1.12 Tools merges from develop (#949)

* Tools merges from develop

Brings the tools getopt(3) replacement into the main library (#803)
Perform option arg variables (#834)
Removes unused commented-out code from h5jamgentest.c (#851)
Reorg tools perform to provide h5perf for installation (#884)

* Fix missing files

* Remove empty files

* Remove empty file

* Resync defines

* Fix endif typo

* Add Makfile to list

* Fix typo

* Remove H5_GCC_DIAG_ON line to match removal of H5_GCC_DIAG_OFF line in
sio_engine.c/

Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Larry Knox <lrknox@hdfgroup.org>

1 files changed, 109 insertions, 0 deletions

diff --git a/tools/src/h5perf/pio_perf.h b/tools/src/h5perf/pio_perf.h
new file mode 100644
index 0000000..8924c20
--- /dev/null
+++ b/tools/src/h5perf/pio_perf.h
@@ -0,0 +1,109 @@
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group.                                               *
+ * All rights reserved.                                                      *
+ *                                                                           *
+ * This file is part of HDF5.  The full HDF5 copyright notice, including     *
+ * terms governing use, modification, and redistribution, is contained in    *
+ * the COPYING file, which can be found at the root of the source code       *
+ * distribution tree, or in https://www.hdfgroup.org/licenses.               *
+ * If you do not have access to either file, you may request a copy from     *
+ * help@hdfgroup.org.                                                        *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+#ifndef PIO_PERF_H
+#define PIO_PERF_H
+
+#ifndef STANDALONE
+#include "io_timer.h"
+#include "H5private.h"
+#include "h5tools.h"
+#include "h5tools_utils.h"
+#else
+#include "io_timer.h"
+#include "pio_standalone.h"
+#endif
+
+#ifdef H5_HAVE_PARALLEL
+extern MPI_Info h5_io_info_g; /* MPI INFO object for IO */
+#endif
+
+#ifdef H5_HAVE_PARALLEL
+int  h5_set_info_object(void);
+void h5_dump_info_object(MPI_Info info);
+#endif
+
+/* setup the dataset no fill option if this is v1.5 or more */
+#if H5_VERS_MAJOR > 1 || H5_VERS_MINOR > 4
+#define H5_HAVE_NOFILL 1
+#endif
+
+typedef enum iotype_ {
+    POSIXIO,
+    MPIO,
+    PHDF5
+    /*NUM_TYPES*/
+} iotype;
+
+typedef struct parameters_ {
+    iotype   io_type;       /* The type of IO test to perform       */
+    int      num_procs;     /* Maximum number of processes to use   */
+    long     num_files;     /* Number of files to create            */
+    long     num_dsets;     /* Number of datasets to create         */
+    off_t    num_bytes;     /* Number of bytes in each dset         */
+    int      num_iters;     /* Number of times to loop doing the IO */
+    size_t   buf_size;      /* Buffer size                          */
+    size_t   blk_size;      /* Block size                           */
+    unsigned interleaved;   /* Interleaved vs. contiguous blocks    */
+    unsigned collective;    /* Collective vs. independent I/O       */
+    unsigned dim2d;         /* 1D vs. 2D                            */
+    hsize_t  h5_align;      /* HDF5 object alignment                */
+    hsize_t  h5_thresh;     /* HDF5 object alignment threshold      */
+    int      h5_use_chunks; /* Make HDF5 dataset chunked            */
+    int      h5_write_only; /* Perform the write tests only         */
+    int      verify;        /* Verify data correctness              */
+} parameters;
+
+typedef struct results_ {
+    herr_t     ret_code;
+    io_time_t *timers;
+} results;
+
+#ifndef SUCCESS
+#define SUCCESS 0
+#endif /* !SUCCESS */
+
+#ifndef FAIL
+#define FAIL -1
+#endif /* !FAIL */
+
+extern FILE *     output;              /* output file                          */
+extern io_time_t *timer_g;             /* timer: global for stub functions     */
+extern int        comm_world_rank_g;   /* my rank in MPI_COMM_RANK             */
+extern int        comm_world_nprocs_g; /* num. of processes of MPI_COMM_WORLD  */
+extern MPI_Comm   pio_comm_g;          /* Communicator to run the PIO          */
+extern int        pio_mpi_rank_g;      /* MPI rank of pio_comm_g               */
+extern int        pio_mpi_nprocs_g;    /* number of processes of pio_comm_g    */
+extern int        pio_debug_level;     /* The debug level:
+                                        *   0 - Off
+                                        *   1 - Minimal
+                                        *   2 - Some more
+                                        *   3 - Maximal
+                                        *   4 - Even More Debugging (timer stuff)
+                                        */
+
+#define HDprint_rank(f)      /* print rank in MPI_COMM_WORLD */ HDfprintf(f, "%d: ", comm_world_rank_g);
+#define HDprint_size(f)      /* print size of MPI_COMM_WORLD */ HDfprintf(f, "%d", comm_world_nprocs_g);
+#define HDprint_rank_size(f) /* print rank/size of MPI_COMM_WORLD */                                         \
+    HDfprintf(f, "%d/%d: ", comm_world_rank_g, comm_world_nprocs_g);
+
+#ifdef __cplusplus
+extern "C" {
+#endif /* __cplusplus */
+
+extern results do_pio(parameters param);
+
+#ifdef __cplusplus
+}
+#endif /* __cplusplus */
+
+#endif /* PIO_PERF_H */