diff options
author | Allen Byrne <byrn@hdfgroup.org> | 2016-10-27 15:06:00 (GMT) |
---|---|---|
committer | Allen Byrne <byrn@hdfgroup.org> | 2016-10-27 15:06:00 (GMT) |
commit | 2c6dbbf2129c4997606be4b130346d42fe12eae3 (patch) | |
tree | db8430aa5757b32f3bd46928798cc2b686a72bfb /tools/src/h5import | |
parent | 5b562d9ce9b2945d0378b9c03e01f42923da80f4 (diff) | |
download | hdf5-2c6dbbf2129c4997606be4b130346d42fe12eae3.zip hdf5-2c6dbbf2129c4997606be4b130346d42fe12eae3.tar.gz hdf5-2c6dbbf2129c4997606be4b130346d42fe12eae3.tar.bz2 |
Split tools into src and test - add folders
Diffstat (limited to 'tools/src/h5import')
-rw-r--r-- | tools/src/h5import/CMakeLists.txt | 40 | ||||
-rw-r--r-- | tools/src/h5import/Makefile.am | 35 | ||||
-rw-r--r-- | tools/src/h5import/h5import.c | 4393 | ||||
-rw-r--r-- | tools/src/h5import/h5import.h | 198 |
4 files changed, 4666 insertions, 0 deletions
diff --git a/tools/src/h5import/CMakeLists.txt b/tools/src/h5import/CMakeLists.txt new file mode 100644 index 0000000..97ab4ec --- /dev/null +++ b/tools/src/h5import/CMakeLists.txt @@ -0,0 +1,40 @@ +cmake_minimum_required (VERSION 3.1.0) +PROJECT (HDF5_TOOLS_SRC_H5IMPORT) + +#----------------------------------------------------------------------------- +# Setup include Directories +#----------------------------------------------------------------------------- +INCLUDE_DIRECTORIES (${HDF5_TOOLS_DIR}/lib) + +# -------------------------------------------------------------------- +# Add the h5import executables +# -------------------------------------------------------------------- +add_executable (h5import ${HDF5_TOOLS_SRC_H5IMPORT_SOURCE_DIR}/h5import.c) +TARGET_NAMING (h5import STATIC) +TARGET_C_PROPERTIES (h5import STATIC " " " ") +target_link_libraries (h5import ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) +#set_target_properties (h5import PROPERTIES COMPILE_DEFINITIONS H5DEBUGIMPORT) +set_target_properties (h5import PROPERTIES FOLDER tools) +set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5import") + +set (H5_DEP_EXECUTABLES h5import) + +############################################################################## +############################################################################## +### I N S T A L L A T I O N ### +############################################################################## +############################################################################## + +#----------------------------------------------------------------------------- +# Rules for Installation of tools using make Install target +#----------------------------------------------------------------------------- + +#INSTALL_PROGRAM_PDB (h5import ${HDF5_INSTALL_BIN_DIR} toolsapplications) + +install ( + TARGETS + h5import + EXPORT + ${HDF5_EXPORTED_TARGETS} + RUNTIME DESTINATION ${HDF5_INSTALL_BIN_DIR} COMPONENT toolsapplications +) diff --git a/tools/src/h5import/Makefile.am b/tools/src/h5import/Makefile.am new file mode 100644 index 0000000..2eae9ec --- /dev/null +++ b/tools/src/h5import/Makefile.am @@ -0,0 +1,35 @@ +# +# Copyright by The HDF Group. +# Copyright by the Board of Trustees of the University of Illinois. +# All rights reserved. +# +# This file is part of HDF5. The full HDF5 copyright notice, including +# terms governing use, modification, and redistribution, is contained in +# the files COPYING and Copyright.html. COPYING can be found at the root +# of the source code distribution tree; Copyright.html can be found at the +# root level of an installed copy of the electronic HDF5 document set and +# is linked from the top-level documents page. It can also be found at +# http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have +# access to either file, you may request a copy from help@hdfgroup.org. +## +## Makefile.am +## Run automake to generate a Makefile.in from this file. +# +# HDF5 Library Makefile(.in) +# + +include $(top_srcdir)/config/commence.am + +# Include src and tools/lib directories +AM_CPPFLAGS+=-I$(top_srcdir)/src -I$(top_srcdir)/tools/lib + +# Our main targets +bin_PROGRAMS=h5import + +# Add h5import specific linker flags here +h5import_LDFLAGS = $(LT_STATIC_EXEC) $(AM_LDFLAGS) + +# All programs depend on the main hdf5 library and the tools library +LDADD=$(LIBH5TOOLS) $(LIBHDF5) + +include $(top_srcdir)/config/conclude.am diff --git a/tools/src/h5import/h5import.c b/tools/src/h5import/h5import.c new file mode 100644 index 0000000..d1aab0c --- /dev/null +++ b/tools/src/h5import/h5import.c @@ -0,0 +1,4393 @@ +/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * + * Copyright by The HDF Group. * + * Copyright by the Board of Trustees of the University of Illinois. * + * All rights reserved. * + * * + * This file is part of HDF5. The full HDF5 copyright notice, including * + * terms governing use, modification, and redistribution, is contained in * + * the files COPYING and Copyright.html. COPYING can be found at the root * + * of the source code distribution tree; Copyright.html can be found at the * + * root level of an installed copy of the electronic HDF5 document set and * + * is linked from the top-level documents page. It can also be found at * + * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have * + * access to either file, you may request a copy from help@hdfgroup.org. * + * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ + +#include "hdf5.h" +#include "H5private.h" +#include <stdio.h> +#include <math.h> +#include <string.h> +#include <ctype.h> +#include "h5import.h" +#include "h5tools.h" +#include "h5tools_utils.h" + +/* Name of tool */ +#define PROGRAMNAME "h5import" + +#ifdef H5_HAVE_WIN32_API +#define READ_OPEN_FLAGS "rb" +#else +#define READ_OPEN_FLAGS "r" +#endif + +/* Local function declarations */ +static int gtoken(char *s); +static int process(struct Options *opt); +static int processConfigurationFile(char *infile, struct Input *in); +static int mapKeywordToIndex(char *key); +static int parsePathInfo(struct path_info *path, char *strm); +static int parseDimensions(struct Input *in, char *strm); +static int getInputSize(struct Input *in, int ival); +static int getInputClass(struct Input *in, char * strm); +static int getInputClassType(struct Input *in, char * strm); +static int InputClassStrToInt(char *temp); +static int getRank(struct Input *in, FILE *strm); +static int getDimensionSizes(struct Input *in, FILE *strm); +static int getOutputSize(struct Input *in, FILE *strm); +static int getOutputClass(struct Input *in, FILE *strm); +static int OutputClassStrToInt(char *temp); +static int getOutputArchitecture(struct Input *in, FILE *strm); +static int OutputArchStrToInt(const char *temp); +static int getOutputByteOrder(struct Input *in, FILE *strm); +static int OutputByteOrderStrToInt(const char *temp); +static int getChunkedDimensionSizes(struct Input *in, FILE *strm); +static int getCompressionType(struct Input *in, FILE *strm); +static int CompressionTypeStrToInt(char *temp); +static int getCompressionParameter(struct Input *in, FILE *strm); +static int getExternalFilename(struct Input *in, FILE *strm); +static int getMaximumDimensionSizes(struct Input *in, FILE *strm); +static int processDataFile(char *infile, struct Input *in, hid_t file_id); +static int readIntegerData(FILE *strm, struct Input *in); +static int readFloatData(FILE *strm, struct Input *in); +static int allocateIntegerStorage(struct Input *in); +static int allocateFloatStorage(struct Input *in); +static int readUIntegerData(FILE *strm, struct Input *in); +static int allocateUIntegerStorage(struct Input *in); +static int validateConfigurationParameters(struct Input *in); +static int processStrData(FILE *strm, struct Input *in, hid_t file_id); +static int processStrHDFData(FILE *strm, struct Input *in, hid_t file_id); + +int main(int argc, char *argv[]) +{ + struct Options opt; + int outfile_named = FALSE; + int token; + int i; + int state = 0; + struct Input *in = NULL; + + const char *err1 = "Invalid number of arguments: %d.\n"; + const char *err2 = "Error in state table.\n"; + const char *err3 = "No output file given.\n"; + const char *err4 = "Program aborted.\n"; + const char *err5 = "Invalid path %s.\n"; + const char *err6 = "Invalid dimensions - %s.\n"; + const char *err7 = "Invalid type of data - %s.\n"; + const char *err8 = "Invalid size of data - %s.\n"; + const char *err9 = "Cannot specify more than 30 input files in one call to h5import.\n"; + + h5tools_setprogname(PROGRAMNAME); + h5tools_setstatus(EXIT_SUCCESS); + + /* Initialize h5tools lib */ + h5tools_init(); + + (void) HDsetvbuf(stderr, (char *) NULL, _IOLBF, 0); + (void) HDsetvbuf(stdout, (char *) NULL, _IOLBF, 0); + + if (argv[1] && (HDstrcmp("-V", argv[1]) == 0)) { + print_version(PROGRAMNAME); + HDexit(EXIT_SUCCESS); + } + + /* + * validate the number of command line arguments + */ + if (argc < 2) { + (void) HDfprintf(stderr, err1, argc); + usage(argv[0]); + goto err; + } + + /* Initialize the file structure to 0 */ + HDmemset(&opt, 0, sizeof(struct Options)); + + /* + * parse the command line + */ + for (i = 1; i < argc; i++) { + if ((token = gtoken(argv[i])) == ERR) { + usage(argv[0]); + goto err; + } + + state = state_table[state][token]; + + switch (state) { + + case 1: /* counting input files */ + if (opt.fcount < 29) { + (void) HDstrcpy(opt.infiles[opt.fcount].datafile, argv[i]); + in = &(opt.infiles[opt.fcount].in); + opt.infiles[opt.fcount].config = 0; + setDefaultValues(in, opt.fcount); + opt.fcount++; + } + else { + (void) HDfprintf(stderr, err9, argv[i]); + goto err; + } + + break; + + case 2: /* -c found; look for configfile */ + break; + + case 3: /* get configfile name */ + (void) HDstrcpy(opt.infiles[opt.fcount-1].configfile, argv[i]); + opt.infiles[opt.fcount - 1].config = 1; + break; + + case 4: /* -o found; look for outfile */ + break; + + case 5: /* get outfile found */ + (void) HDstrcpy(opt.outfile, argv[i]); + outfile_named = TRUE; + break; + + case 6: /* -h found; help, then exit */ + help(argv[0]); + HDexit(EXIT_SUCCESS); + break; + + case 7: /* -d found; look for dimensions */ + break; + + case 8: /* read dimensions */ + if (parseDimensions(in, argv[i]) == -1) { + (void) HDfprintf(stderr, err6, argv[i]); + goto err; + } + break; + + case 9: /* -p found; look for path name */ + break; + + case 10: /* read path name */ + if (parsePathInfo(&in->path, argv[i]) == -1) { + (void) HDfprintf(stderr, err5, argv[i]); + goto err; + } + break; + + case 11: /* -t found; look for data type */ + break; + + case 12: /* read data type */ + if (getInputClass(in, argv[i]) == -1) { + (void) HDfprintf(stderr, err7, argv[i]); + goto err; + } + + if (in->inputClass == 0 || in->inputClass == 4) + in->outputClass = 0; + if (in->inputClass == 1 || in->inputClass == 2 || in->inputClass == 3) + in->outputClass = 1; + if (in->inputClass == 6 || in->inputClass == 7) + in->outputClass = 2; + break; + + case 13: /* -s found; look for data size */ + break; + + case 14: /* read data size */ + if (getInputSize(in, (int) HDstrtol(argv[i], NULL, BASE_10)) == -1) { + (void) HDfprintf(stderr, err8, argv[i]); + goto err; + } + /*set default value for output-size */ + in->outputSize = in->inputSize; + break; + + case ERR: /* command syntax error */ + default: + (void) HDfprintf(stderr, "%s", err2); + usage(argv[0]); + goto err; + } + } + + if (FALSE == outfile_named) { + (void) HDfprintf(stderr, "%s", err3); + usage(argv[0]); + goto err; + } + + if (process(&opt) == -1) + goto err; + + for (i = 0; i < opt.fcount; i++) { + in = &(opt.infiles[i].in); + if (in->sizeOfDimension) + HDfree(in->sizeOfDimension); + if (in->sizeOfChunk) + HDfree(in->sizeOfChunk); + if (in->maxsizeOfDimension) + HDfree(in->maxsizeOfDimension); + if (in->externFilename) + HDfree(in->externFilename); + if (in->data) + HDfree(in->data); + } + + return (EXIT_SUCCESS); +err: + (void) HDfprintf(stderr, "%s", err4); + for (i = 0; i < opt.fcount; i++) { + in = &(opt.infiles[i].in); + if (in->sizeOfDimension) + HDfree(in->sizeOfDimension); + if (in->sizeOfChunk) + HDfree(in->sizeOfChunk); + if (in->maxsizeOfDimension) + HDfree(in->maxsizeOfDimension); + if (in->externFilename) + HDfree(in->externFilename); + if (in->data) + HDfree(in->data); + } + return (EXIT_FAILURE); +} + +static int gtoken(char *s) +{ + size_t len; + int token = ERR; + + const char *err1 = "Illegal argument: %s.\n"; + + /* + * identify the token type + */ + if (s[0] == '-') { /* option name (or negative number) */ + len = HDstrlen(&s[1]); + switch (s[1]) { + case 'o': + if (!HDstrncmp("outfile", &s[1], len)) + token = OPT_o; + break; + + case 'c': + if (!HDstrncmp("config", &s[1], len)) + token = OPT_c; + break; + + case 'h': + if (!HDstrncmp("help", &s[1], len)) + token = OPT_h; + break; + + case 'd': + if (!HDstrncmp("dims", &s[1], len)) + token = OPT_d; + break; + + case 'p': + if (!HDstrncmp("path", &s[1], len)) + token = OPT_p; + break; + + case 't': + if (!HDstrncmp("type", &s[1], len)) + token = OPT_t; + break; + + case 's': + if (!HDstrncmp("size", &s[1], len)) + token = OPT_s; + break; + default: + token = ERR; /* not a supported option tag */ + break; + } + + if (token == ERR) + (void) HDfprintf(stderr, err1, s); + } + else { /* filename */ + token = FILNAME; + } + return (token); +} + +/*------------------------------------------------------------------------- + * Function: processDataFile + * + * Purpose: allocate memory and read data file + * + * Return: 0, success, -1, error + * + * Programmer: pkmat + * + * Modifications: pvn + * 7/23/2007. Added support for STR type, extra parameter FILE_ID + * + *------------------------------------------------------------------------- + */ + +static int processDataFile(char *infile, struct Input *in, hid_t file_id) +{ + FILE *strm = NULL; + const char *err1 = "Unable to open the input file %s for reading.\n"; + const char *err2 = "Error in allocating integer data storage.\n"; + const char *err3 = "Error in allocating floating-point data storage.\n"; + const char *err4 = "Error in reading integer data.\n"; + const char *err5 = "Error in reading floating-point data.\n"; + const char *err6 = "Error in allocating unsigned integer data storage.\n"; + const char *err7 = "Error in reading unsigned integer data.\n"; + const char *err10 = "Unrecognized input class type.\n"; + const char *err11 = "Error in reading string data.\n"; + int retval = -1; + + /*------------------------------------------------------------------------- + * special case for opening binary classes in H5_HAVE_WIN32_API + * "FP" denotes a floating point binary file, + * "IN" denotes a signed integer binary file, + * "UIN" denotes an unsigned integer binary file, + *------------------------------------------------------------------------- + */ + if (in->inputClass == 4 /* "IN" */|| in->inputClass == 3 /* "FP" */|| in->inputClass == 7 /* "UIN" */) { + + if ((strm = HDfopen(infile, READ_OPEN_FLAGS)) == NULL) { + (void) HDfprintf(stderr, err1, infile); + goto error; + } + } + /*------------------------------------------------------------------------- + * if the input class is not binary, just use "r" + *------------------------------------------------------------------------- + */ + else { + if ((strm = HDfopen(infile, "r")) == NULL) { + (void) HDfprintf(stderr, err1, infile); + goto error; + } + } + + switch (in->inputClass) { + case 0: /* TEXTIN */ + case 4: /* IN */ + if (allocateIntegerStorage(in) == -1) { + (void) HDfprintf(stderr, err2, infile); + goto error; + } + + if (readIntegerData(strm, in) == -1) { + (void) HDfprintf(stderr, err4, infile); + goto error; + } + break; + + case 1: /* TEXTFP */ + case 2: /* TEXTFPE */ + case 3: /* FP */ + if (allocateFloatStorage(in) == -1) { + (void) HDfprintf(stderr, err3, infile); + goto error; + + } + + if (readFloatData(strm, in) == -1) { + (void) HDfprintf(stderr, err5, infile); + goto error; + } + break; + + case 5: /* STR */ + if (in->h5dumpInput) { + if (processStrHDFData(strm, in, file_id) == -1) { + (void) HDfprintf(stderr, err11, infile); + goto error; + } + } + else { + if (processStrData(strm, in, file_id) == -1) { + (void) HDfprintf(stderr, err11, infile); + goto error; + } + } + + break; + + case 6: /* TEXTUIN */ + case 7: /* UIN */ + if (allocateUIntegerStorage(in) == -1) { + (void) HDfprintf(stderr, err6, infile); + goto error; + } + if (readUIntegerData(strm, in) == -1) { + (void) HDfprintf(stderr, err7, infile); + goto error; + } + break; + + default: + (void) HDfprintf(stderr, "%s", err10); + goto error; + } + + /* Set success return value */ + retval = 0; + +error: + if(strm) + HDfclose(strm); + return(retval); +} + +static int readIntegerData(FILE *strm, struct Input *in) +{ + H5DT_INT8 *in08; + H5DT_INT16 *in16; + H5DT_INT16 temp; + H5DT_INT32 *in32; +#ifdef H5_SIZEOF_LONG_LONG + H5DT_INT64 *in64; + char buffer[256]; +#endif + hsize_t len = 1; + hsize_t i; + int j; + + const char *err1 = "Unable to get integer value from file.\n"; + const char *err2 = "Unrecognized input class type.\n"; + const char *err3 = "Invalid input size.\n"; + + for (j = 0; j < in->rank; j++) + len *= in->sizeOfDimension[j]; + + switch (in->inputSize) { + case 8: + switch (in->inputClass) { + case 0: /* TEXTIN */ + in08 = (H5DT_INT8 *) in->data; + for (i = 0; i < len; i++, in08++) { + if (fscanf(strm, "%hd", &temp) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + (*in08) = (H5DT_INT8) temp; + } + break; + + case 4: /* IN */ + in08 = (H5DT_INT8 *) in->data; + for (i = 0; i < len; i++, in08++) { + if (HDfread((char *) in08, sizeof(H5DT_INT8), 1, strm) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + } + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + break; + + case 16: + in16 = (H5DT_INT16 *) in->data; + switch (in->inputClass) { + case 0: /* TEXTIN */ + for (i = 0; i < len; i++, in16++) { + if (fscanf(strm, "%hd", in16) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + } + in16 = (H5DT_INT16 *) in->data; + break; + + case 4: /* IN */ + for (i = 0; i < len; i++, in16++) { + if (HDfread((char *) in16, sizeof(H5DT_INT16), 1, strm) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + } + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + break; + + case 32: + in32 = (H5DT_INT32 *) in->data; + switch (in->inputClass) { + case 0: /* TEXTIN */ + for (i = 0; i < len; i++, in32++) { + if (fscanf(strm, "%d", in32) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + } + break; + + case 4: /* IN */ + for (i = 0; i < len; i++, in32++) { + if (HDfread((char *) in32, sizeof(H5DT_INT32), 1, strm) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + } + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + break; + +#ifdef H5_SIZEOF_LONG_LONG + case 64: + in64 = (H5DT_INT64 *) in->data; + switch (in->inputClass) { + case 0: /* TEXTIN */ + for (i = 0; i < len; i++, in64++) { + if (fscanf(strm, "%s", buffer) < 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + *in64 = (H5DT_INT64) HDstrtoll(buffer, NULL, 10); + } + break; + + case 4: /* IN */ + for (i = 0; i < len; i++, in64++) { + if (HDfread((char *) in64, sizeof(H5DT_INT64), 1, strm) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + } + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + break; +#endif /* ifdef H5_SIZEOF_LONG_LONG */ + + default: + (void) HDfprintf(stderr, "%s", err3); + break; + } + return (0); +} + +static int readUIntegerData(FILE *strm, struct Input *in) +{ + H5DT_UINT8 *in08; + H5DT_UINT16 *in16; + H5DT_UINT16 temp; + H5DT_UINT32 *in32; +#ifdef H5_SIZEOF_LONG_LONG + H5DT_UINT64 *in64; + char buffer[256]; +#endif + hsize_t len = 1; + hsize_t i; + int j; + const char *err1 = "Unable to get unsigned integer value from file.\n"; + const char *err2 = "Unrecognized input class type.\n"; + const char *err3 = "Invalid input size.\n"; + + for (j = 0; j < in->rank; j++) + len *= in->sizeOfDimension[j]; + + switch (in->inputSize) { + case 8: + switch (in->inputClass) { + case 6: /* TEXTUIN */ + in08 = (H5DT_UINT8 *) in->data; + for (i = 0; i < len; i++, in08++) { + if (fscanf(strm, "%hu", &temp) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + (*in08) = (H5DT_UINT8) temp; + } + break; + + case 7: /* UIN */ + in08 = (H5DT_UINT8 *) in->data; + for (i = 0; i < len; i++, in08++) { + if (HDfread((char *) in08, sizeof(H5DT_UINT8), 1, strm) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + } + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + break; + + case 16: + in16 = (H5DT_UINT16 *) in->data; + switch (in->inputClass) { + case 6: /* TEXTUIN */ + for (i = 0; i < len; i++, in16++) { + if (fscanf(strm, "%hu", in16) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + } + break; + + case 7: /* UIN */ + for (i = 0; i < len; i++, in16++) { + if (HDfread((char *) in16, sizeof(H5DT_UINT16), 1, strm) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + } + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + break; + + case 32: + in32 = (H5DT_UINT32 *) in->data; + switch (in->inputClass) { + case 6: /* TEXTUIN */ + for (i = 0; i < len; i++, in32++) { + if (fscanf(strm, "%u", in32) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + } + break; + + case 7: /* UIN */ + for (i = 0; i < len; i++, in32++) { + if (HDfread((char *) in32, sizeof(H5DT_UINT32), 1, strm) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + } + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + break; + +#ifdef H5_SIZEOF_LONG_LONG + case 64: + in64 = (H5DT_UINT64 *) in->data; + switch (in->inputClass) { + case 6: /* TEXTUIN */ + for (i = 0; i < len; i++, in64++) { + if (fscanf(strm, "%s", buffer) < 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + *in64 = (H5DT_UINT64) HDstrtoll(buffer, NULL, 10); + } + break; + + case 7: /* UIN */ + for (i = 0; i < len; i++, in64++) { + if (HDfread((char *) in64, sizeof(H5DT_UINT64), 1, strm) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + } + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + break; +#endif /* ifdef H5_SIZEOF_LONG_LONG */ + + default: + (void) HDfprintf(stderr, "%s", err3); + break; + } + return (0); +} + +static int readFloatData(FILE *strm, struct Input *in) +{ + H5DT_FLOAT32 *fp32; + H5DT_FLOAT64 *fp64; + + hsize_t len = 1; + hsize_t i; + int j; + const char *err1 = "Unable to get integer value from file.\n"; + const char *err2 = "Unrecognized input class type.\n"; + const char *err3 = "Invalid input size type.\n"; + + for (j = 0; j < in->rank; j++) + len *= in->sizeOfDimension[j]; + + switch (in->inputSize) { + case 32: + fp32 = (H5DT_FLOAT32 *) in->data; + switch (in->inputClass) { + case 1: /* TEXTFP */ + for (i = 0; i < len; i++, fp32++) { + if (fscanf(strm, "%f", fp32) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + } + + fp32 = (H5DT_FLOAT32 *) in->data; + break; + + /* same as TEXTFP */ + case 2: /*TEXTFPE */ + + for (i = 0; i < len; i++, fp32++) { + if (fscanf(strm, "%f", fp32) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + } + + fp32 = (H5DT_FLOAT32 *) in->data; + break; + + case 3: /* FP */ + for (i = 0; i < len; i++, fp32++) { + if (HDfread((char *) fp32, sizeof(H5DT_FLOAT32), 1, strm) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + } + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + break; + + case 64: + fp64 = (H5DT_FLOAT64 *) in->data; + switch (in->inputClass) { + case 1: /* TEXTFP */ + for (i = 0; i < len; i++, fp64++) { + if (fscanf(strm, "%lf", fp64) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + } + + fp64 = (H5DT_FLOAT64 *) in->data; + break; + + /* same as TEXTFP */ + case 2: /*TEXTFPE */ + + for (i = 0; i < len; i++, fp64++) { + if (fscanf(strm, "%lf", fp64) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + } + + fp64 = (H5DT_FLOAT64 *) in->data; + break; + + case 3: /* FP */ + for (i = 0; i < len; i++, fp64++) { + if (HDfread((char *) fp64, sizeof(H5DT_FLOAT64), 1, strm) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + } + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + break; + + default: + (void) HDfprintf(stderr, "%s", err3); + break; + } + return (0); +} + +/*------------------------------------------------------------------------- + * Function: processStrData + * + * Purpose: read an ASCII file with string data and generate an HDF5 dataset + * with a variable length type + * + * Return: 0, ok, -1 no + * + * Programmer: Pedro Vicente, pvn@hdfgroup.org + * + * Date: July, 26, 2007 + * + *------------------------------------------------------------------------- + */ +static int processStrData(FILE *strm, struct Input *in, hid_t file_id) +{ + hid_t group_id; + hid_t dset_id; + hid_t space_id; + hid_t mspace_id; + hid_t type_id; + hid_t handle; + hsize_t dims[1]; + char str[1024]; + int c; + int i = 0; + int j; + hsize_t nlines = 0; + hsize_t line; + + /*------------------------------------------------------------------------- + * get number of lines in the input file + *------------------------------------------------------------------------- + */ + + while(EOF != (c = HDfgetc(strm))) + if (c == 10) /* eol */ + nlines++; + + if (!nlines) + return 0; + + /* number of records */ + dims[0] = nlines; + + /* rewind */ + HDfseek(strm, 0L, 0); + + /*------------------------------------------------------------------------- + * read file again and generate an HDF5 dataset + *------------------------------------------------------------------------- + */ + + if ((type_id = H5Tcopy(H5T_C_S1)) < 0) + goto out; + + if (H5Tset_size(type_id, H5T_VARIABLE) < 0) + goto out; + + /* disable error reporting */ + H5E_BEGIN_TRY + { + /* create parent groups */ + if (in->path.count > 1) { + j = 0; + handle = file_id; + while (j < in->path.count - 1) { + if ((group_id = H5Gopen2(handle, in->path.group[j], H5P_DEFAULT)) < 0) { + group_id = H5Gcreate2(handle, in->path.group[j++], H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + for (; j < in->path.count - 1; j++) + group_id = H5Gcreate2(group_id, in->path.group[j], H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + handle = group_id; + break; + } + handle = group_id; + j++; + } + } + else { + handle = file_id; + j = 0; + } + + /*enable error reporting */ + } + H5E_END_TRY; + + if ((space_id = H5Screate_simple(1, dims, NULL)) < 0) + goto out; + + if ((mspace_id = H5Screate(H5S_SCALAR)) < 0) + goto out; + + if ((dset_id = H5Dcreate2(handle, in->path.group[j], type_id, space_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) + goto out; + + line = 0; + + while(EOF != (c = HDfgetc(strm))) { + str[i] = (char)c; + + i++; + + if (c == 10) { /* eol */ + char *str2 = str; + hid_t fspace_id; + hsize_t start[1]; + hsize_t count[1] = { 1 }; + + str[i - 1] = '\0'; /* terminate string */ + + if ((fspace_id = H5Dget_space(dset_id)) < 0) + goto out; + + start[0] = line++; + + if (H5Sselect_hyperslab(fspace_id, H5S_SELECT_SET, start, NULL, count, NULL) < 0) + goto out; + + if (H5Dwrite(dset_id, type_id, mspace_id, fspace_id, H5P_DEFAULT, &str2) < 0) + goto out; + + if (H5Sclose(fspace_id) < 0) + goto out; + + i = 0; + str[0] = '\0'; + + } + } + + /* close */ + H5Dclose(dset_id); + H5Sclose(space_id); + H5Sclose(mspace_id); + H5Tclose(type_id); + + return (0); + +out: + + return (-1); +} + +/*------------------------------------------------------------------------- + * Function: processStrData + * + * Purpose: read an ASCII file with string data and generate an HDF5 dataset + * with a variable length type + * + * Return: 0, ok, -1 no + * + *------------------------------------------------------------------------- + */ +static int processStrHDFData(FILE *strm, struct Input *in, hid_t file_id) +{ + hid_t group_id = -1; + hid_t dset_id = -1; + hid_t space_id = -1; + hid_t mspace_id = -1; + hid_t type_id = -1; + hid_t handle = -1; + char *str1 = NULL; + char *str2 = NULL; + char *str3 = NULL; + char str[1024] = ""; + int j; + hsize_t line; + + /*------------------------------------------------------------------------- + * read file and generate an HDF5 dataset + *------------------------------------------------------------------------- + */ +#ifdef H5DEBUGIMPORT + printf("processStrHDFData DATATYPE STRING\n"); +#endif + + if ((type_id = H5Tcopy(H5T_C_S1)) < 0) + goto out; + + if (H5Tset_size(type_id, H5T_VARIABLE) < 0) + goto out; + + /* disable error reporting */ + H5E_BEGIN_TRY + { + /* create parent groups */ + if (in->path.count > 1) { + j = 0; + handle = file_id; + while (j < in->path.count - 1) { + if ((group_id = H5Gopen2(handle, in->path.group[j], H5P_DEFAULT)) < 0) { + group_id = H5Gcreate2(handle, in->path.group[j++], H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + for (; j < in->path.count - 1; j++) + group_id = H5Gcreate2(group_id, in->path.group[j], H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + handle = group_id; + break; + } + handle = group_id; + j++; + } + } + else { + handle = file_id; + j = 0; + } + + /*enable error reporting */ + } + H5E_END_TRY; +#ifdef H5DEBUGIMPORT + printf("processStrHDFData DATATYPE STRING groups created\n"); +#endif + + if ((space_id = H5Screate_simple(in->rank, in->sizeOfDimension, NULL)) < 0) + goto out; + + if ((mspace_id = H5Screate(H5S_SCALAR)) < 0) + goto out; + + if ((dset_id = H5Dcreate2(handle, in->path.group[j], type_id, space_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) + goto out; + +#ifdef H5DEBUGIMPORT + printf("processStrHDFData DATATYPE STRING ready to process strings\n"); +#endif + line = 0; + j = 0; + + while (HDfgets(str,sizeof(str),strm)) { + str1 = str; + str2 = NULL; + str3 = NULL; +#ifdef H5DEBUGIMPORT + printf("processStrHDFData DATATYPE STRING[%llu]={%s}\n", (unsigned long long)line, str1); +#endif + /* process string to remove the first and last quote char */ + str2 = strchr(str1, '"'); + if (str2 != NULL) { +#ifdef H5DEBUGIMPORT + printf("processStrHDFData DATATYPE STRING len:%d for {%s}\n", strlen(str2), str2); +#endif + str2++; +#ifdef H5DEBUGIMPORT + printf("processStrHDFData DATATYPE STRING len:%d for {%s}\n", strlen(str2), str2); +#endif + str3 = strrchr(str2, '"'); + if (str3 != NULL) { +#ifdef H5DEBUGIMPORT + printf("processStrHDFData DATATYPE STRING len:%d for {%s}\n", strlen(str3), str3); +#endif + *str3 = '\0'; + +#ifdef H5DEBUGIMPORT + printf("processStrHDFData DATATYPE STRING len:%d for {%s}\n", strlen(str2), str2); +#endif + + if(strlen(str2) > 0) { + hid_t fspace_id; + hsize_t start[1]; + hsize_t count[1] = { 1 }; + +#ifdef H5DEBUGIMPORT + printf("processStrHDFData DATATYPE STRING[%llu] store %s\n", (unsigned long long)line, str2); +#endif + if ((fspace_id = H5Dget_space(dset_id)) < 0) + goto out; + + start[0] = line++; + + if (H5Sselect_hyperslab(fspace_id, H5S_SELECT_SET, start, NULL, count, NULL) < 0) + goto out; + + if (H5Dwrite(dset_id, type_id, mspace_id, fspace_id, H5P_DEFAULT, &str2) < 0) + goto out; + + if (H5Sclose(fspace_id) < 0) + goto out; + } + } + } + str[0] = '\0'; + j++; + } +#ifdef H5DEBUGIMPORT + printf("processStrHDFData DATATYPE STRING eof reached\n"); +#endif + + /* close */ + H5Dclose(dset_id); + H5Sclose(space_id); + H5Sclose(mspace_id); + H5Tclose(type_id); + + return (0); + +out: +#ifdef H5DEBUGIMPORT + printf("processStrHDFData DATATYPE STRING error exit\n"); +#endif +/* disable error reporting */ +H5E_BEGIN_TRY +{ + /* close */ + H5Dclose(dset_id); + H5Sclose(space_id); + H5Sclose(mspace_id); + H5Tclose(type_id); +} +H5E_END_TRY; + + return (-1); +} + +static int allocateIntegerStorage(struct Input *in) +{ + hsize_t len = 1; + int j; + const char *err1 = "Unable to allocate dynamic memory.\n"; + const char *err2 = "Invalid storage size for integer input data.\n"; + + for (j = 0; j < in->rank; j++) + len *= in->sizeOfDimension[j]; + + switch (in->inputSize) { + case 8: + if ((in->data = (VOIDP) HDmalloc((size_t) len * sizeof(H5DT_INT8))) == NULL) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + break; + + case 16: + if ((in->data = (VOIDP) HDmalloc((size_t) len * sizeof(H5DT_INT16))) == NULL) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + break; + + case 32: + if ((in->data = (VOIDP) HDmalloc((size_t) len * sizeof(H5DT_INT32))) == NULL) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + break; + + case 64: + if ((in->data = (VOIDP) HDmalloc((size_t) len * sizeof(H5DT_INT64))) == NULL) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + break; + } + return (0); +} + +static int allocateUIntegerStorage(struct Input *in) +{ + hsize_t len = 1; + const char *err1 = "Unable to allocate dynamic memory.\n"; + const char *err2 = "Invalid storage size for unsigned integer input data.\n"; + int j; + + for (j = 0; j < in->rank; j++) + len *= in->sizeOfDimension[j]; + + switch (in->inputSize) { + case 8: + if ((in->data = (VOIDP) HDmalloc((size_t) len * sizeof(H5DT_UINT8))) == NULL) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + break; + + case 16: + if ((in->data = (VOIDP) HDmalloc((size_t) len * sizeof(H5DT_UINT16))) == NULL) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + break; + + case 32: + if ((in->data = (VOIDP) HDmalloc((size_t) len * sizeof(H5DT_UINT32))) == NULL) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + break; + + case 64: + if ((in->data = (VOIDP) HDmalloc((size_t) len * sizeof(H5DT_UINT64))) == NULL) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + break; + } + return (0); +} + +static int allocateFloatStorage(struct Input *in) +{ + hsize_t len = 1; + int j; + const char *err1 = "Unable to allocate dynamic memory.\n"; + const char *err2 = "Invalid storage size for float input data.\n"; + + for (j = 0; j < in->rank; j++) + len *= in->sizeOfDimension[j]; + + switch (in->inputSize) { + case 32: + if ((in->data = (VOIDP) HDmalloc((size_t) len * sizeof(H5DT_FLOAT32))) == NULL) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + break; + + case 64: + if ((in->data = (VOIDP) HDmalloc((size_t) len * sizeof(H5DT_FLOAT64))) == NULL) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + break; + } + return (0); +} + +static int processConfigurationFile(char *infile, struct Input *in) +{ + FILE *strm = NULL; + char key[255]; + int kindex; + char temp[255]; + int ival; + int scanret; + int retval = -1; + + const char *err1 = "Unable to open the configuration file: %s for reading.\n"; + const char *err2 = "Unknown keyword in configuration file: %s\n"; + const char *err3a = "PATH keyword appears twice in %s.\n"; + const char *err3b = "Error in parsing the path information from %s.\n"; + const char *err4a = "INPUT-CLASS keyword appears twice in %s.\n"; + const char *err4b = "Error in retrieving the input class from %s.\n"; + const char *err5a = "INPUT-SIZE keyword appears twice in %s.\n"; + const char *err5b = "Error in retrieving the input size from %s.\n"; + const char *err6a = "RANK keyword appears twice in %s.\n"; + const char *err6b = "Error in retrieving the rank from %s.\n"; + const char *err7a = "DIMENSION-SIZES keyword appears twice in %s.\n"; + const char *err7b = "DIMENSION-SIZES cannot appear before RANK is provided.\n"; + const char *err7c = "Error in retrieving the dimension sizes from %s.\n"; + const char *err8a = "OUTPUT-CLASS keyword appears twice in %s.\n"; + const char *err8b = "Error in retrieving the output class from %s.\n"; + const char *err9a = "OUTPUT-SIZE keyword appears twice in %s.\n"; + const char *err9b = "Error in retrieving the output size from %s.\n"; + const char *err10a = "OUTPUT-ARCHITECTURE keyword appears twice in %s.\n"; + const char *err10b = "Error in retrieving the output architecture from %s.\n"; + const char *err11a = "OUTPUT-BYTE-ORDER keyword appears twice in %s.\n"; + const char *err11b = "Error in retrieving the output byte order from %s.\n"; + const char *err12a = "CHUNKED-DIMENSION-SIZES keyword appears twice in %s.\n"; + const char *err12b = "CHUNKED-DIMENSION-SIZES cannot appear before DIMENSION-SIZES are provided.\n"; + const char *err12c = "Error in retrieving the chunked dimension sizes from %s.\n"; + const char *err13a = "COMPRESSION-TYPE keyword appears twice in %s.\n"; + const char *err13b = "Error in retrieving the compression type from %s.\n"; + const char *err14a = "COMPRESSION-PARAM keyword appears twice in %s.\n"; + const char *err14b = "Error in retrieving the compression parameter from %s.\n"; + const char *err15a = "EXTERNAL-STORAGE keyword appears twice in %s.\n"; + const char *err15b = "Error in retrieving the external storage paramters from %s.\n"; + const char *err16a = "MAXIMUM-DIMENSIONS keyword appears twice in %s.\n"; + const char *err16b = "MAXIMUM-DIMENSIONS cannot appear before DIMENSION-SIZES are provided.\n"; + const char *err16c = "Error in retrieving the maximum dimension sizes from %s.\n"; + const char *err17 = "Configuration parameters are invalid in %s.\n"; + const char *err18 = "Unable to get string value.\n"; + const char *err19 = "Unable to get integer value.\n"; + + /* create vector to map which keywords have been found + check vector after each keyword to check for violation + at the end check vector to see if required fields have been provided + process the output file according to the options + */ + + if ((strm = HDfopen(infile, "r")) == NULL) { + (void) HDfprintf(stderr, err1, infile); + goto error; + } + + scanret = fscanf(strm, "%s", key); + if((scanret == 1) && !HDstrcmp("HDF5", key)) { +#ifdef H5DEBUGIMPORT + int pndx; + printf("\nh5dump file\n"); +#endif + in->h5dumpInput = 1; + scanret = fscanf(strm, "%s", temp); /* filename */ + scanret = fscanf(strm, "%s", temp); /* start bracket */ + scanret = fscanf(strm, "%s", key); /* DATASET */ + while (scanret == 1) { + if(!HDstrcmp("DATASET", key)) { /* PATH */ +#ifdef H5DEBUGIMPORT + printf("h5dump DATASET key\n"); +#endif + if (in->configOptionVector[PATH] == 1) { + (void) HDfprintf(stderr, err3a, infile); + goto error; + } + if (fscanf(strm, "%s", temp) != 1) { + (void) HDfprintf(stderr, "%s", err18); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump DATASET %s found\n", temp); +#endif + if (parsePathInfo(&in->path, temp) == -1) { + (void) HDfprintf(stderr, err3b, infile); + goto error; + } + in->configOptionVector[PATH] = 1; + scanret = fscanf(strm, "%s", temp); /* start bracket */ +#ifdef H5DEBUGIMPORT + printf("h5dump DATASET %s found\n", temp); +#endif + } /* if(!HDstrcmp("DATASET", key)) PATH */ + else if(!HDstrcmp("DATATYPE", key)) { /* INPUT-CLASS */ +#ifdef H5DEBUGIMPORT + printf("h5dump DATATYPE key\n"); +#endif + if (in->configOptionVector[INPUT_CLASS] == 1) { + (void) HDfprintf(stderr, err4a, infile); + goto error; + } + + if (fscanf(strm, "%s", temp) != 1) { + (void) HDfprintf(stderr, "%s", err18); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump DATATYPE %s found\n", temp); +#endif + if ((kindex = getInputClassType(in, temp)) == -1) { + (void) HDfprintf(stderr, err4b, infile); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump DATATYPE type %d inputClass\n", in->inputClass); +#endif + + in->configOptionVector[INPUT_CLASS] = 1; + + /*set default value for output-class */ + if (in->configOptionVector[OUTPUT_CLASS] == 0) { + if (in->inputClass == 0 || in->inputClass == 4) + in->outputClass = 0; + if (in->inputClass == 1 || in->inputClass == 2 + || in->inputClass == 3) + in->outputClass = 1; + if (in->inputClass == 6 || in->inputClass == 7) + in->outputClass = 2; + } +#ifdef H5DEBUGIMPORT + printf("h5dump DATATYPE type %d outputClass\n", in->outputClass); +#endif + + if(in->inputClass == 5) { /* STRING */ + int get_next_prop = 1; + in->outputClass = -1; +#ifdef H5DEBUGIMPORT + printf("h5dump DATATYPE STRING found\n"); +#endif + if (fscanf(strm, "%s", temp) != 1) { /* start bracket */ + (void) HDfprintf(stderr, "%s", err18); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump DATATYPE STRING %s found\n", temp); +#endif + if (fscanf(strm, "%s", temp) != 1) { /* string properties */ + (void) HDfprintf(stderr, "%s", err18); + goto error; + } + while (get_next_prop) { + if(!HDstrcmp("STRSIZE", temp)) { /* STRSIZE */ + if (fscanf(strm, "%s", temp) != 1) { + (void) HDfprintf(stderr, "%s", err19); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump DATATYPE STRING STRSIZE %s found\n", temp); +#endif + if (HDstrcmp("H5T_VARIABLE;", temp)) { + char *more = temp; + ival = (int)HDstrtol(more, &more, 10); + if (getInputSize(in, ival) == -1) { + (void) HDfprintf(stderr, err5b, infile); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump DATATYPE STRING %d InputSize\n", in->inputSize); +#endif + } + } + else if(!HDstrcmp("STRPAD", temp)) { /* STRPAD */ + if (fscanf(strm, "%s", temp) != 1) { /* STRPAD type */ + (void) HDfprintf(stderr, "%s", err18); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump DATATYPE STRING STRPAD %s found\n", temp); +#endif + } + else if(!HDstrcmp("CSET", key)) { /* CSET */ + if (fscanf(strm, "%s", temp) != 1) { /* CSET type */ + (void) HDfprintf(stderr, "%s", err18); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump DATATYPE STRING CSET %s found\n", temp); +#endif + + } + else if(!HDstrcmp("CTYPE", temp)) { /* CTYPE */ + if (fscanf(strm, "%s", temp) != 1) { /* CTYPE type */ + (void) HDfprintf(stderr, "%s", err18); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump DATATYPE STRING CTYPE %s found\n", temp); +#endif + } /* if(!HDstrcmp("CSET", key)) */ + if (fscanf(strm, "%s", temp) != 1) { + (void) HDfprintf(stderr, "%s", err18); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump DATATYPE STRING %s found\n", temp); +#endif + if(!HDstrcmp("}", temp)) { /* end bracket */ + get_next_prop = 0; + } + } /* while (get_next_prop) */ + } /* if(kindex == 5) STRING */ + } /* else if(!HDstrcmp("DATATYPE", key)) INPUT-CLASS */ + else if(!HDstrcmp("DATASPACE", key)) { /* RANK and DIMENSIONS */ + hsize_t temp_dims[MAX_NUM_DIMENSION]; + +#ifdef H5DEBUGIMPORT + printf("h5dump DATASPACE key\n"); +#endif + if (fscanf(strm, "%s", temp) != 1) { + (void) HDfprintf(stderr, "%s", err18); + goto error; + } + if(!HDstrcmp("SCALAR", temp)) { /* SCALAR */ + in->rank = 0; + } /* if(!HDstrcmp("SCALAR", key)) */ + else if(!HDstrcmp("NULL", temp)) { /* NULL */ + (void) HDfprintf(stderr, err6b, infile); + goto error; + } /* else if(!HDstrcmp("NULL", key)) */ + else if(!HDstrcmp("SIMPLE", temp)) { /* SIMPLE */ + int icount = 0; +#ifdef H5DEBUGIMPORT + printf("h5dump DATASPACE SIMPLE found\n"); +#endif + if (fscanf(strm, "%s", temp) != 1) { /* start bracket */ + (void) HDfprintf(stderr, err6b, infile); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump DATASPACE SIMPLE %s found\n", temp); +#endif + if (fscanf(strm, "%s", temp) != 1) { /* start paren */ + (void) HDfprintf(stderr, err6b, infile); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump DATASPACE SIMPLE %s found\n", temp); +#endif + if(!HDstrcmp("(", temp)) { /* start paren */ + int get_next_dim = 1; + int i = 0; + + if (fscanf(strm, "%s", temp) != 1) { /* Dimension with optional comma */ + (void) HDfprintf(stderr, err16c, infile); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump DATASPACE SIMPLE %s found\n", temp); +#endif + while (get_next_dim) { + char *more = temp; + temp_dims[icount] = HDstrtoull(more, &more, 10); + if (fscanf(strm, "%s", temp) != 1) { /* Dimension or end paren */ + (void) HDfprintf(stderr, err6b, infile); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump DATASPACE SIMPLE %s found\n", temp); +#endif + if(!HDstrcmp(")", temp)) { /* end paren */ + in->rank = ++icount; + in->configOptionVector[RANK] = 1; + get_next_dim = 0; + } + else { /* Dimension */ + icount++; + if (icount > MAX_NUM_DIMENSION) { + (void) HDfprintf(stderr, "Invalid value for rank.\n"); + goto error; + } + } + } /* while (get_next_dim) */ + + if ((in->sizeOfDimension = (hsize_t *) HDmalloc ((size_t) in->rank * sizeof(hsize_t))) == NULL) { + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump DATASPACE SIMPLE %d rank\n", in->rank); +#endif + for (i = 0; i < in->rank; i++) { + in->sizeOfDimension[i] = temp_dims[i]; + } +#ifdef H5DEBUGIMPORT + printf("h5dump DATASPACE SIMPLE dims:", in->rank); + for (pndx = 0; pndx < in->rank; pndx++) { + printf(" %d", in->sizeOfDimension[pndx]); + } + printf("\n"); +#endif + in->configOptionVector[DIM] = 1; + } /* if(!HDstrcmp("(", key)) start paren */ + else { + (void) HDfprintf(stderr, err5b, infile); + goto error; + } + if (fscanf(strm, "%s", temp) != 1) { + (void) HDfprintf(stderr, "%s", err18); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump DATASPACE SIMPLE %s found\n", temp); +#endif + if(!HDstrcmp("/", temp)) { /* / max dims */ + if ((in->maxsizeOfDimension = (hsize_t *) HDmalloc ((size_t) in->rank * sizeof(hsize_t))) == NULL) { + goto error; + } + if (fscanf(strm, "%s", temp) != 1) { /* start paren */ + (void) HDfprintf(stderr, err6b, infile); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump DATASPACE SIMPLE %s found\n", temp); +#endif + if(!HDstrcmp("(", temp)) { /* start paren */ + int get_next_dim = 1; + int i = 0; + +#ifdef H5DEBUGIMPORT + printf("h5dump DATASPACE SIMPLE process max dim values\n"); +#endif + if (fscanf(strm, "%s", temp) != 1) { /* max dim with optional comma */ + (void) HDfprintf(stderr, err16c, infile); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump DATASPACE SIMPLE %s found\n", temp); +#endif + while (get_next_dim) { +#ifdef H5DEBUGIMPORT + printf("h5dump DATASPACE SIMPLE get max dim value\n"); +#endif + if(!HDstrcmp("H5S_UNLIMITED", temp) || !HDstrcmp("H5S_UNLIMITED,", temp)) { /* unlimited */ + in->maxsizeOfDimension[i] = H5S_UNLIMITED; + in->configOptionVector[EXTEND] = 1; + } + else { + char *more = temp; + in->maxsizeOfDimension[i] = HDstrtoull(more, &more, 10); + } + if (fscanf(strm, "%s", temp) != 1) { /* max dim or end paren */ + (void) HDfprintf(stderr, err16c, infile); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump DATASPACE SIMPLE %s found\n", temp); +#endif + if(!HDstrcmp(")", temp)) { /* end paren */ + get_next_dim = 0; + } + else { /* comma */ + i++; + if (i > MAX_NUM_DIMENSION) { + (void) HDfprintf(stderr, "Invalid value for rank.\n"); + goto error; + } + } + } /* while (get_next_dim) */ +#ifdef H5DEBUGIMPORT + printf("h5dump DATASPACE SIMPLE maxdims:", in->rank); + for (pndx = 0; pndx < in->rank; pndx++) { + printf(" %d", in->maxsizeOfDimension[pndx]); + } + printf("\n"); + printf("h5dump DATASPACE SIMPLE get max dim finished\n"); +#endif + } /* if(!HDstrcmp("(", key)) start paren */ + else { + (void) HDfprintf(stderr, err16c, infile); + goto error; + } + scanret = fscanf(strm, "%s", temp); /* end bracket */ +#ifdef H5DEBUGIMPORT + printf("h5dump DATASPACE SIMPLE %s found\n", temp); +#endif + } /* if(!HDstrcmp("/", key)) max dims separator */ + } /* else if(!HDstrcmp("SIMPLE", key)) */ + else { + (void) HDfprintf(stderr, err5b, infile); + goto error; + } + } /* else if(!HDstrcmp("DATASPACE", key)) RANK and DIMENSIONS */ + else if(!HDstrcmp("STORAGE_LAYOUT", key)) { /* CHUNKED-DIMENSION-SIZES */ +#ifdef H5DEBUGIMPORT + printf("h5dump STORAGE_LAYOUT key\n"); +#endif + if (fscanf(strm, "%s", temp) != 1) { /* start bracket */ + (void) HDfprintf(stderr, err6b, infile); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump STORAGE_LAYOUT %s found\n", temp); +#endif + if (fscanf(strm, "%s", temp) != 1) { /* CHUNKED */ + (void) HDfprintf(stderr, err6b, infile); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump STORAGE_LAYOUT %s found\n", temp); +#endif + if(!HDstrcmp("CHUNKED", temp)) { /* CHUNKED */ + if ((in->sizeOfChunk = (hsize_t *) HDmalloc ((size_t) in->rank * sizeof(hsize_t))) == NULL) { + (void) HDfprintf(stderr, "Unable to allocate dynamic memory.\n"); + goto error; + } + if (fscanf(strm, "%s", temp) != 1) { /* start paren */ + (void) HDfprintf(stderr, err6b, infile); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump STORAGE_LAYOUT CHUNKED %s found\n", temp); +#endif + if(!HDstrcmp("(", temp)) { /* start paren */ + int get_next_dim = 1; + int icount = 0; + + if (fscanf(strm, "%s", temp) != 1) { /* Dimension with optional comma */ + (void) HDfprintf(stderr, err16c, infile); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump STORAGE_LAYOUT CHUNKED %s found\n", temp); +#endif + while (get_next_dim) { + char *more = temp; + in->sizeOfChunk[icount] = HDstrtoull(more, &more, 10); + if (fscanf(strm, "%s", temp) != 1) { /* Dimension or end paren */ + (void) HDfprintf(stderr, err6b, infile); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump STORAGE_LAYOUT CHUNKED %s found\n", temp); +#endif + if(!HDstrcmp(")", temp)) { /* end paren */ + in->configOptionVector[RANK] = 1; + get_next_dim = 0; + } + else { /* Dimension */ + icount++; + if (icount > MAX_NUM_DIMENSION) { + (void) HDfprintf(stderr, "Invalid value for rank.\n"); + goto error; + } + } + } /* while (get_next_dim) */ +#ifdef H5DEBUGIMPORT + printf("h5dump STORAGE_LAYOUT CHUNKED dims:", in->rank); + for (pndx = 0; pndx < in->rank; pndx++) { + printf(" %d", in->sizeOfChunk[pndx]); + } + printf("\n"); +#endif + in->configOptionVector[DIM] = 1; + } /* if(!HDstrcmp("(", key)) start paren */ + else { + (void) HDfprintf(stderr, err5b, infile); + goto error; + } + if (fscanf(strm, "%s", temp) != 1) { /* SIZE */ + (void) HDfprintf(stderr, err6b, infile); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump STORAGE_LAYOUT CHUNKED %s found\n", temp); +#endif + if(!HDstrcmp("SIZE", temp)) { /* SIZE */ + if (fscanf(strm, "%d", (&ival)) != 1) { + (void) HDfprintf(stderr, "%s", err19); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump STORAGE_LAYOUT CHUNKED SIZE %d found\n", ival); +#endif + } + while (HDstrcmp("}", temp)) { + if (fscanf(strm, "%s", temp) != 1) { /* end bracket */ + (void) HDfprintf(stderr, "%s", err18); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump STORAGE_LAYOUT CHUNKED %s found\n", temp); +#endif + } + in->configOptionVector[CHUNK] = 1; + } /* if(!HDstrcmp("CHUNKED", key)) CHUNKED */ + } /* else if(!HDstrcmp("STORAGE_LAYOUT", key)) CHUNKED-DIMENSION-SIZES */ + else if(!HDstrcmp("FILTERS", key)) { /* FILTERS */ +#ifdef H5DEBUGIMPORT + printf("h5dump FILTERS key\n"); +#endif + if (fscanf(strm, "%s", temp) != 1) { /* start bracket */ + (void) HDfprintf(stderr, err6b, infile); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump FILTERS %s found\n", temp); +#endif + if (fscanf(strm, "%s", temp) != 1) { + (void) HDfprintf(stderr, err6b, infile); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump FILTERS %s found\n", temp); +#endif + if(!HDstrcmp("COMPRESSION", temp)) { /* COMPRESSION */ +#ifdef H5DEBUGIMPORT + printf("h5dump FILTERS COMPRESSION found\n"); +#endif + if (fscanf(strm, "%s", temp) != 1) { /* DEFLATE */ + (void) HDfprintf(stderr, "%s", err18); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump FILTERS COMPRESSION %s found\n", temp); +#endif + if (fscanf(strm, "%s", temp) != 1) { /* bgin bracket */ + (void) HDfprintf(stderr, "%s", err18); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump FILTERS COMPRESSION %s found\n", temp); +#endif + if (fscanf(strm, "%s", temp) != 1) { /* LEVEL */ + (void) HDfprintf(stderr, "%s", err18); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump FILTERS COMPRESSION %s found\n", temp); +#endif + if (fscanf(strm, "%d", (&ival)) != 1) { + (void) HDfprintf(stderr, "%s", err19); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump FILTERS COMPRESSION LEVEL %d found\n", ival); +#endif + in->compressionParam = ival; + if (fscanf(strm, "%s", temp) != 1) { /* end bracket */ + (void) HDfprintf(stderr, "%s", err18); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump FILTERS COMPRESSION %s found\n", temp); +#endif + in->compressionType = 0; /* ONLY GZIP supported */ + in->configOptionVector[COMPRESS] = 1; + } + else if(!HDstrcmp("CONTIGUOUS", temp)) { /* CONTIGUOUS */ +#ifdef H5DEBUGIMPORT + printf("h5dump FILTERS CONTIGUOUS found\n"); +#endif + in->configOptionVector[COMPRESS] = 0; + } + else if(!HDstrcmp("NONE", temp)) { /* NONE */ +#ifdef H5DEBUGIMPORT + printf("h5dump FILTERS NONE found\n"); +#endif + in->configOptionVector[COMPRESS] = 0; + } + if (fscanf(strm, "%s", temp) != 1) { /* end bracket */ + (void) HDfprintf(stderr, "%s", err18); + goto error; + } +#ifdef H5DEBUGIMPORT + printf("h5dump FILTERS %s found\n", temp); +#endif + } + else if(!HDstrcmp("DATA", key)) { /* FINSHED */ +#ifdef H5DEBUGIMPORT + printf("h5dump DATA key\n"); +#endif + scanret = 0; + break; + } + scanret = fscanf(strm, "%s", key); + } +#ifdef H5DEBUGIMPORT + printf("h5dump path"); + for (pndx = 0; pndx < in->path.count; pndx++) { + printf(" : %s", in->path.group[pndx]); + } + printf("\n"); + printf("h5dump inputClass=%d\n", in->inputClass); + printf("h5dump inputSize=%d\n", in->inputSize); + printf("h5dump rank=%d\n", in->rank); + printf("h5dump outputClass=%d\n", in->outputClass); + printf("h5dump outputSize=%d\n", in->outputSize); + printf("h5dump outputArchitecture=%d\n", in->outputArchitecture); + printf("h5dump outputByteOrder=%d\n", in->outputByteOrder); + printf("h5dump compressionType=%d\n", in->compressionType); + printf("h5dump compressionParam=%d\n", in->compressionParam); + printf("h5dump externFilename=%s\n", in->externFilename); + printf("h5dump configOptionVector:\n"); + for (pndx = 0; pndx < NUM_KEYS; pndx++) { + printf(" %s=%d\n", keytable[pndx], in->configOptionVector[pndx]); + } +#endif + } + else { + while (scanret == 1) { + if ((kindex = mapKeywordToIndex(key)) == -1) { + (void) HDfprintf(stderr, err2, infile); + goto error; + } + switch (kindex) { + case 0: /* PATH */ + if (in->configOptionVector[PATH] == 1) { + (void) HDfprintf(stderr, err3a, infile); + goto error; + } + if (fscanf(strm, "%s", temp) != 1) { + (void) HDfprintf(stderr, "%s", err18); + goto error; + } + if (parsePathInfo(&in->path, temp) == -1) { + (void) HDfprintf(stderr, err3b, infile); + goto error; + } + in->configOptionVector[PATH] = 1; + break; + + case 1: /* INPUT-CLASS */ + if (in->configOptionVector[INPUT_CLASS] == 1) { + (void) HDfprintf(stderr, err4a, infile); + goto error; + } + + if (fscanf(strm, "%s", temp) != 1) { + (void) HDfprintf(stderr, "%s", err18); + goto error; + } + if (getInputClass(in, temp) == -1) { + (void) HDfprintf(stderr, err4b, infile); + goto error; + } + + in->configOptionVector[INPUT_CLASS] = 1; + + /*set default value for output-class */ + if (in->configOptionVector[OUTPUT_CLASS] == 0) { + if (in->inputClass == 0 || in->inputClass == 4) + in->outputClass = 0; + if (in->inputClass == 1 || in->inputClass == 2 + || in->inputClass == 3) + in->outputClass = 1; + if (in->inputClass == 6 || in->inputClass == 7) + in->outputClass = 2; + } + break; + + case 2: /* INPUT-SIZE */ + if (in->configOptionVector[INPUT_SIZE] == 1) { + (void) HDfprintf(stderr, err5a, infile); + goto error; + } + if (fscanf(strm, "%d", (&ival)) != 1) { + (void) HDfprintf(stderr, "%s", err19); + goto error; + } + if (getInputSize(in, ival) == -1) { + (void) HDfprintf(stderr, err5b, infile); + goto error; + } + in->configOptionVector[INPUT_SIZE] = 1; + + /*set default value for output-size */ + if (in->configOptionVector[OUTPUT_SIZE] == 0) + in->outputSize = in->inputSize; + break; + + case 3: /* RANK */ + if (in->configOptionVector[RANK] == 1) { + (void) HDfprintf(stderr, err6a, infile); + goto error; + } + + if (getRank(in, strm) == -1) { + (void) HDfprintf(stderr, err6b, infile); + goto error; + } + in->configOptionVector[RANK] = 1; + break; + + case 4: /* DIMENSION-SIZES */ + if (in->configOptionVector[DIM] == 1) { + (void) HDfprintf(stderr, err7a, infile); + goto error; + } + + if (in->configOptionVector[RANK] == 0) { + (void) HDfprintf(stderr, err7b, infile); + goto error; + } + if (getDimensionSizes(in, strm) == -1) { + (void) HDfprintf(stderr, err7c, infile); + goto error; + } + in->configOptionVector[DIM] = 1; + break; + + case 5: /* OUTPUT-CLASS */ + if (in->configOptionVector[OUTPUT_CLASS] == 1) { + (void) HDfprintf(stderr, err8a, infile); + goto error; + } + + if (getOutputClass(in, strm) == -1) { + (void) HDfprintf(stderr, err8b, infile); + goto error; + } + in->configOptionVector[OUTPUT_CLASS] = 1; + break; + + case 6: /* OUTPUT-SIZE */ + if (in->configOptionVector[OUTPUT_SIZE] == 1) { + (void) HDfprintf(stderr, err9a, infile); + goto error; + } + + if (getOutputSize(in, strm) == -1) { + (void) HDfprintf(stderr, err9b, infile); + goto error; + } + in->configOptionVector[OUTPUT_SIZE] = 1; + break; + + case 7: /* OUTPUT-ARCHITECTURE */ + if (in->configOptionVector[OUTPUT_ARCH] == 1) { + (void) HDfprintf(stderr, err10a, infile); + goto error; + } + + if (getOutputArchitecture(in, strm) == -1) { + (void) HDfprintf(stderr, err10b, infile); + goto error; + } + in->configOptionVector[OUTPUT_ARCH] = 1; + break; + + case 8: /* OUTPUT-BYTE-ORDER */ + if (in->configOptionVector[OUTPUT_B_ORDER] == 1) { + (void) HDfprintf(stderr, err11a, infile); + goto error; + } + + if (getOutputByteOrder(in, strm) == -1) { + (void) HDfprintf(stderr, err11b, infile); + goto error; + } + in->configOptionVector[OUTPUT_B_ORDER] = 1; + break; + + case 9: /* CHUNKED-DIMENSION-SIZES */ + if (in->configOptionVector[CHUNK] == 1) { + (void) HDfprintf(stderr, err12a, infile); + goto error; + } + /* cant appear before dimension sizes have been provided */ + if (in->configOptionVector[DIM] == 0) { + (void) HDfprintf(stderr, err12b, infile); + goto error; + } + + if (getChunkedDimensionSizes(in, strm) == -1) { + (void) HDfprintf(stderr, err12c, infile); + goto error; + } + in->configOptionVector[CHUNK] = 1; + break; + + case 10: /* COMPRESSION-TYPE */ + if (in->configOptionVector[COMPRESS] == 1) { + (void) HDfprintf(stderr, err13a, infile); + goto error; + } + + if (getCompressionType(in, strm) == -1) { + (void) HDfprintf(stderr, err13b, infile); + goto error; + } + in->configOptionVector[COMPRESS] = 1; + + if (in->configOptionVector[COMPRESS_PARAM] == 0) { + if (in->compressionType == 0) + in->compressionParam = 6; /* default value if compressionType is GZIP */ + } + break; + + case 11: /* COMPRESSION-PARAM */ + if (in->configOptionVector[COMPRESS_PARAM] == 1) { + (void) HDfprintf(stderr, err14a, infile); + goto error; + } + + if (getCompressionParameter(in, strm) == -1) { + (void) HDfprintf(stderr, err14b, infile); + goto error; + } + + in->configOptionVector[COMPRESS_PARAM] = 1; + + if (in->configOptionVector[COMPRESS] == 0) + in->compressionType = 0; + + break; + + case 12: /* EXTERNAL-STORAGE */ + if (in->configOptionVector[EXTERNALSTORE] == 1) { + (void) HDfprintf(stderr, err15a, infile); + goto error; + } + + if (getExternalFilename(in, strm) == -1) { + (void) HDfprintf(stderr, err15b, infile); + goto error; + } + in->configOptionVector[EXTERNALSTORE] = 1; + break; + + case 13: /* MAXIMUM-DIMENSIONS */ + if (in->configOptionVector[EXTEND] == 1) { + (void) HDfprintf(stderr, err16a, infile); + goto error; + } + /* cant appear before dimension sizes have been provided */ + if (in->configOptionVector[DIM] == 0) { + (void) HDfprintf(stderr, err16b, infile); + goto error; + } + if (getMaximumDimensionSizes(in, strm) == -1) { + (void) HDfprintf(stderr, err16c, infile); + goto error; + } + in->configOptionVector[EXTEND] = 1; + break; + + default: + break; + } + scanret = fscanf(strm, "%s", key); + } + } + + /* + check if keywords obtained are valid + if yes, return 0 else error + */ + + if (validateConfigurationParameters(in) == -1) { + (void) HDfprintf(stderr, err17, infile); + goto error; + } + + /* Set success return value */ + retval = 0; + +error: + if(strm) + HDfclose(strm); + return(retval); +} + +static int validateConfigurationParameters(struct Input *in) +{ + const char *err1 = "One or more of the required fields (RANK, DIMENSION-SIZES) missing.\n"; + const char *err2 = "Cannot specify chunking or compression or extendible data sets with the external file option.\n"; + const char *err3 = "Cannot specify the compression or the extendible data sets without the chunking option.\n"; + const char *err4a = "OUTPUT-ARCHITECTURE cannot be STD if OUTPUT-CLASS is floating point (FP).\n"; + const char *err4b = "OUTPUT-ARCHITECTURE cannot be IEEE if OUTPUT-CLASS is integer (IN).\n"; + const char *err5 = "For OUTPUT-CLASS FP, valid values for OUTPUT-SIZE are (32, 64) .\n"; +#ifndef H5_SIZEOF_LONG_LONG + const char *err6 = "No support for reading 64-bit integer (INPUT-CLASS: IN, TEXTIN, UIN, TEXTUIN files\n"; +#endif + + /* for class STR other parameters are ignored */ + if (in->inputClass == 5) /* STR */ + return (0); + + if ((in->configOptionVector[DIM] != 1) || (in->configOptionVector[RANK] != 1)) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + + if (in->configOptionVector[EXTERNALSTORE] == 1) { + if ((in->configOptionVector[COMPRESS] == 1) || (in->configOptionVector[CHUNK] == 1) || (in->configOptionVector[EXTEND] == 1)) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + } + + if ((in->configOptionVector[COMPRESS] == 1) || (in->configOptionVector[EXTEND] == 1)) { + if (in->configOptionVector[CHUNK] != 1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + } + + /* Arch cant be STD if O/p class is FP */ + if (in->outputArchitecture == 1) + if (in->outputClass == 1) { + (void) HDfprintf(stderr, "%s", err4a); + return (-1); + } + + /* Arch cant be IEEE if O/p class is IN */ + if (in->outputArchitecture == 2) + if (in->outputClass == 0) { + (void) HDfprintf(stderr, "%s", err4b); + return (-1); + } + + if (in->outputClass == 1) + if (in->outputSize != 32 && in->outputSize != 64) { + (void) HDfprintf(stderr, "%s", err5); + return (-1); + } + +#ifndef H5_SIZEOF_LONG_LONG + if (in->inputSize == 64 && (in->inputClass == 0 || in->inputClass == 4 || in->inputClass == 6 || in->inputClass == 7) ) { + (void) HDfprintf(stderr, "%s", err6); + return -1; + } +#endif + return (0); +} + +static int mapKeywordToIndex(char *key) +{ + int i; + + for (i = 0; i < NUM_KEYS; i++) + if (!HDstrcmp(keytable[i], key)) + return i; + return -1; +} + +static int parsePathInfo(struct path_info *path, char *temp) +{ + const char delimiter[] = "/\""; + char *token; + int i = 0; + const char *err1 = "Path string larger than MAX_PATH_NAME_LENGTH.\n"; + + token = HDstrtok (temp, delimiter); + if (HDstrlen(token) >= MAX_PATH_NAME_LENGTH) { + (void) HDfprintf(stderr, err1); + return (-1); + } + HDstrcpy(path->group[i++],token); + + while (1) { + token = HDstrtok (NULL, delimiter); + if (token == NULL) + break; + if (HDstrlen(token) >= MAX_PATH_NAME_LENGTH) { + (void) HDfprintf(stderr, err1); + return (-1); + } + HDstrcpy(path->group[i++],token); + } + path->count = i; + return (0); +} + +static int parseDimensions(struct Input *in, char *strm) +{ + const char delimiter[] = ","; + char temp[255]; + char *token; + int i = 0; + const char *err1 = "Unable to allocate dynamic memory.\n"; + + HDstrncpy(temp, strm, sizeof(temp)); + temp[sizeof(temp) - 1] = '\0'; + HDstrtok (temp, delimiter); + + while (1) { + token = HDstrtok (NULL, delimiter); + if (token == NULL) + break; + i++; + } + in->rank = i + 1; + if ((in->sizeOfDimension = (hsize_t *) HDmalloc ((size_t) in->rank * sizeof(hsize_t))) == NULL) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + + i = 0; + HDstrncpy(temp, strm, sizeof(temp)); + temp[sizeof(temp) - 1] = '\0'; + in->sizeOfDimension[i++] + = HDstrtoull(HDstrtok (temp, delimiter), NULL, BASE_10); + + while (1) { + token = HDstrtok (NULL, delimiter); + if (token == NULL) + break; + in->sizeOfDimension[i++] = HDstrtoull(token, NULL, BASE_10); + } + return (0); +} + +static int getOutputClass(struct Input *in, FILE *strm) +{ + char temp[255]; + int kindex; + const char *err1 = "Unable to get 'string' value.\n"; + const char *err2 = "Invalid value for output class.\n"; + + if (fscanf(strm, "%s", temp) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + + if ((kindex = OutputClassStrToInt(temp)) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + + in->outputClass = kindex; + return (0); +} + +static int OutputClassStrToInt(char *temp) +{ + int i; + char classKeywordTable[3][15] = { "IN", "FP", "UIN" }; + for (i = 0; i < 3; i++) + if (!HDstrcmp(classKeywordTable[i], temp)) + return i; + + return -1; +} +/* same as getInputSize. But defined separately for extensibility */ +static int getOutputSize(struct Input *in, FILE *strm) +{ + int ival; + int i; + int outputSizeValidValues[4] = { 8, 16, 32, 64 }; + const char *err1 = "Unable to get integer value.\n"; + const char *err2 = "Invalid value for output size.\n"; + + if (fscanf(strm, "%d", (&ival)) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + + for (i = 0; i < 4; i++) + if (outputSizeValidValues[i] == ival) { + in->outputSize = ival; + return (0); + } + (void) HDfprintf(stderr, "%s", err2); + return (-1); +} + +static int getInputClass(struct Input *in, char * temp) +{ + int kindex; + const char *err1 = "Invalid value for input class.\n"; + + if ((kindex = InputClassStrToInt(temp)) == -1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + + in->inputClass = kindex; + return (0); +} + +static int getInputClassType(struct Input *in, char * buffer) +{ + int kindex = -1; + const char *err1 = "Invalid value for input class.\n"; + const char *err2 = "Invalid value for output architecture.\n"; + const char *err3 = "Invalid value for output byte-order.\n"; + + if (!HDstrcmp(buffer, "H5T_STD_I8BE")) { + in->inputSize = 8; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("BE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = 4; + } + else if (!HDstrcmp(buffer, "H5T_STD_I8LE")) { + in->inputSize = 8; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("LE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = 4; + } + else if (!HDstrcmp(buffer, "H5T_STD_I16BE")) { + in->inputSize = 16; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("BE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = 4; + } + else if (!HDstrcmp(buffer, "H5T_STD_I16LE")) { + in->inputSize = 16; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("LE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = 4; + } + else if (!HDstrcmp(buffer, "H5T_STD_I32BE")) { + in->inputSize = 32; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("BE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = 4; + } + else if (!HDstrcmp(buffer, "H5T_STD_I32LE")) { + in->inputSize = 32; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("LE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = 4; + } + else if (!HDstrcmp(buffer, "H5T_STD_I64BE")) { + in->inputSize = 64; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("BE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = 4; + } + else if (!HDstrcmp(buffer, "H5T_STD_I64LE")) { + in->inputSize = 64; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("LE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = 4; + } + else if (!HDstrcmp(buffer, "H5T_STD_U8BE")) { + in->inputSize = 8; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("BE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = 7; + } + else if (!HDstrcmp(buffer, "H5T_STD_U8LE")) { + in->inputSize = 8; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("LE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = 7; + } + else if (!HDstrcmp(buffer, "H5T_STD_U16BE")) { + in->inputSize = 16; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("BE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = 7; + } + else if (!HDstrcmp(buffer, "H5T_STD_U16LE")) { + in->inputSize = 16; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("LE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = 7; + } + else if (!HDstrcmp(buffer, "H5T_STD_U32BE")) { + in->inputSize = 32; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("BE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = 7; + } + else if (!HDstrcmp(buffer, "H5T_STD_U32LE")) { + in->inputSize = 32; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("LE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = 7; + } + else if (!HDstrcmp(buffer, "H5T_STD_U64BE")) { + in->inputSize = 64; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("BE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = 7; + } + else if (!HDstrcmp(buffer, "H5T_STD_U64LE")) { + in->inputSize = 64; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("LE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = 7; + } + else if (!HDstrcmp(buffer, "H5T_NATIVE_SCHAR")) { + in->inputSize = 8; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("NATIVE")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + kindex = 4; + } + else if (!HDstrcmp(buffer, "H5T_NATIVE_UCHAR")) { + in->inputSize = 8; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("NATIVE")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + kindex = 7; + } + else if (!HDstrcmp(buffer, "H5T_NATIVE_SHORT")) { + in->inputSize = 16; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("NATIVE")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + kindex = 4; + } + else if (!HDstrcmp(buffer, "H5T_NATIVE_USHORT")) { + in->inputSize = 16; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("NATIVE")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + kindex = 7; + } + else if (!HDstrcmp(buffer, "H5T_NATIVE_INT")) { + in->inputSize = 32; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("NATIVE")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + kindex = 4; + } + else if (!HDstrcmp(buffer, "H5T_NATIVE_UINT")) { + in->inputSize = 32; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("NATIVE")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + kindex = 7; + } + else if (!HDstrcmp(buffer, "H5T_NATIVE_LONG")) { + in->inputSize = 32; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("NATIVE")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + kindex = 4; + } + else if (!HDstrcmp(buffer, "H5T_NATIVE_ULONG")) { + in->inputSize = 32; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("NATIVE")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + kindex = 7; + } + else if (!HDstrcmp(buffer, "H5T_NATIVE_LLONG")) { + in->inputSize = 64; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("NATIVE")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + kindex = 4; + } + else if (!HDstrcmp(buffer, "H5T_NATIVE_ULLONG")) { + in->inputSize = 64; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("NATIVE")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + kindex = 7; + } + else if (!HDstrcmp(buffer, "H5T_IEEE_F32BE")) { + in->inputSize = 32; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("IEEE")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("BE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = 3; + } + else if (!HDstrcmp(buffer, "H5T_IEEE_F32LE")) { + in->inputSize = 32; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("IEEE")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("LE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = 3; + } + else if (!HDstrcmp(buffer, "H5T_IEEE_F64BE")) { + in->inputSize = 64; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("IEEE")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("BE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = 3; + } + else if (!HDstrcmp(buffer, "H5T_IEEE_F64LE")) { + in->inputSize = 64; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("IEEE")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("LE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = 3; + } + else if (!HDstrcmp(buffer, "H5T_VAX_F32")) { + in->inputSize = 32; + in->configOptionVector[INPUT_SIZE] = 1; + + kindex = 3; + } + else if (!HDstrcmp(buffer, "H5T_VAX_F64")) { + in->inputSize = 64; + in->configOptionVector[INPUT_SIZE] = 1; + + kindex = 3; + } + else if (!HDstrcmp(buffer, "H5T_NATIVE_FLOAT")) { + in->inputSize = 32; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("NATIVE")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + kindex = 3; + } + else if (!HDstrcmp(buffer, "H5T_NATIVE_DOUBLE")) { + in->inputSize = 64; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("NATIVE")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + kindex = 3; + } +#if H5_SIZEOF_LONG_DOUBLE !=0 + else if (!HDstrcmp(buffer, "H5T_NATIVE_LDOUBLE")) { + in->inputSize = H5_SIZEOF_LONG_DOUBLE; + in->configOptionVector[INPUT_SIZE] = 1; + + if ((kindex = OutputArchStrToInt("NATIVE")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + kindex = 3; + } +#endif + else if(!HDstrcmp(buffer, "H5T_TIME: not yet implemented")) { + kindex = -1; + } + else if(!HDstrcmp(buffer, "H5T_STRING")) { + kindex = 5; + } + /* case H5T_BITFIELD: */ + else if (!HDstrcmp(buffer, "H5T_STD_B8BE")) { + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("BE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = -1; + } + else if (!HDstrcmp(buffer, "H5T_STD_B8LE")) { + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("LE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = -1; + } + else if (!HDstrcmp(buffer, "H5T_STD_B16BE")) { + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("BE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = -1; + } + else if (!HDstrcmp(buffer, "H5T_STD_B16LE")) { + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("LE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = -1; + } + else if (!HDstrcmp(buffer, "H5T_STD_B32BE")) { + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("BE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = -1; + } + else if (!HDstrcmp(buffer, "H5T_STD_B32LE")) { + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("LE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = -1; + } + else if (!HDstrcmp(buffer, "H5T_STD_B64BE")) { + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("BE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = -1; + } + else if (!HDstrcmp(buffer, "H5T_STD_B64LE")) { + + if ((kindex = OutputArchStrToInt("STD")) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->outputArchitecture = kindex; + + if ((kindex = OutputByteOrderStrToInt("LE")) == -1) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + in->outputByteOrder = kindex; + + kindex = -1; + } + /* case H5T_OPAQUE: */ + else if(!HDstrcmp(buffer, "H5T_OPAQUE")) { + kindex = -1; + } + /* case H5T_COMPOUND: */ + else if(!HDstrcmp(buffer, "H5T_COMPOUND")) { + kindex = -1; + } + /* case H5T_REFERENCE: */ + else if(!HDstrcmp(buffer, "H5T_REFERENCE")) { + kindex = -1; + } + /* case H5T_ENUM: */ + else if(!HDstrcmp(buffer, "H5T_ENUM")) { + kindex = -1; + } + /* case H5T_VLEN: */ + else if(!HDstrcmp(buffer, "H5T_VLEN")) { + kindex = -1; + } + /* case H5T_ARRAY: */ + else if(!HDstrcmp(buffer, "H5T_ARRAY")) { + kindex = -1; + } + + if (kindex == -1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + + /*set default value for output-size */ + if (in->configOptionVector[OUTPUT_SIZE] == 0) + in->outputSize = in->inputSize; +#ifdef H5DEBUGIMPORT + printf("h5dump DATATYPE STRING %d inputSize\n", in->inputSize); + printf("h5dump DATATYPE STRING %d outputSize\n", in->outputSize); +#endif + + in->inputClass = kindex; + return (0); +} + +static int InputClassStrToInt(char *temp) +{ + int i; + char classKeywordTable[8][15] = { "TEXTIN", "TEXTFP", "TEXTFPE", "FP", "IN", "STR", "TEXTUIN", "UIN" }; + for (i = 0; i < 8; i++) + if (!HDstrcmp(classKeywordTable[i], temp)) + return i; + return -1; +} + +/* same as getOutputSize. But defined separately for extensibility */ +static int getInputSize(struct Input *in, int ival) +{ + int i; + int inputSizeValidValues[4] = { 8, 16, 32, 64 }; + const char *err1 = "Invalid value for input size.\n"; + + for (i = 0; i < 4; i++) + if (inputSizeValidValues[i] == ival) { + in->inputSize = ival; + return (0); + } + (void) HDfprintf(stderr, "%s", err1); + return (-1); +} + +static int getRank(struct Input *in, FILE *strm) +{ + int ival; + + const char *err1 = "Unable to get integer value.\n"; + const char *err2 = "Invalid value for rank.\n"; + + if (fscanf(strm, "%d", (&ival)) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + if (ival >= MIN_NUM_DIMENSION && ival <= MAX_NUM_DIMENSION) { + in->rank = ival; + return (0); + } + + (void) HDfprintf(stderr, "%s", err2); + return (-1); +} + +/* same as getChunkedDimensionSizes. But defined separately for extensibility */ +static int getDimensionSizes(struct Input *in, FILE *strm) +{ + unsigned long long ullval; + int i = 0; + + const char *err1 = "Unable to allocate dynamic memory.\n"; + const char *err2 = "No. of dimensions for which dimension sizes provided is not equal to provided rank.\n"; + + if ((in->sizeOfDimension = (hsize_t *) HDmalloc ((size_t) in->rank * sizeof(hsize_t))) == NULL) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + + while (fscanf(strm, "%llu", (&ullval)) == 1) + in->sizeOfDimension[i++] = ullval; + + if (in->rank != i) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + return (0); +} +/* same as getDimensionSizes. But defined separately for extensibility */ +static int getChunkedDimensionSizes(struct Input *in, FILE *strm) +{ + unsigned long long ullval; + int i = 0; + + const char *err1 = "Unable to allocate dynamic memory.\n"; + const char *err2 = "No. of dimensions for which chunked dimension sizes provided is not equal to provided rank.\n"; + const char *err3 = "The CHUNKED-DIMENSION-SIZES cannot exceed the sizes of DIMENSION-SIZES\n"; + + if ((in->sizeOfChunk = (hsize_t *) HDmalloc ((size_t) in->rank * sizeof(hsize_t))) == NULL) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + + while (fscanf(strm, "%llu", (&ullval)) == 1) + in->sizeOfChunk[i++] = ullval; + + if (in->rank != i) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + + for (i = 0; i < in->rank; i++) + if (in->sizeOfChunk[i] > in->sizeOfDimension[i]) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + return (0); +} + +static int getMaximumDimensionSizes(struct Input *in, FILE *strm) +{ + long long llval; + int i = 0; + + const char *err1 = "Unable to allocate dynamic memory.\n"; + const char *err2 = "No. of dimensions for which maximum dimension sizes provided is not equal to provided rank.\n"; + const char *err3 = "The MAXIMUM-DIMENSIONS cannot be less than the sizes of DIMENSION-SIZES. Exception: can be -1 to indicate unlimited size\n"; + + if ((in->maxsizeOfDimension = (hsize_t *) HDmalloc ((size_t) in->rank * sizeof(hsize_t))) == NULL) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + + while (fscanf(strm, "%lld", (&llval)) == 1) { + if (llval == -1) + in->maxsizeOfDimension[i++] = H5S_UNLIMITED; + else + in->maxsizeOfDimension[i++] = (hsize_t)llval; + } + + if (in->rank != i) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + + for (i = 0; i < in->rank; i++) { + if (in->maxsizeOfDimension[i] != H5S_UNLIMITED) + if (in->maxsizeOfDimension[i] < in->sizeOfDimension[i]) { + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + } + return (0); +} + +static int getOutputArchitecture(struct Input *in, FILE *strm) +{ + char temp[255]; + int kindex; + const char *err1 = "Unable to get 'string' value.\n"; + const char *err2 = "Invalid value for output architecture.\n"; + + if (fscanf(strm, "%s", temp) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + + if ((kindex = OutputArchStrToInt(temp)) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + + in->outputArchitecture = kindex; + return (0); +} + +static int OutputArchStrToInt(const char *temp) +{ + int i; + char outputArchKeywordTable[8][15] = { "NATIVE", "STD", "IEEE", "INTEL", + "CRAY", "MIPS", "ALPHA", "UNIX" }; + for (i = 0; i < 8; i++) + if (!HDstrcmp(outputArchKeywordTable[i], temp)) + return i; + return -1; +} + +static int getOutputByteOrder(struct Input *in, FILE *strm) +{ + char temp[255]; + int kindex; + const char *err1 = "Unable to get 'string' value.\n"; + const char *err2 = "Invalid value for output byte-order.\n"; + + if (fscanf(strm, "%s", temp) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + + if ((kindex = OutputByteOrderStrToInt(temp)) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + + in->outputByteOrder = kindex; + return (0); +} + +static int OutputByteOrderStrToInt(const char *temp) +{ + int i; + char outputByteOrderKeywordTable[2][15] = { "BE", "LE" }; + for (i = 0; i < 2; i++) + if (!HDstrcmp(outputByteOrderKeywordTable[i], temp)) + return i; + return -1; +} + +static int getCompressionType(struct Input *in, FILE *strm) +{ + char temp[255]; + int kindex; + const char *err1 = "Unable to get 'string' value.\n"; + const char *err2 = "Invalid value for compression.\n"; + + if (fscanf(strm, "%s", temp) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + + if ((kindex = CompressionTypeStrToInt(temp)) == -1) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + + in->compressionType = kindex; + return (0); + +} + +static int CompressionTypeStrToInt(char *temp) +{ + /* currently supports only GZIP */ + /* can be extended by adding fields to the table */ + + int i; + char CompressionTypeKeywordTable[1][15] = { "GZIP" }; + for (i = 0; i < 1; i++) + if (!HDstrcmp(CompressionTypeKeywordTable[i], temp)) + return i; + return -1; +} + +static int getCompressionParameter(struct Input *in, FILE *strm) +{ + /* currently supports only GZIP */ + /* can be extended by adding more values to COMPRESSION-TYPE and */ + /* handling the paramters here by adding more cases */ + + int ival; + const char *err1 = "Unable to get integer value.\n"; + const char *err2 = "Invalid value for compression paramter.\n"; + const char *err3 = "Unsupported Compression Type.\n"; + + switch (in->compressionType) { + case 0: /* GZIP */ + if (fscanf(strm, "%d", (&ival)) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + + if (ival < 0 || ival > 9) { + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + in->compressionParam = ival; + return (0); + + default: + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } +} + +static int getExternalFilename(struct Input *in, FILE *strm) +{ + char temp[255]; + const char *err1 = "Unable to get 'string' value.\n"; + + if (fscanf(strm, "%s", temp) != 1) { + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + + in->externFilename = (char *) HDmalloc ((size_t) (HDstrlen(temp)) * sizeof(char)); + (void) HDstrcpy(in->externFilename, temp); + return (0); +} + +void setDefaultValues(struct Input *in, int count) +{ + int i; + char temp[255]; + char num[255]; + + in->h5dumpInput = 0; + in->inputClass = 3; /* FP */ + in->inputSize = 32; + in->outputClass = 1; /* FP */ + in->outputSize = 32; + in->rank = 0; + in->path.count = 1; + + HDstrcpy(temp, "dataset"); + sprintf(num, "%d", count); + HDstrcat(temp, num); + HDstrcpy(in->path.group[0], temp); + + in->outputArchitecture = 0; /* NATIVE */ + in->outputByteOrder = -1; /* use default */ + in->compressionType = 0; /* GZIP */ + for (i = 0; i < NUM_KEYS; i++) + in->configOptionVector[i] = 0; +} + +hid_t createOutputDataType(struct Input *in) +{ + hid_t new_type = (-1); + const char *err1 = "Invalid value for output class.\n"; + const char *err2 = "Invalid value for output size.\n"; + const char *err3 = "Invalid value for output byte order.\n"; + const char *err4 = "Invalid value for output architecture.\n"; + const char *err5 = "STD not supported for float.\n"; + const char *err6 = "IEEE not supported for INT.\n"; + + switch (in->outputClass) { + case 0: + switch (in->outputArchitecture) { + case 0: /* NATIVE */ + switch (in->outputSize) { + case 8: + new_type = H5Tcopy(H5T_NATIVE_CHAR); + break; + + case 16: + new_type = H5Tcopy(H5T_NATIVE_SHORT); + break; + + case 32: + new_type = H5Tcopy(H5T_NATIVE_INT); + break; + + case 64: + new_type = H5Tcopy(H5T_NATIVE_LLONG); + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + switch (in->outputByteOrder) { + case -1: /* default */ + break; + case 0: + H5Tset_order(new_type, H5T_ORDER_BE); + break; + + case 1: + H5Tset_order(new_type, H5T_ORDER_LE); + break; + + default: + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + break; + + case 1: /* STD */ + switch (in->outputSize) { + case 8: + switch (in->outputByteOrder) { + case -1: + case 0: + new_type = H5Tcopy(H5T_STD_I8BE); + break; + + case 1: + new_type = H5Tcopy(H5T_STD_I8LE); + break; + + default: + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + break; + + case 16: + switch (in->outputByteOrder) { + case -1: + case 0: + new_type = H5Tcopy(H5T_STD_I16BE); + break; + + case 1: + new_type = H5Tcopy(H5T_STD_I16LE); + break; + + default: + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + break; + + case 32: + switch (in->outputByteOrder) { + case -1: + case 0: + new_type = H5Tcopy(H5T_STD_I32BE); + break; + + case 1: + new_type = H5Tcopy(H5T_STD_I32LE); + break; + + default: + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + break; + + case 64: + switch (in->outputByteOrder) { + case -1: + case 0: + new_type = H5Tcopy(H5T_STD_I64BE); + break; + + case 1: + new_type = H5Tcopy(H5T_STD_I64LE); + break; + + default: + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + break; + + default: + (void) HDfprintf(stderr, "%s", err4); + return (-1); + } + break; + + case 1: + switch (in->outputArchitecture) { + case 0: + switch (in->outputSize) { + case 32: + new_type = H5Tcopy(H5T_NATIVE_FLOAT); + break; + + case 64: + new_type = H5Tcopy(H5T_NATIVE_DOUBLE); + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + switch (in->outputByteOrder) { + case -1: /* DEFAULT */ + break; + case 0: + H5Tset_order(new_type, H5T_ORDER_BE); + break; + + case 1: + H5Tset_order(new_type, H5T_ORDER_LE); + break; + + default: + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + break; + + case 1: + (void) HDfprintf(stderr, "%s", err5); + return (-1); + + case 2: + switch (in->outputSize) { + case 32: + switch (in->outputByteOrder) { + case -1: + case 0: + new_type = H5Tcopy(H5T_IEEE_F32BE); + break; + + case 1: + new_type = H5Tcopy(H5T_IEEE_F32LE); + break; + + default: + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + break; + + case 64: + switch (in->outputByteOrder) { + case -1: + case 0: + new_type = H5Tcopy(H5T_IEEE_F64BE); + break; + + case 1: + new_type = H5Tcopy(H5T_IEEE_F64LE); + break; + + default: + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + break; + + default: + (void) HDfprintf(stderr, "%s", err4); + return (-1); + } + break; + + case 2: + switch (in->outputArchitecture) { + case 0: + switch (in->outputSize) { + case 8: + new_type = H5Tcopy(H5T_NATIVE_UCHAR); + break; + + case 16: + new_type = H5Tcopy(H5T_NATIVE_USHORT); + break; + + case 32: + new_type = H5Tcopy(H5T_NATIVE_UINT); + break; + + case 64: + new_type = H5Tcopy(H5T_NATIVE_ULLONG); + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + switch (in->outputByteOrder) { + case -1: /* Default */ + break; + case 0: + H5Tset_order(new_type, H5T_ORDER_BE); + break; + + case 1: + H5Tset_order(new_type, H5T_ORDER_LE); + break; + + default: + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + break; + + case 1: + switch (in->outputSize) { + case 8: + switch (in->outputByteOrder) { + case -1: + case 0: + new_type = H5Tcopy(H5T_STD_U8BE); + break; + + case 1: + new_type = H5Tcopy(H5T_STD_U8LE); + break; + + default: + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + break; + + case 16: + switch (in->outputByteOrder) { + case -1: + case 0: + new_type = H5Tcopy(H5T_STD_U16BE); + break; + + case 1: + new_type = H5Tcopy(H5T_STD_U16LE); + break; + + default: + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + break; + + case 32: + switch (in->outputByteOrder) { + case -1: + case 0: + new_type = H5Tcopy(H5T_STD_U32BE); + break; + + case 1: + new_type = H5Tcopy(H5T_STD_U32LE); + break; + + default: + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + break; + + case 64: + switch (in->outputByteOrder) { + case -1: + case 0: + new_type = H5Tcopy(H5T_STD_U64BE); + break; + + case 1: + new_type = H5Tcopy(H5T_STD_U64LE); + break; + + default: + (void) HDfprintf(stderr, "%s", err3); + return (-1); + } + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + break; + + case 2: + (void) HDfprintf(stderr, "%s", err6); + return (-1); + + default: + (void) HDfprintf(stderr, "%s", err4); + return (-1); + } + break; + + default: + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + return new_type; +} + +hid_t createInputDataType(struct Input *in) +{ + hid_t new_type = (-1); + const char *err1 = "Invalid value for input class.\n"; + const char *err2 = "Invalid value for output size.\n"; + + switch (in->inputClass) { + case 0: + case 4: + switch (in->inputSize) { + case 8: + new_type = H5Tcopy(H5T_NATIVE_CHAR); + break; + + case 16: + new_type = H5Tcopy(H5T_NATIVE_SHORT); + break; + + case 32: + new_type = H5Tcopy(H5T_NATIVE_INT); + break; + + case 64: + new_type = H5Tcopy(H5T_NATIVE_LLONG); + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + break; + + case 1: + case 2: + case 3: + switch (in->inputSize) { + case 32: + new_type = H5Tcopy(H5T_NATIVE_FLOAT); + break; + + case 64: + new_type = H5Tcopy(H5T_NATIVE_DOUBLE); + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + break; + + case 5: + (void) HDfprintf(stderr, "%s", err1); + return (-1); + break; + + case 6: + case 7: + switch (in->inputSize) { + case 8: + new_type = H5Tcopy(H5T_NATIVE_UCHAR); + break; + + case 16: + new_type = H5Tcopy(H5T_NATIVE_USHORT); + break; + + case 32: + new_type = H5Tcopy(H5T_NATIVE_UINT); + break; + + case 64: + new_type = H5Tcopy(H5T_NATIVE_ULLONG); + break; + + default: + (void) HDfprintf(stderr, "%s", err2); + return (-1); + } + break; + + default: + (void) HDfprintf(stderr, "%s", err1); + return (-1); + } + return new_type; +} + +static int process(struct Options *opt) +{ + struct Input *in; + FILE *extfile; + hid_t file_id; + hid_t group_id; + hid_t handle; + hid_t dataset; + hid_t dataspace = (-1); + hid_t intype; + hid_t outtype; + hid_t proplist; + hsize_t numOfElements = 1; + int j; + int k; + + const char *err1 = "Error creating HDF output file: %s.\n"; + const char *err2 = "Error in processing the configuration file: %s.\n"; + const char *err3 = "Error in reading the input file: %s.\n"; + const char *err4 = "Error in creating or opening external file.\n"; + const char *err5 = "Error in creating the output data set. Dataset with the same name may exist at the specified path\n"; + const char *err6 = "Error in writing the output data set.\n"; + + H5E_BEGIN_TRY + { + if ((file_id = H5Fopen(opt->outfile, H5F_ACC_RDWR, H5P_DEFAULT)) < 0) { + if ((file_id = H5Fcreate(opt->outfile, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT)) == FAIL) { + (void) HDfprintf(stderr, err1, opt->outfile); + return (-1); + } + } + } + H5E_END_TRY; + + for (k = 0; k < opt->fcount; k++) { + in = &(opt->infiles[k].in); + if (opt->infiles[k].config == 1) { + if (processConfigurationFile(opt->infiles[k].configfile, in) == -1) { + (void) HDfprintf(stderr, err2, opt->infiles[k].configfile); + return (-1); + } + } + + if (processDataFile(opt->infiles[k].datafile, in, file_id) == -1) { + (void) HDfprintf(stderr, err3, opt->infiles[k].datafile); + return (-1); + } + + if (in->inputClass != 5) { /* STR */ + for (j = 0; j < in->rank; j++) + numOfElements *= in->sizeOfDimension[j]; + + /* disable error reporting */ + H5E_BEGIN_TRY + { + /* create parent groups */ + if (in->path.count > 1) { + j = 0; + handle = file_id; + while (j < in->path.count - 1) { + if ((group_id = H5Gopen2(handle, in->path.group[j], H5P_DEFAULT)) < 0) { + group_id = H5Gcreate2(handle, in->path.group[j++], H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + for (; j < in->path.count - 1; j++) + group_id = H5Gcreate2(group_id, in->path.group[j], H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + handle = group_id; + break; + } + handle = group_id; + j++; + } + } + else { + handle = file_id; + j = 0; + } + + /*enable error reporting */ + } + H5E_END_TRY; + + /*create data type */ + intype = createInputDataType(in); + outtype = createOutputDataType(in); +#ifdef H5DEBUGIMPORT + printf("process intype %d outtype %d\n", intype, outtype); +#endif + + /* create property list */ + proplist = H5Pcreate(H5P_DATASET_CREATE); + if (in->configOptionVector[CHUNK] == 1) { + H5Pset_layout(proplist, H5D_CHUNKED); + /* not reqd chunking is implied if set_chunk is used */ + H5Pset_chunk(proplist, in->rank, in->sizeOfChunk); + } + + if (in->configOptionVector[COMPRESS] == 1) { + H5Pset_deflate(proplist, (unsigned) in->compressionParam); + } + + if (in->configOptionVector[EXTERNALSTORE] == 1) { + /* creating the external file if it doesnt exist */ + if ((extfile = HDfopen(in->externFilename, "ab")) == NULL) { + (void) HDfprintf(stderr, "%s", err4); + H5Pclose(proplist); + H5Sclose(dataspace); + H5Fclose(file_id); + return (-1); + } + HDfclose(extfile); + H5Pset_external(proplist, in->externFilename, (off_t)0, numOfElements * (hsize_t)in->inputSize / 8); + } + + /* create dataspace */ + if (in->configOptionVector[EXTEND] == 1) + dataspace = H5Screate_simple(in->rank, in->sizeOfDimension, in->maxsizeOfDimension); + else + dataspace = H5Screate_simple(in->rank, in->sizeOfDimension, NULL); + + /* disable error reporting */ + H5E_BEGIN_TRY + { + /* create data set */ + if ((dataset = H5Dcreate2(handle, in->path.group[j], outtype, dataspace, H5P_DEFAULT, proplist, H5P_DEFAULT)) < 0) { + (void) HDfprintf(stderr, "%s", err5); + H5Pclose(proplist); + H5Sclose(dataspace); + H5Fclose(file_id); + return (-1); + } + + /*enable error reporting */ + } + H5E_END_TRY; + + /* write dataset */ + if (H5Dwrite(dataset, intype, H5S_ALL, H5S_ALL, H5P_DEFAULT, (VOIDP) in->data) < 0) { + (void) HDfprintf(stderr, "%s", err6); + H5Dclose(dataset); + H5Pclose(proplist); + H5Sclose(dataspace); + H5Fclose(file_id); + return (-1); + } + + H5Dclose(dataset); + H5Pclose(proplist); + H5Sclose(dataspace); + } + + } /* STR */ + + H5Fclose(file_id); + return (0); +} + +/* + * Name: + * help + * + * Purpose: + * Print a helpful summary of command usage and features. + */ + +void help(char *name) +{ + (void) HDfprintf(stdout, "Name:\n\n"); + (void) HDfprintf(stdout, "\t%s\n\n", name); + (void) HDfprintf(stdout, "\t TOOL NAME:\n"); + (void) HDfprintf(stdout, "\t %s\n", name); + (void) HDfprintf(stdout, "\t SYNTAX:\n"); + (void) HDfprintf(stdout, "\t %s -h[elp], OR\n", name); + (void) HDfprintf(stdout, + "\t %s <infile> -c[onfig] <configfile> [<infile> -c[config] <configfile>...]", name); + (void) HDfprintf(stdout, "\t\t\t\t -o[utfile] <outfile>\n\n"); + (void) HDfprintf(stdout, "\t PURPOSE:\n"); + (void) HDfprintf(stdout, + "\t To convert data stored in one or more ASCII or binary files\n"); + (void) HDfprintf(stdout, + "\t into one or more datasets (in accordance with the \n"); + (void) HDfprintf(stdout, + "\t user-specified type and storage properties) in an existing \n"); + (void) HDfprintf(stdout, "\t or new HDF5 file.\n\n"); + (void) HDfprintf(stdout, "\t DESCRIPTION:\n"); + (void) HDfprintf(stdout, + "\t The primary objective of the utility is to convert floating\n"); + (void) HDfprintf(stdout, + "\t point or integer data stored in ASCII text or binary form \n"); + (void) HDfprintf(stdout, + "\t into a data-set according to the type and storage properties\n"); + (void) HDfprintf(stdout, + "\t specified by the user. The utility can also accept ASCII\n"); + (void) HDfprintf(stdout, + "\t text files and store the contents in a compact form as an\n"); + (void) HDfprintf(stdout, "\t array of one-dimensional strings.\n\n"); + (void) HDfprintf(stdout, + "\t The input data to be written as a data-set can be provided\n"); + (void) HDfprintf(stdout, "\t to the utility in one of the following forms:\n"); + (void) HDfprintf(stdout, + "\t 1. ASCII text file with numeric data (floating point or \n"); + (void) HDfprintf(stdout, "\t integer data). \n"); + (void) HDfprintf(stdout, + "\t 2. Binary file with native floating point data (32-bit or \n"); + (void) HDfprintf(stdout, "\t 64-bit) \n"); + (void) HDfprintf(stdout, + "\t 3. Binary file with native integer (signed or unsigned)\n"); + (void) HDfprintf(stdout, "\t data (8-bit or 16-bit or 32-bit or 64-bit). \n"); + (void) HDfprintf(stdout, + "\t 4. ASCII text file containing strings (text data).\n"); + (void) HDfprintf(stdout, "\t \n"); + (void) HDfprintf(stdout, + "\t Every input file is associated with a configuration file \n"); + (void) HDfprintf(stdout, + "\t also provided as an input to the utility. (See Section \n"); + (void) HDfprintf(stdout, + "\t \"CONFIGURATION FILE\" to know how it is to be organized).\n"); + (void) HDfprintf(stdout, + "\t The class, size and dimensions of the input data is \n"); + (void) HDfprintf(stdout, + "\t specified in this configuration file. A point to note is\n"); + (void) HDfprintf(stdout, + "\t that the floating point data in the ASCII text file may be\n"); + (void) HDfprintf(stdout, + "\t organized in the fixed floating form (for example 323.56)\n"); + (void) HDfprintf(stdout, + "\t or in a scientific notation (for example 3.23E+02). A \n"); + (void) HDfprintf(stdout, + "\t different input-class specification is to be used for both\n"); + (void) HDfprintf(stdout, "\t forms.\n\n"); + (void) HDfprintf(stdout, + "\t The utility extracts the input data from the input file \n"); + (void) HDfprintf(stdout, + "\t according to the specified parameters and saves it into \n"); + (void) HDfprintf(stdout, "\t an H5 dataset. \n\n"); + (void) HDfprintf(stdout, + "\t The user can specify output type and storage properties in \n"); + (void) HDfprintf(stdout, + "\t the configuration file. The user is required to specify the \n"); + (void) HDfprintf(stdout, + "\t path of the dataset. If the groups in the path leading to \n"); + (void) HDfprintf(stdout, + "\t the data-set do not exist, the groups will be created by the\n"); + (void) HDfprintf(stdout, + "\t utility. If no group is specified, the dataset will be\n"); + (void) HDfprintf(stdout, "\t created under the root group.\n\n"); + (void) HDfprintf(stdout, + "\t In addition to the name, the user is also required to \n"); + (void) HDfprintf(stdout, + "\t provide the class and size of output data to be written to \n"); + (void) HDfprintf(stdout, + "\t the dataset and may optionally specify the output-architecture,\n"); + (void) HDfprintf(stdout, + "\t and the output-byte-order. If output-architecture is not \n"); + (void) HDfprintf(stdout, + "\t specified the default is NATIVE. Output-byte-orders are fixed\n"); + (void) HDfprintf(stdout, + "\t for some architectures and may be specified only if output-\n"); + (void) HDfprintf(stdout, "\t architecture is IEEE, UNIX or STD.\n\n"); + (void) HDfprintf(stdout, + "\t Also, layout and other storage properties such as \n"); + (void) HDfprintf(stdout, + "\t compression, external storage and extendible data-sets may be\n"); + (void) HDfprintf(stdout, + "\t optionally specified. The layout and storage properties \n"); + (void) HDfprintf(stdout, + "\t denote how raw data is to be organized on the disk. If these \n"); + (void) HDfprintf(stdout, + "\t options are not specified the default is Contiguous layout \n"); + (void) HDfprintf(stdout, "\t and storage.\n\n"); + (void) HDfprintf(stdout, + "\t The dataset can be organized in any of the following ways:\n"); + (void) HDfprintf(stdout, "\t 1. Contiguous.\n"); + (void) HDfprintf(stdout, "\t 2. Chunked.\n"); + (void) HDfprintf(stdout, + "\t 3. External Storage File (has to be contiguous)\n"); + (void) HDfprintf(stdout, + "\t 4. Extendible data sets (has to be chunked)\n"); + (void) HDfprintf(stdout, "\t 5. Compressed. (has to be chunked)\n"); + (void) HDfprintf(stdout, + "\t 6. Compressed & Extendible (has to be chunked)\n\n"); + (void) HDfprintf(stdout, + "\t If the user wants to store raw data in a non-HDF file then \n"); + (void) HDfprintf(stdout, + "\t the external storage file option is to be used and the name \n"); + (void) HDfprintf(stdout, "\t of the file is to be specified. \n\n"); + (void) HDfprintf(stdout, + "\t If the user wants the dimensions of the data-set to be\n"); + (void) HDfprintf(stdout, + "\t unlimited, the extendible data set option can be chosen. \n\n"); + (void) HDfprintf(stdout, + "\t The user may also specify the type of compression and the \n"); + (void) HDfprintf(stdout, + "\t level to which the data set must be compresses by setting \n"); + (void) HDfprintf(stdout, "\t the compressed option.\n\n"); + (void) HDfprintf(stdout, "\t SYNOPSIS:\n"); + (void) HDfprintf(stdout, "\t h5import -h[elp], OR\n"); + (void) HDfprintf( stdout, + "\t h5import <infile> -c[onfig] <configfile> \ + [<infile> -c[config] <confile2>...] -o[utfile] <outfile>\n\n"); + (void) HDfprintf(stdout, "\t -h[elp]:\n"); + (void) HDfprintf(stdout, + "\t Prints this summary of usage, and exits.\n\n"); + (void) HDfprintf(stdout, "\t <infile(s)>:\n"); + (void) HDfprintf(stdout, + "\t Name of the Input file(s), containing a \n"); + (void) HDfprintf(stdout, + "\t single n-dimensional floating point or integer array \n"); + (void) HDfprintf(stdout, + "\t in either ASCII text, native floating point(32-bit \n"); + (void) HDfprintf(stdout, + "\t or 64-bit) or native integer(8-bit or 16-bit or \n"); + (void) HDfprintf(stdout, + "\t 32-bit or 64-bit). Data to be specified in the order\n"); + (void) HDfprintf(stdout, "\t of fastest changing dimensions first.\n\n"); + (void) HDfprintf(stdout, "\t -c[config] <configfile>:\n"); + (void) HDfprintf(stdout, + "\t Every input file should be associated with a \n"); + (void) HDfprintf(stdout, + "\t configuration file and this is done by the -c option.\n"); + (void) HDfprintf(stdout, + "\t <configfile> is the name of the configuration file.\n"); + (void) HDfprintf(stdout, "\t (See Section \"CONFIGURATION FILE\")\n\n"); + (void) HDfprintf(stdout, "\t -o[utfile] <outfile>:\n"); + (void) HDfprintf(stdout, + "\t Name of the HDF5 output file. Data from one or more \n"); + (void) HDfprintf(stdout, + "\t input files are stored as one or more data sets in \n"); + (void) HDfprintf(stdout, + "\t <outfile>. The output file may be an existing file or \n"); + (void) HDfprintf(stdout, + "\t it maybe new in which case it will be created.\n\n\n"); + (void) HDfprintf(stdout, "\t CONFIGURATION FILE:\n"); + (void) HDfprintf(stdout, + "\t The configuration file is an ASCII text file and must be \n"); + (void) HDfprintf(stdout, + "\t the ddl formatted file (without data values) produced by h5dump \n"); + (void) HDfprintf(stdout, + "\t when used with the options '-o outfilename -b' of a single dataset (-d) \n"); + (void) HDfprintf(stdout, + "\t OR organized as \"CONFIG-KEYWORD VALUE\" pairs, one pair on each \n"); + (void) HDfprintf(stdout, "\t line.\n\n"); + (void) HDfprintf(stdout, + "\t The configuration file may have the following keywords each \n"); + (void) HDfprintf(stdout, "\t followed by an acceptable value.\n\n"); + (void) HDfprintf(stdout, "\t Required KEYWORDS:\n"); + (void) HDfprintf(stdout, "\t PATH\n"); + (void) HDfprintf(stdout, "\t INPUT-CLASS\n"); + (void) HDfprintf(stdout, "\t INPUT-SIZE\n"); + (void) HDfprintf(stdout, "\t RANK\n"); + (void) HDfprintf(stdout, "\t DIMENSION-SIZES\n"); + (void) HDfprintf(stdout, "\t OUTPUT-CLASS\n"); + (void) HDfprintf(stdout, "\t OUTPUT-SIZE\n\n"); + (void) HDfprintf(stdout, "\t Optional KEYWORDS:\n"); + (void) HDfprintf(stdout, "\t OUTPUT-ARCHITECTURE\n"); + (void) HDfprintf(stdout, "\t OUTPUT-BYTE-ORDER\n"); + (void) HDfprintf(stdout, "\t CHUNKED-DIMENSION-SIZES\n"); + (void) HDfprintf(stdout, "\t COMPRESSION-TYPE\n"); + (void) HDfprintf(stdout, "\t COMPRESSION-PARAM\n"); + (void) HDfprintf(stdout, "\t EXTERNAL-STORAGE\n"); + (void) HDfprintf(stdout, "\t MAXIMUM-DIMENSIONS\n\n\n"); + (void) HDfprintf(stdout, "\t Values for keywords:\n"); + (void) HDfprintf(stdout, "\t PATH:\n"); + (void) HDfprintf(stdout, "\t Strings separated by spaces to represent\n"); + (void) HDfprintf(stdout, "\t the path of the data-set. If the groups in\n"); + (void) HDfprintf(stdout, + "\t the path do not exist, they will be created. \n"); + (void) HDfprintf(stdout, "\t For example,\n"); + (void) HDfprintf(stdout, "\t PATH grp1/grp2/dataset1\n"); + (void) HDfprintf(stdout, "\t PATH: keyword\n"); + (void) HDfprintf(stdout, "\t grp1: group under the root. If\n"); + (void) HDfprintf(stdout, "\t non-existent will be created.\n"); + (void) HDfprintf(stdout, "\t grp2: group under grp1. If \n"); + (void) HDfprintf(stdout, "\t non-existent will be created \n"); + (void) HDfprintf(stdout, "\t under grp1.\n"); + (void) HDfprintf(stdout, "\t dataset1: the name of the data-set \n"); + (void) HDfprintf(stdout, "\t to be created.\n\n"); + (void) HDfprintf(stdout, "\t INPUT-CLASS:\n"); + (void) HDfprintf(stdout, "\t String denoting the type of input data.\n"); + (void) HDfprintf(stdout, "\t (\"TEXTIN\", \"TEXTFP\", \"FP\", \"IN\", \n"); + (void) HDfprintf(stdout, "\t \"STR\", \"TEXTUIN\", \"UIN\"). \n"); + (void) HDfprintf(stdout, + "\t INPUT-CLASS \"TEXTIN\" denotes an ASCII text \n"); + (void) HDfprintf(stdout, + "\t file with signed integer data in ASCII form,\n"); + (void) HDfprintf(stdout, + "\t INPUT-CLASS \"TEXTUIN\" denotes an ASCII text \n"); + (void) HDfprintf(stdout, + "\t file with unsigned integer data in ASCII form,\n"); + (void) HDfprintf(stdout, + "\t \"TEXTFP\" denotes an ASCII text file containing\n"); + (void) HDfprintf(stdout, "\t floating point data in the fixed notation\n"); + (void) HDfprintf(stdout, "\t (325.34),\n"); + (void) HDfprintf(stdout, + "\t \"FP\" denotes a floating point binary file,\n"); + (void) HDfprintf(stdout, + "\t \"IN\" denotes a signed integer binary file,\n"); + (void) HDfprintf(stdout, + "\t \"UIN\" denotes an unsigned integer binary file,\n"); + (void) HDfprintf(stdout, "\t & \"STR\" denotes an ASCII text file the \n"); + (void) HDfprintf(stdout, + "\t contents of which should be stored as an 1-D \n"); + (void) HDfprintf(stdout, "\t array of strings.\n"); + (void) HDfprintf(stdout, "\t If INPUT-CLASS is \"STR\", then RANK, \n"); + (void) HDfprintf(stdout, + "\t DIMENSION-SIZES, OUTPUT-CLASS, OUTPUT-SIZE, \n"); + (void) HDfprintf(stdout, "\t OUTPUT-ARCHITECTURE and OUTPUT-BYTE-ORDER \n"); + (void) HDfprintf(stdout, "\t will be ignored.\n\n\n"); + (void) HDfprintf(stdout, "\t INPUT-SIZE:\n"); + (void) HDfprintf(stdout, + "\t Integer denoting the size of the input data \n"); + (void) HDfprintf(stdout, "\t (8, 16, 32, 64). \n\n"); + (void) HDfprintf(stdout, "\t For floating point,\n"); + (void) HDfprintf(stdout, "\t INPUT-SIZE can be 32 or 64.\n"); + (void) HDfprintf(stdout, "\t For integers (signed and unsigned)\n"); + (void) HDfprintf(stdout, "\t INPUT-SIZE can be 8, 16, 32 or 64.\n\n"); + (void) HDfprintf(stdout, "\t RANK:\n"); + (void) HDfprintf(stdout, + "\t Integer denoting the number of dimensions.\n\n"); + (void) HDfprintf(stdout, "\t DIMENSION-SIZES:\n"); + (void) HDfprintf(stdout, + "\t Integers separated by spaces to denote the \n"); + (void) HDfprintf(stdout, "\t dimension sizes for the no. of dimensions \n"); + (void) HDfprintf(stdout, "\t determined by rank.\n\n"); + (void) HDfprintf(stdout, "\t OUTPUT-CLASS:\n"); + (void) HDfprintf(stdout, + "\t String dentoting data type of the dataset to \n"); + (void) HDfprintf(stdout, "\t be written (\"IN\",\"FP\", \"UIN\")\n\n"); + (void) HDfprintf(stdout, "\t OUTPUT-SIZE:\n"); + (void) HDfprintf(stdout, + "\t Integer denoting the size of the data in the \n"); + (void) HDfprintf(stdout, "\t output dataset to be written.\n"); + (void) HDfprintf(stdout, + "\t If OUTPUT-CLASS is \"FP\", OUTPUT-SIZE can be \n"); + (void) HDfprintf(stdout, "\t 32 or 64.\n"); + (void) HDfprintf(stdout, + "\t If OUTPUT-CLASS is \"IN\" or \"UIN\", OUTPUT-SIZE\n"); + (void) HDfprintf(stdout, "\t can be 8, 16, 32 or 64.\n\n"); + (void) HDfprintf(stdout, "\t OUTPUT-ARCHITECTURE:\n"); + (void) HDfprintf(stdout, "\t STRING denoting the type of output \n"); + (void) HDfprintf(stdout, + "\t architecture. Can accept the following values\n"); + (void) HDfprintf(stdout, "\t STD\n"); + (void) HDfprintf(stdout, "\t IEEE\n"); + (void) HDfprintf(stdout, "\t INTEL\n"); + (void) HDfprintf(stdout, "\t CRAY\n"); + (void) HDfprintf(stdout, "\t MIPS\n"); + (void) HDfprintf(stdout, "\t ALPHA\n"); + (void) HDfprintf(stdout, "\t NATIVE (default)\n"); + (void) HDfprintf(stdout, "\t UNIX\n\n"); + (void) HDfprintf(stdout, "\t OUTPUT-BYTE-ORDER:\n"); + (void) HDfprintf(stdout, + "\t String denoting the output-byte-order. Ignored\n"); + (void) HDfprintf(stdout, + "\t if the OUTPUT-ARCHITECTURE is not specified or\n"); + (void) HDfprintf(stdout, "\t if it is IEEE, UNIX or STD. Can accept the \n"); + (void) HDfprintf(stdout, "\t following values.\n"); + (void) HDfprintf(stdout, "\t BE (default)\n"); + (void) HDfprintf(stdout, "\t LE\n\n"); + (void) HDfprintf(stdout, "\t CHUNKED-DIMENSION-SIZES:\n"); + (void) HDfprintf(stdout, "\t Integers separated by spaces to denote the \n"); + (void) HDfprintf(stdout, + "\t dimension sizes of the chunk for the no. of \n"); + (void) HDfprintf(stdout, + "\t dimensions determined by rank. Required field\n"); + (void) HDfprintf(stdout, + "\t to denote that the dataset will be stored with\n"); + (void) HDfprintf(stdout, + "\t chunked storage. If this field is absent the\n"); + (void) HDfprintf(stdout, + "\t dataset will be stored with contiguous storage.\n\n"); + (void) HDfprintf(stdout, "\t COMPRESSION-TYPE:\n"); + (void) HDfprintf(stdout, + "\t String denoting the type of compression to be\n"); + (void) HDfprintf(stdout, "\t used with the chunked storage. Requires the\n"); + (void) HDfprintf(stdout, + "\t CHUNKED-DIMENSION-SIZES to be specified. The only \n"); + (void) HDfprintf(stdout, + "\t currently supported compression method is GZIP. \n"); + (void) HDfprintf(stdout, "\t Will accept the following value\n"); + (void) HDfprintf(stdout, "\t GZIP\n\n"); + (void) HDfprintf(stdout, "\t COMPRESSION-PARAM:\n"); + (void) HDfprintf(stdout, + "\t Integer used to denote compression level and \n"); + (void) HDfprintf(stdout, "\t this option is to be always specified when \n"); + (void) HDfprintf(stdout, + "\t the COMPRESSION-TYPE option is specified. The\n"); + (void) HDfprintf(stdout, "\t values are applicable only to GZIP \n"); + (void) HDfprintf(stdout, "\t compression.\n"); + (void) HDfprintf(stdout, "\t Value 1-9: The level of Compression. \n"); + (void) HDfprintf(stdout, "\t 1 will result in the fastest \n"); + (void) HDfprintf(stdout, "\t compression while 9 will result in \n"); + (void) HDfprintf(stdout, "\t the best compression ratio. The default\n"); + (void) HDfprintf(stdout, "\t level of compression is 6.\n\n"); + (void) HDfprintf(stdout, "\t EXTERNAL-STORAGE:\n"); + (void) HDfprintf(stdout, + "\t String to denote the name of the non-HDF5 file \n"); + (void) HDfprintf(stdout, + "\t to store data to. Cannot be used if CHUNKED-\n"); + (void) HDfprintf(stdout, + "\t DIMENSIONS or COMPRESSION-TYPE or EXTENDIBLE-\n"); + (void) HDfprintf(stdout, "\t DATASET is specified.\n"); + (void) HDfprintf(stdout, "\t Value <external-filename>: the name of the \n"); + (void) HDfprintf(stdout, "\t external file as a string to be used.\n\n"); + (void) HDfprintf(stdout, "\t MAXIMUM-DIMENSIONS:\n"); + (void) HDfprintf(stdout, "\t Integers separated by spaces to denote the \n"); + (void) HDfprintf(stdout, "\t maximum dimension sizes of all the \n"); + (void) HDfprintf(stdout, "\t dimensions determined by rank. Requires the\n"); + (void) HDfprintf(stdout, + "\t CHUNKED-DIMENSION-SIZES to be specified. A value of \n"); + (void) HDfprintf(stdout, "\t -1 for any dimension implies UNLIMITED \n"); + (void) HDfprintf(stdout, + "\t DIMENSION size for that particular dimension.\n\n"); + (void) HDfprintf(stdout, "\t EXAMPLES:\n"); + (void) HDfprintf(stdout, "\t 1. Configuration File may look like:\n\n"); + (void) HDfprintf(stdout, "\t PATH work h5 pkamat First-set\n"); + (void) HDfprintf(stdout, "\t INPUT-CLASS TEXTFP\n"); + (void) HDfprintf(stdout, "\t RANK 3\n"); + (void) HDfprintf(stdout, "\t DIMENSION-SIZES 5 2 4\n"); + (void) HDfprintf(stdout, "\t OUTPUT-CLASS FP\n"); + (void) HDfprintf(stdout, "\t OUTPUT-SIZE 64\n"); + (void) HDfprintf(stdout, "\t OUTPUT-ARCHITECTURE IEEE\n"); + (void) HDfprintf(stdout, "\t OUTPUT-BYTE-ORDER LE\n"); + (void) HDfprintf(stdout, "\t CHUNKED-DIMENSION-SIZES 2 2 2 \n\n"); + (void) HDfprintf(stdout, + "\t The above configuration will accept a floating point array \n"); + (void) HDfprintf(stdout, + "\t (5 x 2 x 4) in an ASCII file with the rank and dimension sizes \n"); + (void) HDfprintf(stdout, + "\t specified and will save it in a chunked data-set (of pattern \n"); + (void) HDfprintf(stdout, + "\t 2 X 2 X 2) of 64-bit floating point in the little-endian order \n"); + (void) HDfprintf(stdout, + "\t and IEEE architecture. The dataset will be stored at\n"); + (void) HDfprintf(stdout, "\t \"/work/h5/pkamat/First-set\"\n\n"); + (void) HDfprintf(stdout, "\t 2. Another configuration could be:\n\n"); + (void) HDfprintf(stdout, "\t PATH Second-set\n"); + (void) HDfprintf(stdout, "\t INPUT-CLASS IN \n"); + (void) HDfprintf(stdout, "\t RANK 5\n"); + (void) HDfprintf(stdout, "\t DIMENSION-SIZES 6 3 5 2 4\n"); + (void) HDfprintf(stdout, "\t OUTPUT-CLASS IN\n"); + (void) HDfprintf(stdout, "\t OUTPUT-SIZE 32\n"); + (void) HDfprintf(stdout, "\t CHUNKED-DIMENSION-SIZES 2 2 2 2 2\n"); + (void) HDfprintf(stdout, "\t EXTENDIBLE-DATASET 1 3 \n"); + (void) HDfprintf(stdout, "\t COMPRESSION-TYPE GZIP\n"); + (void) HDfprintf(stdout, "\t COMPRESSION-PARAM 7\n\n\n"); + (void) HDfprintf(stdout, + "\t The above configuration will accept an integer array \n"); + (void) HDfprintf(stdout, + "\t (6 X 3 X 5 x 2 x 4) in a binary file with the rank and \n"); + (void) HDfprintf(stdout, + "\t dimension sizes specified and will save it in a chunked data-set\n"); + (void) HDfprintf(stdout, + "\t (of pattern 2 X 2 X 2 X 2 X 2) of 32-bit floating point in \n"); + (void) HDfprintf(stdout, + "\t native format (as output-architecture is not specified). The \n"); + (void) HDfprintf(stdout, + "\t first and the third dimension will be defined as unlimited. The \n"); + (void) HDfprintf(stdout, + "\t data-set will be compressed using GZIP and a compression level \n"); + (void) HDfprintf(stdout, "\t of 7.\n"); + (void) HDfprintf(stdout, + "\t The dataset will be stored at \"/Second-set\"\n\n"); + return; +} + +void usage(char *name) +{ + (void) HDfprintf(stdout, "\nUsage:\t%s -h[elp], OR\n", name); + (void) HDfprintf(stdout, + "\t%s <infile> -c[onfig] <configfile> \ + [<infile> -c[config] <configfile>...] -o[utfile] <outfile> \n\n", name); + return; +} + diff --git a/tools/src/h5import/h5import.h b/tools/src/h5import/h5import.h new file mode 100644 index 0000000..c242483 --- /dev/null +++ b/tools/src/h5import/h5import.h @@ -0,0 +1,198 @@ +/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * + * Copyright by The HDF Group. * + * Copyright by the Board of Trustees of the University of Illinois. * + * All rights reserved. * + * * + * This file is part of HDF5. The full HDF5 copyright notice, including * + * terms governing use, modification, and redistribution, is contained in * + * the files COPYING and Copyright.html. COPYING can be found at the root * + * of the source code distribution tree; Copyright.html can be found at the * + * root level of an installed copy of the electronic HDF5 document set and * + * is linked from the top-level documents page. It can also be found at * + * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have * + * access to either file, you may request a copy from help@hdfgroup.org. * + * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ + +/* + * + * Data and structure definitions for h5import + * + */ + +#ifndef H5IMPORT_H__ +#define H5IMPORT_H__ + +/* + * state table tokens + */ +#define FILNAME 0 +/* filename */ +#define OPT_o 1 +/* output filename */ +#define OPT_c 2 /* configuration filename */ +#define OPT_h 3 /* request for explanation */ +#define OPT_d 4 /* dimensions */ +#define OPT_p 5 /* pathname */ +#define OPT_t 6 /* data type */ +#define OPT_s 7 /* data size */ +#define ERR 20 /* invalid token */ + +#define MAX_GROUPS_IN_PATH 20 +#define MAX_PATH_NAME_LENGTH 255 +#define NUM_KEYS 14 +#define MIN_NUM_DIMENSION 1 +#define MAX_NUM_DIMENSION 32 +#define BASE_10 10 + +#define PATH 0 +#define INPUT_CLASS 1 +#define INPUT_SIZE 2 +#define RANK 3 +#define DIM 4 +#define OUTPUT_CLASS 5 +#define OUTPUT_SIZE 6 +#define OUTPUT_ARCH 7 +#define OUTPUT_B_ORDER 8 +#define CHUNK 9 +#define COMPRESS 10 +#define COMPRESS_PARAM 11 +#define EXTERNALSTORE 12 +#define EXTEND 13 + +/* data types */ +#define H5DT_INT8 signed char +#define H5DT_INT16 short +#define H5DT_INT32 int +#define H5DT_FLOAT32 float +#define H5DT_FLOAT64 double +#define VOIDP void* +#define H5DT_UINT8 unsigned char +#define H5DT_UINT16 unsigned short +#define H5DT_UINT32 unsigned int +#define H5DT_INT64 long long +#define H5DT_UINT64 unsigned H5DT_INT64 + +struct path_info +{ + char group[MAX_GROUPS_IN_PATH][MAX_PATH_NAME_LENGTH]; + int count; +}; + +struct Input +{ + int h5dumpInput; + struct path_info path; + int inputClass; + int inputSize; + int rank; + hsize_t* sizeOfDimension; + int outputClass; + int outputSize; + int outputArchitecture; + int outputByteOrder; + hsize_t* sizeOfChunk; + hsize_t* maxsizeOfDimension; + int compressionType; + int compressionParam; + char *externFilename; + VOIDP data; + int configOptionVector[NUM_KEYS]; +}; + +struct infilesformat +{ + char datafile[255]; + char configfile[255]; + struct Input in; + int config; /* Configfile present? No - 0. Yes - 1 */ +}; + +struct Options +{ + struct infilesformat infiles[30]; /* structure to hold the list of input file names. Limited to 30*/ + char outfile[256]; /* output file name */ + int fcount; /* number of input files */ +}; + +char keytable[NUM_KEYS][30] = { + "PATH", + "INPUT-CLASS", + "INPUT-SIZE", + "RANK", + "DIMENSION-SIZES", + "OUTPUT-CLASS", + "OUTPUT-SIZE", + "OUTPUT-ARCHITECTURE", + "OUTPUT-BYTE-ORDER", + "CHUNKED-DIMENSION-SIZES", + "COMPRESSION-TYPE", + "COMPRESSION-PARAM", + "EXTERNAL-STORAGE", + "MAXIMUM-DIMENSIONS" +}; + +static int state_table[15][8] = +{ + /* token ordering: FILNAME OPT_o OPT_c OPT_h OPT_d OPT_p OPT_t OPT_s */ + + /* state 0: start */ + {1, ERR, ERR, 6, ERR, ERR, ERR, ERR}, + + /* state 1: input files */ + {ERR, ERR, 2, ERR, 7, ERR, ERR, ERR}, + + /* state 2: -c[onfigfile] */ + {3, ERR, ERR, ERR, ERR, ERR, ERR, ERR}, + + /* state 3: configfile */ + {1, 4, ERR, ERR, ERR, ERR, ERR, ERR}, + + /* state 4: -o[utfile] */ + {5, ERR, ERR, ERR, ERR, ERR, ERR, ERR}, + + /* state 5: outfile */ + {ERR, ERR, ERR, ERR, ERR, ERR, ERR, ERR}, + + /* state 6: -h[elp] */ + {ERR, ERR, ERR, ERR, ERR, ERR, ERR, ERR}, + + /* state 7: -d[ims] */ + {8, ERR, ERR, ERR, ERR, ERR, ERR, ERR}, + + /* state 8: dimensions */ + {1, 4, ERR, ERR, ERR, 9, 11, 13}, + + /* state 9: -p[ath] */ + {10, ERR, ERR, ERR, ERR, ERR, ERR, ERR}, + + /* state 10: path name */ + {1, 4, ERR, ERR, ERR, ERR, 11, 13}, + + /* state 11: -t[ype] */ + {12, ERR, ERR, ERR, ERR, ERR, ERR, ERR}, + + /* state 12: data type */ + {1, 4, ERR, ERR, ERR, ERR, ERR, 13}, + + /* state 13: -s[ize] */ + {14, ERR, ERR, ERR, ERR, ERR, ERR, ERR}, + + /* state 14: data size */ + {1, 4, ERR, ERR, ERR, ERR, ERR, ERR} + +}; + +/* + * + * Function declarations for h5import + * + */ +void usage(char *); +void setDefaultValues(struct Input *in, int count); +void help(char *); + +hid_t createOutputDataType(struct Input *in); +hid_t createInputDataType(struct Input *in); + +#endif /* H5IMPORT_H__ */ + |