(type)) + { + default: + return; + case H5T_INTEGER: + if (H5Tequal(type, H5T_STD_I8BE)) { + printf("H5T_STD_I8BE"); + } else if (H5Tequal(type, H5T_STD_I8LE)) { + printf("H5T_STD_I8LE"); + } else if (H5Tequal(type, H5T_STD_I16BE)) { + printf("H5T_STD_I16BE"); + } else if (H5Tequal(type, H5T_STD_I16LE)) { + printf("H5T_STD_I16LE"); + } else if (H5Tequal(type, H5T_STD_I32BE)) { + printf("H5T_STD_I32BE"); + } else if (H5Tequal(type, H5T_STD_I32LE)) { + printf("H5T_STD_I32LE"); + } else if (H5Tequal(type, H5T_STD_I64BE)) { + printf("H5T_STD_I64BE"); + } else if (H5Tequal(type, H5T_STD_I64LE)) { + printf("H5T_STD_I64LE"); + } else if (H5Tequal(type, H5T_STD_U8BE)) { + printf("H5T_STD_U8BE"); + } else if (H5Tequal(type, H5T_STD_U8LE)) { + printf("H5T_STD_U8LE"); + } else if (H5Tequal(type, H5T_STD_U16BE)) { + printf("H5T_STD_U16BE"); + } else if (H5Tequal(type, H5T_STD_U16LE)) { + printf("H5T_STD_U16LE"); + } else if (H5Tequal(type, H5T_STD_U32BE)) { + printf("H5T_STD_U32BE"); + } else if (H5Tequal(type, H5T_STD_U32LE)) { + printf("H5T_STD_U32LE"); + } else if (H5Tequal(type, H5T_STD_U64BE)) { + printf("H5T_STD_U64BE"); + } else if (H5Tequal(type, H5T_STD_U64LE)) { + printf("H5T_STD_U64LE"); + } else if (H5Tequal(type, H5T_NATIVE_SCHAR)) { + printf("H5T_NATIVE_SCHAR"); + } else if (H5Tequal(type, H5T_NATIVE_UCHAR)) { + printf("H5T_NATIVE_UCHAR"); + } else if (H5Tequal(type, H5T_NATIVE_SHORT)) { + printf("H5T_NATIVE_SHORT"); + } else if (H5Tequal(type, H5T_NATIVE_USHORT)) { + printf("H5T_NATIVE_USHORT"); + } else if (H5Tequal(type, H5T_NATIVE_INT)) { + printf("H5T_NATIVE_INT"); + } else if (H5Tequal(type, H5T_NATIVE_UINT)) { + printf("H5T_NATIVE_UINT"); + } else if (H5Tequal(type, H5T_NATIVE_LONG)) { + printf("H5T_NATIVE_LONG"); + } else if (H5Tequal(type, H5T_NATIVE_ULONG)) { + printf("H5T_NATIVE_ULONG"); + } else if (H5Tequal(type, H5T_NATIVE_LLONG)) { + printf("H5T_NATIVE_LLONG"); + } else if (H5Tequal(type, H5T_NATIVE_ULLONG)) { + printf("H5T_NATIVE_ULLONG"); + } else { + printf("undefined integer"); + } + break; + + case H5T_FLOAT: + if (H5Tequal(type, H5T_IEEE_F32BE)) { + printf("H5T_IEEE_F32BE"); + } else if (H5Tequal(type, H5T_IEEE_F32LE)) { + printf("H5T_IEEE_F32LE"); + } else if (H5Tequal(type, H5T_IEEE_F64BE)) { + printf("H5T_IEEE_F64BE"); + } else if (H5Tequal(type, H5T_IEEE_F64LE)) { + printf("H5T_IEEE_F64LE"); + } else if (H5Tequal(type, H5T_NATIVE_FLOAT)) { + printf("H5T_NATIVE_FLOAT"); + } else if (H5Tequal(type, H5T_NATIVE_DOUBLE)) { + printf("H5T_NATIVE_DOUBLE"); #if H5_SIZEOF_LONG_DOUBLE !=0 - } else if (H5Tequal(type, H5T_NATIVE_LDOUBLE)) { - printf("H5T_NATIVE_LDOUBLE"); + } else if (H5Tequal(type, H5T_NATIVE_LDOUBLE)) { + printf("H5T_NATIVE_LDOUBLE"); #endif - } else { - printf("undefined float"); - } - break; - - }/*switch*/ + } else { + printf("undefined float"); + } + break; + + }/*switch*/ } /*------------------------------------------------------------------------- @@ -232,21 +232,21 @@ void print_type(hid_t type) const char* diff_basename(const char *name) { - size_t i; - - if (name==NULL) - return NULL; - - /* Find the end of the base name */ - i = strlen(name); - while (i>0 && '/'==name[i-1]) - --i; - - /* Skip backward over base name */ - while (i>0 && '/'!=name[i-1]) - --i; - - return(name+i); + size_t i; + + if (name==NULL) + return NULL; + + /* Find the end of the base name */ + i = strlen(name); + while (i>0 && '/'==name[i-1]) + --i; + + /* Skip backward over base name */ + while (i>0 && '/'!=name[i-1]) + --i; + + return(name+i); } /*------------------------------------------------------------------------- @@ -295,15 +295,15 @@ get_type(h5trav_type_t type) const char* get_sign(H5T_sign_t sign) { - switch (sign) - { - default: - return("H5T_SGN_ERROR"); - case H5T_SGN_NONE: - return("H5T_SGN_NONE"); - case H5T_SGN_2: - return("H5T_SGN_2"); - } + switch (sign) + { + default: + return("H5T_SGN_ERROR"); + case H5T_SGN_NONE: + return("H5T_SGN_NONE"); + case H5T_SGN_2: + return("H5T_SGN_2"); + } } @@ -321,33 +321,33 @@ get_sign(H5T_sign_t sign) const char* get_class(H5T_class_t tclass) { - switch (tclass) - { - default: - return("Invalid class"); - case H5T_TIME: - return("H5T_TIME"); - case H5T_INTEGER: - return("H5T_INTEGER"); - case H5T_FLOAT: - return("H5T_FLOAT"); - case H5T_STRING: - return("H5T_STRING"); - case H5T_BITFIELD: - return("H5T_BITFIELD"); - case H5T_OPAQUE: - return("H5T_OPAQUE"); - case H5T_COMPOUND: - return("H5T_COMPOUND"); - case H5T_REFERENCE: - return("H5T_REFERENCE"); - case H5T_ENUM: - return("H5T_ENUM"); - case H5T_VLEN: - return("H5T_VLEN"); - case H5T_ARRAY: - return("H5T_ARRAY"); - } + switch (tclass) + { + default: + return("Invalid class"); + case H5T_TIME: + return("H5T_TIME"); + case H5T_INTEGER: + return("H5T_INTEGER"); + case H5T_FLOAT: + return("H5T_FLOAT"); + case H5T_STRING: + return("H5T_STRING"); + case H5T_BITFIELD: + return("H5T_BITFIELD"); + case H5T_OPAQUE: + return("H5T_OPAQUE"); + case H5T_COMPOUND: + return("H5T_COMPOUND"); + case H5T_REFERENCE: + return("H5T_REFERENCE"); + case H5T_ENUM: + return("H5T_ENUM"); + case H5T_VLEN: + return("H5T_VLEN"); + case H5T_ARRAY: + return("H5T_ARRAY"); + } } /*------------------------------------------------------------------------- diff --git a/tools/lib/h5tools.c b/tools/lib/h5tools.c index 6fc09d7..120d433 100644 --- a/tools/lib/h5tools.c +++ b/tools/lib/h5tools.c @@ -538,29 +538,31 @@ h5tools_dump_simple_data(FILE *stream, const h5tool_format_t *info, hid_t contai hsize_t nelmts, hid_t type, void *_mem) { unsigned char *mem = (unsigned char*)_mem; - hsize_t i; /*element counter */ - char *s, *section; /*a section of output */ - int secnum; /*section sequence number */ - size_t size; /*size of each datum */ - size_t ncols = 80; /*available output width */ - h5tools_str_t buffer; /*string into which to render */ - int multiline; /*datum was multiline */ - hsize_t curr_pos; /* total data element position */ - int elmt_counter = 0;/*counts the # elements printed. - *I (ptl?) needed something that - *isn't going to get reset when a new - *line is formed. I'm going to use - *this var to count elements and - *break after we see a number equal - *to the ctx->size_last_dim. */ + hsize_t i; /*element counter */ + char *s; + char *section; /*a section of output */ + int secnum; /*section sequence number */ + size_t size; /*size of each datum */ + size_t ncols = 80; /*available output width */ + h5tools_str_t buffer; /*string into which to render */ + int multiline; /*datum was multiline */ + hsize_t curr_pos; /* total data element position */ + int elmt_counter = 0;/*counts the # elements printed. + *I (ptl?) needed something that + *isn't going to get reset when a new + *line is formed. I'm going to use + *this var to count elements and + *break after we see a number equal + *to the ctx->size_last_dim. */ /* binary dump */ - if(bin_output) { + if(bin_output) + { do_bin_output(stream, nelmts, type, _mem); - bin_output = 0; } /* end if */ - else { - /* Setup */ + else + { + /* setup */ HDmemset(&buffer, 0, sizeof(h5tools_str_t)); size = H5Tget_size(type); @@ -613,7 +615,7 @@ h5tools_dump_simple_data(FILE *stream, const h5tool_format_t *info, hid_t contai } /* - * We need to break after each row_counter of a dimension---> we should + * We need to break after each row of a dimension---> we should * break at the end of the each last dimension well that is the * way the dumper did it before */ |