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authorAllen Byrne <50328838+byrnHDF@users.noreply.github.com>2022-02-27 01:07:39 (GMT)
committerGitHub <noreply@github.com>2022-02-27 01:07:39 (GMT)
commite8b030363999befa548b94ac5c505d170540aebc (patch)
tree23e9d091c88e76bfe8ab842efa87cdda89e39974 /tools/src
parent1c10010a316c0885cd71fad6c8d0067a0eb8f7f1 (diff)
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1.10 Fix tools incompatibility (#1449)
* fix tools incompatibility with get_option #1443 * Fix get_option function * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
Diffstat (limited to 'tools/src')
-rw-r--r--tools/src/h5copy/h5copy.c48
-rw-r--r--tools/src/h5diff/h5diff_common.c84
-rw-r--r--tools/src/h5dump/h5dump.c172
-rw-r--r--tools/src/h5dump/h5dump_ddl.c4
-rw-r--r--tools/src/h5format_convert/h5format_convert.c22
-rw-r--r--tools/src/h5jam/h5jam.c16
-rw-r--r--tools/src/h5jam/h5unjam.c16
-rw-r--r--tools/src/h5perf/pio_perf.c72
-rw-r--r--tools/src/h5perf/sio_perf.c92
-rw-r--r--tools/src/h5repack/h5repack_main.c132
-rw-r--r--tools/src/h5stat/h5stat.c58
-rw-r--r--tools/src/misc/h5clear.c16
-rw-r--r--tools/src/misc/h5mkgrp.c26
13 files changed, 379 insertions, 379 deletions
diff --git a/tools/src/h5copy/h5copy.c b/tools/src/h5copy/h5copy.c
index 6f10fee..933e230 100644
--- a/tools/src/h5copy/h5copy.c
+++ b/tools/src/h5copy/h5copy.c
@@ -19,23 +19,23 @@
#define PROGRAMNAME "h5copy"
/* command-line options: short and long-named parameters */
-static const char * s_opts = "d:f:hi:o:ps:vVE";
-static struct h5_long_options l_opts[] = {{"destination", require_arg, 'd'},
- {"flag", require_arg, 'f'},
- {"help", no_arg, 'h'},
- {"input", require_arg, 'i'},
- {"output", require_arg, 'o'},
- {"parents", no_arg, 'p'},
- {"source", require_arg, 's'},
- {"verbose", no_arg, 'v'},
- {"version", no_arg, 'V'},
- {"enable-error-stack", no_arg, 'E'},
- {NULL, 0, '\0'}};
-char * fname_src = NULL;
-char * fname_dst = NULL;
-char * oname_src = NULL;
-char * oname_dst = NULL;
-char * str_flag = NULL;
+static const char * s_opts = "d:f:hi:o:ps:vVE";
+static struct long_options l_opts[] = {{"destination", require_arg, 'd'},
+ {"flag", require_arg, 'f'},
+ {"help", no_arg, 'h'},
+ {"input", require_arg, 'i'},
+ {"output", require_arg, 'o'},
+ {"parents", no_arg, 'p'},
+ {"source", require_arg, 's'},
+ {"verbose", no_arg, 'v'},
+ {"version", no_arg, 'V'},
+ {"enable-error-stack", no_arg, 'E'},
+ {NULL, 0, '\0'}};
+char * fname_src = NULL;
+char * fname_dst = NULL;
+char * oname_src = NULL;
+char * oname_dst = NULL;
+char * str_flag = NULL;
/*-------------------------------------------------------------------------
* Function: leave
@@ -242,19 +242,19 @@ main(int argc, char *argv[])
} /* end if */
/* parse command line options */
- while ((opt = H5_get_option(argc, (const char *const *)argv, s_opts, l_opts)) != EOF) {
+ while ((opt = get_option(argc, (const char *const *)argv, s_opts, l_opts)) != EOF) {
switch ((char)opt) {
case 'd':
- oname_dst = HDstrdup(H5_optarg);
+ oname_dst = HDstrdup(opt_arg);
break;
case 'f':
/* validate flag */
- if (parse_flag(H5_optarg, &flag) < 0) {
+ if (parse_flag(opt_arg, &flag) < 0) {
usage();
leave(EXIT_FAILURE);
}
- str_flag = HDstrdup(H5_optarg);
+ str_flag = HDstrdup(opt_arg);
break;
case 'h':
@@ -263,11 +263,11 @@ main(int argc, char *argv[])
break;
case 'i':
- fname_src = HDstrdup(H5_optarg);
+ fname_src = HDstrdup(opt_arg);
break;
case 'o':
- fname_dst = HDstrdup(H5_optarg);
+ fname_dst = HDstrdup(opt_arg);
break;
case 'p':
@@ -275,7 +275,7 @@ main(int argc, char *argv[])
break;
case 's':
- oname_src = HDstrdup(H5_optarg);
+ oname_src = HDstrdup(opt_arg);
break;
case 'V':
diff --git a/tools/src/h5diff/h5diff_common.c b/tools/src/h5diff/h5diff_common.c
index c7060e9..9e1b6ed 100644
--- a/tools/src/h5diff/h5diff_common.c
+++ b/tools/src/h5diff/h5diff_common.c
@@ -25,24 +25,24 @@ static int check_d_input(const char *);
* Command-line options: The user can specify short or long-named
* parameters.
*/
-static const char * s_opts = "hVrv*qn:d:p:NcelxE:A:S";
-static struct h5_long_options l_opts[] = {{"help", no_arg, 'h'},
- {"version", no_arg, 'V'},
- {"report", no_arg, 'r'},
- {"verbose", optional_arg, 'v'},
- {"quiet", no_arg, 'q'},
- {"count", require_arg, 'n'},
- {"delta", require_arg, 'd'},
- {"relative", require_arg, 'p'},
- {"nan", no_arg, 'N'},
- {"compare", no_arg, 'c'},
- {"use-system-epsilon", no_arg, 'e'},
- {"follow-symlinks", no_arg, 'l'},
- {"no-dangling-links", no_arg, 'x'},
- {"exclude-path", require_arg, 'E'},
- {"exclude-attribute", require_arg, 'A'},
- {"enable-error-stack", no_arg, 'S'},
- {NULL, 0, '\0'}};
+static const char * s_opts = "hVrv*qn:d:p:NcelxE:A:S";
+static struct long_options l_opts[] = {{"help", no_arg, 'h'},
+ {"version", no_arg, 'V'},
+ {"report", no_arg, 'r'},
+ {"verbose", optional_arg, 'v'},
+ {"quiet", no_arg, 'q'},
+ {"count", require_arg, 'n'},
+ {"delta", require_arg, 'd'},
+ {"relative", require_arg, 'p'},
+ {"nan", no_arg, 'N'},
+ {"compare", no_arg, 'c'},
+ {"use-system-epsilon", no_arg, 'e'},
+ {"follow-symlinks", no_arg, 'l'},
+ {"no-dangling-links", no_arg, 'x'},
+ {"exclude-path", require_arg, 'E'},
+ {"exclude-attribute", require_arg, 'A'},
+ {"enable-error-stack", no_arg, 'S'},
+ {NULL, 0, '\0'}};
/*-------------------------------------------------------------------------
* Function: check_options
@@ -226,7 +226,7 @@ parse_command_line(int argc, const char *const *argv, const char **fname1, const
exclude_attr_head = NULL;
/* parse command line options */
- while ((opt = H5_get_option(argc, argv, s_opts, l_opts)) != EOF) {
+ while ((opt = get_option(argc, argv, s_opts, l_opts)) != EOF) {
switch ((char)opt) {
default:
usage();
@@ -250,20 +250,20 @@ parse_command_line(int argc, const char *const *argv, const char **fname1, const
* special check for short opt
*/
if (!strcmp(argv[i], "-v")) {
- if (H5_optarg != NULL)
- H5_optind--;
+ if (opt_arg != NULL)
+ opt_ind--;
opts->mode_verbose_level = 0;
break;
}
else if (!strncmp(argv[i], "-v", (size_t)2)) {
- if (H5_optarg != NULL)
- H5_optind--;
+ if (opt_arg != NULL)
+ opt_ind--;
opts->mode_verbose_level = atoi(&argv[i][2]);
break;
}
else {
- if (H5_optarg != NULL)
- opts->mode_verbose_level = HDatoi(H5_optarg);
+ if (opt_arg != NULL)
+ opts->mode_verbose_level = HDatoi(opt_arg);
else
opts->mode_verbose_level = 0;
}
@@ -302,7 +302,7 @@ parse_command_line(int argc, const char *const *argv, const char **fname1, const
}
/* init */
- exclude_node->obj_path = H5_optarg;
+ exclude_node->obj_path = opt_arg;
exclude_node->obj_type = H5TRAV_TYPE_UNKNOWN;
exclude_prev = exclude_head;
@@ -330,7 +330,7 @@ parse_command_line(int argc, const char *const *argv, const char **fname1, const
}
/* init */
- exclude_attr_node->obj_path = H5_optarg;
+ exclude_attr_node->obj_path = opt_arg;
exclude_attr_node->obj_type = H5TRAV_TYPE_UNKNOWN;
exclude_attr_prev = exclude_attr_head;
@@ -350,23 +350,23 @@ parse_command_line(int argc, const char *const *argv, const char **fname1, const
case 'd':
opts->delta_bool = 1;
- if (check_d_input(H5_optarg) == -1) {
- HDprintf("<-d %s> is not a valid option\n", H5_optarg);
+ if (check_d_input(opt_arg) == -1) {
+ HDprintf("<-d %s> is not a valid option\n", opt_arg);
usage();
h5diff_exit(EXIT_FAILURE);
}
- opts->delta = HDatof(H5_optarg);
+ opts->delta = HDatof(opt_arg);
/* do not check against default, the DBL_EPSILON is being replaced by user */
break;
case 'p':
opts->percent_bool = 1;
- if (check_p_input(H5_optarg) == -1) {
- HDprintf("<-p %s> is not a valid option\n", H5_optarg);
+ if (check_p_input(opt_arg) == -1) {
+ HDprintf("<-p %s> is not a valid option\n", opt_arg);
usage();
h5diff_exit(EXIT_FAILURE);
}
- opts->percent = HDatof(H5_optarg);
+ opts->percent = HDatof(opt_arg);
/* -p 0 is the same as default */
if (H5_DBL_ABS_EQUAL(opts->percent, 0.0))
@@ -375,12 +375,12 @@ parse_command_line(int argc, const char *const *argv, const char **fname1, const
case 'n':
opts->count_bool = 1;
- if (check_n_input(H5_optarg) == -1) {
- HDprintf("<-n %s> is not a valid option\n", H5_optarg);
+ if (check_n_input(opt_arg) == -1) {
+ HDprintf("<-n %s> is not a valid option\n", opt_arg);
usage();
h5diff_exit(EXIT_FAILURE);
}
- opts->count = HDstrtoull(H5_optarg, NULL, 0);
+ opts->count = HDstrtoull(opt_arg, NULL, 0);
break;
case 'N':
@@ -409,15 +409,15 @@ parse_command_line(int argc, const char *const *argv, const char **fname1, const
opts->exclude_attr = exclude_attr_head;
/* check for file names to be processed */
- if (argc <= H5_optind || argv[H5_optind + 1] == NULL) {
+ if (argc <= opt_ind || argv[opt_ind + 1] == NULL) {
error_msg("missing file names\n");
usage();
h5diff_exit(EXIT_FAILURE);
}
- *fname1 = argv[H5_optind];
- *fname2 = argv[H5_optind + 1];
- *objname1 = argv[H5_optind + 2];
+ *fname1 = argv[opt_ind];
+ *fname2 = argv[opt_ind + 1];
+ *objname1 = argv[opt_ind + 2];
H5TOOLS_DEBUG("file1 = %s", *fname1);
H5TOOLS_DEBUG("file2 = %s", *fname2);
@@ -428,8 +428,8 @@ parse_command_line(int argc, const char *const *argv, const char **fname1, const
}
H5TOOLS_DEBUG("objname1 = %s", *objname1);
- if (argv[H5_optind + 3] != NULL) {
- *objname2 = argv[H5_optind + 3];
+ if (argv[opt_ind + 3] != NULL) {
+ *objname2 = argv[opt_ind + 3];
}
else {
*objname2 = *objname1;
diff --git a/tools/src/h5dump/h5dump.c b/tools/src/h5dump/h5dump.c
index dfab35d..1134ecb 100644
--- a/tools/src/h5dump/h5dump.c
+++ b/tools/src/h5dump/h5dump.c
@@ -77,51 +77,51 @@ struct handler_t {
*/
/* The following initialization makes use of C language concatenating */
/* "xxx" "yyy" into "xxxyyy". */
-static const char * s_opts = "a:b*c:d:ef:g:hik:l:m:n*o*pq:rs:t:uvw:xyz:A*BCD:E*F:G:HM:N:O*RS:VX:";
-static struct h5_long_options l_opts[] = {{"attribute", require_arg, 'a'},
- {"binary", optional_arg, 'b'},
- {"count", require_arg, 'c'},
- {"dataset", require_arg, 'd'},
- {"escape", no_arg, 'e'},
- {"filedriver", require_arg, 'f'},
- {"group", require_arg, 'g'},
- {"help", no_arg, 'h'},
- {"object-ids", no_arg, 'i'},
- {"block", require_arg, 'k'},
- {"soft-link", require_arg, 'l'},
- {"format", require_arg, 'm'},
- {"contents", optional_arg, 'n'},
- {"output", optional_arg, 'o'},
- {"properties", no_arg, 'p'},
- {"sort_by", require_arg, 'q'},
- {"string", no_arg, 'r'},
- {"start", require_arg, 's'},
- {"datatype", require_arg, 't'},
- {"use-dtd", no_arg, 'u'},
- {"vds-view-first-missing", no_arg, 'v'},
- {"width", require_arg, 'w'},
- {"xml", no_arg, 'x'},
- {"noindex", no_arg, 'y'},
- {"sort_order", require_arg, 'z'},
- {"onlyattr", optional_arg, 'A'},
- {"superblock", no_arg, 'B'},
- {"boot-block", no_arg, 'B'},
- {"no-compact-subset", no_arg, 'C'},
- {"xml-dtd", require_arg, 'D'},
- {"enable-error-stack", optional_arg, 'E'},
- {"form", require_arg, 'F'},
- {"vds-gap-size", require_arg, 'G'},
- {"header", no_arg, 'H'},
- {"packed-bits", require_arg, 'M'},
- {"any_path", require_arg, 'N'},
- {"ddl", optional_arg, 'O'},
- {"region", no_arg, 'R'},
- {"stride", require_arg, 'S'},
- {"version", no_arg, 'V'},
- {"xml-ns", require_arg, 'X'},
- {"s3-cred", require_arg, '$'},
- {"hdfs-attrs", require_arg, '#'},
- {NULL, 0, '\0'}};
+static const char * s_opts = "a:b*c:d:ef:g:hik:l:m:n*o*pq:rs:t:uvw:xyz:A*BCD:E*F:G:HM:N:O*RS:VX:";
+static struct long_options l_opts[] = {{"attribute", require_arg, 'a'},
+ {"binary", optional_arg, 'b'},
+ {"count", require_arg, 'c'},
+ {"dataset", require_arg, 'd'},
+ {"escape", no_arg, 'e'},
+ {"filedriver", require_arg, 'f'},
+ {"group", require_arg, 'g'},
+ {"help", no_arg, 'h'},
+ {"object-ids", no_arg, 'i'},
+ {"block", require_arg, 'k'},
+ {"soft-link", require_arg, 'l'},
+ {"format", require_arg, 'm'},
+ {"contents", optional_arg, 'n'},
+ {"output", optional_arg, 'o'},
+ {"properties", no_arg, 'p'},
+ {"sort_by", require_arg, 'q'},
+ {"string", no_arg, 'r'},
+ {"start", require_arg, 's'},
+ {"datatype", require_arg, 't'},
+ {"use-dtd", no_arg, 'u'},
+ {"vds-view-first-missing", no_arg, 'v'},
+ {"width", require_arg, 'w'},
+ {"xml", no_arg, 'x'},
+ {"noindex", no_arg, 'y'},
+ {"sort_order", require_arg, 'z'},
+ {"onlyattr", optional_arg, 'A'},
+ {"superblock", no_arg, 'B'},
+ {"boot-block", no_arg, 'B'},
+ {"no-compact-subset", no_arg, 'C'},
+ {"xml-dtd", require_arg, 'D'},
+ {"enable-error-stack", optional_arg, 'E'},
+ {"form", require_arg, 'F'},
+ {"vds-gap-size", require_arg, 'G'},
+ {"header", no_arg, 'H'},
+ {"packed-bits", require_arg, 'M'},
+ {"any_path", require_arg, 'N'},
+ {"ddl", optional_arg, 'O'},
+ {"region", no_arg, 'R'},
+ {"stride", require_arg, 'S'},
+ {"version", no_arg, 'V'},
+ {"xml-ns", require_arg, 'X'},
+ {"s3-cred", require_arg, '$'},
+ {"hdfs-attrs", require_arg, '#'},
+ {NULL, 0, '\0'}};
/*-------------------------------------------------------------------------
* Function: leave
@@ -821,7 +821,7 @@ parse_command_line(int argc, const char *const *argv)
}
/* parse command line options */
- while ((opt = H5_get_option(argc, argv, s_opts, l_opts)) != EOF) {
+ while ((opt = get_option(argc, argv, s_opts, l_opts)) != EOF) {
parse_start:
switch ((char)opt) {
case 'R':
@@ -835,8 +835,8 @@ parse_start:
case 'n':
dump_opts.display_fi = TRUE;
last_was_dset = FALSE;
- if (H5_optarg != NULL)
- h5trav_set_verbose(HDatoi(H5_optarg));
+ if (opt_arg != NULL)
+ h5trav_set_verbose(HDatoi(opt_arg));
break;
case 'p':
dump_opts.display_dcpl = TRUE;
@@ -853,8 +853,8 @@ parse_start:
last_was_dset = FALSE;
break;
case 'A':
- if (H5_optarg != NULL) {
- if (0 == HDatoi(H5_optarg))
+ if (opt_arg != NULL) {
+ if (0 == HDatoi(opt_arg))
dump_opts.include_attrs = FALSE;
}
else {
@@ -878,7 +878,7 @@ parse_start:
goto done;
break;
case 'w': {
- int sh5tools_nCols = HDatoi(H5_optarg);
+ int sh5tools_nCols = HDatoi(opt_arg);
if (sh5tools_nCols <= 0)
h5tools_nCols = 65535;
@@ -892,7 +892,7 @@ parse_start:
for (i = 0; i < argc; i++)
if (!hand[i].func) {
hand[i].func = handle_paths;
- hand[i].obj = HDstrdup(H5_optarg);
+ hand[i].obj = HDstrdup(opt_arg);
break;
}
@@ -904,7 +904,7 @@ parse_start:
for (i = 0; i < argc; i++)
if (!hand[i].func) {
hand[i].func = handle_attributes;
- hand[i].obj = HDstrdup(H5_optarg);
+ hand[i].obj = HDstrdup(opt_arg);
break;
}
@@ -916,7 +916,7 @@ parse_start:
for (i = 0; i < argc; i++)
if (!hand[i].func) {
hand[i].func = handle_datasets;
- hand[i].obj = HDstrdup(H5_optarg);
+ hand[i].obj = HDstrdup(opt_arg);
hand[i].subset_info = parse_subset_params(hand[i].obj);
last_dset = &hand[i];
break;
@@ -925,7 +925,7 @@ parse_start:
last_was_dset = TRUE;
break;
case 'f':
- driver_name_g = H5_optarg;
+ driver_name_g = opt_arg;
break;
case 'g':
dump_opts.display_all = 0;
@@ -933,7 +933,7 @@ parse_start:
for (i = 0; i < argc; i++)
if (!hand[i].func) {
hand[i].func = handle_groups;
- hand[i].obj = HDstrdup(H5_optarg);
+ hand[i].obj = HDstrdup(opt_arg);
break;
}
@@ -945,7 +945,7 @@ parse_start:
for (i = 0; i < argc; i++)
if (!hand[i].func) {
hand[i].func = handle_links;
- hand[i].obj = HDstrdup(H5_optarg);
+ hand[i].obj = HDstrdup(opt_arg);
break;
}
@@ -957,7 +957,7 @@ parse_start:
for (i = 0; i < argc; i++)
if (!hand[i].func) {
hand[i].func = handle_datatypes;
- hand[i].obj = HDstrdup(H5_optarg);
+ hand[i].obj = HDstrdup(opt_arg);
break;
}
@@ -965,7 +965,7 @@ parse_start:
break;
case 'O':
- if (h5tools_set_output_file(H5_optarg, 0) < 0) {
+ if (h5tools_set_output_file(opt_arg, 0) < 0) {
usage(h5tools_getprogname());
goto error;
}
@@ -973,20 +973,20 @@ parse_start:
case 'o':
if (bin_output) {
- if (h5tools_set_data_output_file(H5_optarg, 1) < 0) {
+ if (h5tools_set_data_output_file(opt_arg, 1) < 0) {
usage(h5tools_getprogname());
goto error;
}
}
else {
if (dump_opts.display_attr_data && !dump_opts.display_data) {
- if (h5tools_set_attr_output_file(H5_optarg, 0) < 0) {
+ if (h5tools_set_attr_output_file(opt_arg, 0) < 0) {
usage(h5tools_getprogname());
goto error;
}
}
if (dump_opts.display_data || dump_opts.display_all) {
- if (h5tools_set_data_output_file(H5_optarg, 0) < 0) {
+ if (h5tools_set_data_output_file(opt_arg, 0) < 0) {
usage(h5tools_getprogname());
goto error;
}
@@ -995,12 +995,12 @@ parse_start:
dump_opts.usingdasho = TRUE;
last_was_dset = FALSE;
- outfname_g = H5_optarg;
+ outfname_g = opt_arg;
break;
case 'b':
- if (H5_optarg != NULL) {
- if ((bin_form = set_binary_form(H5_optarg)) < 0) {
+ if (opt_arg != NULL) {
+ if ((bin_form = set_binary_form(opt_arg)) < 0) {
/* failed to set binary form */
usage(h5tools_getprogname());
goto error;
@@ -1019,7 +1019,7 @@ parse_start:
break;
case 'q':
- if ((sort_by = set_sort_by(H5_optarg)) < 0) {
+ if ((sort_by = set_sort_by(opt_arg)) < 0) {
/* failed to set "sort by" form */
usage(h5tools_getprogname());
goto error;
@@ -1027,7 +1027,7 @@ parse_start:
break;
case 'z':
- if ((sort_order = set_sort_order(H5_optarg)) < 0) {
+ if ((sort_order = set_sort_order(opt_arg)) < 0) {
/* failed to set "sort order" form */
usage(h5tools_getprogname());
goto error;
@@ -1039,7 +1039,7 @@ parse_start:
error_msg("option \"-%c\" can only be used after --dataset option\n", opt);
goto error;
}
- if (parse_mask_list(H5_optarg) != SUCCEED) {
+ if (parse_mask_list(opt_arg) != SUCCEED) {
usage(h5tools_getprogname());
goto error;
}
@@ -1049,7 +1049,7 @@ parse_start:
dump_opts.display_vds_first = TRUE;
break;
case 'G':
- dump_opts.vds_gap_size = HDatoi(H5_optarg);
+ dump_opts.vds_gap_size = HDatoi(opt_arg);
if (dump_opts.vds_gap_size < 0) {
usage(h5tools_getprogname());
goto error;
@@ -1076,13 +1076,13 @@ parse_start:
case 'D':
/* specify alternative XML DTD or schema */
/* To Do: check format of this value? */
- xml_dtd_uri_g = H5_optarg;
+ xml_dtd_uri_g = opt_arg;
h5tools_nCols = 0;
break;
case 'm':
/* specify alternative floating point printing format */
- fp_format = H5_optarg;
+ fp_format = opt_arg;
h5tools_nCols = 0;
break;
@@ -1093,10 +1093,10 @@ parse_start:
usage(h5tools_getprogname());
goto error;
}
- if (HDstrcmp(H5_optarg, ":") == 0)
+ if (HDstrcmp(opt_arg, ":") == 0)
xmlnsprefix = "";
else
- xmlnsprefix = H5_optarg;
+ xmlnsprefix = opt_arg;
h5tools_nCols = 0;
break;
/** end XML parameters **/
@@ -1142,33 +1142,33 @@ parse_start:
HDfree(s->start.data);
s->start.data = NULL;
}
- parse_hsize_list(H5_optarg, &s->start);
+ parse_hsize_list(opt_arg, &s->start);
break;
case 'S':
if (s->stride.data) {
HDfree(s->stride.data);
s->stride.data = NULL;
}
- parse_hsize_list(H5_optarg, &s->stride);
+ parse_hsize_list(opt_arg, &s->stride);
break;
case 'c':
if (s->count.data) {
HDfree(s->count.data);
s->count.data = NULL;
}
- parse_hsize_list(H5_optarg, &s->count);
+ parse_hsize_list(opt_arg, &s->count);
break;
case 'k':
if (s->block.data) {
HDfree(s->block.data);
s->block.data = NULL;
}
- parse_hsize_list(H5_optarg, &s->block);
+ parse_hsize_list(opt_arg, &s->block);
break;
default:
goto end_collect;
}
- } while ((opt = H5_get_option(argc, argv, s_opts, l_opts)) != EOF);
+ } while ((opt = get_option(argc, argv, s_opts, l_opts)) != EOF);
end_collect:
last_was_dset = FALSE;
@@ -1181,8 +1181,8 @@ end_collect:
/** end subsetting parameters **/
case 'E':
- if (H5_optarg != NULL)
- enable_error_stack = HDatoi(H5_optarg);
+ if (opt_arg != NULL)
+ enable_error_stack = HDatoi(opt_arg);
else
enable_error_stack = 1;
break;
@@ -1198,7 +1198,7 @@ end_collect:
case '$':
#ifdef H5_HAVE_ROS3_VFD
- if (h5tools_parse_ros3_fapl_tuple(H5_optarg, ',', &ros3_fa_g) < 0) {
+ if (h5tools_parse_ros3_fapl_tuple(opt_arg, ',', &ros3_fa_g) < 0) {
error_msg("failed to parse S3 VFD credential info\n");
usage(h5tools_getprogname());
free_handler(hand, argc);
@@ -1215,7 +1215,7 @@ end_collect:
case '#':
#ifdef H5_HAVE_LIBHDFS
- if (h5tools_parse_hdfs_fapl_tuple(H5_optarg, ',', &hdfs_fa_g) < 0) {
+ if (h5tools_parse_hdfs_fapl_tuple(opt_arg, ',', &hdfs_fa_g) < 0) {
error_msg("failed to parse HDFS VFD configuration info\n");
usage(h5tools_getprogname());
free_handler(hand, argc);
@@ -1239,7 +1239,7 @@ end_collect:
parse_end:
/* check for file name to be processed */
- if (argc <= H5_optind) {
+ if (argc <= opt_ind) {
error_msg("missing file name\n");
usage(h5tools_getprogname());
goto error;
@@ -1331,7 +1331,7 @@ main(int argc, char *argv[])
}
}
- if (argc <= H5_optind) {
+ if (argc <= opt_ind) {
error_msg("missing file name\n");
usage(h5tools_getprogname());
h5tools_setstatus(EXIT_FAILURE);
@@ -1376,8 +1376,8 @@ main(int argc, char *argv[])
}
} /* driver name defined */
- while (H5_optind < argc) {
- fname = HDstrdup(argv[H5_optind++]);
+ while (opt_ind < argc) {
+ fname = HDstrdup(argv[opt_ind++]);
fid = h5tools_fopen(fname, H5F_ACC_RDONLY, fapl_id, (fapl_id == H5P_DEFAULT) ? FALSE : TRUE, NULL, 0);
diff --git a/tools/src/h5dump/h5dump_ddl.c b/tools/src/h5dump/h5dump_ddl.c
index 8d5a4a8..3a9a939 100644
--- a/tools/src/h5dump/h5dump_ddl.c
+++ b/tools/src/h5dump/h5dump_ddl.c
@@ -1264,7 +1264,7 @@ dump_fcontents(hid_t fid)
{
PRINTSTREAM(rawoutstream, "%s %s\n", FILE_CONTENTS, BEGIN);
- /* special case of unamed types in root group */
+ /* special case of unnamed types in root group */
if (unamedtype) {
unsigned u;
@@ -1933,7 +1933,7 @@ handle_datatypes(hid_t fid, const char *type, void H5_ATTR_UNUSED *data, int pe,
char name[128];
if (!type_table->objs[idx].recorded) {
- /* unamed datatype */
+ /* unnamed datatype */
HDsprintf(name, "/#" H5_PRINTF_HADDR_FMT, type_table->objs[idx].objno);
if (!HDstrcmp(name, real_name))
diff --git a/tools/src/h5format_convert/h5format_convert.c b/tools/src/h5format_convert/h5format_convert.c
index 479d6d4..508ea65 100644
--- a/tools/src/h5format_convert/h5format_convert.c
+++ b/tools/src/h5format_convert/h5format_convert.c
@@ -38,11 +38,11 @@ static int verbose_g = 0;
* Command-line options: The user can specify short or long-named
* parameters.
*/
-static const char * s_opts = "hVvd:n";
-static struct h5_long_options l_opts[] = {{"help", no_arg, 'h'}, {"version", no_arg, 'V'},
- {"verbose", no_arg, 'v'}, {"dname", require_arg, 'd'},
- {"noop", no_arg, 'n'}, {"enable-error-stack", no_arg, 'E'},
- {NULL, 0, '\0'}};
+static const char * s_opts = "hVvd:n";
+static struct long_options l_opts[] = {{"help", no_arg, 'h'}, {"version", no_arg, 'V'},
+ {"verbose", no_arg, 'v'}, {"dname", require_arg, 'd'},
+ {"noop", no_arg, 'n'}, {"enable-error-stack", no_arg, 'E'},
+ {NULL, 0, '\0'}};
/*-------------------------------------------------------------------------
* Function: usage
@@ -106,7 +106,7 @@ parse_command_line(int argc, const char *const *argv)
}
/* parse command line options */
- while ((opt = H5_get_option(argc, argv, s_opts, l_opts)) != EOF) {
+ while ((opt = get_option(argc, argv, s_opts, l_opts)) != EOF) {
switch ((char)opt) {
case 'h':
usage(h5tools_getprogname());
@@ -123,11 +123,11 @@ parse_command_line(int argc, const char *const *argv)
break;
case 'd': /* -d dname */
- if (H5_optarg != NULL && *H5_optarg)
- dname_g = HDstrdup(H5_optarg);
+ if (opt_arg != NULL && *opt_arg)
+ dname_g = HDstrdup(opt_arg);
if (dname_g == NULL) {
h5tools_setstatus(EXIT_FAILURE);
- error_msg("No dataset name\n", H5_optarg);
+ error_msg("No dataset name\n", opt_arg);
usage(h5tools_getprogname());
goto error;
}
@@ -150,14 +150,14 @@ parse_command_line(int argc, const char *const *argv)
} /* switch */
} /* while */
- if (argc <= H5_optind) {
+ if (argc <= opt_ind) {
error_msg("missing file name\n");
usage(h5tools_getprogname());
h5tools_setstatus(EXIT_FAILURE);
goto error;
}
- fname_g = HDstrdup(argv[H5_optind]);
+ fname_g = HDstrdup(argv[opt_ind]);
return 0;
diff --git a/tools/src/h5jam/h5jam.c b/tools/src/h5jam/h5jam.c
index c3dfa8e..35e61c5 100644
--- a/tools/src/h5jam/h5jam.c
+++ b/tools/src/h5jam/h5jam.c
@@ -34,10 +34,10 @@ char *ub_file = NULL;
* parameters. The long-named ones can be partially spelled. When
* adding more, make sure that they don't clash with each other.
*/
-static const char * s_opts = "hi:u:o:c:V";
-static struct h5_long_options l_opts[] = {{"help", no_arg, 'h'}, {"i", require_arg, 'i'},
- {"u", require_arg, 'u'}, {"o", require_arg, 'o'},
- {"clobber", no_arg, 'c'}, {NULL, 0, '\0'}};
+static const char * s_opts = "hi:u:o:c:V";
+static struct long_options l_opts[] = {{"help", no_arg, 'h'}, {"i", require_arg, 'i'},
+ {"u", require_arg, 'u'}, {"o", require_arg, 'o'},
+ {"clobber", no_arg, 'c'}, {NULL, 0, '\0'}};
/*-------------------------------------------------------------------------
* Function: usage
@@ -109,16 +109,16 @@ parse_command_line(int argc, const char *const *argv)
int opt = FALSE;
/* parse command line options */
- while ((opt = H5_get_option(argc, argv, s_opts, l_opts)) != EOF) {
+ while ((opt = get_option(argc, argv, s_opts, l_opts)) != EOF) {
switch ((char)opt) {
case 'o':
- output_file = HDstrdup(H5_optarg);
+ output_file = HDstrdup(opt_arg);
break;
case 'i':
- input_file = HDstrdup(H5_optarg);
+ input_file = HDstrdup(opt_arg);
break;
case 'u':
- ub_file = HDstrdup(H5_optarg);
+ ub_file = HDstrdup(opt_arg);
break;
case 'c':
do_clobber = TRUE;
diff --git a/tools/src/h5jam/h5unjam.c b/tools/src/h5jam/h5unjam.c
index 38f0a0c..001e48f 100644
--- a/tools/src/h5jam/h5unjam.c
+++ b/tools/src/h5jam/h5unjam.c
@@ -35,10 +35,10 @@ char *ub_file = NULL;
* parameters. The long-named ones can be partially spelled. When
* adding more, make sure that they don't clash with each other.
*/
-static const char * s_opts = "hu:i:o:d:V";
-static struct h5_long_options l_opts[] = {{"help", no_arg, 'h'}, {"i", require_arg, 'i'},
- {"u", require_arg, 'u'}, {"o", require_arg, 'o'},
- {"delete", no_arg, 'd'}, {NULL, 0, '\0'}};
+static const char * s_opts = "hu:i:o:d:V";
+static struct long_options l_opts[] = {{"help", no_arg, 'h'}, {"i", require_arg, 'i'},
+ {"u", require_arg, 'u'}, {"o", require_arg, 'o'},
+ {"delete", no_arg, 'd'}, {NULL, 0, '\0'}};
/*-------------------------------------------------------------------------
* Function: usage
@@ -97,23 +97,23 @@ parse_command_line(int argc, const char *const *argv)
int opt = FALSE;
/* parse command line options */
- while ((opt = H5_get_option(argc, argv, s_opts, l_opts)) != EOF) {
+ while ((opt = get_option(argc, argv, s_opts, l_opts)) != EOF) {
switch ((char)opt) {
case 'o':
- output_file = HDstrdup(H5_optarg);
+ output_file = HDstrdup(opt_arg);
if (output_file)
h5tools_set_data_output_file(output_file, 1);
break;
case 'i':
- input_file = HDstrdup(H5_optarg);
+ input_file = HDstrdup(opt_arg);
if (input_file)
h5tools_set_input_file(input_file, 1);
break;
;
case 'u':
- ub_file = HDstrdup(H5_optarg);
+ ub_file = HDstrdup(opt_arg);
if (ub_file)
h5tools_set_output_file(ub_file, 1);
else
diff --git a/tools/src/h5perf/pio_perf.c b/tools/src/h5perf/pio_perf.c
index 560512c..01165bb 100644
--- a/tools/src/h5perf/pio_perf.c
+++ b/tools/src/h5perf/pio_perf.c
@@ -129,31 +129,31 @@ static const char *s_opts = "a:A:B:cCd:D:e:F:ghi:Imno:p:P:stT:wx:X:";
#else
static const char *s_opts = "a:A:bB:cCd:D:e:F:ghi:Imno:p:P:stT:wx:X:";
#endif /* 1 */
-static struct h5_long_options l_opts[] = {{"align", require_arg, 'a'},
- {"api", require_arg, 'A'},
+static struct long_options l_opts[] = {{"align", require_arg, 'a'},
+ {"api", require_arg, 'A'},
#if 0
/* a sighting of the elusive binary option */
{ "binary", no_arg, 'b' },
#endif /* 0 */
- {"block-size", require_arg, 'B'},
- {"chunk", no_arg, 'c'},
- {"collective", no_arg, 'C'},
- {"debug", require_arg, 'D'},
- {"geometry", no_arg, 'g'},
- {"help", no_arg, 'h'},
- {"interleaved", require_arg, 'I'},
- {"max-num-processes", require_arg, 'P'},
- {"min-num-processes", require_arg, 'p'},
- {"max-xfer-size", require_arg, 'X'},
- {"min-xfer-size", require_arg, 'x'},
- {"num-bytes", require_arg, 'e'},
- {"num-dsets", require_arg, 'd'},
- {"num-files", require_arg, 'F'},
- {"num-iterations", require_arg, 'i'},
- {"output", require_arg, 'o'},
- {"threshold", require_arg, 'T'},
- {"write-only", require_arg, 'w'},
- {NULL, 0, '\0'}};
+ {"block-size", require_arg, 'B'},
+ {"chunk", no_arg, 'c'},
+ {"collective", no_arg, 'C'},
+ {"debug", require_arg, 'D'},
+ {"geometry", no_arg, 'g'},
+ {"help", no_arg, 'h'},
+ {"interleaved", require_arg, 'I'},
+ {"max-num-processes", require_arg, 'P'},
+ {"min-num-processes", require_arg, 'p'},
+ {"max-xfer-size", require_arg, 'X'},
+ {"min-xfer-size", require_arg, 'x'},
+ {"num-bytes", require_arg, 'e'},
+ {"num-dsets", require_arg, 'd'},
+ {"num-files", require_arg, 'F'},
+ {"num-iterations", require_arg, 'i'},
+ {"output", require_arg, 'o'},
+ {"threshold", require_arg, 'T'},
+ {"write-only", require_arg, 'w'},
+ {NULL, 0, '\0'}};
struct options {
long io_types; /* bitmask of which I/O types to test */
@@ -1305,13 +1305,13 @@ parse_command_line(int argc, const char *const *argv)
cl_opts->h5_write_only = FALSE; /* Do both read and write by default */
cl_opts->verify = FALSE; /* No Verify data correctness by default */
- while ((opt = H5_get_option(argc, argv, s_opts, l_opts)) != EOF) {
+ while ((opt = get_option(argc, argv, s_opts, l_opts)) != EOF) {
switch ((char)opt) {
case 'a':
- cl_opts->h5_alignment = parse_size_directive(H5_optarg);
+ cl_opts->h5_alignment = parse_size_directive(opt_arg);
break;
case 'A': {
- const char *end = H5_optarg;
+ const char *end = opt_arg;
while (end && *end != '\0') {
char buf[10];
@@ -1351,7 +1351,7 @@ parse_command_line(int argc, const char *const *argv)
break;
#endif /* 0 */
case 'B':
- cl_opts->blk_size = (size_t)parse_size_directive(H5_optarg);
+ cl_opts->blk_size = (size_t)parse_size_directive(opt_arg);
break;
case 'c':
/* Turn on chunked HDF5 dataset creation */
@@ -1361,10 +1361,10 @@ parse_command_line(int argc, const char *const *argv)
cl_opts->collective = 1;
break;
case 'd':
- cl_opts->num_dsets = atoi(H5_optarg);
+ cl_opts->num_dsets = atoi(opt_arg);
break;
case 'D': {
- const char *end = H5_optarg;
+ const char *end = opt_arg;
while (end && *end != '\0') {
char buf[10];
@@ -1421,40 +1421,40 @@ parse_command_line(int argc, const char *const *argv)
break;
case 'e':
- cl_opts->num_bpp = parse_size_directive(H5_optarg);
+ cl_opts->num_bpp = parse_size_directive(opt_arg);
break;
case 'F':
- cl_opts->num_files = HDatoi(H5_optarg);
+ cl_opts->num_files = HDatoi(opt_arg);
break;
case 'g':
cl_opts->dim2d = 1;
break;
case 'i':
- cl_opts->num_iters = HDatoi(H5_optarg);
+ cl_opts->num_iters = HDatoi(opt_arg);
break;
case 'I':
cl_opts->interleaved = 1;
break;
case 'o':
- cl_opts->output_file = H5_optarg;
+ cl_opts->output_file = opt_arg;
break;
case 'p':
- cl_opts->min_num_procs = HDatoi(H5_optarg);
+ cl_opts->min_num_procs = HDatoi(opt_arg);
break;
case 'P':
- cl_opts->max_num_procs = HDatoi(H5_optarg);
+ cl_opts->max_num_procs = HDatoi(opt_arg);
break;
case 'T':
- cl_opts->h5_threshold = parse_size_directive(H5_optarg);
+ cl_opts->h5_threshold = parse_size_directive(opt_arg);
break;
case 'w':
cl_opts->h5_write_only = TRUE;
break;
case 'x':
- cl_opts->min_xfer_size = (size_t)parse_size_directive(H5_optarg);
+ cl_opts->min_xfer_size = (size_t)parse_size_directive(opt_arg);
break;
case 'X':
- cl_opts->max_xfer_size = (size_t)parse_size_directive(H5_optarg);
+ cl_opts->max_xfer_size = (size_t)parse_size_directive(opt_arg);
break;
case 'h':
case '?':
diff --git a/tools/src/h5perf/sio_perf.c b/tools/src/h5perf/sio_perf.c
index 625f313..c979e7a 100644
--- a/tools/src/h5perf/sio_perf.c
+++ b/tools/src/h5perf/sio_perf.c
@@ -97,35 +97,35 @@ static const char *progname = "h5perf_serial";
* It seems that only the options that accept additional information
* such as dataset size (-e) require the colon next to it.
*/
-static const char * s_opts = "a:A:B:c:Cd:D:e:F:ghi:Imno:p:P:r:stT:v:wx:X:";
-static struct h5_long_options l_opts[] = {{"align", require_arg, 'a'},
- {"api", require_arg, 'A'},
+static const char * s_opts = "a:A:B:c:Cd:D:e:F:ghi:Imno:p:P:r:stT:v:wx:X:";
+static struct long_options l_opts[] = {{"align", require_arg, 'a'},
+ {"api", require_arg, 'A'},
#if 0
/* a sighting of the elusive binary option */
{ "binary", no_arg, 'b' },
#endif /* 0 */
- {"block-size", require_arg, 'B'},
- {"chunk", no_arg, 'c'},
- {"collective", no_arg, 'C'},
- {"debug", require_arg, 'D'},
- {"file-driver", require_arg, 'v'},
- {"geometry", no_arg, 'g'},
- {"help", no_arg, 'h'},
- {"interleaved", require_arg, 'I'},
- {"max-num-processes", require_arg, 'P'},
- {"min-num-processes", require_arg, 'p'},
- {"max-xfer-size", require_arg, 'X'},
- {"min-xfer-size", require_arg, 'x'},
- {"num-bytes", require_arg, 'e'},
- {"num-dsets", require_arg, 'd'},
- {"num-files", require_arg, 'F'},
- {"num-iterations", require_arg, 'i'},
- {"order", require_arg, 'r'},
- {"output", require_arg, 'o'},
- {"extendable", no_arg, 't'},
- {"threshold", require_arg, 'T'},
- {"write-only", require_arg, 'w'},
- {NULL, 0, '\0'}};
+ {"block-size", require_arg, 'B'},
+ {"chunk", no_arg, 'c'},
+ {"collective", no_arg, 'C'},
+ {"debug", require_arg, 'D'},
+ {"file-driver", require_arg, 'v'},
+ {"geometry", no_arg, 'g'},
+ {"help", no_arg, 'h'},
+ {"interleaved", require_arg, 'I'},
+ {"max-num-processes", require_arg, 'P'},
+ {"min-num-processes", require_arg, 'p'},
+ {"max-xfer-size", require_arg, 'X'},
+ {"min-xfer-size", require_arg, 'x'},
+ {"num-bytes", require_arg, 'e'},
+ {"num-dsets", require_arg, 'd'},
+ {"num-files", require_arg, 'F'},
+ {"num-iterations", require_arg, 'i'},
+ {"order", require_arg, 'r'},
+ {"output", require_arg, 'o'},
+ {"extendable", no_arg, 't'},
+ {"threshold", require_arg, 'T'},
+ {"write-only", require_arg, 'w'},
+ {NULL, 0, '\0'}};
struct options {
long io_types; /* bitmask of which I/O types to test */
@@ -857,19 +857,19 @@ parse_command_line(int argc, const char *const *argv)
cl_opts->h5_extendable = FALSE; /* Use extendable dataset */
cl_opts->verify = FALSE; /* No Verify data correctness by default */
- while ((opt = H5_get_option(argc, argv, s_opts, l_opts)) != EOF) {
+ while ((opt = get_option(argc, argv, s_opts, l_opts)) != EOF) {
switch ((char)opt) {
case 'a':
- cl_opts->h5_alignment = parse_size_directive(H5_optarg);
+ cl_opts->h5_alignment = parse_size_directive(opt_arg);
break;
case 'G':
- cl_opts->page_size = parse_size_directive(H5_optarg);
+ cl_opts->page_size = parse_size_directive(opt_arg);
break;
case 'b':
- cl_opts->page_buffer_size = parse_size_directive(H5_optarg);
+ cl_opts->page_buffer_size = parse_size_directive(opt_arg);
break;
case 'A': {
- const char *end = H5_optarg;
+ const char *end = opt_arg;
while (end && *end != '\0') {
char buf[10];
@@ -907,7 +907,7 @@ parse_command_line(int argc, const char *const *argv)
/* Turn on chunked HDF5 dataset creation */
cl_opts->h5_use_chunks = 1;
{
- const char *end = H5_optarg;
+ const char *end = opt_arg;
int j = 0;
while (end && *end != '\0') {
@@ -934,7 +934,7 @@ parse_command_line(int argc, const char *const *argv)
break;
case 'D': {
- const char *end = H5_optarg;
+ const char *end = opt_arg;
while (end && *end != '\0') {
char buf[10];
@@ -990,7 +990,7 @@ parse_command_line(int argc, const char *const *argv)
break;
case 'e': {
- const char *end = H5_optarg;
+ const char *end = opt_arg;
int j = 0;
while (end && *end != '\0') {
@@ -1017,38 +1017,38 @@ parse_command_line(int argc, const char *const *argv)
break;
case 'i':
- cl_opts->num_iters = HDatoi(H5_optarg);
+ cl_opts->num_iters = HDatoi(opt_arg);
break;
case 'o':
- cl_opts->output_file = H5_optarg;
+ cl_opts->output_file = opt_arg;
break;
case 'T':
- cl_opts->h5_threshold = parse_size_directive(H5_optarg);
+ cl_opts->h5_threshold = parse_size_directive(opt_arg);
break;
case 'v':
- if (!HDstrcasecmp(H5_optarg, "sec2")) {
+ if (!HDstrcasecmp(opt_arg, "sec2")) {
cl_opts->vfd = sec2;
}
- else if (!HDstrcasecmp(H5_optarg, "stdio")) {
+ else if (!HDstrcasecmp(opt_arg, "stdio")) {
cl_opts->vfd = stdio;
}
- else if (!HDstrcasecmp(H5_optarg, "core")) {
+ else if (!HDstrcasecmp(opt_arg, "core")) {
cl_opts->vfd = core;
}
- else if (!HDstrcasecmp(H5_optarg, "split")) {
+ else if (!HDstrcasecmp(opt_arg, "split")) {
cl_opts->vfd = split;
}
- else if (!HDstrcasecmp(H5_optarg, "multi")) {
+ else if (!HDstrcasecmp(opt_arg, "multi")) {
cl_opts->vfd = multi;
}
- else if (!HDstrcasecmp(H5_optarg, "family")) {
+ else if (!HDstrcasecmp(opt_arg, "family")) {
cl_opts->vfd = family;
}
- else if (!HDstrcasecmp(H5_optarg, "direct")) {
+ else if (!HDstrcasecmp(opt_arg, "direct")) {
cl_opts->vfd = direct;
}
else {
- HDfprintf(stderr, "sio_perf: invalid --api option %s\n", H5_optarg);
+ HDfprintf(stderr, "sio_perf: invalid --api option %s\n", opt_arg);
HDexit(EXIT_FAILURE);
}
break;
@@ -1059,7 +1059,7 @@ parse_command_line(int argc, const char *const *argv)
cl_opts->h5_extendable = TRUE;
break;
case 'x': {
- const char *end = H5_optarg;
+ const char *end = opt_arg;
int j = 0;
while (end && *end != '\0') {
@@ -1086,7 +1086,7 @@ parse_command_line(int argc, const char *const *argv)
break;
case 'r': {
- const char *end = H5_optarg;
+ const char *end = opt_arg;
int j = 0;
while (end && *end != '\0') {
diff --git a/tools/src/h5repack/h5repack_main.c b/tools/src/h5repack/h5repack_main.c
index 04a87b9..8ab9637 100644
--- a/tools/src/h5repack/h5repack_main.c
+++ b/tools/src/h5repack/h5repack_main.c
@@ -31,38 +31,38 @@ const char *outfile = NULL;
* Command-line options: The user can specify short or long-named
* parameters.
*/
-static const char * s_opts = "a:b:c:d:e:f:hi:j:k:l:m:no:q:s:t:u:vz:EG:LM:P:S:T:VXW";
-static struct h5_long_options l_opts[] = {{"alignment", require_arg, 'a'},
- {"block", require_arg, 'b'},
- {"compact", require_arg, 'c'},
- {"indexed", require_arg, 'd'},
- {"file", require_arg, 'e'},
- {"filter", require_arg, 'f'},
- {"help", no_arg, 'h'},
- {"infile", require_arg, 'i'}, /* for backward compability */
- {"low", require_arg, 'j'},
- {"high", require_arg, 'k'},
- {"layout", require_arg, 'l'},
- {"minimum", require_arg, 'm'},
- {"native", no_arg, 'n'},
- {"outfile", require_arg, 'o'}, /* for backward compability */
- {"sort_by", require_arg, 'q'},
- {"ssize", require_arg, 's'},
- {"threshold", require_arg, 't'},
- {"ublock", require_arg, 'u'},
- {"verbose", no_arg, 'v'},
- {"sort_order", require_arg, 'z'},
- {"enable-error-stack", no_arg, 'E'},
- {"fs_pagesize", require_arg, 'G'},
- {"latest", no_arg, 'L'},
- {"metadata_block_size", require_arg, 'M'},
- {"fs_persist", require_arg, 'P'},
- {"fs_strategy", require_arg, 'S'},
- {"fs_threshold", require_arg, 'T'},
- {"version", no_arg, 'V'},
- {"merge", no_arg, 'X'},
- {"prune", no_arg, 'W'},
- {NULL, 0, '\0'}};
+static const char * s_opts = "a:b:c:d:e:f:hi:j:k:l:m:no:q:s:t:u:vz:EG:LM:P:S:T:VXW";
+static struct long_options l_opts[] = {{"alignment", require_arg, 'a'},
+ {"block", require_arg, 'b'},
+ {"compact", require_arg, 'c'},
+ {"indexed", require_arg, 'd'},
+ {"file", require_arg, 'e'},
+ {"filter", require_arg, 'f'},
+ {"help", no_arg, 'h'},
+ {"infile", require_arg, 'i'}, /* for backward compability */
+ {"low", require_arg, 'j'},
+ {"high", require_arg, 'k'},
+ {"layout", require_arg, 'l'},
+ {"minimum", require_arg, 'm'},
+ {"native", no_arg, 'n'},
+ {"outfile", require_arg, 'o'}, /* for backward compability */
+ {"sort_by", require_arg, 'q'},
+ {"ssize", require_arg, 's'},
+ {"threshold", require_arg, 't'},
+ {"ublock", require_arg, 'u'},
+ {"verbose", no_arg, 'v'},
+ {"sort_order", require_arg, 'z'},
+ {"enable-error-stack", no_arg, 'E'},
+ {"fs_pagesize", require_arg, 'G'},
+ {"latest", no_arg, 'L'},
+ {"metadata_block_size", require_arg, 'M'},
+ {"fs_persist", require_arg, 'P'},
+ {"fs_strategy", require_arg, 'S'},
+ {"fs_threshold", require_arg, 'T'},
+ {"version", no_arg, 'V'},
+ {"merge", no_arg, 'X'},
+ {"prune", no_arg, 'W'},
+ {NULL, 0, '\0'}};
/*-------------------------------------------------------------------------
* Function: usage
@@ -462,18 +462,18 @@ parse_command_line(int argc, const char *const *argv, pack_opt_t *options)
int ret_value = 0;
/* parse command line options */
- while (EOF != (opt = H5_get_option(argc, argv, s_opts, l_opts))) {
+ while (EOF != (opt = get_option(argc, argv, s_opts, l_opts))) {
switch ((char)opt) {
/* -i for backward compatibility */
case 'i':
- infile = H5_optarg;
+ infile = opt_arg;
has_i++;
break;
/* -o for backward compatibility */
case 'o':
- outfile = H5_optarg;
+ outfile = opt_arg;
has_o++;
break;
@@ -495,7 +495,7 @@ parse_command_line(int argc, const char *const *argv, pack_opt_t *options)
case 'f':
/* parse the -f filter option */
- if (h5repack_addfilter(H5_optarg, options) < 0) {
+ if (h5repack_addfilter(opt_arg, options) < 0) {
error_msg("in parsing filter\n");
h5tools_setstatus(EXIT_FAILURE);
ret_value = -1;
@@ -505,7 +505,7 @@ parse_command_line(int argc, const char *const *argv, pack_opt_t *options)
case 'l':
/* parse the -l layout option */
- if (h5repack_addlayout(H5_optarg, options) < 0) {
+ if (h5repack_addlayout(opt_arg, options) < 0) {
error_msg("in parsing layout\n");
h5tools_setstatus(EXIT_FAILURE);
ret_value = -1;
@@ -514,9 +514,9 @@ parse_command_line(int argc, const char *const *argv, pack_opt_t *options)
break;
case 'm':
- options->min_comp = HDstrtoull(H5_optarg, NULL, 0);
+ options->min_comp = HDstrtoull(opt_arg, NULL, 0);
if ((int)options->min_comp <= 0) {
- error_msg("invalid minimum compress size <%s>\n", H5_optarg);
+ error_msg("invalid minimum compress size <%s>\n", opt_arg);
h5tools_setstatus(EXIT_FAILURE);
ret_value = -1;
goto done;
@@ -524,8 +524,8 @@ parse_command_line(int argc, const char *const *argv, pack_opt_t *options)
break;
case 'e':
- if ((ret_value = read_info(H5_optarg, options)) < 0) {
- error_msg("failed to read from repack options file <%s>\n", H5_optarg);
+ if ((ret_value = read_info(opt_arg, options)) < 0) {
+ error_msg("failed to read from repack options file <%s>\n", opt_arg);
h5tools_setstatus(EXIT_FAILURE);
ret_value = -1;
goto done;
@@ -541,7 +541,7 @@ parse_command_line(int argc, const char *const *argv, pack_opt_t *options)
break;
case 'j':
- bound = HDatoi(H5_optarg);
+ bound = HDatoi(opt_arg);
if (bound < H5F_LIBVER_EARLIEST || bound > H5F_LIBVER_LATEST) {
error_msg("in parsing low bound\n");
h5tools_setstatus(EXIT_FAILURE);
@@ -552,7 +552,7 @@ parse_command_line(int argc, const char *const *argv, pack_opt_t *options)
break;
case 'k':
- bound = HDatoi(H5_optarg);
+ bound = HDatoi(opt_arg);
if (bound < H5F_LIBVER_EARLIEST || bound > H5F_LIBVER_LATEST) {
error_msg("in parsing high bound\n");
h5tools_setstatus(EXIT_FAILURE);
@@ -571,13 +571,13 @@ parse_command_line(int argc, const char *const *argv, pack_opt_t *options)
break;
case 'c':
- options->grp_compact = HDatoi(H5_optarg);
+ options->grp_compact = HDatoi(opt_arg);
if (options->grp_compact > 0)
options->latest = TRUE; /* must use latest format */
break;
case 'd':
- options->grp_indexed = HDatoi(H5_optarg);
+ options->grp_indexed = HDatoi(opt_arg);
if (options->grp_indexed > 0)
options->latest = TRUE; /* must use latest format */
break;
@@ -585,10 +585,10 @@ parse_command_line(int argc, const char *const *argv, pack_opt_t *options)
case 's': {
int idx = 0;
int ssize = 0;
- char *msgPtr = HDstrchr(H5_optarg, ':');
+ char *msgPtr = HDstrchr(opt_arg, ':');
options->latest = TRUE; /* must use latest format */
if (msgPtr == NULL) {
- ssize = HDatoi(H5_optarg);
+ ssize = HDatoi(opt_arg);
for (idx = 0; idx < 5; idx++)
options->msg_size[idx] = ssize;
}
@@ -597,7 +597,7 @@ parse_command_line(int argc, const char *const *argv, pack_opt_t *options)
HDstrcpy(msgType, msgPtr + 1);
msgPtr[0] = '\0';
- ssize = HDatoi(H5_optarg);
+ ssize = HDatoi(opt_arg);
if (!HDstrncmp(msgType, "dspace", 6))
options->msg_size[0] = ssize;
else if (!HDstrncmp(msgType, "dtype", 5))
@@ -612,25 +612,25 @@ parse_command_line(int argc, const char *const *argv, pack_opt_t *options)
} break;
case 'u':
- options->ublock_filename = H5_optarg;
+ options->ublock_filename = opt_arg;
break;
case 'b':
- options->ublock_size = (hsize_t)HDatol(H5_optarg);
+ options->ublock_size = (hsize_t)HDatol(opt_arg);
break;
case 'M':
- options->meta_block_size = (hsize_t)HDatol(H5_optarg);
+ options->meta_block_size = (hsize_t)HDatol(opt_arg);
break;
case 't':
- options->threshold = (hsize_t)HDatol(H5_optarg);
+ options->threshold = (hsize_t)HDatol(opt_arg);
break;
case 'a':
- options->alignment = HDstrtoull(H5_optarg, NULL, 0);
+ options->alignment = HDstrtoull(opt_arg, NULL, 0);
if (options->alignment < 1) {
- error_msg("invalid alignment size\n", H5_optarg);
+ error_msg("invalid alignment size\n", opt_arg);
h5tools_setstatus(EXIT_FAILURE);
ret_value = -1;
goto done;
@@ -640,7 +640,7 @@ parse_command_line(int argc, const char *const *argv, pack_opt_t *options)
case 'S': {
char strategy[MAX_NC_NAME];
- HDstrcpy(strategy, H5_optarg);
+ HDstrcpy(strategy, opt_arg);
if (!HDstrcmp(strategy, "FSM_AGGR"))
options->fs_strategy = H5F_FSPACE_STRATEGY_FSM_AGGR;
else if (!HDstrcmp(strategy, "PAGE"))
@@ -650,7 +650,7 @@ parse_command_line(int argc, const char *const *argv, pack_opt_t *options)
else if (!HDstrcmp(strategy, "NONE"))
options->fs_strategy = H5F_FSPACE_STRATEGY_NONE;
else {
- error_msg("invalid file space management strategy\n", H5_optarg);
+ error_msg("invalid file space management strategy\n", opt_arg);
h5tools_setstatus(EXIT_FAILURE);
ret_value = -1;
goto done;
@@ -661,29 +661,29 @@ parse_command_line(int argc, const char *const *argv, pack_opt_t *options)
} break;
case 'P':
- options->fs_persist = HDatoi(H5_optarg);
+ options->fs_persist = HDatoi(opt_arg);
if (options->fs_persist == 0)
/* To distinguish the "specified" zero value */
options->fs_persist = -1;
break;
case 'T':
- options->fs_threshold = HDatol(H5_optarg);
+ options->fs_threshold = HDatol(opt_arg);
if (options->fs_threshold == 0)
/* To distinguish the "specified" zero value */
options->fs_threshold = -1;
break;
case 'G':
- options->fs_pagesize = HDstrtoll(H5_optarg, NULL, 0);
+ options->fs_pagesize = HDstrtoll(opt_arg, NULL, 0);
if (options->fs_pagesize == 0)
/* To distinguish the "specified" zero value */
options->fs_pagesize = -1;
break;
case 'q':
- if (H5_INDEX_UNKNOWN == (sort_by = set_sort_by(H5_optarg))) {
- error_msg("failed to set sort by form <%s>\n", H5_optarg);
+ if (H5_INDEX_UNKNOWN == (sort_by = set_sort_by(opt_arg))) {
+ error_msg("failed to set sort by form <%s>\n", opt_arg);
h5tools_setstatus(EXIT_FAILURE);
ret_value = -1;
goto done;
@@ -691,8 +691,8 @@ parse_command_line(int argc, const char *const *argv, pack_opt_t *options)
break;
case 'z':
- if (H5_ITER_UNKNOWN == (sort_order = set_sort_order(H5_optarg))) {
- error_msg("failed to set sort order form <%s>\n", H5_optarg);
+ if (H5_ITER_UNKNOWN == (sort_order = set_sort_order(opt_arg))) {
+ error_msg("failed to set sort order form <%s>\n", opt_arg);
h5tools_setstatus(EXIT_FAILURE);
ret_value = -1;
goto done;
@@ -710,9 +710,9 @@ parse_command_line(int argc, const char *const *argv, pack_opt_t *options)
/* If neither -i nor -o given, get in and out files positionally */
if (0 == (has_i + has_o)) {
- if (argv[H5_optind] != NULL && argv[H5_optind + 1] != NULL) {
- infile = argv[H5_optind];
- outfile = argv[H5_optind + 1];
+ if (argv[opt_ind] != NULL && argv[opt_ind + 1] != NULL) {
+ infile = argv[opt_ind];
+ outfile = argv[opt_ind + 1];
if (!HDstrcmp(infile, outfile)) {
error_msg("file names cannot be the same\n");
diff --git a/tools/src/h5stat/h5stat.c b/tools/src/h5stat/h5stat.c
index bb0f0a0..d36c348 100644
--- a/tools/src/h5stat/h5stat.c
+++ b/tools/src/h5stat/h5stat.c
@@ -171,23 +171,23 @@ struct handler_t {
static const char *s_opts = "Aa:Ddm:EFfhGgl:sSTO:Vw:H:";
/* e.g. "filemetadata" has to precede "file"; "groupmetadata" has to precede "group" etc. */
-static struct h5_long_options l_opts[] = {{"help", no_arg, 'h'},
- {"filemetadata", no_arg, 'F'},
- {"groupmetadata", no_arg, 'G'},
- {"links", require_arg, 'l'},
- {"dsetmetadata", no_arg, 'D'},
- {"dims", require_arg, 'm'},
- {"dtypemetadata", no_arg, 'T'},
- {"object", require_arg, 'O'},
- {"version", no_arg, 'V'},
- {"attribute", no_arg, 'A'},
- {"enable-error-stack", no_arg, 'E'},
- {"numattrs", require_arg, 'a'},
- {"freespace", no_arg, 's'},
- {"summary", no_arg, 'S'},
- {"s3-cred", require_arg, 'w'},
- {"hdfs-attrs", require_arg, 'H'},
- {NULL, 0, '\0'}};
+static struct long_options l_opts[] = {{"help", no_arg, 'h'},
+ {"filemetadata", no_arg, 'F'},
+ {"groupmetadata", no_arg, 'G'},
+ {"links", require_arg, 'l'},
+ {"dsetmetadata", no_arg, 'D'},
+ {"dims", require_arg, 'm'},
+ {"dtypemetadata", no_arg, 'T'},
+ {"object", require_arg, 'O'},
+ {"version", no_arg, 'V'},
+ {"attribute", no_arg, 'A'},
+ {"enable-error-stack", no_arg, 'E'},
+ {"numattrs", require_arg, 'a'},
+ {"freespace", no_arg, 's'},
+ {"summary", no_arg, 'S'},
+ {"s3-cred", require_arg, 'w'},
+ {"hdfs-attrs", require_arg, 'H'},
+ {NULL, 0, '\0'}};
static void
leave(int ret)
@@ -831,7 +831,7 @@ parse_command_line(int argc, const char *const *argv, struct handler_t **hand_re
struct handler_t *hand = NULL;
/* parse command line options */
- while ((opt = H5_get_option(argc, argv, s_opts, l_opts)) != EOF) {
+ while ((opt = get_option(argc, argv, s_opts, l_opts)) != EOF) {
switch ((char)opt) {
case 'h':
usage(h5tools_getprogname());
@@ -870,8 +870,8 @@ parse_command_line(int argc, const char *const *argv, struct handler_t **hand_re
break;
case 'l':
- if (H5_optarg) {
- sgroups_threshold = HDatoi(H5_optarg);
+ if (opt_arg) {
+ sgroups_threshold = HDatoi(opt_arg);
if (sgroups_threshold < 1) {
error_msg("Invalid threshold for small groups\n");
goto error;
@@ -893,8 +893,8 @@ parse_command_line(int argc, const char *const *argv, struct handler_t **hand_re
break;
case 'm':
- if (H5_optarg) {
- sdsets_threshold = HDatoi(H5_optarg);
+ if (opt_arg) {
+ sdsets_threshold = HDatoi(opt_arg);
if (sdsets_threshold < 1) {
error_msg("Invalid threshold for small datasets\n");
goto error;
@@ -916,8 +916,8 @@ parse_command_line(int argc, const char *const *argv, struct handler_t **hand_re
break;
case 'a':
- if (H5_optarg) {
- sattrs_threshold = HDatoi(H5_optarg);
+ if (opt_arg) {
+ sattrs_threshold = HDatoi(opt_arg);
if (sattrs_threshold < 1) {
error_msg("Invalid threshold for small # of attributes\n");
goto error;
@@ -957,7 +957,7 @@ parse_command_line(int argc, const char *const *argv, struct handler_t **hand_re
/* Store object names */
for (u = 0; u < hand->obj_count; u++)
- if (NULL == (hand->obj[u] = HDstrdup(H5_optarg))) {
+ if (NULL == (hand->obj[u] = HDstrdup(opt_arg))) {
error_msg("unable to allocate memory for object name\n");
goto error;
} /* end if */
@@ -965,7 +965,7 @@ parse_command_line(int argc, const char *const *argv, struct handler_t **hand_re
case 'w':
#ifdef H5_HAVE_ROS3_VFD
- if (h5tools_parse_ros3_fapl_tuple(H5_optarg, ',', &ros3_fa) < 0) {
+ if (h5tools_parse_ros3_fapl_tuple(opt_arg, ',', &ros3_fa) < 0) {
error_msg("failed to parse S3 VFD credential info\n");
goto error;
}
@@ -979,7 +979,7 @@ parse_command_line(int argc, const char *const *argv, struct handler_t **hand_re
case 'H':
#ifdef H5_HAVE_LIBHDFS
- if (h5tools_parse_hdfs_fapl_tuple(H5_optarg, ',', &hdfs_fa) < 0) {
+ if (h5tools_parse_hdfs_fapl_tuple(opt_arg, ',', &hdfs_fa) < 0) {
error_msg("failed to parse HDFS VFD configuration info\n");
goto error;
}
@@ -998,7 +998,7 @@ parse_command_line(int argc, const char *const *argv, struct handler_t **hand_re
} /* end while */
/* check for file name to be processed */
- if (argc <= H5_optind) {
+ if (argc <= opt_ind) {
error_msg("missing file name\n");
usage(h5tools_getprogname());
goto error;
@@ -1722,7 +1722,7 @@ main(int argc, char *argv[])
}
}
- fname = argv[H5_optind];
+ fname = argv[opt_ind];
/* Check for filename given */
if (fname) {
diff --git a/tools/src/misc/h5clear.c b/tools/src/misc/h5clear.c
index 15c170d..60e2e63 100644
--- a/tools/src/misc/h5clear.c
+++ b/tools/src/misc/h5clear.c
@@ -44,8 +44,8 @@ static hsize_t increment = DEFAULT_INCREMENT;
/*
* Command-line options: only publicize long options
*/
-static const char * s_opts = "hVsmzi*";
-static struct h5_long_options l_opts[] = {
+static const char * s_opts = "hVsmzi*";
+static struct long_options l_opts[] = {
{"help", no_arg, 'h'}, {"version", no_arg, 'V'}, {"status", no_arg, 's'},
{"image", no_arg, 'm'}, {"filesize", no_arg, 'z'}, {"increment", optional_arg, 'i'},
{NULL, 0, '\0'}};
@@ -121,7 +121,7 @@ parse_command_line(int argc, const char *const *argv)
}
/* parse command line options */
- while ((opt = H5_get_option(argc, argv, s_opts, l_opts)) != EOF) {
+ while ((opt = get_option(argc, argv, s_opts, l_opts)) != EOF) {
switch ((char)opt) {
case 'h':
usage(h5tools_getprogname());
@@ -147,12 +147,12 @@ parse_command_line(int argc, const char *const *argv)
case 'i':
increment_eoa_eof = TRUE;
- if (H5_optarg != NULL) {
- if (HDatoi(H5_optarg) < 0) {
+ if (opt_arg != NULL) {
+ if (HDatoi(opt_arg) < 0) {
usage(h5tools_getprogname());
goto done;
}
- increment = (hsize_t)HDatoi(H5_optarg);
+ increment = (hsize_t)HDatoi(opt_arg);
}
break;
@@ -164,14 +164,14 @@ parse_command_line(int argc, const char *const *argv)
} /* end while */
/* check for file name to be processed */
- if (argc <= H5_optind) {
+ if (argc <= opt_ind) {
error_msg("missing file name\n");
usage(h5tools_getprogname());
h5tools_setstatus(EXIT_FAILURE);
goto error;
} /* end if */
- fname_g = HDstrdup(argv[H5_optind]);
+ fname_g = HDstrdup(argv[opt_ind]);
done:
return (0);
diff --git a/tools/src/misc/h5mkgrp.c b/tools/src/misc/h5mkgrp.c
index 1942216..9b0d8f0 100644
--- a/tools/src/misc/h5mkgrp.c
+++ b/tools/src/misc/h5mkgrp.c
@@ -22,10 +22,10 @@
int d_status = EXIT_SUCCESS;
/* command-line options: short and long-named parameters */
-static const char * s_opts = "hlpvV";
-static struct h5_long_options l_opts[] = {{"help", no_arg, 'h'}, {"latest", no_arg, 'l'},
- {"parents", no_arg, 'p'}, {"verbose", no_arg, 'v'},
- {"version", no_arg, 'V'}, {NULL, 0, '\0'}};
+static const char * s_opts = "hlpvV";
+static struct long_options l_opts[] = {{"help", no_arg, 'h'}, {"latest", no_arg, 'l'},
+ {"parents", no_arg, 'p'}, {"verbose", no_arg, 'v'},
+ {"version", no_arg, 'V'}, {NULL, 0, '\0'}};
/* Command line parameter settings */
typedef struct mkgrp_opt_t {
@@ -124,7 +124,7 @@ parse_command_line(int argc, const char *const *argv, mkgrp_opt_t *options)
}
/* Parse command line options */
- while ((opt = H5_get_option(argc, argv, s_opts, l_opts)) != EOF) {
+ while ((opt = get_option(argc, argv, s_opts, l_opts)) != EOF) {
switch ((char)opt) {
/* Display 'help' */
case 'h':
@@ -161,33 +161,33 @@ parse_command_line(int argc, const char *const *argv, mkgrp_opt_t *options)
} /* end while */
/* Check for file name to be processed */
- if (argc <= H5_optind) {
+ if (argc <= opt_ind) {
error_msg("missing file name\n");
usage(h5tools_getprogname());
leave(EXIT_FAILURE);
}
/* Retrieve file name */
- options->fname = HDstrdup(argv[H5_optind]);
- H5_optind++;
+ options->fname = HDstrdup(argv[opt_ind]);
+ opt_ind++;
/* Check for group(s) to be created */
- if (argc <= H5_optind) {
+ if (argc <= opt_ind) {
error_msg("missing group name(s)\n");
usage(h5tools_getprogname());
leave(EXIT_FAILURE);
}
/* Allocate space for the group name pointers */
- options->ngroups = (size_t)(argc - H5_optind);
+ options->ngroups = (size_t)(argc - opt_ind);
options->groups = (char **)HDmalloc(options->ngroups * sizeof(char *));
/* Retrieve the group names */
curr_group = 0;
- while (H5_optind < argc) {
- options->groups[curr_group] = HDstrdup(argv[H5_optind]);
+ while (opt_ind < argc) {
+ options->groups[curr_group] = HDstrdup(argv[opt_ind]);
curr_group++;
- H5_optind++;
+ opt_ind++;
}
return 0;