diff options
author | Larry Knox <lrknox@hdfgroup.org> | 2020-10-16 22:47:27 (GMT) |
---|---|---|
committer | Larry Knox <lrknox@hdfgroup.org> | 2020-10-16 22:47:27 (GMT) |
commit | db30c2da68ece4a155e9e50c28ec16d6057509b2 (patch) | |
tree | 1d36f673c36dfee71c266bba39511da21ecc782e /tools/src/h5repack/h5repack_main.c | |
parent | 5b9cf732caab9daa6ed1e00f2df4f5a792340196 (diff) | |
parent | 2e2b87d1cbdee3b919e6e5cba6c5ecd1b9434434 (diff) | |
download | hdf5-db30c2da68ece4a155e9e50c28ec16d6057509b2.zip hdf5-db30c2da68ece4a155e9e50c28ec16d6057509b2.tar.gz hdf5-db30c2da68ece4a155e9e50c28ec16d6057509b2.tar.bz2 |
Merge HDF5 1.10.7 release files into 1.10/masterhdf5-1_10_7
Diffstat (limited to 'tools/src/h5repack/h5repack_main.c')
-rw-r--r-- | tools/src/h5repack/h5repack_main.c | 194 |
1 files changed, 114 insertions, 80 deletions
diff --git a/tools/src/h5repack/h5repack_main.c b/tools/src/h5repack/h5repack_main.c index b4e1985..009755e 100644 --- a/tools/src/h5repack/h5repack_main.c +++ b/tools/src/h5repack/h5repack_main.c @@ -32,36 +32,38 @@ const char *outfile = NULL; * Command-line options: The user can specify short or long-named * parameters. */ -static const char *s_opts = "hVvf:l:m:e:nLj:k:c:d:s:u:b:M:t:a:i:o:S:P:T:G:q:z:E"; +static const char *s_opts = "a:b:c:d:e:f:hi:j:k:l:m:no:q:s:t:u:vz:EG:LM:P:S:T:VXW"; static struct long_options l_opts[] = { - { "help", no_arg, 'h' }, - { "version", no_arg, 'V' }, - { "verbose", no_arg, 'v' }, + { "alignment", require_arg, 'a' }, + { "block", require_arg, 'b' }, + { "compact", require_arg, 'c' }, + { "indexed", require_arg, 'd' }, + { "file", require_arg, 'e' }, { "filter", require_arg, 'f' }, + { "help", no_arg, 'h' }, + { "infile", require_arg, 'i' }, /* for backward compability */ + { "low", require_arg, 'j' }, + { "high", require_arg, 'k' }, { "layout", require_arg, 'l' }, { "minimum", require_arg, 'm' }, - { "file", require_arg, 'e' }, { "native", no_arg, 'n' }, - { "latest", no_arg, 'L' }, - { "low", require_arg, 'j' }, - { "high", require_arg, 'k' }, - { "compact", require_arg, 'c' }, - { "indexed", require_arg, 'd' }, + { "outfile", require_arg, 'o' }, /* for backward compability */ + { "sort_by", require_arg, 'q' }, { "ssize", require_arg, 's' }, + { "threshold", require_arg, 't' }, { "ublock", require_arg, 'u' }, - { "block", require_arg, 'b' }, + { "verbose", no_arg, 'v' }, + { "sort_order", require_arg, 'z' }, + { "enable-error-stack", no_arg, 'E' }, + { "fs_pagesize", require_arg, 'G' }, + { "latest", no_arg, 'L' }, { "metadata_block_size", require_arg, 'M' }, - { "threshold", require_arg, 't' }, - { "alignment", require_arg, 'a' }, - { "infile", require_arg, 'i' }, /* for backward compability */ - { "outfile", require_arg, 'o' }, /* for backward compability */ - { "fs_strategy", require_arg, 'S' }, { "fs_persist", require_arg, 'P' }, + { "fs_strategy", require_arg, 'S' }, { "fs_threshold", require_arg, 'T' }, - { "fs_pagesize", require_arg, 'G' }, - { "sort_by", require_arg, 'q' }, - { "sort_order", require_arg, 'z' }, - { "enable-error-stack", no_arg, 'E' }, + { "version", no_arg, 'V' }, + { "merge", no_arg, 'X' }, + { "prune", no_arg, 'W' }, { NULL, 0, '\0' } }; @@ -95,6 +97,9 @@ static void usage(const char *prog) { PRINTVALSTREAM(rawoutstream, " --high=BOUND The high bound for library release versions to use\n"); PRINTVALSTREAM(rawoutstream, " when creating objects in the file\n"); PRINTVALSTREAM(rawoutstream, " (default is H5F_LIBVER_LATEST)\n"); + PRINTVALSTREAM(rawoutstream, " --merge Follow external soft link recursively and merge data\n"); + PRINTVALSTREAM(rawoutstream, " --prune Do not follow external soft links and remove link\n"); + PRINTVALSTREAM(rawoutstream, " --merge --prune Follow external link, merge data and remove dangling link\n"); PRINTVALSTREAM(rawoutstream, " -c L1, --compact=L1 Maximum number of links in header messages\n"); PRINTVALSTREAM(rawoutstream, " -d L2, --indexed=L2 Minimum number of links in the indexed format\n"); PRINTVALSTREAM(rawoutstream, " -s S[:F], --ssize=S[:F] Shared object header message minimum size\n"); @@ -279,7 +284,7 @@ int read_info(const char *filename, pack_opt_t *options) char comp_info[1024]; FILE *fp = NULL; char c; - int i, rc = 1; + int i; int ret_value = EXIT_SUCCESS; if (NULL == (fp = HDfopen(filename, "r"))) { @@ -291,6 +296,8 @@ int read_info(const char *filename, pack_opt_t *options) /* cycle until end of file reached */ while (1) { + if (EOF == fscanf(fp, "%9s", stype)) + break; /* Info indicator must be for layout or filter */ if (HDstrcmp(stype,"-l") && HDstrcmp(stype, "-f")) { @@ -332,7 +339,7 @@ int read_info(const char *filename, pack_opt_t *options) if (!HDstrcmp(stype, "-l")) { if (h5repack_addlayout(comp_info, options) == -1) { - error_msg("could not add chunck option\n"); + error_msg("could not add chunk option\n"); h5tools_setstatus(EXIT_FAILURE); ret_value = EXIT_FAILURE; goto done; @@ -410,7 +417,7 @@ set_sort_order(const char *form) static int parse_command_line(int argc, const char **argv, pack_opt_t* options) { - int opt; + int bound, opt; int ret_value = 0; /* parse command line options */ @@ -432,13 +439,13 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) case 'h': usage(h5tools_getprogname()); h5tools_setstatus(EXIT_SUCCESS); - ret_value = -1; + ret_value = 1; goto done; case 'V': print_version(h5tools_getprogname()); h5tools_setstatus(EXIT_SUCCESS); - ret_value = -1; + ret_value = 1; goto done; case 'v': @@ -476,9 +483,12 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) break; case 'e': - ret_value = read_info(opt_arg, options); - if (ret_value < 0) + if ((ret_value = read_info(opt_arg, options)) < 0) { + error_msg("failed to read from repack options file <%s>\n", opt_arg); + h5tools_setstatus(EXIT_FAILURE); + ret_value = -1; goto done; + } break; case 'n': @@ -490,19 +500,33 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) break; case 'j': - options->low_bound = (H5F_libver_t)HDatoi(opt_arg); - if (options->low_bound < H5F_LIBVER_EARLIEST || options->low_bound > H5F_LIBVER_LATEST) { + bound = HDatoi(opt_arg); + if (bound < H5F_LIBVER_EARLIEST || bound > H5F_LIBVER_LATEST) { error_msg("in parsing low bound\n"); + h5tools_setstatus(EXIT_FAILURE); + ret_value = -1; goto done; } + options->low_bound = bound; break; case 'k': - options->high_bound = (H5F_libver_t)HDatoi(opt_arg); - if (options->high_bound < H5F_LIBVER_EARLIEST || options->high_bound > H5F_LIBVER_LATEST) { + bound = HDatoi(opt_arg); + if (bound < H5F_LIBVER_EARLIEST || bound > H5F_LIBVER_LATEST) { error_msg("in parsing high bound\n"); + h5tools_setstatus(EXIT_FAILURE); + ret_value = -1; goto done; } + options->high_bound = bound; + break; + + case 'X': + options->merge = TRUE; + break; + + case 'W': + options->prune = TRUE; break; case 'c': @@ -621,8 +645,8 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) break; case 'q': - if (H5_INDEX_UNKNOWN == set_sort_by(opt_arg)) { - error_msg(" failed to set sort by form <%s>\n", opt_arg); + if (H5_INDEX_UNKNOWN == (sort_by = set_sort_by(opt_arg))) { + error_msg("failed to set sort by form <%s>\n", opt_arg); h5tools_setstatus(EXIT_FAILURE); ret_value = -1; goto done; @@ -630,8 +654,8 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) break; case 'z': - if (set_sort_order(opt_arg) == H5_ITER_UNKNOWN) { - error_msg(" failed to set sort order form <%s>\n", opt_arg); + if (H5_ITER_UNKNOWN == (sort_order = set_sort_order(opt_arg))) { + error_msg("failed to set sort order form <%s>\n", opt_arg); h5tools_setstatus(EXIT_FAILURE); ret_value = -1; goto done; @@ -649,30 +673,30 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) /* If neither -i nor -o given, get in and out files positionally */ if (0 == (has_i + has_o)) { - if (argv[opt_ind] != NULL && argv[opt_ind + 1] != NULL) { - infile = argv[opt_ind]; - outfile = argv[opt_ind + 1]; - - if (!HDstrcmp(infile, outfile)) { - error_msg("file names cannot be the same\n"); - usage(h5tools_getprogname()); - h5tools_setstatus(EXIT_FAILURE); - ret_value = -1; - } - } - else { - error_msg("file names missing\n"); - usage(h5tools_getprogname()); - h5tools_setstatus(EXIT_FAILURE); - ret_value = -1; - } - } - else if (has_i != 1 || has_o != 1) { - error_msg("filenames must be either both -i -o or both positional\n"); - usage(h5tools_getprogname()); - h5tools_setstatus(EXIT_FAILURE); - ret_value = -1; - } + if (argv[opt_ind] != NULL && argv[opt_ind + 1] != NULL) { + infile = argv[opt_ind]; + outfile = argv[opt_ind + 1]; + + if (!HDstrcmp(infile, outfile)) { + error_msg("file names cannot be the same\n"); + usage(h5tools_getprogname()); + h5tools_setstatus(EXIT_FAILURE); + ret_value = -1; + } + } + else { + error_msg("file names missing\n"); + usage(h5tools_getprogname()); + h5tools_setstatus(EXIT_FAILURE); + ret_value = -1; + } + } + else if (has_i != 1 || has_o != 1) { + error_msg("filenames must be either both -i -o or both positional\n"); + usage(h5tools_getprogname()); + h5tools_setstatus(EXIT_FAILURE); + ret_value = -1; + } done: return ret_value; @@ -690,54 +714,64 @@ done: */ int main(int argc, const char **argv) { - pack_opt_t options; /*the global options */ - H5E_auto2_t func; - H5E_auto2_t tools_func; - void *edata; - void *tools_edata; + pack_opt_t options; /*the global options */ + int parse_ret; HDmemset(&options, 0, sizeof(pack_opt_t)); - h5tools_setprogname(PROGRAMNAME); - h5tools_setstatus(EXIT_SUCCESS); - - /* Disable error reporting */ - H5Eget_auto2(H5E_DEFAULT, &func, &edata); - H5Eset_auto2(H5E_DEFAULT, NULL, NULL); - /* Initialize h5tools lib */ h5tools_init(); - /* Disable tools error reporting */ - H5Eget_auto2(H5tools_ERR_STACK_g, &tools_func, &tools_edata); - H5Eset_auto2(H5tools_ERR_STACK_g, NULL, NULL); + h5tools_setprogname(PROGRAMNAME); + h5tools_setstatus(EXIT_SUCCESS); /* update hyperslab buffer size from H5TOOLS_BUFSIZE env if exist */ if (h5tools_getenv_update_hyperslab_bufsize() < 0) { + HDprintf("Error occurred while retrieving H5TOOLS_BUFSIZE value\n"); h5tools_setstatus(EXIT_FAILURE); goto done; } /* initialize options */ if (h5repack_init(&options, 0, FALSE) < 0) { + HDprintf("Error occurred while initializing repack options\n"); h5tools_setstatus(EXIT_FAILURE); goto done; } + /* Initialize default indexing options */ sort_by = H5_INDEX_CRT_ORDER; - if (parse_command_line(argc, argv, &options) < 0) + parse_ret = parse_command_line(argc, argv, &options); + if (parse_ret < 0) { + HDprintf("Error occurred while parsing command-line options\n"); + h5tools_setstatus(EXIT_FAILURE); + goto done; + } + else if (parse_ret > 0) { + /* Short-circuit success */ + h5tools_setstatus(EXIT_SUCCESS); goto done; - - if (enable_error_stack > 0) { - H5Eset_auto2(H5E_DEFAULT, func, edata); - H5Eset_auto2(H5tools_ERR_STACK_g, tools_func, tools_edata); } + /* enable error reporting if command line option */ + h5tools_error_report(); + /* pack it */ - h5tools_setstatus(h5repack(infile, outfile, &options)); + if (h5repack(infile, outfile, &options) < 0) { + HDprintf("Error occurred while repacking\n"); + h5tools_setstatus(EXIT_FAILURE); + goto done; + } + + h5tools_setstatus(EXIT_SUCCESS); done: + if (options.fin_fapl >= 0 && options.fin_fapl != H5P_DEFAULT) + H5Pclose(options.fin_fapl); + if (options.fout_fapl >= 0 && options.fout_fapl != H5P_DEFAULT) + H5Pclose(options.fout_fapl); + /* free tables */ h5repack_end(&options); |