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authorDana Robinson <derobins@hdfgroup.org>2020-08-01 16:18:18 (GMT)
committerDana Robinson <derobins@hdfgroup.org>2020-08-01 16:18:18 (GMT)
commit1ae6daaa807f2bfd63076215950d9c412bfa08d7 (patch)
treed60f5aa4158d275f953561b47089add1ea76ecd2 /tools/src/h5dump
parent0a64f3e8106a1ced78ae7c4a6744b3509d7ca0fc (diff)
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Diffstat (limited to 'tools/src/h5dump')
-rw-r--r--tools/src/h5dump/h5dump.c397
-rw-r--r--tools/src/h5dump/h5dump.h39
-rw-r--r--tools/src/h5dump/h5dump_ddl.c106
-rw-r--r--tools/src/h5dump/h5dump_extern.h43
-rw-r--r--tools/src/h5dump/h5dump_xml.c82
5 files changed, 314 insertions, 353 deletions
diff --git a/tools/src/h5dump/h5dump.c b/tools/src/h5dump/h5dump.c
index d9ea4b0..2b21b1c 100644
--- a/tools/src/h5dump/h5dump.c
+++ b/tools/src/h5dump/h5dump.c
@@ -18,30 +18,35 @@
/* Name of tool */
#define PROGRAMNAME "h5dump"
-static const char *driver = NULL; /* The driver to open the file with. */
-const char *outfname=NULL;
-static int doxml = 0;
-static int useschema = 1;
-static const char *xml_dtd_uri = NULL;
+static const char *driver_name_g = NULL; /* The driver to open the file with. */
+const char *outfname_g = NULL;
+static hbool_t doxml_g = FALSE;
+static hbool_t useschema_g = TRUE;
+static const char *xml_dtd_uri_g = NULL;
+
+static hbool_t use_custom_vol_g = FALSE;
+static h5tools_vol_info_t vol_info_g;
#ifdef H5_HAVE_ROS3_VFD
-static H5FD_ros3_fapl_t ros3_fa = {
- 1, /* version */
- false, /* authenticate */
- "", /* aws region */
- "", /* access key id */
- "", /* secret access key */
+/* Default "anonymous" S3 configuration */
+static H5FD_ros3_fapl_t ros3_fa_g = {
+ 1, /* Structure Version */
+ false, /* Authenticate? */
+ "", /* AWS Region */
+ "", /* Access Key ID */
+ "", /* Secret Access Key */
};
#endif /* H5_HAVE_ROS3_VFD */
#ifdef H5_HAVE_LIBHDFS
-static H5FD_hdfs_fapl_t hdfs_fa = {
- 1, /* fapl version */
- "localhost", /* namenode name */
- 0, /* namenode port */
- "", /* kerberos ticket cache */
- "", /* user name */
- 2048, /* stream buffer size */
+/* "Default" HDFS configuration */
+static H5FD_hdfs_fapl_t hdfs_fa_g = {
+ 1, /* Structure Version */
+ "localhost", /* Namenode Name */
+ 0, /* Namenode Port */
+ "", /* Kerberos ticket cache */
+ "", /* User name */
+ 2048, /* Stream buffer size */
};
#endif /* H5_HAVE_LIBHDFS */
@@ -211,6 +216,9 @@ static struct long_options l_opts[] = {
{ "vds-gap-size", require_arg, 'G' },
{ "s3-cred", require_arg, '$' },
{ "hdfs-attrs", require_arg, '#' },
+ { "vol-value", require_arg, '1' },
+ { "vol-name", require_arg, '2' },
+ { "vol-info", require_arg, '3' },
{ NULL, 0, '\0' }
};
@@ -268,6 +276,12 @@ usage(const char *prog)
PRINTVALSTREAM(rawoutstream, " <kerberos cache path>,<username>,\n");
PRINTVALSTREAM(rawoutstream, " <buffer size>)\n");
PRINTVALSTREAM(rawoutstream, " Any absent attribute will use a default value.\n");
+ PRINTVALSTREAM(rawoutstream, " --vol-value Value (ID) of the VOL connector to use for opening the\n");
+ PRINTVALSTREAM(rawoutstream, " HDF5 file specified\n");
+ PRINTVALSTREAM(rawoutstream, " --vol-name Name of the VOL connector to use for opening the\n");
+ PRINTVALSTREAM(rawoutstream, " HDF5 file specified\n");
+ PRINTVALSTREAM(rawoutstream, " --vol-info VOL-specific info to pass to the VOL connector used for\n");
+ PRINTVALSTREAM(rawoutstream, " opening the HDF5 file specified\n");
PRINTVALSTREAM(rawoutstream, "--------------- Object Options ---------------\n");
PRINTVALSTREAM(rawoutstream, " -a P, --attribute=P Print the specified attribute\n");
PRINTVALSTREAM(rawoutstream, " If an attribute name contains a slash (/), escape the\n");
@@ -641,12 +655,12 @@ parse_hsize_list(const char *h_list, subset_d *d)
*-------------------------------------------------------------------------
*/
static struct subset_t *
-parse_subset_params(char *dset)
+parse_subset_params(const char *dset)
{
struct subset_t *s = NULL;
char *brace;
- if (!disable_compact_subset && ((brace = HDstrrchr(dset, '[')) != NULL)) {
+ if (!dump_opts.disable_compact_subset && ((brace = HDstrrchr(dset, '[')) != NULL)) {
*brace++ = '\0';
s = (struct subset_t *)HDcalloc(1, sizeof(struct subset_t));
@@ -877,50 +891,50 @@ parse_command_line(int argc, const char *argv[])
parse_start:
switch ((char)opt) {
case 'R':
- display_region = TRUE;
+ dump_opts.display_region = TRUE;
region_output = TRUE;
break;
case 'B':
- display_bb = TRUE;
+ dump_opts.display_bb = TRUE;
last_was_dset = FALSE;
break;
case 'n':
- display_fi = TRUE;
+ dump_opts.display_fi = TRUE;
last_was_dset = FALSE;
if (opt_arg != NULL)
h5trav_set_verbose(HDatoi(opt_arg));
break;
case 'p':
- display_dcpl = TRUE;
+ dump_opts.display_dcpl = TRUE;
break;
case 'y':
- display_ai = FALSE;
+ dump_opts.display_ai = FALSE;
break;
case 'e':
- display_escape = TRUE;
+ dump_opts.display_escape = TRUE;
break;
case 'H':
- display_data = FALSE;
- display_attr_data = FALSE;
+ dump_opts.display_data = FALSE;
+ dump_opts.display_attr_data = FALSE;
last_was_dset = FALSE;
break;
case 'A':
if (opt_arg != NULL) {
if(0 == HDatoi(opt_arg))
- include_attrs = FALSE;
+ dump_opts.include_attrs = FALSE;
}
else {
- display_data = FALSE;
- display_attr_data = TRUE;
+ dump_opts.display_data = FALSE;
+ dump_opts.display_attr_data = TRUE;
last_was_dset = FALSE;
}
break;
case 'i':
- display_oid = TRUE;
+ dump_opts.display_oid = TRUE;
last_was_dset = FALSE;
break;
case 'r':
- display_char = TRUE;
+ dump_opts.display_char = TRUE;
break;
case 'V':
print_version(h5tools_getprogname());
@@ -941,7 +955,7 @@ parse_start:
}
break;
case 'N':
- display_all = 0;
+ dump_opts.display_all = 0;
for (i = 0; i < argc; i++)
if (!hand[i].func) {
@@ -953,7 +967,7 @@ parse_start:
last_was_dset = FALSE;
break;
case 'a':
- display_all = 0;
+ dump_opts.display_all = 0;
for (i = 0; i < argc; i++)
if (!hand[i].func) {
@@ -965,7 +979,7 @@ parse_start:
last_was_dset = FALSE;
break;
case 'd':
- display_all = 0;
+ dump_opts.display_all = 0;
for (i = 0; i < argc; i++)
if (!hand[i].func) {
@@ -979,10 +993,10 @@ parse_start:
last_was_dset = TRUE;
break;
case 'f':
- driver = opt_arg;
+ driver_name_g = opt_arg;
break;
case 'g':
- display_all = 0;
+ dump_opts.display_all = 0;
for (i = 0; i < argc; i++)
if (!hand[i].func) {
@@ -994,7 +1008,7 @@ parse_start:
last_was_dset = FALSE;
break;
case 'l':
- display_all = 0;
+ dump_opts.display_all = 0;
for (i = 0; i < argc; i++)
if (!hand[i].func) {
@@ -1006,7 +1020,7 @@ parse_start:
last_was_dset = FALSE;
break;
case 't':
- display_all = 0;
+ dump_opts.display_all = 0;
for (i = 0; i < argc; i++)
if (!hand[i].func) {
@@ -1033,13 +1047,13 @@ parse_start:
}
}
else {
- if(display_attr_data && !display_data) {
+ if(dump_opts.display_attr_data && !dump_opts.display_data) {
if (h5tools_set_attr_output_file(opt_arg, 0) < 0) {
usage(h5tools_getprogname());
goto error;
}
}
- if(display_data || display_all) {
+ if(dump_opts.display_data || dump_opts.display_all) {
if (h5tools_set_data_output_file(opt_arg, 0) < 0) {
usage(h5tools_getprogname());
goto error;
@@ -1047,9 +1061,9 @@ parse_start:
}
}
- usingdasho = TRUE;
+ dump_opts.usingdasho = TRUE;
last_was_dset = FALSE;
- outfname = opt_arg;
+ outfname_g = opt_arg;
break;
case 'b':
@@ -1061,8 +1075,8 @@ parse_start:
}
}
bin_output = TRUE;
- if (outfname!=NULL) {
- if (h5tools_set_data_output_file(outfname, 1) < 0) {
+ if (outfname_g != NULL) {
+ if (h5tools_set_data_output_file(outfname_g, 1) < 0) {
/* failed to set output file */
usage(h5tools_getprogname());
goto error;
@@ -1097,14 +1111,14 @@ parse_start:
usage(h5tools_getprogname());
goto error;
}
- display_packed_bits = TRUE;
+ dump_opts.display_packed_bits = TRUE;
break;
case 'v':
- display_vds_first = TRUE;
+ dump_opts.display_vds_first = TRUE;
break;
case 'G':
- vds_gap_size = HDatoi(opt_arg);
- if (vds_gap_size < 0) {
+ dump_opts.vds_gap_size = HDatoi(opt_arg);
+ if (dump_opts.vds_gap_size < 0) {
usage(h5tools_getprogname());
goto error;
}
@@ -1113,15 +1127,15 @@ parse_start:
/** begin XML parameters **/
case 'x':
/* select XML output */
- doxml = TRUE;
- useschema = TRUE;
+ doxml_g = TRUE;
+ useschema_g = TRUE;
h5tools_dump_header_format = NULL;
dump_function_table = &xml_function_table;
h5tools_nCols = 0;
break;
case 'u':
- doxml = TRUE;
- useschema = FALSE;
+ doxml_g = TRUE;
+ useschema_g = FALSE;
xmlnsprefix = "";
h5tools_dump_header_format = NULL;
dump_function_table = &xml_function_table;
@@ -1130,7 +1144,7 @@ parse_start:
case 'D':
/* specify alternative XML DTD or schema */
/* To Do: check format of this value? */
- xml_dtd_uri = opt_arg;
+ xml_dtd_uri_g = opt_arg;
h5tools_nCols = 0;
break;
@@ -1143,7 +1157,7 @@ parse_start:
case 'X':
/* specify XML namespace (default="hdf5:"), or none */
/* To Do: check format of this value? */
- if (!useschema) {
+ if (!useschema_g) {
usage(h5tools_getprogname());
goto error;
}
@@ -1241,7 +1255,7 @@ end_collect:
enable_error_stack = 1;
break;
case 'C':
- disable_compact_subset = TRUE;
+ dump_opts.disable_compact_subset = TRUE;
break;
case 'h':
usage(h5tools_getprogname());
@@ -1251,106 +1265,53 @@ end_collect:
goto done;
case '$':
-#ifndef H5_HAVE_ROS3_VFD
+#ifdef H5_HAVE_ROS3_VFD
+ if (h5tools_parse_ros3_fapl_tuple(opt_arg, ',', &ros3_fa_g) < 0) {
+ error_msg("failed to parse S3 VFD credential info\n");
+ usage(h5tools_getprogname());
+ free_handler(hand, argc);
+ hand = NULL;
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
+ }
+#else
error_msg("Read-Only S3 VFD not enabled.\n");
h5tools_setstatus(EXIT_FAILURE);
goto done;
-#else
- /* s3 credential */
- {
- char **s3_cred = NULL;
- char *s3_cred_string = NULL;
- const char *ccred[3];
- unsigned nelems = 0;
- if (FAIL == parse_tuple(opt_arg, ',', &s3_cred_string, &nelems, &s3_cred)) {
- error_msg("unable to parse malformed s3 credentials\n");
- usage(h5tools_getprogname());
- free_handler(hand, argc);
- hand = NULL;
- h5tools_setstatus(EXIT_FAILURE);
- goto done;
- }
- if (nelems != 3) {
- error_msg("s3 credentials expects 3 elements\n");
- usage(h5tools_getprogname());
- free_handler(hand, argc);
- hand = NULL;
- h5tools_setstatus(EXIT_FAILURE);
- goto done;
- }
- ccred[0] = (const char *)s3_cred[0];
- ccred[1] = (const char *)s3_cred[1];
- ccred[2] = (const char *)s3_cred[2];
- if (0 == h5tools_populate_ros3_fapl(&ros3_fa, ccred)) {
- error_msg("Invalid S3 credentials\n");
- usage(h5tools_getprogname());
- free_handler(hand, argc);
- hand = NULL;
- h5tools_setstatus(EXIT_FAILURE);
- goto done;
- }
- HDfree(s3_cred);
- HDfree(s3_cred_string);
- } /* s3 credential block */
+#endif
break;
-#endif /* H5_HAVE_ROS3_VFD */
case '#':
-#ifndef H5_HAVE_LIBHDFS
- error_msg("HDFS VFD is not enabled.\n");
- goto error;
+#ifdef H5_HAVE_LIBHDFS
+ if (h5tools_parse_hdfs_fapl_tuple(opt_arg, ',', &hdfs_fa_g) < 0) {
+ error_msg("failed to parse HDFS VFD configuration info\n");
+ usage(h5tools_getprogname());
+ free_handler(hand, argc);
+ hand = NULL;
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
+ }
#else
- {
- /* read hdfs properties tuple and store values in `hdfs_fa` */
- unsigned nelems = 0;
- char *props_src = NULL;
- char **props = NULL;
- unsigned long k = 0;
- if (FAIL == parse_tuple((const char *)opt_arg, ',', &props_src, &nelems, &props)) {
- error_msg("unable to parse hdfs properties tuple\n");
- goto error;
- }
- /* sanity-check tuple count
- */
- if (nelems != 5) {
- h5tools_setstatus(EXIT_FAILURE);
- goto error;
- }
- /* Populate fapl configuration structure with given
- * properties.
- * WARNING: No error-checking is done on length of input
- * strings... Silent overflow is possible, albeit
- * unlikely.
- */
- if (strncmp(props[0], "", 1))
- HDstrncpy(hdfs_fa.namenode_name, (const char *)props[0], HDstrlen(props[0]));
+ error_msg("HDFS VFD not enabled.\n");
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
+#endif
+ break;
- if (strncmp(props[1], "", 1)) {
- k = strtoul((const char *)props[1], NULL, 0);
- if (errno == ERANGE) {
- h5tools_setstatus(EXIT_FAILURE);
- goto error;
- }
- hdfs_fa.namenode_port = (int32_t)k;
- }
- if (strncmp(props[2], "", 1))
- HDstrncpy(hdfs_fa.kerberos_ticket_cache, (const char *)props[2], HDstrlen(props[2]));
+ case '1':
+ vol_info_g.type = VOL_BY_VALUE;
+ vol_info_g.u.value = (H5VL_class_value_t)HDatoi(opt_arg);
+ use_custom_vol_g = TRUE;
+ break;
- if (strncmp(props[3], "", 1))
- HDstrncpy(hdfs_fa.user_name, (const char *)props[3], HDstrlen(props[3]));
+ case '2':
+ vol_info_g.type = VOL_BY_NAME;
+ vol_info_g.u.name = opt_arg;
+ use_custom_vol_g = TRUE;
+ break;
- if (strncmp(props[4], "", 1)) {
- k = strtoul((const char *)props[4], NULL, 0);
- if (errno == ERANGE) {
- h5tools_setstatus(EXIT_FAILURE);
- goto error;
- }
- hdfs_fa.stream_buffer_size = (int32_t)k;
- }
- HDfree(props);
- HDfree(props_src);
- }
-#endif /* H5_HAVE_LIBHDFS */
+ case '3':
+ vol_info_g.info_string = opt_arg;
break;
case '?':
@@ -1396,14 +1357,10 @@ main(int argc, const char *argv[])
hid_t fid = H5I_INVALID_HID;
hid_t gid = H5I_INVALID_HID;
hid_t fapl_id = H5P_DEFAULT;
- H5E_auto2_t func;
- H5E_auto2_t tools_func;
H5O_info2_t oi;
struct handler_t *hand = NULL;
int i;
unsigned u;
- void *edata;
- void *tools_edata;
char *fname = NULL;
h5tools_setprogname(PROGRAMNAME);
@@ -1412,63 +1369,50 @@ main(int argc, const char *argv[])
dump_function_table = &ddl_function_table;
dump_indent = 0;
- /* Disable error reporting */
- H5Eget_auto2(H5E_DEFAULT, &func, &edata);
- H5Eset_auto2(H5E_DEFAULT, NULL, NULL);
-
/* Initialize h5tools lib */
h5tools_init();
- /* Disable tools error reporting */
- H5Eget_auto2(H5tools_ERR_STACK_g, &tools_func, &tools_edata);
- H5Eset_auto2(H5tools_ERR_STACK_g, NULL, NULL);
-
if((hand = parse_command_line(argc, argv))==NULL) {
goto done;
}
- if (bin_output && outfname == NULL) {
+ if (bin_output && outfname_g == NULL) {
error_msg("binary output requires a file name, use -o <filename>\n");
h5tools_setstatus(EXIT_FAILURE);
goto done;
}
- if (enable_error_stack > 0) {
- H5Eset_auto2(H5E_DEFAULT, func, edata);
- H5Eset_auto2(H5tools_ERR_STACK_g, tools_func, tools_edata);
- }
-
/* Check for conflicting options */
- if (doxml) {
- if (!display_all) {
+ if (doxml_g) {
+ if (!dump_opts.display_all) {
error_msg("option \"%s\" not available for XML\n", "to display selected objects");
h5tools_setstatus(EXIT_FAILURE);
goto done;
}
- else if (display_bb) {
+ else if (dump_opts.display_bb) {
error_msg("option \"%s\" not available for XML\n", "--boot-block");
h5tools_setstatus(EXIT_FAILURE);
goto done;
}
- else if (display_oid == 1) {
+ else if (dump_opts.display_oid == 1) {
error_msg("option \"%s\" not available for XML\n", "--object-ids");
h5tools_setstatus(EXIT_FAILURE);
goto done;
}
- else if (display_char == TRUE) {
+ else if (dump_opts.display_char == TRUE) {
error_msg("option \"%s\" not available for XML\n", "--string");
h5tools_setstatus(EXIT_FAILURE);
goto done;
}
- else if (usingdasho) {
+ else if (dump_opts.usingdasho) {
error_msg("option \"%s\" not available for XML\n", "--output");
h5tools_setstatus(EXIT_FAILURE);
goto done;
}
}
else {
- if (xml_dtd_uri) {
- warn_msg("option \"%s\" only applies with XML: %s\n", "--xml-dtd", xml_dtd_uri);
+ if (xml_dtd_uri_g) {
+ warn_msg("option \"%s\" only applies with XML: %s\n", "--xml-dtd", xml_dtd_uri_g);
}
}
@@ -1478,57 +1422,58 @@ main(int argc, const char *argv[])
h5tools_setstatus(EXIT_FAILURE);
goto done;
}
+
+ /* enable error reporting if command line option */
+ h5tools_error_report();
+
/* Initialize indexing options */
h5trav_set_index(sort_by, sort_order);
- if (driver != NULL) {
- void *conf_fa = NULL;
+ if (driver_name_g != NULL) {
+ h5tools_vfd_info_t vfd_info;
- if (!strcmp(driver, "ros3")) {
-#ifndef H5_HAVE_ROS3_VFD
+ vfd_info.info = NULL;
+ vfd_info.name = driver_name_g;
+
+ if (!HDstrcmp(driver_name_g, drivernames[ROS3_VFD_IDX])) {
+#ifdef H5_HAVE_ROS3_VFD
+ vfd_info.info = (void *)&ros3_fa_g;
+#else
error_msg("Read-Only S3 VFD not enabled.\n");
h5tools_setstatus(EXIT_FAILURE);
goto done;
+#endif
+ }
+ else if (!HDstrcmp(driver_name_g, drivernames[HDFS_VFD_IDX])) {
+#ifdef H5_HAVE_LIBHDFS
+ vfd_info.info = (void *)&hdfs_fa_g;
#else
- conf_fa = (void *)&ros3_fa;
-#endif /* H5_HAVE_ROS3_VFD */
+ error_msg("The HDFS VFD is not enabled.\n");
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
+#endif
}
- else if (!HDstrcmp(driver, "hdfs")) {
-#ifndef H5_HAVE_LIBHDFS
- error_msg("HDFS VFD is not enabled.\n");
+
+ if ((fapl_id = h5tools_get_fapl(H5P_DEFAULT, NULL, &vfd_info)) < 0) {
+ error_msg("unable to create FAPL for file access\n");
h5tools_setstatus(EXIT_FAILURE);
goto done;
-#else
- conf_fa = (void *)&hdfs_fa;
-#endif /* H5_HAVE_LIBHDFS */
}
+ } /* driver name defined */
- if (conf_fa != NULL) {
- fapl_id = H5Pcreate(H5P_FILE_ACCESS);
- if (fapl_id < 0) {
- error_msg("unable to create fapl entry\n");
- h5tools_setstatus(EXIT_FAILURE);
- goto done;
- }
- /* driver guaranteed "ros3" or "hdfs" */
- /* conf_fa appropriate to driver */
- if (0 == h5tools_set_configured_fapl(fapl_id, driver, conf_fa)) {
- error_msg("unable to set fapl\n");
- h5tools_setstatus(EXIT_FAILURE);
- goto done;
- }
+ if (use_custom_vol_g) {
+ if ((fapl_id = h5tools_get_fapl(H5P_DEFAULT, &vol_info_g, NULL)) < 0) {
+ error_msg("unable to create FAPL for file access\n");
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
}
- } /* driver defined */
+ }
while(opt_ind < argc) {
fname = HDstrdup(argv[opt_ind++]);
- if (fapl_id != H5P_DEFAULT) {
- fid = H5Fopen(fname, H5F_ACC_RDONLY, fapl_id);
- }
- else {
- fid = h5tools_fopen(fname, H5F_ACC_RDONLY, H5P_DEFAULT, driver, NULL, 0);
- }
+ fid = h5tools_fopen(fname, H5F_ACC_RDONLY, fapl_id,
+ (fapl_id == H5P_DEFAULT) ? FALSE : TRUE, NULL, 0);
if (fid < 0) {
error_msg("unable to open file \"%s\"\n", fname);
@@ -1542,23 +1487,23 @@ main(int argc, const char *argv[])
/* Prepare to find objects that might be targets of a reference */
fill_ref_path_table(fid);
- if(doxml) {
+ if(doxml_g) {
/* initialize XML */
/* reset prefix! */
HDstrcpy(prefix, "");
/* make sure the URI is initialized to something */
- if (xml_dtd_uri == NULL) {
- if (useschema) {
- xml_dtd_uri = DEFAULT_XSD;
+ if (xml_dtd_uri_g == NULL) {
+ if (useschema_g) {
+ xml_dtd_uri_g = DEFAULT_XSD;
}
else {
- xml_dtd_uri = DEFAULT_DTD;
+ xml_dtd_uri_g = DEFAULT_DTD;
xmlnsprefix = "";
}
}
else {
- if (useschema && HDstrcmp(xmlnsprefix,"")) {
+ if (useschema_g && HDstrcmp(xmlnsprefix,"")) {
error_msg("Cannot set Schema URL for a qualified namespace--use -X or -U option with -D \n");
h5tools_setstatus(EXIT_FAILURE);
goto done;
@@ -1591,16 +1536,16 @@ main(int argc, const char *argv[])
} /* end if */
/* start to dump - display file header information */
- if (!doxml) {
+ if (!doxml_g) {
begin_obj(h5tools_dump_header_format->filebegin, fname, h5tools_dump_header_format->fileblockbegin);
}
else {
PRINTVALSTREAM(rawoutstream, "<?xml version=\"1.0\" encoding=\"UTF-8\"?>\n");
/* alternative first element, depending on schema or DTD. */
- if (useschema) {
+ if (useschema_g) {
if (HDstrcmp(xmlnsprefix,"") == 0) {
- PRINTSTREAM(rawoutstream, "<HDF5-File xmlns:xsi=\"http://www.w3.org/2001/XMLSchema-instance\" xsi:noNamespaceSchemaLocation=\"%s\">\n", xml_dtd_uri);
+ PRINTSTREAM(rawoutstream, "<HDF5-File xmlns:xsi=\"http://www.w3.org/2001/XMLSchema-instance\" xsi:noNamespaceSchemaLocation=\"%s\">\n", xml_dtd_uri_g);
}
else {
/* TO DO: make -url option work in this case (may need new option) */
@@ -1620,13 +1565,13 @@ main(int argc, const char *argv[])
}
}
else {
- PRINTSTREAM(rawoutstream, "<!DOCTYPE HDF5-File PUBLIC \"HDF5-File.dtd\" \"%s\">\n", xml_dtd_uri);
+ PRINTSTREAM(rawoutstream, "<!DOCTYPE HDF5-File PUBLIC \"HDF5-File.dtd\" \"%s\">\n", xml_dtd_uri_g);
PRINTVALSTREAM(rawoutstream, "<HDF5-File>\n");
}
}
- if (!doxml) {
- if (display_fi) {
+ if (!doxml_g) {
+ if (dump_opts.display_fi) {
PRINTVALSTREAM(rawoutstream, "\n");
dump_fcontents(fid);
end_obj(h5tools_dump_header_format->fileend,h5tools_dump_header_format->fileblockend);
@@ -1634,20 +1579,20 @@ main(int argc, const char *argv[])
goto done;
}
- if (display_bb)
+ if (dump_opts.display_bb)
dump_fcpl(fid);
}
- if(display_all) {
+ if(dump_opts.display_all) {
if((gid = H5Gopen2(fid, "/", H5P_DEFAULT)) < 0) {
error_msg("unable to open root group\n");
h5tools_setstatus(EXIT_FAILURE);
}
else {
- if (!doxml)
+ if (!doxml_g)
dump_indent += COL;
dump_function_table->dump_group_function(gid, "/" );
- if (!doxml)
+ if (!doxml_g)
dump_indent -= COL;
PRINTVALSTREAM(rawoutstream, "\n");
}
@@ -1660,7 +1605,7 @@ main(int argc, const char *argv[])
}
else {
/* Note: this option is not supported for XML */
- if(doxml) {
+ if(doxml_g) {
error_msg("internal error (file %s:line %d)\n", __FILE__, __LINE__);
h5tools_setstatus(EXIT_FAILURE);
goto done;
@@ -1674,7 +1619,7 @@ main(int argc, const char *argv[])
PRINTVALSTREAM(rawoutstream, "\n");
}
- if (!doxml) {
+ if (!doxml_g) {
end_obj(h5tools_dump_header_format->fileend, h5tools_dump_header_format->fileblockend);
PRINTVALSTREAM(rawoutstream, "\n");
}
@@ -1703,8 +1648,6 @@ main(int argc, const char *argv[])
/* To Do: clean up XML table */
- H5Eset_auto2(H5E_DEFAULT, func, edata);
-
leave(h5tools_getstatus());
done:
@@ -1734,8 +1677,6 @@ done:
/* To Do: clean up XML table */
- H5Eset_auto2(H5E_DEFAULT, func, edata);
-
leave(h5tools_getstatus());
} /* main */
diff --git a/tools/src/h5dump/h5dump.h b/tools/src/h5dump/h5dump.h
index ca1fef6..548af09 100644
--- a/tools/src/h5dump/h5dump.h
+++ b/tools/src/h5dump/h5dump.h
@@ -52,8 +52,8 @@ typedef struct h5dump_table_list_t {
h5dump_table_list_t table_list = {0, 0, NULL};
table_t *group_table = NULL, *dset_table = NULL, *type_table = NULL;
-unsigned dump_indent = 0; /*how far in to indent the line */
+unsigned dump_indent = 0; /* how far in to indent the line */
int unamedtype = 0; /* shared datatype with no name */
hbool_t hit_elink = FALSE; /* whether we have traversed an external link */
size_t prefix_len = 1024;
@@ -61,23 +61,26 @@ char *prefix = NULL;
const char *fp_format = NULL;
/* things to display or which are set via command line parameters */
-int display_all = TRUE;
-int display_oid = FALSE;
-int display_data = TRUE;
-int display_attr_data = TRUE;
-int display_char = FALSE; /*print 1-byte numbers as ASCII */
-int usingdasho = FALSE;
-int display_bb = FALSE; /*superblock */
-int display_dcpl = FALSE; /*dcpl */
-int display_fi = FALSE; /*file index */
-int display_ai = TRUE; /*array index */
-int display_escape = FALSE; /*escape non printable characters */
-int display_region = FALSE; /*print region reference data */
-int disable_compact_subset= FALSE; /* disable compact form of subset notation */
-int display_packed_bits = FALSE; /*print 1-8 byte numbers as packed bits*/
-int include_attrs = TRUE; /* Display attributes */
-int display_vds_first = FALSE; /* vds display to all by default*/
-int vds_gap_size = 0; /* vds skip missing files default is none */
+typedef struct {
+ int display_all;
+ int display_oid;
+ int display_data;
+ int display_attr_data;
+ int display_char; /* print 1-byte numbers as ASCII */
+ int usingdasho;
+ int display_bb; /* superblock */
+ int display_dcpl; /* dcpl */
+ int display_fi; /* file index */
+ int display_ai; /* array index */
+ int display_escape; /* escape non printable characters */
+ int display_region; /* print region reference data */
+ int disable_compact_subset; /* disable compact form of subset notation */
+ int display_packed_bits; /* print 1-8 byte numbers as packed bits */
+ int include_attrs; /* Display attributes */
+ int display_vds_first; /* vds display to all by default */
+ int vds_gap_size; /* vds skip missing files default is none */
+} dump_opt_t;
+dump_opt_t dump_opts = {TRUE, FALSE, TRUE, TRUE, FALSE, FALSE, FALSE, FALSE, FALSE, TRUE, FALSE, FALSE, FALSE, FALSE, TRUE, FALSE, 0};
#define PACKED_BITS_MAX 8 /* Maximum number of packed-bits to display */
#define PACKED_BITS_SIZE_MAX (8*sizeof(long long)) /* Maximum bits size of integer types of packed-bits */
diff --git a/tools/src/h5dump/h5dump_ddl.c b/tools/src/h5dump/h5dump_ddl.c
index a410fda..b50ce52 100644
--- a/tools/src/h5dump/h5dump_ddl.c
+++ b/tools/src/h5dump/h5dump_ddl.c
@@ -103,13 +103,13 @@ dump_attr_cb(hid_t oid, const char *attr_name, const H5A_info_t H5_ATTR_UNUSED *
HDmemset(&ctx, 0, sizeof(ctx));
ctx.indent_level = dump_indent / COL;
ctx.cur_column = dump_indent;
- ctx.display_index = display_ai;
- ctx.display_char = display_char;
+ ctx.display_index = dump_opts.display_ai;
+ ctx.display_char = dump_opts.display_char;
attr_id = H5Aopen(oid, attr_name, H5P_DEFAULT);
- oid_output = display_oid;
- data_output = display_data;
- attr_data_output = display_attr_data;
+ oid_output = dump_opts.display_oid;
+ data_output = dump_opts.display_data;
+ attr_data_output = dump_opts.display_attr_data;
string_dataformat = *outputformat;
@@ -125,7 +125,7 @@ dump_attr_cb(hid_t oid, const char *attr_name, const H5A_info_t H5_ATTR_UNUSED *
else
string_dataformat.line_ncols = h5tools_nCols;
- string_dataformat.do_escape = display_escape;
+ string_dataformat.do_escape = dump_opts.display_escape;
outputformat = &string_dataformat;
h5dump_type_table = type_table;
@@ -185,7 +185,7 @@ dump_all_cb(hid_t group, const char *name, const H5L_info2_t *linfo, void H5_ATT
else
string_dataformat.line_ncols = h5tools_nCols;
- string_dataformat.do_escape = display_escape;
+ string_dataformat.do_escape = dump_opts.display_escape;
outputformat = &string_dataformat;
/* Build the object's path name */
@@ -242,16 +242,16 @@ dump_all_cb(hid_t group, const char *name, const H5L_info2_t *linfo, void H5_ATT
break;
case H5O_TYPE_DATASET:
- if(display_data) {
+ if(dump_opts.display_data) {
if ((dapl_id = H5Pcreate(H5P_DATASET_ACCESS)) < 0) {
error_msg("error in creating default access property list ID\n");
}
- if (display_vds_first) {
+ if (dump_opts.display_vds_first) {
if(H5Pset_virtual_view(dapl_id, H5D_VDS_FIRST_MISSING) < 0)
error_msg("error in setting access property list ID, virtual_view\n");
}
- if (vds_gap_size > 0) {
- if(H5Pset_virtual_printf_gap(dapl_id, (hsize_t)vds_gap_size) < 0)
+ if (dump_opts.vds_gap_size > 0) {
+ if(H5Pset_virtual_printf_gap(dapl_id, (hsize_t)dump_opts.vds_gap_size) < 0)
error_msg("error in setting access property list ID, virtual_printf_gap\n");
}
}
@@ -565,7 +565,7 @@ attr_iteration(hid_t gid, unsigned attr_crt_order_flags)
{
/* attribute iteration: if there is a request to do H5_INDEX_CRT_ORDER and tracking order is set
in the group for attributes, then, sort by creation order, otherwise by name */
- if(include_attrs) {
+ if(dump_opts.include_attrs) {
if((sort_by == H5_INDEX_CRT_ORDER) && (attr_crt_order_flags & H5P_CRT_ORDER_TRACKED)) {
if(H5Aiterate2(gid, sort_by, sort_order, NULL, dump_attr_cb, NULL) < 0) {
error_msg("error getting attribute information\n");
@@ -642,7 +642,7 @@ dump_named_datatype(hid_t tid, const char *name)
else
string_dataformat.line_ncols = h5tools_nCols;
- string_dataformat.do_escape = display_escape;
+ string_dataformat.do_escape = dump_opts.display_escape;
outputformat = &string_dataformat;
if ((tcpl_id = H5Tget_create_plist(tid)) < 0) {
@@ -795,7 +795,7 @@ dump_group(hid_t gid, const char *name)
else
string_dataformat.line_ncols = h5tools_nCols;
- string_dataformat.do_escape = display_escape;
+ string_dataformat.do_escape = dump_opts.display_escape;
outputformat = &string_dataformat;
ctx.need_prefix = TRUE;
@@ -816,14 +816,14 @@ dump_group(hid_t gid, const char *name)
/* dump unamed type in root group */
for(u = 0; u < type_table->nobjs; u++)
if(!type_table->objs[u].recorded) {
- char *obj_addr_str = NULL;
+ char *obj_tok_str = NULL;
dset = H5Dopen2(gid, type_table->objs[u].objname, H5P_DEFAULT);
type = H5Dget_type(dset);
- H5Otoken_to_str(dset, &type_table->objs[u].obj_token, &obj_addr_str);
- HDsprintf(type_name, "#%s", obj_addr_str);
- H5free_memory(obj_addr_str);
+ H5Otoken_to_str(dset, &type_table->objs[u].obj_token, &obj_tok_str);
+ HDsprintf(type_name, "#%s", obj_tok_str);
+ H5free_memory(obj_tok_str);
dump_function_table->dump_named_datatype_function(type, type_name);
H5Tclose(type);
@@ -831,7 +831,7 @@ dump_group(hid_t gid, const char *name)
}
} /* end if */
- if(display_oid)
+ if(dump_opts.display_oid)
h5tools_dump_oid(rawoutstream, outputformat, &ctx, gid);
h5tools_dump_comment(rawoutstream, outputformat, &ctx, gid);
@@ -926,7 +926,7 @@ dump_dataset(hid_t did, const char *name, struct subset_t *sset)
else
string_dataformat.line_ncols = h5tools_nCols;
- string_dataformat.do_escape = display_escape;
+ string_dataformat.do_escape = dump_opts.display_escape;
outputformat = &string_dataformat;
if ((dcpl_id = H5Dget_create_plist(did)) < 0) {
@@ -967,11 +967,11 @@ dump_dataset(hid_t did, const char *name, struct subset_t *sset)
h5tools_dump_dataspace(rawoutstream, outputformat, &ctx, space);
H5Sclose(space);
- if(display_oid) {
+ if(dump_opts.display_oid) {
h5tools_dump_oid(rawoutstream, outputformat, &ctx, did);
}
- if(display_dcpl) {
+ if(dump_opts.display_dcpl) {
h5dump_type_table = type_table;
h5tools_dump_dcpl(rawoutstream, outputformat, &ctx, dcpl_id, type, did);
h5dump_type_table = NULL;
@@ -979,16 +979,16 @@ dump_dataset(hid_t did, const char *name, struct subset_t *sset)
H5Pclose(dcpl_id);
ctx.sset = sset;
- ctx.display_index = display_ai;
- ctx.display_char = display_char;
- if(display_data) {
+ ctx.display_index = dump_opts.display_ai;
+ ctx.display_char = dump_opts.display_char;
+ if(dump_opts.display_data) {
unsigned data_loop = 1;
unsigned u;
- if(display_packed_bits)
+ if(dump_opts.display_packed_bits)
data_loop = packed_bits_num;
for(u = 0; u < data_loop; u++) {
- if(display_packed_bits) {
+ if(dump_opts.display_packed_bits) {
ctx.need_prefix = TRUE;
h5tools_simple_prefix(rawoutstream, outputformat, &ctx, (hsize_t)0, 0);
/* Render the element */
@@ -1091,7 +1091,7 @@ dump_data(hid_t obj_id, int obj_data, struct subset_t *sset, int display_index)
else
string_dataformat.line_ncols = h5tools_nCols;
- string_dataformat.do_escape = display_escape;
+ string_dataformat.do_escape = dump_opts.display_escape;
outputformat = &string_dataformat;
HDmemset(&ctx, 0, sizeof(ctx));
@@ -1099,7 +1099,7 @@ dump_data(hid_t obj_id, int obj_data, struct subset_t *sset, int display_index)
ctx.cur_column = dump_indent;
ctx.sset = sset;
ctx.display_index = display_index;
- ctx.display_char = display_char;
+ ctx.display_char = dump_opts.display_char;
if(obj_data == DATASET_DATA)
print_dataset = TRUE;
@@ -1136,6 +1136,18 @@ dump_fcpl(hid_t fid)
unsigned sym_ik; /* symbol table B-tree internal 'K' value */
unsigned istore_ik; /* indexed storage B-tree internal 'K' value */
+ hbool_t supported = FALSE;
+
+ /* Dumping the information here only makes sense for the native
+ * VOL connector. The only VOL call here is H5Fget_info(), so we'll
+ * use that as a proxy for "native-ness". If that isn't supported, we'll
+ * just return.
+ */
+ H5VLquery_optional(fid, H5VL_SUBCLS_FILE, H5VL_NATIVE_FILE_GET_INFO, &supported);
+
+ if (!supported)
+ return;
+
fcpl=H5Fget_create_plist(fid);
H5Fget_info2(fid, &finfo);
H5Pget_userblock(fcpl,&userblock);
@@ -1258,11 +1270,11 @@ dump_fcontents(hid_t fid)
for (u = 0; u < type_table->nobjs; u++) {
if (!type_table->objs[u].recorded) {
- char *obj_addr_str = NULL;
+ char *obj_tok_str = NULL;
- H5Otoken_to_str(fid, &type_table->objs[u].obj_token, &obj_addr_str);
- PRINTSTREAM(rawoutstream, " %-10s /#%s\n", "datatype", obj_addr_str);
- H5free_memory(obj_addr_str);
+ H5Otoken_to_str(fid, &type_table->objs[u].obj_token, &obj_tok_str);
+ PRINTSTREAM(rawoutstream, " %-10s /#%s\n", "datatype", obj_tok_str);
+ H5free_memory(obj_tok_str);
}
}
}
@@ -1515,8 +1527,8 @@ handle_attributes(hid_t fid, const char *attr, void H5_ATTR_UNUSED *data, int H5
HDmemset(&ctx, 0, sizeof(ctx));
ctx.indent_level = dump_indent / COL;
ctx.cur_column = dump_indent;
- ctx.display_index = display_ai;
- ctx.display_char = display_char;
+ ctx.display_index = dump_opts.display_ai;
+ ctx.display_char = dump_opts.display_char;
string_dataformat = *outputformat;
@@ -1532,7 +1544,7 @@ handle_attributes(hid_t fid, const char *attr, void H5_ATTR_UNUSED *data, int H5
else
string_dataformat.line_ncols = h5tools_nCols;
- string_dataformat.do_escape = display_escape;
+ string_dataformat.do_escape = dump_opts.display_escape;
outputformat = &string_dataformat;
attr_name = h5tools_str_replace(attr + j + 1, "\\/", "/");
@@ -1571,9 +1583,9 @@ handle_attributes(hid_t fid, const char *attr, void H5_ATTR_UNUSED *data, int H5
} /* end if */
attr_id = H5Aopen(oid, attr_name, H5P_DEFAULT);
- oid_output = display_oid;
- data_output = display_data;
- attr_data_output = display_attr_data;
+ oid_output = dump_opts.display_oid;
+ data_output = dump_opts.display_data;
+ attr_data_output = dump_opts.display_attr_data;
h5dump_type_table = type_table;
h5tools_dump_attribute(rawoutstream, outputformat, &ctx, attr_name, attr_id);
@@ -1625,16 +1637,16 @@ handle_datasets(hid_t fid, const char *dset, void *data, int pe, const char *dis
struct subset_t *sset = (struct subset_t *)data;
const char *real_name = display_name ? display_name : dset;
- if(display_data) {
+ if(dump_opts.display_data) {
if ((dapl_id = H5Pcreate(H5P_DATASET_ACCESS)) < 0) {
error_msg("error in creating default access property list ID\n");
}
- if (display_vds_first) {
+ if (dump_opts.display_vds_first) {
if(H5Pset_virtual_view(dapl_id, H5D_VDS_FIRST_MISSING) < 0)
error_msg("error in setting access property list ID, virtual_view\n");
}
- if (vds_gap_size > 0) {
- if(H5Pset_virtual_printf_gap(dapl_id, (hsize_t)vds_gap_size) < 0)
+ if (dump_opts.vds_gap_size > 0) {
+ if(H5Pset_virtual_printf_gap(dapl_id, (hsize_t)dump_opts.vds_gap_size) < 0)
error_msg("error in setting access property list ID, virtual_printf_gap\n");
}
}
@@ -1914,12 +1926,12 @@ handle_datatypes(hid_t fid, const char *type, void H5_ATTR_UNUSED * data, int pe
char name[128];
if(!type_table->objs[idx].recorded) {
- char *obj_addr_string = NULL;
+ char *obj_tok_str = NULL;
/* unamed datatype */
- H5Otoken_to_str(fid, &type_table->objs[idx].obj_token, &obj_addr_string);
- HDsprintf(name, "/#%s", obj_addr_string);
- H5free_memory(obj_addr_string);
+ H5Otoken_to_str(fid, &type_table->objs[idx].obj_token, &obj_tok_str);
+ HDsprintf(name, "/#%s", obj_tok_str);
+ H5free_memory(obj_tok_str);
if(!HDstrcmp(name, real_name))
break;
diff --git a/tools/src/h5dump/h5dump_extern.h b/tools/src/h5dump/h5dump_extern.h
index 00d3bd2..c615621 100644
--- a/tools/src/h5dump/h5dump_extern.h
+++ b/tools/src/h5dump/h5dump_extern.h
@@ -50,32 +50,35 @@ typedef struct h5dump_table_list_t {
extern h5dump_table_list_t table_list;
extern table_t *group_table, *dset_table, *type_table;
-extern unsigned dump_indent; /*how far in to indent the line */
-extern int unamedtype; /* shared datatype with no name */
-extern hbool_t hit_elink; /* whether we have traversed an external link */
+extern unsigned dump_indent; /* how far in to indent the line */
+extern int unamedtype; /* shared datatype with no name */
+extern hbool_t hit_elink; /* whether we have traversed an external link */
extern size_t prefix_len;
extern char *prefix;
extern const char *fp_format;
/* things to display or which are set via command line parameters */
-extern int display_all;
-extern int display_oid;
-extern int display_data;
-extern int display_attr_data;
-extern int display_char; /*print 1-byte numbers as ASCII */
-extern int usingdasho;
-extern int display_bb; /*superblock */
-extern int display_dcpl; /*dcpl */
-extern int display_fi; /*file index */
-extern int display_ai; /*array index */
-extern int display_escape; /*escape non printable characters */
-extern int display_region; /*print region reference data */
-extern int disable_compact_subset; /* disable compact form of subset notation */
-extern int display_packed_bits; /*print 1-8 byte numbers as packed bits*/
-extern int include_attrs; /* Display attributes */
-extern int display_vds_first; /* vds display to first missing */
-extern int vds_gap_size; /* vds skip missing files */
+typedef struct {
+ int display_all;
+ int display_oid;
+ int display_data;
+ int display_attr_data;
+ int display_char; /* print 1-byte numbers as ASCII */
+ int usingdasho;
+ int display_bb; /* superblock */
+ int display_dcpl; /* dcpl */
+ int display_fi; /* file index */
+ int display_ai; /* array index */
+ int display_escape; /* escape non printable characters */
+ int display_region; /* print region reference data */
+ int disable_compact_subset; /* disable compact form of subset notation */
+ int display_packed_bits; /* print 1-8 byte numbers as packed bits */
+ int include_attrs; /* Display attributes */
+ int display_vds_first; /* vds display to all by default */
+ int vds_gap_size; /* vds skip missing files default is none */
+} dump_opt_t;
+extern dump_opt_t dump_opts;
#define PACKED_BITS_MAX 8 /* Maximum number of packed-bits to display */
#define PACKED_BITS_SIZE_MAX 8*sizeof(long long) /* Maximum bits size of integer types of packed-bits */
diff --git a/tools/src/h5dump/h5dump_xml.c b/tools/src/h5dump/h5dump_xml.c
index 1a7c3ce..bb47f77 100644
--- a/tools/src/h5dump/h5dump_xml.c
+++ b/tools/src/h5dump/h5dump_xml.c
@@ -162,7 +162,7 @@ xml_dump_all_cb(hid_t group, const char *name, const H5L_info2_t *linfo, void H5
else
string_dataformat.line_ncols = h5tools_nCols;
- string_dataformat.do_escape = display_escape;
+ string_dataformat.do_escape = dump_opts.display_escape;
outputformat = &string_dataformat;
/* Build the object's path name */
@@ -578,7 +578,7 @@ int
xml_name_to_XID(hid_t loc_id, const char *str, char *outstr, int outlen, int gen)
{
H5O_token_t obj_token;
- char *obj_addr_str = NULL;
+ char *obj_tok_str = NULL;
int lookup_ret;
if (outlen < 22) return 1;
@@ -591,9 +591,9 @@ xml_name_to_XID(hid_t loc_id, const char *str, char *outstr, int outlen, int gen
if (gen) {
ref_path_table_gen_fake(str, &obj_token);
- H5Otoken_to_str(loc_id, &obj_token, &obj_addr_str);
- HDsprintf(outstr, "xid_%s", obj_addr_str);
- H5free_memory(obj_addr_str);
+ H5Otoken_to_str(loc_id, &obj_token, &obj_tok_str);
+ HDsprintf(outstr, "xid_%s", obj_tok_str);
+ H5free_memory(obj_tok_str);
return 0;
}
@@ -606,9 +606,9 @@ xml_name_to_XID(hid_t loc_id, const char *str, char *outstr, int outlen, int gen
if (gen) {
ref_path_table_gen_fake(str, &obj_token);
- H5Otoken_to_str(loc_id, &obj_token, &obj_addr_str);
- HDsprintf(outstr, "xid_%s", obj_addr_str);
- H5free_memory(obj_addr_str);
+ H5Otoken_to_str(loc_id, &obj_token, &obj_tok_str);
+ HDsprintf(outstr, "xid_%s", obj_tok_str);
+ H5free_memory(obj_tok_str);
return 0;
}
@@ -618,9 +618,9 @@ xml_name_to_XID(hid_t loc_id, const char *str, char *outstr, int outlen, int gen
}
}
- H5Otoken_to_str(loc_id, &obj_token, &obj_addr_str);
- HDsprintf(outstr, "xid_%s", obj_addr_str);
- H5free_memory(obj_addr_str);
+ H5Otoken_to_str(loc_id, &obj_token, &obj_tok_str);
+ HDsprintf(outstr, "xid_%s", obj_tok_str);
+ H5free_memory(obj_tok_str);
return 0;
}
@@ -738,9 +738,9 @@ xml_escape_the_string(const char *str, int slen)
size_t extra;
size_t len;
size_t i;
- const char *cp;
- char *ncp;
- char *rcp;
+ const char *cp = NULL;
+ char *ncp = NULL;
+ char *rcp = NULL;
size_t ncp_len;
if (!str)
@@ -783,29 +783,31 @@ xml_escape_the_string(const char *str, int slen)
if (*cp == '\\') {
*ncp++ = '\\';
+ ncp_len--;
*ncp = *cp;
esc_len = 1;
}
else if (*cp == '\"') {
*ncp++ = '\\';
+ ncp_len--;
*ncp = *cp;
esc_len = 1;
}
else if (*cp == '\'') {
+ HDstrncpy(ncp, apos, ncp_len);
esc_len = HDstrlen(apos);
- HDstrncpy(ncp, apos, esc_len);
}
else if (*cp == '<') {
+ HDstrncpy(ncp, lt, ncp_len);
esc_len = HDstrlen(lt);
- HDstrncpy(ncp, lt, esc_len);
}
else if (*cp == '>') {
+ HDstrncpy(ncp, gt, ncp_len);
esc_len = HDstrlen(gt);
- HDstrncpy(ncp, gt, esc_len);
}
else if (*cp == '&') {
+ HDstrncpy(ncp, amp, ncp_len);
esc_len = HDstrlen(amp);
- HDstrncpy(ncp, amp, esc_len);
}
else {
*ncp = *cp;
@@ -886,7 +888,7 @@ xml_print_datatype(hid_t type, unsigned in_group)
else
string_dataformat.line_ncols = h5tools_nCols;
- string_dataformat.do_escape = display_escape;
+ string_dataformat.do_escape = dump_opts.display_escape;
outputformat = &string_dataformat;
if(!in_group && H5Tcommitted(type) > 0) {
@@ -1536,7 +1538,7 @@ xml_dump_datatype(hid_t type)
else
string_dataformat.line_ncols = h5tools_nCols;
- string_dataformat.do_escape = display_escape;
+ string_dataformat.do_escape = dump_opts.display_escape;
outputformat = &string_dataformat;
ctx.indent_level++;
@@ -1667,7 +1669,7 @@ xml_dump_dataspace(hid_t space)
else
string_dataformat.line_ncols = h5tools_nCols;
- string_dataformat.do_escape = display_escape;
+ string_dataformat.do_escape = dump_opts.display_escape;
outputformat = &string_dataformat;
ctx.indent_level++;
@@ -1990,7 +1992,7 @@ xml_dump_attr(hid_t attr, const char *attr_name, const H5A_info_t H5_ATTR_UNUSED
else
string_dataformat.line_ncols = h5tools_nCols;
- string_dataformat.do_escape = display_escape;
+ string_dataformat.do_escape = dump_opts.display_escape;
outputformat = &string_dataformat;
ctx.need_prefix = TRUE;
@@ -2012,7 +2014,7 @@ xml_dump_attr(hid_t attr, const char *attr_name, const H5A_info_t H5_ATTR_UNUSED
ctx.indent_level++;
dump_indent += COL;
- if (display_attr_data && space_type != H5S_NULL) {
+ if (dump_opts.display_attr_data && space_type != H5S_NULL) {
switch (H5Tget_class(type)) {
case H5T_INTEGER:
case H5T_FLOAT:
@@ -2291,7 +2293,7 @@ xml_dump_named_datatype(hid_t type, const char *name)
else
string_dataformat.line_ncols = h5tools_nCols;
- string_dataformat.do_escape = display_escape;
+ string_dataformat.do_escape = dump_opts.display_escape;
outputformat = &string_dataformat;
dtxid = (char *)HDmalloc((size_t)100);
@@ -2504,7 +2506,7 @@ xml_dump_group(hid_t gid, const char *name)
else
string_dataformat.line_ncols = h5tools_nCols;
- string_dataformat.do_escape = display_escape;
+ string_dataformat.do_escape = dump_opts.display_escape;
outputformat = &string_dataformat;
if(HDstrcmp(name, "/") == 0) {
@@ -2659,14 +2661,14 @@ xml_dump_group(hid_t gid, const char *name)
/* Very special case: dump unamed type in root group */
for(u = 0; u < type_table->nobjs; u++) {
if(!type_table->objs[u].recorded) {
- char *obj_addr_str = NULL;
+ char *obj_tok_str = NULL;
dset = H5Dopen2(gid, type_table->objs[u].objname, H5P_DEFAULT);
type = H5Dget_type(dset);
- H5Otoken_to_str(dset, &type_table->objs[u].obj_token, &obj_addr_str);
- HDsprintf(type_name, "#%s", obj_addr_str);
- H5free_memory(obj_addr_str);
+ H5Otoken_to_str(dset, &type_table->objs[u].obj_token, &obj_tok_str);
+ HDsprintf(type_name, "#%s", obj_tok_str);
+ H5free_memory(obj_tok_str);
dump_function_table->dump_named_datatype_function(type, type_name);
H5Tclose(type);
@@ -2747,14 +2749,14 @@ xml_dump_group(hid_t gid, const char *name)
/* Very special case: dump unamed type in root group */
for(u = 0; u < type_table->nobjs; u++) {
if(!type_table->objs[u].recorded) {
- char *obj_addr_str = NULL;
+ char *obj_tok_str = NULL;
dset = H5Dopen2(gid, type_table->objs[u].objname, H5P_DEFAULT);
type = H5Dget_type(dset);
- H5Otoken_to_str(dset, &type_table->objs[u].obj_token, &obj_addr_str);
- HDsprintf(type_name, "#%s", obj_addr_str);
- H5free_memory(obj_addr_str);
+ H5Otoken_to_str(dset, &type_table->objs[u].obj_token, &obj_tok_str);
+ HDsprintf(type_name, "#%s", obj_tok_str);
+ H5free_memory(obj_tok_str);
dump_function_table->dump_named_datatype_function(type, type_name);
H5Tclose(type);
@@ -2887,7 +2889,7 @@ xml_print_refs(hid_t did, int source)
else
string_dataformat.line_ncols = h5tools_nCols;
- string_dataformat.do_escape = display_escape;
+ string_dataformat.do_escape = dump_opts.display_escape;
outputformat = &string_dataformat;
for (i = 0; i < (hsize_t)ssiz; i++) {
@@ -3037,7 +3039,7 @@ xml_print_strs(hid_t did, int source)
else
string_dataformat.line_ncols = h5tools_nCols;
- string_dataformat.do_escape = display_escape;
+ string_dataformat.do_escape = dump_opts.display_escape;
outputformat = &string_dataformat;
for (i = 0; i < (hsize_t)ssiz; i++) {
@@ -3149,7 +3151,7 @@ check_filters(hid_t dcpl)
else
string_dataformat.line_ncols = h5tools_nCols;
- string_dataformat.do_escape = display_escape;
+ string_dataformat.do_escape = dump_opts.display_escape;
outputformat = &string_dataformat;
nfilt = H5Pget_nfilters(dcpl);
@@ -3285,7 +3287,7 @@ xml_dump_fill_value(hid_t dcpl, hid_t type)
else
string_dataformat.line_ncols = h5tools_nCols;
- string_dataformat.do_escape = display_escape;
+ string_dataformat.do_escape = dump_opts.display_escape;
outputformat = &string_dataformat;
ctx.indent_level++;
@@ -3625,7 +3627,7 @@ xml_dump_dataset(hid_t did, const char *name, struct subset_t H5_ATTR_UNUSED *ss
else
string_dataformat.line_ncols = h5tools_nCols;
- string_dataformat.do_escape = display_escape;
+ string_dataformat.do_escape = dump_opts.display_escape;
outputformat = &string_dataformat;
xml_name_to_XID(did, tmp, rstr, 100, 1);
@@ -3914,7 +3916,7 @@ xml_dump_dataset(hid_t did, const char *name, struct subset_t H5_ATTR_UNUSED *ss
dump_indent -= COL;
tempi = H5Dget_storage_size(did);
- if (display_data && (tempi > 0)) {
+ if (dump_opts.display_data && (tempi > 0)) {
switch (H5Tget_class(type)) {
case H5T_INTEGER:
case H5T_FLOAT:
@@ -4170,7 +4172,7 @@ xml_print_enum(hid_t type)
else
string_dataformat.line_ncols = h5tools_nCols;
- string_dataformat.do_escape = display_escape;
+ string_dataformat.do_escape = dump_opts.display_escape;
outputformat = &string_dataformat;
nmembs = (unsigned)H5Tget_nmembers(type);