Merge branch 'develop' into stack_size_warnings

17 files changed, 352 insertions, 283 deletions

diff --git a/tools/src/h5copy/h5copy.c b/tools/src/h5copy/h5copy.c
index 86bd6f6..e1370e2 100644
--- a/tools/src/h5copy/h5copy.c
+++ b/tools/src/h5copy/h5copy.c
@@ -211,8 +211,8 @@ main (int argc, const char *argv[])
     H5E_auto2_t         tools_func;
     void               *edata;
     void               *tools_edata;
-    hid_t        fid_src = -1;
-    hid_t        fid_dst = -1;
+    hid_t        fid_src = H5I_INVALID_HID;
+    hid_t        fid_dst = H5I_INVALID_HID;
     unsigned     flag = 0;
     unsigned     verbose = 0;
     unsigned     parents = 0;
diff --git a/tools/src/h5diff/ph5diff_main.c b/tools/src/h5diff/ph5diff_main.c
index 380ab3b..5ba5fb3 100644
--- a/tools/src/h5diff/ph5diff_main.c
+++ b/tools/src/h5diff/ph5diff_main.c
@@ -126,7 +126,8 @@ int main(int argc, const char *argv[])
 static void
 ph5diff_worker(int nID)
 {
-    hid_t file1_id = -1, file2_id = -1;
+    hid_t file1_id = H5I_INVALID_HID;
+    hid_t file2_id = H5I_INVALID_HID;
 
     while(1)
     {
diff --git a/tools/src/h5dump/h5dump.c b/tools/src/h5dump/h5dump.c
index 0222c8b..d97fdc0 100644
--- a/tools/src/h5dump/h5dump.c
+++ b/tools/src/h5dump/h5dump.c
@@ -1393,12 +1393,12 @@ error:
 int
 main(int argc, const char *argv[])
 {
-    hid_t               fid = -1;
-    hid_t               gid = -1;
+    hid_t               fid = H5I_INVALID_HID;
+    hid_t               gid = H5I_INVALID_HID;
     hid_t               fapl_id = H5P_DEFAULT;
     H5E_auto2_t         func;
     H5E_auto2_t         tools_func;
-    H5O_info_t          oi;
+    H5O_info2_t         oi;
     struct handler_t   *hand = NULL;
     int                 i;
     unsigned            u;
@@ -1567,7 +1567,7 @@ main(int argc, const char *argv[])
         }
 
         /* Get object info for root group */
-        if(H5Oget_info_by_name2(fid, "/", &oi, H5O_INFO_BASIC, H5P_DEFAULT) < 0) {
+        if(H5Oget_info_by_name3(fid, "/", &oi, H5O_INFO_BASIC, H5P_DEFAULT) < 0) {
             error_msg("internal error (file %s:line %d)\n", __FILE__, __LINE__);
             h5tools_setstatus(EXIT_FAILURE);
             goto done;
diff --git a/tools/src/h5dump/h5dump_ddl.c b/tools/src/h5dump/h5dump_ddl.c
index bc426f2..a410fda 100644
--- a/tools/src/h5dump/h5dump_ddl.c
+++ b/tools/src/h5dump/h5dump_ddl.c
@@ -31,7 +31,7 @@ typedef struct {
 } trav_attr_udata_t;
 
 /* callback function used by H5Literate() */
-static herr_t   dump_all_cb(hid_t group, const char *name, const H5L_info_t *linfo, void *op_data);
+static herr_t   dump_all_cb(hid_t group, const char *name, const H5L_info2_t *linfo, void *op_data);
 static int      dump_extlink(hid_t group, const char *linkname, const char *objname);
 
 /*-------------------------------------------------------------------------
@@ -152,7 +152,7 @@ dump_attr_cb(hid_t oid, const char *attr_name, const H5A_info_t H5_ATTR_UNUSED *
  *-------------------------------------------------------------------------
  */
 static herr_t
-dump_all_cb(hid_t group, const char *name, const H5L_info_t *linfo, void H5_ATTR_UNUSED *op_data)
+dump_all_cb(hid_t group, const char *name, const H5L_info2_t *linfo, void H5_ATTR_UNUSED *op_data)
 {
     hid_t       obj;
     hid_t       dapl_id = H5P_DEFAULT;  /* dataset access property list ID */
@@ -200,10 +200,10 @@ dump_all_cb(hid_t group, const char *name, const H5L_info_t *linfo, void H5_ATTR
     HDstrcat(obj_path, name);
 
     if(linfo->type == H5L_TYPE_HARD) {
-        H5O_info_t  oinfo;
+        H5O_info2_t  oinfo;
 
         /* Stat the object */
-        if(H5Oget_info_by_name2(group, name, &oinfo, H5O_INFO_BASIC, H5P_DEFAULT) < 0) {
+        if(H5Oget_info_by_name3(group, name, &oinfo, H5O_INFO_BASIC, H5P_DEFAULT) < 0) {
             error_msg("unable to get object information for \"%s\"\n", name);
             h5tools_setstatus(EXIT_FAILURE);
             ret = FAIL;
@@ -259,7 +259,7 @@ dump_all_cb(hid_t group, const char *name, const H5L_info_t *linfo, void H5_ATTR
                 if(oinfo.rc > 1 || hit_elink) {
                     obj_t  *found_obj;    /* Found object */
 
-                    found_obj = search_obj(dset_table, oinfo.addr);
+                    found_obj = search_obj(dset_table, &oinfo.token);
 
                     if(found_obj == NULL) {
                         ctx.indent_level++;
@@ -596,9 +596,9 @@ link_iteration(hid_t gid, unsigned crt_order_flags)
     /* if there is a request to do H5_INDEX_CRT_ORDER and tracking order is set
        in the group, then, sort by creation order, otherwise by name */
     if((sort_by == H5_INDEX_CRT_ORDER) && (crt_order_flags & H5P_CRT_ORDER_TRACKED))
-        H5Literate(gid, sort_by, sort_order, NULL, dump_all_cb, NULL);
+        H5Literate2(gid, sort_by, sort_order, NULL, dump_all_cb, NULL);
     else
-        H5Literate(gid, H5_INDEX_NAME, sort_order, NULL, dump_all_cb, NULL);
+        H5Literate2(gid, H5_INDEX_NAME, sort_order, NULL, dump_all_cb, NULL);
 }
 
 /*-------------------------------------------------------------------------
@@ -612,9 +612,9 @@ link_iteration(hid_t gid, unsigned crt_order_flags)
 void
 dump_named_datatype(hid_t tid, const char *name)
 {
-    H5O_info_t        oinfo;
+    H5O_info2_t       oinfo;
     unsigned          attr_crt_order_flags;
-    hid_t             tcpl_id = -1;    /* datatype creation property list ID */
+    hid_t             tcpl_id = H5I_INVALID_HID;    /* datatype creation property list ID */
     hsize_t           curr_pos = 0;    /* total data element position   */
     h5tools_str_t     buffer;          /* string into which to render   */
     h5tools_context_t ctx;             /* print context  */
@@ -670,7 +670,7 @@ dump_named_datatype(hid_t tid, const char *name)
                         h5tools_dump_header_format->datatypeblockbegin);
     h5tools_render_element(rawoutstream, outputformat, &ctx, &buffer, &curr_pos, (size_t)outputformat->line_ncols, (hsize_t)0, (hsize_t)0);
 
-    H5Oget_info2(tid, &oinfo, H5O_INFO_BASIC);
+    H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC);
 
     /* Must check for uniqueness of all objects if we've traversed an elink,
      * otherwise only check if the reference count > 1.
@@ -678,7 +678,7 @@ dump_named_datatype(hid_t tid, const char *name)
     if(oinfo.rc > 1 || hit_elink) {
         obj_t  *found_obj;    /* Found object */
 
-        found_obj = search_obj(type_table, oinfo.addr);
+        found_obj = search_obj(type_table, &oinfo.token);
 
         if (found_obj == NULL) {
             error_msg("internal error (file %s:line %d)\n", __FILE__, __LINE__);
@@ -739,7 +739,7 @@ done:
 void
 dump_group(hid_t gid, const char *name)
 {
-    H5O_info_t  oinfo;
+    H5O_info2_t oinfo;
     hid_t       dset;
     hid_t       type;
     hid_t       gcpl_id;
@@ -816,9 +816,15 @@ dump_group(hid_t gid, const char *name)
         /* dump unamed type in root group */
         for(u = 0; u < type_table->nobjs; u++)
             if(!type_table->objs[u].recorded) {
+                char *obj_addr_str = NULL;
+
                 dset = H5Dopen2(gid, type_table->objs[u].objname, H5P_DEFAULT);
                 type = H5Dget_type(dset);
-                HDsprintf(type_name, "#"H5_PRINTF_HADDR_FMT, type_table->objs[u].objno);
+
+                H5Otoken_to_str(dset, &type_table->objs[u].obj_token, &obj_addr_str);
+                HDsprintf(type_name, "#%s", obj_addr_str);
+                H5free_memory(obj_addr_str);
+
                 dump_function_table->dump_named_datatype_function(type, type_name);
                 H5Tclose(type);
                 H5Dclose(dset);
@@ -830,7 +836,7 @@ dump_group(hid_t gid, const char *name)
 
     h5tools_dump_comment(rawoutstream, outputformat, &ctx, gid);
 
-    H5Oget_info2(gid, &oinfo, H5O_INFO_BASIC);
+    H5Oget_info3(gid, &oinfo, H5O_INFO_BASIC);
 
     /* Must check for uniqueness of all objects if we've traversed an elink,
      * otherwise only check if the reference count > 1.
@@ -838,7 +844,7 @@ dump_group(hid_t gid, const char *name)
     if(oinfo.rc > 1 || hit_elink) {
         obj_t  *found_obj;    /* Found object */
 
-        found_obj = search_obj(group_table, oinfo.addr);
+        found_obj = search_obj(group_table, &oinfo.token);
 
         if (found_obj == NULL) {
             error_msg("internal error (file %s:line %d)\n", __FILE__, __LINE__);
@@ -1251,8 +1257,13 @@ dump_fcontents(hid_t fid)
         unsigned u;
 
         for (u = 0; u < type_table->nobjs; u++) {
-            if (!type_table->objs[u].recorded)
-                PRINTSTREAM(rawoutstream, " %-10s /#"H5_PRINTF_HADDR_FMT"\n", "datatype", type_table->objs[u].objno);
+            if (!type_table->objs[u].recorded) {
+                char *obj_addr_str = NULL;
+
+                H5Otoken_to_str(fid, &type_table->objs[u].obj_token, &obj_addr_str);
+                PRINTSTREAM(rawoutstream, " %-10s /#%s\n", "datatype", obj_addr_str);
+                H5free_memory(obj_addr_str);
+            }
         }
     }
 
@@ -1319,7 +1330,7 @@ attr_search(hid_t oid, const char *attr_name, const H5A_info_t H5_ATTR_UNUSED *a
 } /* end attr_search() */
 
 static herr_t
-obj_search(const char *path, const H5O_info_t *oi, const char H5_ATTR_UNUSED *already_visited, void *_op_data)
+obj_search(const char *path, const H5O_info2_t *oi, const char H5_ATTR_UNUSED *already_visited, void *_op_data)
 {
     trav_handle_udata_t  *handle_data = (trav_handle_udata_t*)_op_data;
     const char *op_name = handle_data->op_name;
@@ -1356,7 +1367,7 @@ obj_search(const char *path, const H5O_info_t *oi, const char H5_ATTR_UNUSED *al
 } /* end obj_search() */
 
 static herr_t
-lnk_search(const char *path, const H5L_info_t *li, void *_op_data)
+lnk_search(const char *path, const H5L_info2_t *li, void *_op_data)
 {
     size_t      search_len;
     size_t      k;
@@ -1415,7 +1426,7 @@ lnk_search(const char *path, const H5L_info_t *li, void *_op_data)
 void
 handle_paths(hid_t fid, const char *path_name, void H5_ATTR_UNUSED * data, int H5_ATTR_UNUSED pe, const char H5_ATTR_UNUSED *display_name)
 {
-    hid_t  gid = -1;
+    hid_t  gid = H5I_INVALID_HID;
 
     if((gid = H5Gopen2(fid, "/", H5P_DEFAULT)) < 0) {
         error_msg("unable to open root group\n");
@@ -1469,8 +1480,8 @@ handle_paths(hid_t fid, const char *path_name, void H5_ATTR_UNUSED * data, int H
 void
 handle_attributes(hid_t fid, const char *attr, void H5_ATTR_UNUSED *data, int H5_ATTR_UNUSED pe, const char H5_ATTR_UNUSED *display_name)
 {
-    hid_t  oid          = -1;
-    hid_t  attr_id      = -1;
+    hid_t  oid          = H5I_INVALID_HID;
+    hid_t  attr_id      = H5I_INVALID_HID;
     char *obj_name      = NULL;
     char *attr_name     = NULL;
     int j;
@@ -1608,7 +1619,7 @@ error:
 void
 handle_datasets(hid_t fid, const char *dset, void *data, int pe, const char *display_name)
 {
-    H5O_info_t       oinfo;
+    H5O_info2_t      oinfo;
     hid_t            dsetid;
     hid_t            dapl_id = H5P_DEFAULT;  /* dataset access property list ID */
     struct subset_t *sset = (struct subset_t *)data;
@@ -1719,11 +1730,11 @@ handle_datasets(hid_t fid, const char *dset, void *data, int pe, const char *dis
     } /* end if */
 
 
-    H5Oget_info2(dsetid, &oinfo, H5O_INFO_BASIC);
+    H5Oget_info3(dsetid, &oinfo, H5O_INFO_BASIC);
     if(oinfo.rc > 1 || hit_elink) {
         obj_t  *found_obj;    /* Found object */
 
-        found_obj = search_obj(dset_table, oinfo.addr);
+        found_obj = search_obj(dset_table, &oinfo.token);
 
         if(found_obj) {
             if (found_obj->displayed) {
@@ -1812,9 +1823,9 @@ handle_groups(hid_t fid, const char *group, void H5_ATTR_UNUSED *data, int pe, c
 void
 handle_links(hid_t fid, const char *links, void H5_ATTR_UNUSED * data, int H5_ATTR_UNUSED pe, const char H5_ATTR_UNUSED *display_name)
 {
-    H5L_info_t linfo;
+    H5L_info2_t linfo;
 
-    if(H5Lget_info(fid, links, &linfo, H5P_DEFAULT) < 0) {
+    if(H5Lget_info2(fid, links, &linfo, H5P_DEFAULT) < 0) {
         error_msg("unable to get link info from \"%s\"\n", links);
         h5tools_setstatus(EXIT_FAILURE);
     }
@@ -1903,8 +1914,12 @@ handle_datatypes(hid_t fid, const char *type, void H5_ATTR_UNUSED * data, int pe
             char name[128];
 
             if(!type_table->objs[idx].recorded) {
+                char *obj_addr_string = NULL;
+
                 /* unamed datatype */
-                HDsprintf(name, "/#"H5_PRINTF_HADDR_FMT, type_table->objs[idx].objno);
+                H5Otoken_to_str(fid, &type_table->objs[idx].obj_token, &obj_addr_string);
+                HDsprintf(name, "/#%s", obj_addr_string);
+                H5free_memory(obj_addr_string);
 
                 if(!HDstrcmp(name, real_name))
                     break;
@@ -1962,7 +1977,7 @@ static int
 dump_extlink(hid_t group, const char *linkname, const char *objname)
 {
     hid_t       oid;
-    H5O_info_t  oi;
+    H5O_info2_t oi;
     table_t     *old_group_table = group_table;
     table_t     *old_dset_table = dset_table;
     table_t     *old_type_table = type_table;
@@ -1974,7 +1989,7 @@ dump_extlink(hid_t group, const char *linkname, const char *objname)
         goto fail;
 
     /* Get object info */
-    if (H5Oget_info2(oid, &oi, H5O_INFO_BASIC) < 0) {
+    if (H5Oget_info3(oid, &oi, H5O_INFO_BASIC) < 0) {
         H5Oclose(oid);
         goto fail;
     }
diff --git a/tools/src/h5dump/h5dump_xml.c b/tools/src/h5dump/h5dump_xml.c
index b63e68d..7a3ad80 100644
--- a/tools/src/h5dump/h5dump_xml.c
+++ b/tools/src/h5dump/h5dump_xml.c
@@ -106,7 +106,7 @@ static h5tool_format_t         xml_dataformat = {
 
 
 /* internal functions */
-static int              xml_name_to_XID(const char *, char *, int , int );
+static int              xml_name_to_XID(hid_t, const char *, char *, int, int);
 
 /* internal functions used by XML option */
 static void             xml_print_datatype(hid_t, unsigned);
@@ -130,7 +130,7 @@ static char            *xml_escape_the_name(const char *);
  *-------------------------------------------------------------------------
  */
 static herr_t
-xml_dump_all_cb(hid_t group, const char *name, const H5L_info_t *linfo, void H5_ATTR_UNUSED *op_data)
+xml_dump_all_cb(hid_t group, const char *name, const H5L_info2_t *linfo, void H5_ATTR_UNUSED *op_data)
 {
     hid_t             obj;
     herr_t            ret = SUCCEED;
@@ -177,10 +177,10 @@ xml_dump_all_cb(hid_t group, const char *name, const H5L_info_t *linfo, void H5_
     HDstrcat(obj_path, name);
 
     if(linfo->type == H5L_TYPE_HARD) {
-        H5O_info_t  oinfo;
+        H5O_info2_t  oinfo;
 
         /* Stat the object */
-        if(H5Oget_info_by_name2(group, name, &oinfo, H5O_INFO_BASIC, H5P_DEFAULT) < 0) {
+        if(H5Oget_info_by_name3(group, name, &oinfo, H5O_INFO_BASIC, H5P_DEFAULT) < 0) {
             error_msg("unable to get object information for \"%s\"\n", name);
             h5tools_setstatus(EXIT_FAILURE);
             ret = FAIL;
@@ -225,7 +225,7 @@ xml_dump_all_cb(hid_t group, const char *name, const H5L_info_t *linfo, void H5_
                 if(oinfo.rc > 1 || hit_elink) {
                     obj_t  *found_obj;    /* Found object */
 
-                    found_obj = search_obj(dset_table, oinfo.addr);
+                    found_obj = search_obj(dset_table, &oinfo.token);
 
                     if(found_obj == NULL) {
                         ctx.indent_level++;
@@ -272,8 +272,8 @@ xml_dump_all_cb(hid_t group, const char *name, const H5L_info_t *linfo, void H5_
                         char pointerxid[100];
 
                         /* Create OBJ-XIDs for the parent and object */
-                        xml_name_to_XID(obj_path, dsetxid, (int)sizeof(dsetxid), 1);
-                        xml_name_to_XID(prefix, parentxid, (int)sizeof(parentxid), 1);
+                        xml_name_to_XID(obj, obj_path, dsetxid, (int)sizeof(dsetxid), 1);
+                        xml_name_to_XID(obj, prefix, parentxid, (int)sizeof(parentxid), 1);
 
                         ctx.need_prefix = TRUE;
 
@@ -290,7 +290,7 @@ xml_dump_all_cb(hid_t group, const char *name, const H5L_info_t *linfo, void H5_
                                 t_prefix);                  /* H5ParentPaths */
                         h5tools_render_element(rawoutstream, outputformat, &ctx, &buffer, &curr_pos, (size_t)outputformat->line_ncols, (hsize_t)0, (hsize_t)0);
 
-                        xml_name_to_XID(found_obj->objname, pointerxid, (int)sizeof(pointerxid), 1);
+                        xml_name_to_XID(obj, found_obj->objname, pointerxid, (int)sizeof(pointerxid), 1);
 
                         ctx.indent_level++;
 
@@ -393,11 +393,11 @@ xml_dump_all_cb(hid_t group, const char *name, const H5L_info_t *linfo, void H5_
                     } /* end else */
 
                     /* Create OBJ-XIDs for the parent and object */
-                    xml_name_to_XID(t_obj_path, linkxid, (int)sizeof(linkxid), 1);
-                    xml_name_to_XID(prefix, parentxid, (int)sizeof(parentxid), 1);
+                    xml_name_to_XID(group, t_obj_path, linkxid, (int)sizeof(linkxid), 1);
+                    xml_name_to_XID(group, prefix, parentxid, (int)sizeof(parentxid), 1);
 
                     /* Try to create an OBJ-XID for the object pointed to */
-                    res = xml_name_to_XID(t_link_path, targetxid, (int)sizeof(targetxid), 0);
+                    res = xml_name_to_XID(group, t_link_path, targetxid, (int)sizeof(targetxid), 0);
                     if (res == 0) {
                         /* target obj found */
                         ctx.need_prefix = TRUE;
@@ -482,8 +482,8 @@ xml_dump_all_cb(hid_t group, const char *name, const H5L_info_t *linfo, void H5_
                         char *t_targname = xml_escape_the_name(targname);
 
                         /* Create OBJ-XIDs for the parent and object */
-                        xml_name_to_XID(t_obj_path, linkxid, (int)sizeof(linkxid), 1);
-                        xml_name_to_XID(prefix, parentxid, (int)sizeof(parentxid), 1);
+                        xml_name_to_XID(group, t_obj_path, linkxid, (int)sizeof(linkxid), 1);
+                        xml_name_to_XID(group, prefix, parentxid, (int)sizeof(parentxid), 1);
 
                         ctx.need_prefix = TRUE;
 
@@ -528,8 +528,8 @@ xml_dump_all_cb(hid_t group, const char *name, const H5L_info_t *linfo, void H5_
                 char *t_obj_path = xml_escape_the_name(obj_path);
 
                 /* Create OBJ-XIDs for the parent and object */
-                xml_name_to_XID(t_obj_path, linkxid, (int)sizeof(linkxid), 1);
-                xml_name_to_XID(prefix, parentxid, (int)sizeof(parentxid), 1);
+                xml_name_to_XID(group, t_obj_path, linkxid, (int)sizeof(linkxid), 1);
+                xml_name_to_XID(group, prefix, parentxid, (int)sizeof(parentxid), 1);
 
                 ctx.need_prefix = TRUE;
 
@@ -575,20 +575,26 @@ done:
  *         1 - generate a fake entry and return fake id.
  */
 int
-xml_name_to_XID(const char *str , char *outstr, int outlen, int gen)
+xml_name_to_XID(hid_t loc_id, const char *str, char *outstr, int outlen, int gen)
 {
-    haddr_t objno;      /* Object ID for object at path */
+    H5O_token_t obj_token;
+    char *obj_addr_str = NULL;
+    int lookup_ret;
 
     if (outlen < 22) return 1;
 
-    objno = ref_path_table_lookup(str);
-    if (objno == HADDR_UNDEF) {
+    lookup_ret = ref_path_table_lookup(str, &obj_token);
+    if (lookup_ret < 0) {
         if (HDstrlen(str) == 0) {
-            objno = ref_path_table_lookup("/");
-            if (objno == HADDR_UNDEF) {
+            lookup_ret = ref_path_table_lookup("/", &obj_token);
+            if (lookup_ret < 0) {
                 if (gen) {
-                    objno = ref_path_table_gen_fake(str);
-                    HDsprintf(outstr, "xid_"H5_PRINTF_HADDR_FMT, objno);
+                    ref_path_table_gen_fake(str, &obj_token);
+
+                    H5Otoken_to_str(loc_id, &obj_token, &obj_addr_str);
+                    HDsprintf(outstr, "xid_%s", obj_addr_str);
+                    H5free_memory(obj_addr_str);
+
                     return 0;
                 }
                 else {
@@ -598,8 +604,12 @@ xml_name_to_XID(const char *str , char *outstr, int outlen, int gen)
         }
         else {
             if (gen) {
-                objno = ref_path_table_gen_fake(str);
-                HDsprintf(outstr, "xid_"H5_PRINTF_HADDR_FMT, objno);
+                ref_path_table_gen_fake(str, &obj_token);
+
+                H5Otoken_to_str(loc_id, &obj_token, &obj_addr_str);
+                HDsprintf(outstr, "xid_%s", obj_addr_str);
+                H5free_memory(obj_addr_str);
+
                 return 0;
             }
             else {
@@ -608,7 +618,9 @@ xml_name_to_XID(const char *str , char *outstr, int outlen, int gen)
         }
     }
 
-    HDsprintf(outstr, "xid_"H5_PRINTF_HADDR_FMT, objno);
+    H5Otoken_to_str(loc_id, &obj_token, &obj_addr_str);
+    HDsprintf(outstr, "xid_%s", obj_addr_str);
+    H5free_memory(obj_addr_str);
 
     return 0;
 }
@@ -878,12 +890,12 @@ xml_print_datatype(hid_t type, unsigned in_group)
     outputformat = &string_dataformat;
 
     if(!in_group && H5Tcommitted(type) > 0) {
-        H5O_info_t oinfo;
+        H5O_info2_t oinfo;
         obj_t  *found_obj;    /* Found object */
 
         /* detect a shared datatype, output only once */
-        H5Oget_info2(type, &oinfo, H5O_INFO_BASIC);
-        found_obj = search_obj(type_table, oinfo.addr);
+        H5Oget_info3(type, &oinfo, H5O_INFO_BASIC);
+        found_obj = search_obj(type_table, &oinfo.token);
 
         if(found_obj) {
             /* This should be defined somewhere else */
@@ -891,7 +903,7 @@ xml_print_datatype(hid_t type, unsigned in_group)
                probably will have something different eventually */
             char * dtxid = (char *)HDmalloc((size_t)100);
 
-            xml_name_to_XID(found_obj->objname, dtxid, 100, 1);
+            xml_name_to_XID(type, found_obj->objname, dtxid, 100, 1);
             if (!found_obj->recorded) {
                 /* 'anonymous' NDT.  Use it's object num.
                    as it's name.  */
@@ -1531,19 +1543,19 @@ xml_dump_datatype(hid_t type)
     dump_indent += COL;
 
     if(H5Tcommitted(type) > 0) {
-        H5O_info_t oinfo;
+        H5O_info2_t oinfo;
         obj_t  *found_obj;    /* Found object */
 
         /* Datatype is a shared or named datatype */
-        H5Oget_info2(type, &oinfo, H5O_INFO_BASIC);
-        found_obj = search_obj(type_table, oinfo.addr);
+        H5Oget_info3(type, &oinfo, H5O_INFO_BASIC);
+        found_obj = search_obj(type_table, &oinfo.token);
 
         if(found_obj) {
             /* Shared datatype, must be entered as an object  */
             /* These 2 cases are the same now, but may change */
             char *dtxid = (char *)HDmalloc((size_t)100);
 
-            xml_name_to_XID(found_obj->objname, dtxid, 100, 1);
+            xml_name_to_XID(type, found_obj->objname, dtxid, 100, 1);
             if (!found_obj->recorded) {
                 /* anonymous stored datatype:
                    following the dumper's current
@@ -1783,9 +1795,9 @@ xml_dump_dataspace(hid_t space)
 void
 xml_dump_data(hid_t obj_id, int obj_data, struct subset_t H5_ATTR_UNUSED *sset, int H5_ATTR_UNUSED pindex)
 {
-    hid_t               space = -1;
-    hid_t               type = -1;
-    hid_t               p_type = -1;
+    hid_t               space = H5I_INVALID_HID;
+    hid_t               type = H5I_INVALID_HID;
+    hid_t               p_type = H5I_INVALID_HID;
     hsize_t             size[64];
     hsize_t             nelmts = 1;
     int                 ndims;
@@ -1950,9 +1962,9 @@ herr_t
 xml_dump_attr(hid_t attr, const char *attr_name, const H5A_info_t H5_ATTR_UNUSED *info,
     void H5_ATTR_UNUSED * op_data)
 {
-    hid_t             attr_id = -1;
-    hid_t             type = -1;
-    hid_t             space = -1;
+    hid_t             attr_id = H5I_INVALID_HID;
+    hid_t             type = H5I_INVALID_HID;
+    hid_t             space = H5I_INVALID_HID;
     H5S_class_t       space_type;
     hsize_t           curr_pos = 0;        /* total data element position   */
     h5tools_str_t     buffer;              /* string into which to render   */
@@ -2293,8 +2305,8 @@ xml_dump_named_datatype(hid_t type, const char *name)
     t_prefix = xml_escape_the_name(prefix);
     t_name = xml_escape_the_name(name);
 
-    xml_name_to_XID(tmp, dtxid, 100, 1);
-    xml_name_to_XID(prefix, parentxid, 100, 1);
+    xml_name_to_XID(type, tmp, dtxid, 100, 1);
+    xml_name_to_XID(type, prefix, parentxid, 100, 1);
     if(HDstrncmp(name, "#", (size_t)1) == 0) {
         /*  Special:  this is an 'anonymous' NDT, deleted but
            still in use.
@@ -2317,7 +2329,7 @@ xml_dump_named_datatype(hid_t type, const char *name)
         h5tools_render_element(rawoutstream, outputformat, &ctx, &buffer, &curr_pos, (size_t)outputformat->line_ncols, (hsize_t)0, (hsize_t)0);
     }
     else {
-        H5O_info_t  oinfo;          /* Object info */
+        H5O_info2_t  oinfo;          /* Object info */
 
         ctx.need_prefix = TRUE;
 
@@ -2331,12 +2343,12 @@ xml_dump_named_datatype(hid_t type, const char *name)
         h5tools_render_element(rawoutstream, outputformat, &ctx, &buffer, &curr_pos, (size_t)outputformat->line_ncols, (hsize_t)0, (hsize_t)0);
 
         /* Check uniqueness of named datatype */
-        H5Oget_info2(type, &oinfo, H5O_INFO_BASIC);
+        H5Oget_info3(type, &oinfo, H5O_INFO_BASIC);
         if(oinfo.rc > 1) {
             obj_t       *found_obj;     /* Found object */
 
             /* Group with more than one link to it... */
-            found_obj = search_obj(type_table, oinfo.addr);
+            found_obj = search_obj(type_table, &oinfo.token);
 
             if (found_obj == NULL) {
                 indentation(dump_indent);
@@ -2353,7 +2365,7 @@ xml_dump_named_datatype(hid_t type, const char *name)
 
                 ctx.indent_level++;
 
-                xml_name_to_XID(found_obj->objname, pointerxid, (int)sizeof(pointerxid), 1);
+                xml_name_to_XID(type, found_obj->objname, pointerxid, (int)sizeof(pointerxid), 1);
 
                 ctx.need_prefix = TRUE;
 
@@ -2436,7 +2448,7 @@ done:
 void
 xml_dump_group(hid_t gid, const char *name)
 {
-    H5O_info_t              oinfo;
+    H5O_info2_t             oinfo;
     hid_t                   gcpl_id;
     hid_t                   dset, type;
     unsigned                crt_order_flags;
@@ -2517,13 +2529,13 @@ xml_dump_group(hid_t gid, const char *name)
         }
     }
 
-    H5Oget_info2(gid, &oinfo, H5O_INFO_BASIC);
+    H5Oget_info3(gid, &oinfo, H5O_INFO_BASIC);
 
     if(oinfo.rc > 1) {
         obj_t *found_obj;    /* Found object */
 
         /* Group with more than one link to it... */
-        found_obj = search_obj(group_table, oinfo.addr);
+        found_obj = search_obj(group_table, &oinfo.token);
 
         if (found_obj == NULL) {
             indentation(dump_indent);
@@ -2541,7 +2553,7 @@ xml_dump_group(hid_t gid, const char *name)
                 /* already seen: enter a groupptr */
                 if(isRoot) {
                     /* probably can't happen! */
-                    xml_name_to_XID("/", grpxid, 100, 1);
+                    xml_name_to_XID(gid, "/", grpxid, 100, 1);
 
                     ctx.need_prefix = TRUE;
 
@@ -2554,8 +2566,8 @@ xml_dump_group(hid_t gid, const char *name)
                 else {
                     t_objname = xml_escape_the_name(found_obj->objname);
                     par_name = xml_escape_the_name(par);
-                    xml_name_to_XID(tmp, grpxid, 100, 1);
-                    xml_name_to_XID(par, parentxid, 100, 1);
+                    xml_name_to_XID(gid, tmp, grpxid, 100, 1);
+                    xml_name_to_XID(gid, par, parentxid, 100, 1);
 
                     ctx.need_prefix = TRUE;
 
@@ -2573,8 +2585,8 @@ xml_dump_group(hid_t gid, const char *name)
 
                     t_objname = xml_escape_the_name(found_obj->objname);/* point to the NDT by name */
                     par_name = xml_escape_the_name(par);
-                    xml_name_to_XID(found_obj->objname, ptrstr, 100, 1);
-                    xml_name_to_XID(par, parentxid, 100, 1);
+                    xml_name_to_XID(gid, found_obj->objname, ptrstr, 100, 1);
+                    xml_name_to_XID(gid, par, parentxid, 100, 1);
 
                     ctx.need_prefix = TRUE;
 
@@ -2597,7 +2609,7 @@ xml_dump_group(hid_t gid, const char *name)
 
                 /* first time this group has been seen -- describe it  */
                 if(isRoot) {
-                    xml_name_to_XID("/", grpxid, 100, 1);
+                    xml_name_to_XID(gid, "/", grpxid, 100, 1);
 
                     ctx.need_prefix = TRUE;
 
@@ -2611,8 +2623,8 @@ xml_dump_group(hid_t gid, const char *name)
                     char *t_tmp = xml_escape_the_name(tmp);
 
                     par_name = xml_escape_the_name(par);
-                    xml_name_to_XID(tmp, grpxid, 100, 1);
-                    xml_name_to_XID(par, parentxid, 100, 1);
+                    xml_name_to_XID(gid, tmp, grpxid, 100, 1);
+                    xml_name_to_XID(gid, par, parentxid, 100, 1);
 
                     ctx.need_prefix = TRUE;
 
@@ -2652,9 +2664,15 @@ xml_dump_group(hid_t gid, const char *name)
                     /* Very special case: dump unamed type in root group */
                     for(u = 0; u < type_table->nobjs; u++) {
                         if(!type_table->objs[u].recorded) {
+                            char *obj_addr_str = NULL;
+
                             dset = H5Dopen2(gid, type_table->objs[u].objname, H5P_DEFAULT);
                             type = H5Dget_type(dset);
-                            HDsprintf(type_name, "#"H5_PRINTF_HADDR_FMT, type_table->objs[u].objno);
+
+                            H5Otoken_to_str(dset, &type_table->objs[u].obj_token, &obj_addr_str);
+                            HDsprintf(type_name, "#%s", obj_addr_str);
+                            H5free_memory(obj_addr_str);
+
                             dump_function_table->dump_named_datatype_function(type, type_name);
                             H5Tclose(type);
                             H5Dclose(dset);
@@ -2665,9 +2683,9 @@ xml_dump_group(hid_t gid, const char *name)
                 /* iterate through all the links */
 
                 if((sort_by == H5_INDEX_CRT_ORDER) && (crt_order_flags & H5P_CRT_ORDER_TRACKED))
-                    H5Literate(gid, sort_by, sort_order, NULL, xml_dump_all_cb, NULL);
+                    H5Literate2(gid, sort_by, sort_order, NULL, xml_dump_all_cb, NULL);
                 else
-                    H5Literate(gid, H5_INDEX_NAME, sort_order, NULL, xml_dump_all_cb, NULL);
+                    H5Literate2(gid, H5_INDEX_NAME, sort_order, NULL, xml_dump_all_cb, NULL);
 
                 dump_indent -= COL;
                 ctx.indent_level--;
@@ -2689,15 +2707,15 @@ xml_dump_group(hid_t gid, const char *name)
         h5tools_str_reset(&buffer);
 
         if(isRoot) {
-            xml_name_to_XID("/", grpxid, 100, 1);
+            xml_name_to_XID(gid, "/", grpxid, 100, 1);
             h5tools_str_append(&buffer, "<%sRootGroup OBJ-XID=\"%s\" H5Path=\"%s\">", xmlnsprefix, grpxid, "/");
         }
         else {
             char *t_tmp = xml_escape_the_name(tmp);
 
             par_name = xml_escape_the_name(par);
-            xml_name_to_XID(tmp, grpxid, 100, 1);
-            xml_name_to_XID(par, parentxid, 100, 1);
+            xml_name_to_XID(gid, tmp, grpxid, 100, 1);
+            xml_name_to_XID(gid, par, parentxid, 100, 1);
             h5tools_str_append(&buffer, "<%sGroup Name=\"%s\" OBJ-XID=\"%s\" H5Path=\"%s\" "
                     "Parents=\"%s\" H5ParentPaths=\"%s\" >",
                     xmlnsprefix, t_name, grpxid, t_tmp, parentxid, par_name);
@@ -2734,9 +2752,15 @@ xml_dump_group(hid_t gid, const char *name)
             /* Very special case: dump unamed type in root group */
             for(u = 0; u < type_table->nobjs; u++) {
                 if(!type_table->objs[u].recorded) {
+                    char *obj_addr_str = NULL;
+
                     dset = H5Dopen2(gid, type_table->objs[u].objname, H5P_DEFAULT);
                     type = H5Dget_type(dset);
-                    HDsprintf(type_name, "#"H5_PRINTF_HADDR_FMT, type_table->objs[u].objno);
+
+                    H5Otoken_to_str(dset, &type_table->objs[u].obj_token, &obj_addr_str);
+                    HDsprintf(type_name, "#%s", obj_addr_str);
+                    H5free_memory(obj_addr_str);
+
                     dump_function_table->dump_named_datatype_function(type, type_name);
                     H5Tclose(type);
                     H5Dclose(dset);
@@ -2747,9 +2771,9 @@ xml_dump_group(hid_t gid, const char *name)
         /* iterate through all the links */
 
         if((sort_by == H5_INDEX_CRT_ORDER) && (crt_order_flags & H5P_CRT_ORDER_TRACKED))
-            H5Literate(gid, sort_by, sort_order, NULL, xml_dump_all_cb, NULL);
+            H5Literate2(gid, sort_by, sort_order, NULL, xml_dump_all_cb, NULL);
         else
-            H5Literate(gid, H5_INDEX_NAME, sort_order, NULL, xml_dump_all_cb, NULL);
+            H5Literate2(gid, H5_INDEX_NAME, sort_order, NULL, xml_dump_all_cb, NULL);
 
         dump_indent -= COL;
         ctx.indent_level--;
@@ -2787,12 +2811,11 @@ static int
 xml_print_refs(hid_t did, int source)
 {
     herr_t            e;
-    hid_t             type    = -1;
-    hid_t             space   = -1;
+    hid_t             type    = H5I_INVALID_HID;
+    hid_t             space   = H5I_INVALID_HID;
     hssize_t          ssiz    = -1;
     hsize_t           i;
-    size_t            tsiz;
-    hobj_ref_t       *refbuf = NULL;
+    H5R_ref_t        *refbuf = NULL;
     char             *buf = NULL;
     h5tools_str_t     buffer;          /* string into which to render   */
     h5tools_context_t ctx;             /* print context  */
@@ -2823,13 +2846,11 @@ xml_print_refs(hid_t did, int source)
         space = H5Dget_space(did);
         if ((ssiz = H5Sget_simple_extent_npoints(space)) < 0)
             goto error;
-        if ((tsiz = H5Tget_size(type)) == 0)
-            goto error;
 
-        buf = (char *) HDcalloc((size_t)ssiz, tsiz);
+        buf = (char *) HDcalloc((size_t)ssiz, sizeof(H5R_ref_t));
         if (buf == NULL)
             goto error;
-        e = H5Dread(did, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf);
+        e = H5Dread(did, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf);
         /* need to check result here */
         if (e < 0)
             goto error;
@@ -2838,19 +2859,17 @@ xml_print_refs(hid_t did, int source)
         space = H5Aget_space(did);
         if ((ssiz = H5Sget_simple_extent_npoints(space)) < 0)
             goto error;
-        if ((tsiz = H5Tget_size(type)) == 0)
-            goto error;
 
-        buf = (char *) HDcalloc((size_t)ssiz, tsiz);
+        buf = (char *) HDcalloc((size_t)ssiz, sizeof(H5R_ref_t));
         if (buf == NULL)
             goto error;
-        e = H5Aread(did, H5T_STD_REF_OBJ, buf);
+        e = H5Aread(did, H5T_STD_REF, buf);
         /* need to check the result here */
         if (e < 0)
             goto error;
     }
 
-    refbuf = (hobj_ref_t *)((void *)buf);
+    refbuf = (H5R_ref_t *)((void *)buf);
 
     /* setup */
     HDmemset(&buffer, 0, sizeof(h5tools_str_t));
@@ -2901,6 +2920,8 @@ xml_print_refs(hid_t did, int source)
         }
         ctx.indent_level--;
 
+        H5Rdestroy(refbuf);
+
         refbuf++;
     }
 
@@ -2936,8 +2957,8 @@ static int
 xml_print_strs(hid_t did, int source)
 {
     herr_t            e;
-    hid_t             type    = -1;
-    hid_t             space   = -1;
+    hid_t             type    = H5I_INVALID_HID;
+    hid_t             space   = H5I_INVALID_HID;
     hssize_t          ssiz    = -1;
     htri_t            is_vlstr = FALSE;
     size_t            tsiz    = 0;
@@ -3290,7 +3311,7 @@ xml_dump_fill_value(hid_t dcpl, hid_t type)
     H5Pget_fill_value(dcpl, type, buf);
 
     if (H5Tget_class(type) == H5T_REFERENCE) {
-        const char * path = lookup_ref_path(*(hobj_ref_t *) buf);
+        const char * path = lookup_ref_path(*(H5R_ref_t *) buf);
 
         ctx.need_prefix = TRUE;
 
@@ -3324,6 +3345,8 @@ xml_dump_fill_value(hid_t dcpl, hid_t type)
         h5tools_str_reset(&buffer);
         h5tools_str_append(&buffer, "</%sDataFromFile>", xmlnsprefix);
         h5tools_render_element(rawoutstream, outputformat, &ctx, &buffer, &curr_pos, (size_t)outputformat->line_ncols, (hsize_t)0, (hsize_t)0);
+
+        H5Rdestroy((H5R_ref_t *) buf);
     }
     else if (H5Tget_class(type) == H5T_STRING) {
         /* ????? */
@@ -3610,8 +3633,8 @@ xml_dump_dataset(hid_t did, const char *name, struct subset_t H5_ATTR_UNUSED *ss
     string_dataformat.do_escape = display_escape;
     outputformat = &string_dataformat;
 
-    xml_name_to_XID(tmp, rstr, 100, 1);
-    xml_name_to_XID(prefix, pstr, 100, 1);
+    xml_name_to_XID(did, tmp, rstr, 100, 1);
+    xml_name_to_XID(did, prefix, pstr, 100, 1);
 
     ctx.need_prefix = TRUE;
 
@@ -4121,7 +4144,7 @@ xml_print_enum(hid_t type)
     unsigned char      *value = NULL;   /*value array                    */
     unsigned            nmembs;         /*number of members              */
     hid_t               super;          /*enum base integer type         */
-    hid_t               native = -1;    /*native integer datatype        */
+    hid_t               native = H5I_INVALID_HID;    /*native integer datatype        */
     size_t              dst_size;       /*destination value type size    */
     unsigned            i;              /*miscellaneous counters         */
     size_t              j;
diff --git a/tools/src/h5format_convert/h5format_convert.c b/tools/src/h5format_convert/h5format_convert.c
index 257a047..bb606ac 100644
--- a/tools/src/h5format_convert/h5format_convert.c
+++ b/tools/src/h5format_convert/h5format_convert.c
@@ -219,8 +219,8 @@ leave(int ret)
 static int
 convert(hid_t fid, const char *dname)
 {
-    hid_t dcpl = -1;
-    hid_t did = -1;
+    hid_t dcpl = H5I_INVALID_HID;
+    hid_t did = H5I_INVALID_HID;
     H5D_layout_t layout_type;
     H5D_chunk_index_t idx_type;
 
@@ -362,7 +362,7 @@ error:
  *-------------------------------------------------------------------------
  */
 static int
-convert_dsets_cb(const char *path, const H5O_info_t *oi, const char *already_visited, void *_fid)
+convert_dsets_cb(const char *path, const H5O_info2_t *oi, const char *already_visited, void *_fid)
 {
     hid_t fid = *(hid_t *)_fid;
 
@@ -399,7 +399,7 @@ main(int argc, const char *argv[])
 {
     H5E_auto2_t func;
     void *edata;
-    hid_t fid = -1;
+    hid_t fid = H5I_INVALID_HID;
 
     h5tools_setprogname(PROGRAMNAME);
     h5tools_setstatus(EXIT_SUCCESS);
diff --git a/tools/src/h5import/h5import.c b/tools/src/h5import/h5import.c
index a8cbc10..0c0e0fb 100644
--- a/tools/src/h5import/h5import.c
+++ b/tools/src/h5import/h5import.c
@@ -1089,12 +1089,12 @@ out:
  */
 static int processStrHDFData(FILE *strm, struct Input *in, hid_t file_id)
 {
-    hid_t   group_id    = -1;
-    hid_t   dset_id     = -1;
-    hid_t   space_id    = -1;
-    hid_t   mspace_id   = -1;
-    hid_t   type_id     = -1;
-    hid_t   handle      = -1;
+    hid_t   group_id    = H5I_INVALID_HID;
+    hid_t   dset_id     = H5I_INVALID_HID;
+    hid_t   space_id    = H5I_INVALID_HID;
+    hid_t   mspace_id   = H5I_INVALID_HID;
+    hid_t   type_id     = H5I_INVALID_HID;
+    hid_t   handle      = H5I_INVALID_HID;
     char   *str1        = NULL;
     char   *str2        = NULL;
     char   *str3        = NULL;
diff --git a/tools/src/h5jam/h5jam.c b/tools/src/h5jam/h5jam.c
index 8222e06..07797c8 100644
--- a/tools/src/h5jam/h5jam.c
+++ b/tools/src/h5jam/h5jam.c
@@ -197,8 +197,8 @@ main (int argc, const char *argv[])
     int         ofid = -1;
     void       *edata;
     H5E_auto2_t func;
-    hid_t       ifile = -1;
-    hid_t       plist = -1;
+    hid_t       ifile = H5I_INVALID_HID;
+    hid_t       plist = H5I_INVALID_HID;
     herr_t      status;
     htri_t      testval;
     hsize_t     usize;
diff --git a/tools/src/h5jam/h5unjam.c b/tools/src/h5jam/h5unjam.c
index aa893f9..203522b 100644
--- a/tools/src/h5jam/h5unjam.c
+++ b/tools/src/h5jam/h5unjam.c
@@ -199,8 +199,8 @@ main(int argc, const char *argv[])
 {
     void               *edata;
     H5E_auto2_t         func;
-    hid_t               ifile = -1;
-    hid_t               plist = -1;
+    hid_t               ifile = H5I_INVALID_HID;
+    hid_t               plist = H5I_INVALID_HID;
     off_t               fsize;
     hsize_t             usize;
     htri_t              testval;
diff --git a/tools/src/h5ls/h5ls.c b/tools/src/h5ls/h5ls.c
index 03e7bed..88f1d2b 100644
--- a/tools/src/h5ls/h5ls.c
+++ b/tools/src/h5ls/h5ls.c
@@ -879,7 +879,7 @@ print_enum_type(h5tools_str_t *buffer, hid_t type, int ind)
     if (nmembs > 0) {
         char        **name;         /* member names */
         unsigned char *value;       /* value array */
-        hid_t       native = -1;    /* native integer data type */
+        hid_t       native = H5I_INVALID_HID;    /* native integer data type */
         size_t      dst_size;       /* destination value type size */
         unsigned    i;              /* miscellaneous counters */
 
@@ -1260,10 +1260,17 @@ print_type(h5tools_str_t *buffer, hid_t type, int ind)
 
     /* Shared? If so then print the type's OID */
     if (H5Tcommitted(type)) {
-        H5O_info_t  oi;
+        H5O_info2_t oi;
 
-        if (H5Oget_info2(type, &oi, H5O_INFO_BASIC) >= 0)
-            h5tools_str_append(buffer,"shared-%lu:"H5_PRINTF_HADDR_FMT" ", oi.fileno, oi.addr);
+        if (H5Oget_info3(type, &oi, H5O_INFO_BASIC) >= 0) {
+            char *type_string = NULL;
+
+            H5Otoken_to_str(type, &oi.token, &type_string);
+
+            h5tools_str_append(buffer,"shared-%lu:%s", oi.fileno, type_string);
+
+            H5free_memory(type_string);
+        } /* end if */
         else
             h5tools_str_append(buffer,"shared ");
     } /* end if */
@@ -2284,7 +2291,7 @@ datatype_list2(hid_t type, const char H5_ATTR_UNUSED *name)
  *-------------------------------------------------------------------------
  */
 static herr_t
-list_obj(const char *name, const H5O_info_t *oinfo, const char *first_seen, void *_iter)
+list_obj(const char *name, const H5O_info2_t *oinfo, const char *first_seen, void *_iter)
 {
     H5O_type_t          obj_type = oinfo->type;          /* Type of the object */
     iter_t             *iter = (iter_t*)_iter;
@@ -2355,6 +2362,7 @@ list_obj(const char *name, const H5O_info_t *oinfo, const char *first_seen, void
         if (verbose_g > 0) {
             size_t buf_size = 0;
             char* comment = NULL;
+            char* obj_addr_str = NULL;
             ssize_t cmt_bufsize = -1;
 
             /* Display attributes */
@@ -2363,11 +2371,15 @@ list_obj(const char *name, const H5O_info_t *oinfo, const char *first_seen, void
                 H5Aiterate2(obj, H5_INDEX_NAME, H5_ITER_INC, NULL, list_attr, NULL);
 
             /* Object location & reference count */
+            H5Otoken_to_str(obj, &oinfo->token, &obj_addr_str);
+
             h5tools_str_reset(&buffer);
-            h5tools_str_append(&buffer, "    %-10s %lu:"H5_PRINTF_HADDR_FMT"\n", "Location:", oinfo->fileno, oinfo->addr);
+            h5tools_str_append(&buffer, "    %-10s %lu:%s\n", "Location:", oinfo->fileno, obj_addr_str);
             h5tools_str_append(&buffer, "    %-10s %u\n", "Links:", (unsigned)oinfo->rc);
             h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0);
 
+            H5free_memory(obj_addr_str);
+
             /* Modification time */
             if (oinfo->mtime > 0) {
                 char buf[256];
@@ -2442,7 +2454,7 @@ done:
  *-------------------------------------------------------------------------
  */
 static herr_t
-list_lnk(const char *name, const H5L_info_t *linfo, void *_iter)
+list_lnk(const char *name, const H5L_info2_t *linfo, void *_iter)
 {
     char   *buf = NULL;
     iter_t *iter = (iter_t*)_iter;
@@ -2628,7 +2640,7 @@ static herr_t
 visit_obj(hid_t file, const char *oname, iter_t *iter)
 {
     int                 retval = 0;
-    H5O_info_t          oi;              /* Information for object */
+    H5O_info2_t         oi;              /* Information for object */
     hsize_t             curr_pos = 0;    /* total data element position   */
     h5tools_str_t       buffer;          /* string into which to render   */
     h5tools_context_t   ctx;             /* print context  */
@@ -2640,7 +2652,7 @@ visit_obj(hid_t file, const char *oname, iter_t *iter)
     h5tools_str_reset(&buffer);
 
     /* Retrieve info for object to list */
-    if (H5Oget_info_by_name2(file, oname, &oi, H5O_INFO_BASIC|H5O_INFO_TIME, H5P_DEFAULT) < 0) {
+    if (H5Oget_info_by_name3(file, oname, &oi, H5O_INFO_BASIC|H5O_INFO_TIME, H5P_DEFAULT) < 0) {
         if (iter->symlink_target) {
             h5tools_str_append(&buffer, "{**NOT FOUND**}\n");
             iter->symlink_target = FALSE;
@@ -2821,7 +2833,7 @@ leave(int ret)
 int
 main(int argc, const char *argv[])
 {
-    hid_t       file = H5I_INVALID_HID;
+    hid_t       file_id = H5I_INVALID_HID;
     char       *fname = NULL, *oname = NULL, *x;
     const char *s = NULL;
     char       *rest;
@@ -3279,24 +3291,24 @@ main(int argc, const char *argv[])
      * doesn't exist). */
     show_file_name_g = (argc-argno > 1); /*show file names if more than one*/
     while(argno < argc) {
-        H5L_info_t li;
+        H5L_info2_t li;
         iter_t iter;
         symlink_trav_t symlink_list;
         size_t u;
 
         fname = HDstrdup(argv[argno++]);
         oname = NULL;
-        file = -1;
+        file_id = H5I_INVALID_HID;
 
         while (fname && *fname) {
             if (fapl_id != H5P_DEFAULT) {
-                file = H5Fopen(fname, H5F_ACC_RDONLY, fapl_id);
+                file_id = H5Fopen(fname, H5F_ACC_RDONLY, fapl_id);
             }
             else {
-                file = h5tools_fopen(fname, H5F_ACC_RDONLY, H5P_DEFAULT, preferred_driver, drivername, sizeof drivername);
+                file_id = h5tools_fopen(fname, H5F_ACC_RDONLY, H5P_DEFAULT, preferred_driver, drivername, sizeof drivername);
             }
 
-            if (file >= 0) {
+            if (file_id >= 0) {
                 if (verbose_g)
                     PRINTSTREAM(rawoutstream, "Opened \"%s\" with %s driver.\n", fname, drivername);
                 break; /*success*/
@@ -3312,7 +3324,7 @@ main(int argc, const char *argv[])
             *oname = '\0';
         } /* end while */
 
-        if (file < 0) {
+        if (file_id < 0) {
             HDfprintf(rawerrorstream, "%s: unable to open file\n", argv[argno-1]);
             HDfree(fname);
             err_exit = 1;
@@ -3347,8 +3359,8 @@ main(int argc, const char *argv[])
 
         /* Remember the file information for later */
         iter.fname = fname;
-        iter.fid = file;
-        iter.gid = -1;
+        iter.fid = file_id;
+        iter.gid = H5I_INVALID_HID;
         iter.symlink_target = FALSE;
         iter.symlink_list = &symlink_list;
         iter.symlink_list->dangle_link = FALSE;
@@ -3360,7 +3372,7 @@ main(int argc, const char *argv[])
         /* Check for root group as object name */
         if (HDstrcmp(oname, root_name)) {
             /* Check the type of link given */
-            if (H5Lget_info(file, oname, &li, H5P_DEFAULT) < 0) {
+            if (H5Lget_info2(file_id, oname, &li, H5P_DEFAULT) < 0) {
                 hsize_t             curr_pos = 0;        /* total data element position   */
                 h5tools_str_t       buffer;          /* string into which to render   */
                 h5tools_context_t   ctx;             /* print context  */
@@ -3381,18 +3393,18 @@ main(int argc, const char *argv[])
 
         /* Open the object and display it's information */
         if (li.type == H5L_TYPE_HARD) {
-            if (visit_obj(file, oname, &iter) < 0) {
+            if (visit_obj(file_id, oname, &iter) < 0) {
                 H5Eset_auto2(H5E_DEFAULT, func, edata);
                 leave(EXIT_FAILURE);
             }
         } /* end if(li.type == H5L_TYPE_HARD) */
         else {
             /* Specified name is not for object -- list that link */
-            /* Use file ID for root group ID */
-            iter.gid = file;
+            /* Use file_id ID for root group ID */
+            iter.gid = file_id;
             list_lnk(oname, &li, &iter);
         }
-        H5Fclose(file);
+        H5Fclose(file_id);
         HDfree(fname);
         if (x)
             HDfree(oname);
diff --git a/tools/src/h5repack/h5repack.c b/tools/src/h5repack/h5repack.c
index 6f0e4eb..8eeaa0e 100644
--- a/tools/src/h5repack/h5repack.c
+++ b/tools/src/h5repack/h5repack.c
@@ -222,18 +222,27 @@ h5repack_addlayout(const char *str, pack_opt_t *options)
 hid_t
 copy_named_datatype(hid_t type_in, hid_t fidout, named_dt_t **named_dt_head_p, trav_table_t *travt, pack_opt_t *options)
 {
-    named_dt_t *dt = *named_dt_head_p; /* Stack pointer */
-    named_dt_t *dt_ret = NULL;         /* Datatype to return */
-    H5O_info_t  oinfo;                 /* Object info of input dtype */
-    hid_t       ret_value = H5I_INVALID_HID;
+    named_dt_t  *dt = *named_dt_head_p; /* Stack pointer */
+    named_dt_t  *dt_ret = NULL;         /* Datatype to return */
+    H5O_info2_t  oinfo;                 /* Object info of input dtype */
+    int          token_cmp;
+    hid_t        ret_value = H5I_INVALID_HID;
 
-    if (H5Oget_info2(type_in, &oinfo, H5O_INFO_BASIC) < 0)
+    if (H5Oget_info3(type_in, &oinfo, H5O_INFO_BASIC) < 0)
         H5TOOLS_GOTO_ERROR(H5I_INVALID_HID, "H5Oget_info failed");
 
     if (*named_dt_head_p) {
+        if (H5Otoken_cmp(type_in, &dt->obj_token, &oinfo.token, &token_cmp) < 0)
+            H5TOOLS_GOTO_ERROR(H5I_INVALID_HID, "failed to compare object tokens");
+
         /* Stack already exists, search for the datatype */
-        while (dt && dt->addr_in != oinfo.addr)
+        while (dt && token_cmp) {
             dt = dt->next;
+
+            if (H5Otoken_cmp(type_in, &dt->obj_token, &oinfo.token, &token_cmp) < 0)
+                H5TOOLS_GOTO_ERROR(H5I_INVALID_HID, "failed to compare object tokens");
+        }
+
         dt_ret = dt;
     }
     else {
@@ -249,13 +258,14 @@ copy_named_datatype(hid_t type_in, hid_t fidout, named_dt_t **named_dt_head_p, t
                 *named_dt_head_p = dt;
 
                 /* Update the address and id */
-                dt->addr_in = travt->objs[i].objno;
-                dt->id_out = -1;
+                HDmemcpy(&dt->obj_token, &travt->objs[i].obj_token, sizeof(H5O_token_t));
+                dt->id_out = H5I_INVALID_HID;
 
                 /* Check if this type is the one requested */
-                if (oinfo.addr == dt->addr_in) {
+                if (H5Otoken_cmp(type_in, &oinfo.token, &dt->obj_token, &token_cmp) < 0)
+                    H5TOOLS_GOTO_ERROR(H5I_INVALID_HID, "failed to compare object tokens");
+                if (!token_cmp)
                     dt_ret = dt;
-                }
             } /* end if named datatype */
         } /* end for each object in traversal table */
     } /* end else (create the stack) */
@@ -271,8 +281,8 @@ copy_named_datatype(hid_t type_in, hid_t fidout, named_dt_t **named_dt_head_p, t
         *named_dt_head_p = dt_ret;
 
         /* Update the address and id */
-        dt_ret->addr_in = oinfo.addr;
-        dt_ret->id_out = -1;
+        HDmemcpy(&dt_ret->obj_token, &oinfo.token, sizeof(H5O_token_t));
+        dt_ret->id_out = H5I_INVALID_HID;
     } /* end if requested datatype not found */
 
     /* If the requested datatype does not yet exist in the output file, copy it
@@ -343,11 +353,11 @@ done:
 int
 copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, trav_table_t *travt, pack_opt_t *options)
 {
-    hid_t       attr_id = -1;  /* attr ID */
-    hid_t       attr_out = -1; /* attr ID */
-    hid_t       space_id = -1; /* space ID */
-    hid_t       ftype_id = -1; /* file type ID */
-    hid_t       wtype_id = -1; /* read/write type ID */
+    hid_t       attr_id = H5I_INVALID_HID;  /* attr ID */
+    hid_t       attr_out = H5I_INVALID_HID; /* attr ID */
+    hid_t       space_id = H5I_INVALID_HID; /* space ID */
+    hid_t       ftype_id = H5I_INVALID_HID; /* file type ID */
+    hid_t       wtype_id = H5I_INVALID_HID; /* read/write type ID */
     size_t      msize;         /* size of type */
     void       *buf = NULL;    /* data buffer */
     hsize_t     nelmts;        /* number of elements in dataset */
@@ -355,14 +365,14 @@ copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, trav_table_
     htri_t      is_named;      /* Whether the datatype is named */
     hsize_t     dims[H5S_MAX_RANK];/* dimensions of dataset */
     char        name[255];
-    H5O_info_t  oinfo;         /* object info */
+    H5O_info2_t oinfo;         /* object info */
     int         j;
     unsigned    u;
     hbool_t     is_ref = 0;
     H5T_class_t type_class = -1;
     int         ret_value = 0;
 
-    if (H5Oget_info2(loc_in, &oinfo, H5O_INFO_NUM_ATTRS) < 0)
+    if (H5Oget_info3(loc_in, &oinfo, H5O_INFO_NUM_ATTRS) < 0)
         H5TOOLS_GOTO_ERROR((-1), "H5Oget_info failed");
 
     /*-------------------------------------------------------------------------
@@ -385,7 +395,7 @@ copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, trav_table_
         if ((is_named = H5Tcommitted(ftype_id)) < 0)
             H5TOOLS_GOTO_ERROR((-1), "H5Tcommitted failed");
         if (is_named && travt) {
-            hid_t fidout = -1;
+            hid_t fidout = H5I_INVALID_HID;
 
             /* Create out file id */
             if ((fidout = H5Iget_file_id(loc_out)) < 0)
@@ -432,7 +442,7 @@ copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, trav_table_
         type_class = H5Tget_class(wtype_id);
         is_ref = (type_class == H5T_REFERENCE);
         if (type_class == H5T_VLEN || type_class == H5T_ARRAY) {
-            hid_t base_type = -1;
+            hid_t base_type = H5I_INVALID_HID;
 
             base_type = H5Tget_super(ftype_id);
             is_ref = (is_ref || (H5Tget_class(base_type) == H5T_REFERENCE));
@@ -500,16 +510,16 @@ copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, trav_table_
          */
         if (H5Sclose(space_id) < 0)
             H5TOOLS_GOTO_ERROR((-1), "H5Sclose failed");
-        space_id = -1;
+        space_id = H5I_INVALID_HID;
         if (H5Tclose(wtype_id) < 0)
             H5TOOLS_GOTO_ERROR((-1), "H5Tclose failed");
-        wtype_id = -1;
+        wtype_id = H5I_INVALID_HID;
         if (H5Tclose(ftype_id) < 0)
             H5TOOLS_GOTO_ERROR((-1), "H5Tclose failed");
-        ftype_id = -1;
+        ftype_id = H5I_INVALID_HID;
         if (H5Aclose(attr_id) < 0)
             H5TOOLS_GOTO_ERROR((-1), "H5Aclose failed");
-        attr_id = -1;
+        attr_id = H5I_INVALID_HID;
     } /* for u (each attribute) */
 
 done:
@@ -725,9 +735,9 @@ done:
 static int
 check_objects(const char* fname, pack_opt_t *options)
 {
-    hid_t         fid = -1;
-    hid_t         did = -1;
-    hid_t         sid = -1;
+    hid_t         fid = H5I_INVALID_HID;
+    hid_t         did = H5I_INVALID_HID;
+    hid_t         sid = H5I_INVALID_HID;
     unsigned int  i;
     int           ifil;
     trav_table_t *travt = NULL;
@@ -752,7 +762,7 @@ check_objects(const char* fname, pack_opt_t *options)
     /* Initialize indexing options */
     h5trav_set_index(sort_by, sort_order);
     /* init table */
-    trav_table_init(&travt);
+    trav_table_init(fid, &travt);
 
     /* get the list of objects in the file */
     if (h5trav_gettable(fid, travt) < 0)
diff --git a/tools/src/h5repack/h5repack.h b/tools/src/h5repack/h5repack.h
index a0e0387..52ecb0e 100644
--- a/tools/src/h5repack/h5repack.h
+++ b/tools/src/h5repack/h5repack.h
@@ -131,7 +131,7 @@ typedef struct {
 
 
 typedef struct named_dt_t {
-    haddr_t             addr_in;    /* Address of the named dtype in the in file */
+    H5O_token_t         obj_token;  /* Object token for the named dtype in the in file */
     hid_t               id_out;     /* Open identifier for the dtype in the out file */
     struct named_dt_t   *next;      /* Next dtype */
 } named_dt_t;
diff --git a/tools/src/h5repack/h5repack_copy.c b/tools/src/h5repack/h5repack_copy.c
index 613606f..1044244 100644
--- a/tools/src/h5repack/h5repack_copy.c
+++ b/tools/src/h5repack/h5repack_copy.c
@@ -61,11 +61,11 @@ static void print_user_block(const char *filename, hid_t fid);
 int
 copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options)
 {
-    hid_t         fidin = -1;
-    hid_t         fidout = -1;
-    hid_t         fcpl_in = -1;  /* file creation property list ID for input file */
-    hid_t         grp_in = -1;   /* group ID */
-    hid_t         gcpl_in = -1;  /* group creation property list */
+    hid_t         fidin = H5I_INVALID_HID;
+    hid_t         fidout = H5I_INVALID_HID;
+    hid_t         fcpl_in = H5I_INVALID_HID;  /* file creation property list ID for input file */
+    hid_t         grp_in = H5I_INVALID_HID;   /* group ID */
+    hid_t         gcpl_in = H5I_INVALID_HID;  /* group creation property list */
     hid_t         fcpl = H5P_DEFAULT;     /* file creation property list ID */
     hid_t         fapl = H5P_DEFAULT;     /* file access property list ID */
     trav_table_t *travt = NULL;
@@ -316,7 +316,7 @@ print_user_block(fnamein, fidin);
     /* Initialize indexing options */
     h5trav_set_index(sort_by, sort_order);
     /* init table */
-    trav_table_init(&travt);
+    trav_table_init(fidin, &travt);
 
     if (travt) {
         /* get the list of objects in the file */
@@ -580,19 +580,19 @@ int
 do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
         pack_opt_t *options) /* repack options */
 {
-    hid_t grp_in = -1;   /* group ID */
-    hid_t grp_out = -1;  /* group ID */
-    hid_t dset_in = -1;  /* read dataset ID */
-    hid_t dset_out = -1; /* write dataset ID */
-    hid_t gcpl_in = -1;  /* group creation property list */
-    hid_t gcpl_out = -1; /* group creation property list */
-    hid_t type_in = -1;  /* named type ID */
-    hid_t type_out = -1; /* named type ID */
-    hid_t dcpl_in = -1;  /* dataset creation property list ID */
-    hid_t dcpl_out = -1; /* dataset creation property list ID */
-    hid_t f_space_id = -1; /* file space ID */
-    hid_t ftype_id = -1; /* file type ID */
-    hid_t wtype_id = -1; /* read/write type ID */
+    hid_t grp_in = H5I_INVALID_HID;   /* group ID */
+    hid_t grp_out = H5I_INVALID_HID;  /* group ID */
+    hid_t dset_in = H5I_INVALID_HID;  /* read dataset ID */
+    hid_t dset_out = H5I_INVALID_HID; /* write dataset ID */
+    hid_t gcpl_in = H5I_INVALID_HID;  /* group creation property list */
+    hid_t gcpl_out = H5I_INVALID_HID; /* group creation property list */
+    hid_t type_in = H5I_INVALID_HID;  /* named type ID */
+    hid_t type_out = H5I_INVALID_HID; /* named type ID */
+    hid_t dcpl_in = H5I_INVALID_HID;  /* dataset creation property list ID */
+    hid_t dcpl_out = H5I_INVALID_HID; /* dataset creation property list ID */
+    hid_t f_space_id = H5I_INVALID_HID; /* file space ID */
+    hid_t ftype_id = H5I_INVALID_HID; /* file type ID */
+    hid_t wtype_id = H5I_INVALID_HID; /* read/write type ID */
     named_dt_t *named_dt_head = NULL; /* Pointer to the stack of named datatypes copied */
     size_t msize;        /* size of type */
     hsize_t nelmts;      /* number of elements in dataset */
@@ -946,7 +946,7 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
                                     hsize_t zero[8]; /*vector of zeros */
                                     int k;
                                     H5D_layout_t dset_layout;
-                                    hid_t dcpl_tmp = -1; /* dataset creation property list ID */
+                                    hid_t dcpl_tmp = H5I_INVALID_HID; /* dataset creation property list ID */
 
                                     /* check if we have VL data in the dataset's datatype */
                                     if (H5Tdetect_class(wtype_id, H5T_VLEN) == TRUE)
@@ -1095,7 +1095,7 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
                  *-------------------------------------------------------------------------
                  */
                 else {
-                    hid_t pid = -1;
+                    hid_t pid = H5I_INVALID_HID;
 
                     /* create property to pass copy options */
                     if ((pid = H5Pcreate(H5P_OBJECT_COPY)) < 0)
@@ -1167,7 +1167,7 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
                     H5TOOLS_GOTO_ERROR((-1), "H5Tclose failed");
                 if (H5Tclose(type_out) < 0)
                     H5TOOLS_GOTO_ERROR((-1), "H5Tclose failed");
-                type_out = -1; /* named datatypes stack, named_dt_head, manages allocation */
+                type_out = H5I_INVALID_HID; /* named datatypes stack, named_dt_head, manages allocation */
 
                 break;
 
@@ -1429,7 +1429,7 @@ print_user_block(const char *filename, hid_t fid)
     int     fh = -1;   /* file handle */
     hsize_t ub_size;   /* user block size */
     hsize_t size;      /* size read */
-    hid_t   fcpl = -1; /* file creation property list ID for HDF5 file */
+    hid_t   fcpl = H5I_INVALID_HID; /* file creation property list ID for HDF5 file */
     int     i;
     int     ret_value = 0;
 
diff --git a/tools/src/h5repack/h5repack_refs.c b/tools/src/h5repack/h5repack_refs.c
index a7fbd3a..e6a747d 100644
--- a/tools/src/h5repack/h5repack_refs.c
+++ b/tools/src/h5repack/h5repack_refs.c
@@ -42,15 +42,15 @@ int do_copy_refobjs(hid_t fidin,
                     trav_table_t *travt,
                     pack_opt_t *options) /* repack options */
 {
-    hid_t     grp_in = -1;            /* read group ID */
-    hid_t     grp_out = -1;           /* write group ID */
-    hid_t     dset_in = -1;           /* read dataset ID */
-    hid_t     dset_out = -1;          /* write dataset ID */
-    hid_t     type_in = -1;           /* named type ID */
-    hid_t     dcpl_id = -1;           /* dataset creation property list ID */
-    hid_t     space_id = -1;          /* space ID */
-    hid_t     ftype_id = -1;          /* file data type ID */
-    hid_t     mtype_id = -1;          /* memory data type ID */
+    hid_t     grp_in = H5I_INVALID_HID;            /* read group ID */
+    hid_t     grp_out = H5I_INVALID_HID;           /* write group ID */
+    hid_t     dset_in = H5I_INVALID_HID;           /* read dataset ID */
+    hid_t     dset_out = H5I_INVALID_HID;          /* write dataset ID */
+    hid_t     type_in = H5I_INVALID_HID;           /* named type ID */
+    hid_t     dcpl_id = H5I_INVALID_HID;           /* dataset creation property list ID */
+    hid_t     space_id = H5I_INVALID_HID;          /* space ID */
+    hid_t     ftype_id = H5I_INVALID_HID;          /* file data type ID */
+    hid_t     mtype_id = H5I_INVALID_HID;          /* memory data type ID */
     size_t    msize;                  /* memory size of memory type */
     hsize_t   nelmts;                 /* number of elements in dataset */
     int       rank;                   /* rank of dataset */
@@ -145,7 +145,7 @@ int do_copy_refobjs(hid_t fidin,
                      *-------------------------------------------------------------------------
                      */
                     if(H5Tequal(mtype_id, H5T_STD_REF_OBJ)) {
-                        hid_t            refobj_id = -1;
+                        hid_t            refobj_id = H5I_INVALID_HID;
                         hobj_ref_t       *refbuf = NULL; /* buffer for object references */
                         hobj_ref_t       *buf = NULL;
                         const char*      refname;
@@ -221,7 +221,7 @@ int do_copy_refobjs(hid_t fidin,
                      *-------------------------------------------------------------------------
                      */
                     else if(H5Tequal(mtype_id, H5T_STD_REF_DSETREG)) {
-                        hid_t            refobj_id = -1;
+                        hid_t            refobj_id = H5I_INVALID_HID;
                         hdset_reg_ref_t  *refbuf = NULL; /* input buffer for region references */
                         hdset_reg_ref_t  *buf = NULL;    /* output buffer */
                         const char*      refname;
@@ -260,7 +260,7 @@ int do_copy_refobjs(hid_t fidin,
                                  * in the second traversal of the file
                                  */
                                 if((refname = MapIdToName(refobj_id, travt)) != NULL) {
-                                    hid_t region_id = -1;    /* region id of the referenced dataset */
+                                    hid_t region_id = H5I_INVALID_HID;    /* region id of the referenced dataset */
 
                                     if((region_id = H5Rget_region(dset_in, H5R_DATASET_REGION, &buf[u])) < 0)
                                         H5TOOLS_GOTO_ERROR((-1), "H5Rget_region failed");
@@ -430,16 +430,16 @@ static int copy_refs_attr(hid_t loc_in,
                           trav_table_t *travt,
                           hid_t fidout)         /* for saving references */
 {
-    hid_t       attr_id = -1;      /* attr ID */
-    hid_t       attr_out = -1;     /* attr ID */
-    hid_t       space_id = -1;     /* space ID */
-    hid_t       ftype_id = -1;     /* file data type ID */
-    hid_t       mtype_id = -1;     /* memory data type ID */
+    hid_t       attr_id = H5I_INVALID_HID;      /* attr ID */
+    hid_t       attr_out = H5I_INVALID_HID;     /* attr ID */
+    hid_t       space_id = H5I_INVALID_HID;     /* space ID */
+    hid_t       ftype_id = H5I_INVALID_HID;     /* file data type ID */
+    hid_t       mtype_id = H5I_INVALID_HID;     /* memory data type ID */
     size_t      msize;             /* memory size of type */
     hsize_t     nelmts;            /* number of elements in dataset */
     hsize_t     dims[H5S_MAX_RANK];/* dimensions of dataset */
     char        name[255];
-    H5O_info_t  oinfo;             /* Object info */
+    H5O_info2_t oinfo;             /* Object info */
     unsigned    u, i, j;
     int         rank;
     H5T_class_t type_class = -1;
@@ -454,7 +454,7 @@ static int copy_refs_attr(hid_t loc_in,
     int         ref_comp_field_n = 0;
     int         ret_value = 0;
 
-    if(H5Oget_info2(loc_in, &oinfo, H5O_INFO_NUM_ATTRS) < 0)
+    if(H5Oget_info3(loc_in, &oinfo, H5O_INFO_NUM_ATTRS) < 0)
         H5TOOLS_GOTO_ERROR((-1), "H5Oget_info failed");
 
     for(u = 0; u < (unsigned)oinfo.num_attrs; u++) {
@@ -796,16 +796,19 @@ MapIdToName(hid_t refobj_id, trav_table_t *travt)
         if(travt->objs[u].type == (h5trav_type_t)H5O_TYPE_DATASET ||
                 travt->objs[u].type == (h5trav_type_t)H5O_TYPE_GROUP ||
                 travt->objs[u].type == (h5trav_type_t)H5O_TYPE_NAMED_DATATYPE) {
-            H5O_info_t   ref_oinfo;     /* Stat for the refobj id */
+            H5O_info2_t ref_oinfo;     /* Stat for the refobj id */
+            int         token_cmp;
 
             /* obtain information to identify the referenced object uniquely */
-            if(H5Oget_info2(refobj_id, &ref_oinfo, H5O_INFO_BASIC) < 0)
+            if(H5Oget_info3(refobj_id, &ref_oinfo, H5O_INFO_BASIC) < 0)
                 goto out;
 
-            if(ref_oinfo.addr == travt->objs[u].objno) {
+            if(H5Otoken_cmp(refobj_id, &ref_oinfo.token, &travt->objs[u].obj_token, &token_cmp) < 0)
+                goto out;
+            if(!token_cmp) {
                 ret = travt->objs[u].name;
                 goto out;
-            } /* end if */
+            }
         }  /* end if */
     } /* u */
 
@@ -823,8 +826,8 @@ static herr_t update_ref_value(hid_t obj_id, H5R_type_t ref_type, void *ref_in,
         hid_t fid_out, void *ref_out, trav_table_t *travt)
 {
     const char *ref_obj_name;
-    hid_t       space_id = -1;
-    hid_t       ref_obj_id = -1;
+    hid_t       space_id = H5I_INVALID_HID;
+    hid_t       ref_obj_id = H5I_INVALID_HID;
     herr_t      ret_value = SUCCEED;
 
     ref_obj_id = H5Rdereference2(obj_id, H5P_DEFAULT, ref_type, ref_in);
diff --git a/tools/src/h5repack/h5repack_verify.c b/tools/src/h5repack/h5repack_verify.c
index d84766a..683988c 100644
--- a/tools/src/h5repack/h5repack_verify.c
+++ b/tools/src/h5repack/h5repack_verify.c
@@ -39,17 +39,17 @@ static int verify_filters(hid_t pid, hid_t tid, int nfilters, filter_info_t *fil
 int
 h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options)
 {
-    hid_t        fidin      = -1;   /* file ID for input file*/
-    hid_t        fidout     = -1;   /* file ID for output file*/
-    hid_t        did        = -1;   /* dataset ID */
-    hid_t        pid        = -1;   /* dataset creation property list ID */
-    hid_t        sid        = -1;   /* space ID */
-    hid_t        tid        = -1;   /* type ID */
+    hid_t        fidin      = H5I_INVALID_HID;   /* file ID for input file*/
+    hid_t        fidout     = H5I_INVALID_HID;   /* file ID for output file*/
+    hid_t        did        = H5I_INVALID_HID;   /* dataset ID */
+    hid_t        pid        = H5I_INVALID_HID;   /* dataset creation property list ID */
+    hid_t        sid        = H5I_INVALID_HID;   /* space ID */
+    hid_t        tid        = H5I_INVALID_HID;   /* type ID */
     int          ok         = 1;    /* step results */
     unsigned int i;
     trav_table_t *travt = NULL;
-    hid_t        fcpl_in     = -1;   /* file creation property for input file */
-    hid_t        fcpl_out    = -1;   /* file creation property for output file */
+    hid_t        fcpl_in     = H5I_INVALID_HID;   /* file creation property for input file */
+    hid_t        fcpl_out    = H5I_INVALID_HID;   /* file creation property for output file */
     H5F_fspace_strategy_t in_strategy, out_strategy;    /* file space handling strategy for in/output file */
     hbool_t      in_persist, out_persist;         /* free-space persist status for in/output file */
     hsize_t      in_threshold, out_threshold;     /* free-space section threshold for in/output file */
@@ -95,7 +95,7 @@ h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options
         * close
         *-------------------------------------------------------------------------
         */
-        if(H5Pclose(pid) < 0)
+        if (H5Pclose(pid) < 0)
             H5TOOLS_GOTO_ERROR((-1), "H5Pclose failed");
         if (H5Sclose(sid) < 0)
             H5TOOLS_GOTO_ERROR((-1), "H5Sclose failed");
@@ -114,7 +114,7 @@ h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options
         /* Initialize indexing options */
         h5trav_set_index(sort_by, sort_order);
         /* init table */
-        trav_table_init(&travt);
+        trav_table_init(fidout, &travt);
 
         /* get the list of objects in the file */
         if(h5trav_gettable(fidout, travt) < 0)
@@ -355,14 +355,14 @@ int verify_layout(hid_t pid, pack_info_t *obj)
 
 int h5repack_cmp_pl(const char *fname1, const char *fname2)
 {
-    hid_t         fid1 =-1;         /* file ID */
-    hid_t         fid2 =-1;         /* file ID */
-    hid_t         dset1 =-1;        /* dataset ID */
-    hid_t         dset2 =-1;        /* dataset ID */
-    hid_t         gid =-1;          /* group ID */
-    hid_t         dcpl1 =-1;        /* dataset creation property list ID */
-    hid_t         dcpl2 =-1;        /* dataset creation property list ID */
-    hid_t         gcplid =-1;       /* group creation property list */
+    hid_t         fid1 =H5I_INVALID_HID;         /* file ID */
+    hid_t         fid2 =H5I_INVALID_HID;         /* file ID */
+    hid_t         dset1 =H5I_INVALID_HID;        /* dataset ID */
+    hid_t         dset2 =H5I_INVALID_HID;        /* dataset ID */
+    hid_t         gid =H5I_INVALID_HID;          /* group ID */
+    hid_t         dcpl1 =H5I_INVALID_HID;        /* dataset creation property list ID */
+    hid_t         dcpl2 =H5I_INVALID_HID;        /* dataset creation property list ID */
+    hid_t         gcplid =H5I_INVALID_HID;       /* group creation property list */
     unsigned      crt_order_flag1;  /* group creation order flag */
     unsigned      crt_order_flag2;  /* group creation order flag */
     trav_table_t *trav = NULL;
@@ -386,7 +386,7 @@ int h5repack_cmp_pl(const char *fname1, const char *fname2)
     /* Initialize indexing options */
     h5trav_set_index(sort_by, sort_order);
     /* init table */
-    trav_table_init(&trav);
+    trav_table_init(fid1, &trav);
     if(h5trav_gettable(fid1, trav) < 0)
         H5TOOLS_GOTO_ERROR((-1), "h5trav_gettable failed");
 
diff --git a/tools/src/h5stat/h5stat.c b/tools/src/h5stat/h5stat.c
index 9ce7327..adc905a 100644
--- a/tools/src/h5stat/h5stat.c
+++ b/tools/src/h5stat/h5stat.c
@@ -379,13 +379,13 @@ ceil_log10(unsigned long x)
  *-------------------------------------------------------------------------
  */
 static herr_t
-attribute_stats(iter_t *iter, const H5O_info_t *oi)
+attribute_stats(iter_t *iter, const H5O_info2_t *oi, const H5O_native_info_t *native_oi)
 {
     unsigned     bin;               /* "bin" the number of objects falls in */
 
     /* Update dataset & attribute metadata info */
-    iter->attrs_btree_storage_size += oi->meta_size.attr.index_size;
-    iter->attrs_heap_storage_size += oi->meta_size.attr.heap_size;
+    iter->attrs_btree_storage_size += native_oi->meta_size.attr.index_size;
+    iter->attrs_heap_storage_size += native_oi->meta_size.attr.heap_size;
 
     /* Update small # of attribute count & limits */
     if(oi->num_attrs <= (hsize_t)sattrs_threshold)
@@ -440,7 +440,7 @@ attribute_stats(iter_t *iter, const H5O_info_t *oi)
  *-------------------------------------------------------------------------
  */
 static herr_t
-group_stats(iter_t *iter, const char *name, const H5O_info_t *oi)
+group_stats(iter_t *iter, const char *name, const H5O_info2_t *oi, const H5O_native_info_t *native_oi)
 {
     H5G_info_t ginfo;           /* Group information */
     unsigned bin;               /* "bin" the number of objects falls in */
@@ -450,8 +450,8 @@ group_stats(iter_t *iter, const char *name, const H5O_info_t *oi)
     iter->uniq_groups++;
 
     /* Get object header information */
-    iter->group_ohdr_info.total_size += oi->hdr.space.total;
-    iter->group_ohdr_info.free_size += oi->hdr.space.free;
+    iter->group_ohdr_info.total_size += native_oi->hdr.space.total;
+    iter->group_ohdr_info.free_size += native_oi->hdr.space.free;
 
     /* Get group information */
     if((ret_value = H5Gget_info_by_name(iter->fid, name, &ginfo, H5P_DEFAULT)) < 0)
@@ -484,11 +484,11 @@ group_stats(iter_t *iter, const char *name, const H5O_info_t *oi)
         (iter->group_bins[bin])++;
 
     /* Update group metadata info */
-    iter->groups_btree_storage_size += oi->meta_size.obj.index_size;
-    iter->groups_heap_storage_size += oi->meta_size.obj.heap_size;
+    iter->groups_btree_storage_size += native_oi->meta_size.obj.index_size;
+    iter->groups_heap_storage_size += native_oi->meta_size.obj.heap_size;
 
     /* Update attribute metadata info */
-    if((ret_value = attribute_stats(iter, oi)) < 0)
+    if((ret_value = attribute_stats(iter, oi, native_oi)) < 0)
         H5TOOLS_GOTO_ERROR(FAIL, "attribute_stats failed");
 
 done:
@@ -510,7 +510,7 @@ done:
  *-------------------------------------------------------------------------
  */
 static herr_t
-dataset_stats(iter_t *iter, const char *name, const H5O_info_t *oi)
+dataset_stats(iter_t *iter, const char *name, const H5O_info2_t *oi, const H5O_native_info_t *native_oi)
 {
     unsigned bin;               /* "bin" the number of objects falls in */
     hid_t did;                  /* Dataset ID */
@@ -533,18 +533,18 @@ dataset_stats(iter_t *iter, const char *name, const H5O_info_t *oi)
     iter->uniq_dsets++;
 
     /* Get object header information */
-    iter->dset_ohdr_info.total_size += oi->hdr.space.total;
-    iter->dset_ohdr_info.free_size += oi->hdr.space.free;
+    iter->dset_ohdr_info.total_size += native_oi->hdr.space.total;
+    iter->dset_ohdr_info.free_size += native_oi->hdr.space.free;
 
     if((did = H5Dopen2(iter->fid, name, H5P_DEFAULT)) < 0)
         H5TOOLS_GOTO_ERROR(FAIL, "H5Dopen() failed");
 
     /* Update dataset metadata info */
-    iter->datasets_index_storage_size += oi->meta_size.obj.index_size;
-    iter->datasets_heap_storage_size += oi->meta_size.obj.heap_size;
+    iter->datasets_index_storage_size += native_oi->meta_size.obj.index_size;
+    iter->datasets_heap_storage_size += native_oi->meta_size.obj.heap_size;
 
     /* Update attribute metadata info */
-    if((ret_value = attribute_stats(iter, oi)) < 0)
+    if((ret_value = attribute_stats(iter, oi, native_oi)) < 0)
         H5TOOLS_GOTO_ERROR(FAIL, "attribute_stats() failed");
 
     /* Get storage info */
@@ -702,7 +702,7 @@ done:
  *-------------------------------------------------------------------------
  */
 static herr_t
-datatype_stats(iter_t *iter, const H5O_info_t *oi)
+datatype_stats(iter_t *iter, const H5O_info2_t *oi, const H5O_native_info_t *native_oi)
 {
     herr_t ret_value = SUCCEED;
 
@@ -710,11 +710,11 @@ datatype_stats(iter_t *iter, const H5O_info_t *oi)
     iter->uniq_dtypes++;
 
     /* Get object header information */
-    iter->dtype_ohdr_info.total_size += oi->hdr.space.total;
-    iter->dtype_ohdr_info.free_size += oi->hdr.space.free;
+    iter->dtype_ohdr_info.total_size += native_oi->hdr.space.total;
+    iter->dtype_ohdr_info.free_size += native_oi->hdr.space.free;
 
     /* Update attribute metadata info */
-    if((ret_value = attribute_stats(iter, oi)) < 0)
+    if((ret_value = attribute_stats(iter, oi, native_oi)) < 0)
         H5TOOLS_GOTO_ERROR(FAIL, "attribute_stats() failed");
 done:
      return ret_value;
@@ -735,31 +735,36 @@ done:
  *-------------------------------------------------------------------------
  */
 static herr_t
-obj_stats(const char *path, const H5O_info_t *oi, const char *already_visited,
+obj_stats(const char *path, const H5O_info2_t *oi, const char *already_visited,
     void *_iter)
 {
+    H5O_native_info_t native_info;
     iter_t *iter = (iter_t *)_iter;
     herr_t ret_value = SUCCEED;
 
     /* If the object has already been seen then just return */
     if(NULL == already_visited) {
+        /* Retrieve the native info for the object */
+        if(H5Oget_native_info_by_name(iter->fid, path, &native_info, H5O_NATIVE_INFO_ALL, H5P_DEFAULT) < 0)
+            H5TOOLS_GOTO_ERROR(FAIL, "H5Oget_native_info_by_name failed");
+
         /* Gather some general statistics about the object */
         if(oi->rc > iter->max_links)
             iter->max_links = oi->rc;
 
         switch(oi->type) {
             case H5O_TYPE_GROUP:
-                if(group_stats(iter, path, oi) < 0)
+                if(group_stats(iter, path, oi, &native_info) < 0)
                     H5TOOLS_GOTO_ERROR(FAIL, "group_stats failed");
                 break;
 
             case H5O_TYPE_DATASET:
-                if(dataset_stats(iter, path, oi) < 0)
+                if(dataset_stats(iter, path, oi, &native_info) < 0)
                     H5TOOLS_GOTO_ERROR(FAIL, "dataset_stats failed");
                 break;
 
             case H5O_TYPE_NAMED_DATATYPE:
-                if(datatype_stats(iter, oi) < 0)
+                if(datatype_stats(iter, oi, &native_info) < 0)
                     H5TOOLS_GOTO_ERROR(FAIL, "datatype_stats failed");
                 break;
 
@@ -792,7 +797,7 @@ done:
  *-------------------------------------------------------------------------
  */
 static herr_t
-lnk_stats(const char H5_ATTR_UNUSED *path, const H5L_info_t *li, void *_iter)
+lnk_stats(const char H5_ATTR_UNUSED *path, const H5L_info2_t *li, void *_iter)
 {
     iter_t *iter = (iter_t *)_iter;
 
@@ -1853,7 +1858,7 @@ main(int argc, const char *argv[])
 {
     iter_t              iter;
     const char         *fname = NULL;
-    hid_t               fid = -1;
+    hid_t               fid = H5I_INVALID_HID;
     H5E_auto2_t         func;
     H5E_auto2_t         tools_func;
     void               *edata;
diff --git a/tools/src/misc/h5clear.c b/tools/src/misc/h5clear.c
index ae57031..927167b 100644
--- a/tools/src/misc/h5clear.c
+++ b/tools/src/misc/h5clear.c
@@ -252,8 +252,8 @@ int
 main (int argc, const char *argv[])
 {
     char *fname = NULL;             /* File name */
-    hid_t fapl = -1;                /* File access property list */
-    hid_t fid = -1;                 /* File ID */
+    hid_t fapl = H5I_INVALID_HID;                /* File access property list */
+    hid_t fid = H5I_INVALID_HID;                 /* File ID */
     haddr_t image_addr;
     hsize_t image_len;
     unsigned flags = H5F_ACC_RDWR;    /* file access flags */