Add HD prefix to tests

12 files changed, 770 insertions, 745 deletions

diff --git a/tools/src/h5copy/h5copy.c b/tools/src/h5copy/h5copy.c
index 1800810..9490cd9 100644
--- a/tools/src/h5copy/h5copy.c
+++ b/tools/src/h5copy/h5copy.c
@@ -381,10 +381,10 @@ main (int argc, const char *argv[])
     *-------------------------------------------------------------------------*/
 
     if (verbose) {
-        printf("Copying file <%s> and object <%s> to file <%s> and object <%s>\n",
+        HDprintf("Copying file <%s> and object <%s> to file <%s> and object <%s>\n",
         fname_src, oname_src, fname_dst, oname_dst);
         if (flag) {
-            printf("Using %s flag\n", str_flag);
+            HDprintf("Using %s flag\n", str_flag);
         }
     }
 
@@ -419,7 +419,7 @@ main (int argc, const char *argv[])
 
         /* Display some output if requested */
         if(verbose)
-            printf("%s: Creating parent groups\n", h5tools_getprogname());
+            HDprintf("%s: Creating parent groups\n", h5tools_getprogname());
     } /* end if */
     else {
         /* error, if parent groups doesn't already exist in destination file */
@@ -490,7 +490,7 @@ main (int argc, const char *argv[])
     leave(EXIT_SUCCESS);
 
 done:
-    printf("Error in copy...Exiting\n");
+    HDprintf("Error in copy...Exiting\n");
 
     /* free link info path */
     if (linkinfo.trg_path)
diff --git a/tools/src/h5diff/h5diff_common.c b/tools/src/h5diff/h5diff_common.c
index 0c1521e..362e3f2 100644
--- a/tools/src/h5diff/h5diff_common.c
+++ b/tools/src/h5diff/h5diff_common.c
@@ -62,9 +62,9 @@ static void check_options(diff_opt_t* opts)
      * These options are mutually exclusive.
      */
     if ((opts->d + opts->p + opts->use_system_epsilon) > 1) {
-        printf("%s error: -d, -p and --use-system-epsilon options are mutually-exclusive;\n", PROGRAMNAME);
-        printf("use no more than one.\n");
-        printf("Try '-h' or '--help' option for more information or see the %s entry in the 'HDF5 Reference Manual'.\n", PROGRAMNAME);
+        HDprintf("%s error: -d, -p and --use-system-epsilon options are mutually-exclusive;\n", PROGRAMNAME);
+        HDprintf("use no more than one.\n");
+        HDprintf("Try '-h' or '--help' option for more information or see the %s entry in the 'HDF5 Reference Manual'.\n", PROGRAMNAME);
         h5diff_exit(EXIT_FAILURE);
     }
 }
@@ -186,7 +186,7 @@ void parse_command_line(int argc,
 
             /* create linked list of excluding objects */
             if( (exclude_node = (struct exclude_path_list*) HDmalloc(sizeof(struct exclude_path_list))) == NULL) {
-                printf("Error: lack of memory!\n");
+                HDprintf("Error: lack of memory!\n");
                 h5diff_exit(EXIT_FAILURE);
             }
 
@@ -212,7 +212,7 @@ void parse_command_line(int argc,
             opts->d=1;
 
             if (check_d_input(opt_arg) == - 1) {
-                printf("<-d %s> is not a valid option\n", opt_arg);
+                HDprintf("<-d %s> is not a valid option\n", opt_arg);
                 usage();
                 h5diff_exit(EXIT_FAILURE);
             }
@@ -226,7 +226,7 @@ void parse_command_line(int argc,
         case 'p':
             opts->p=1;
             if (check_p_input(opt_arg) == -1) {
-                printf("<-p %s> is not a valid option\n", opt_arg);
+                HDprintf("<-p %s> is not a valid option\n", opt_arg);
                 usage();
                 h5diff_exit(EXIT_FAILURE);
             }
@@ -240,7 +240,7 @@ void parse_command_line(int argc,
         case 'n':
             opts->n=1;
             if ( check_n_input(opt_arg) == -1) {
-                printf("<-n %s> is not a valid option\n", opt_arg);
+                HDprintf("<-n %s> is not a valid option\n", opt_arg);
                 usage();
                 h5diff_exit(EXIT_FAILURE);
             }
@@ -309,20 +309,20 @@ void parse_command_line(int argc,
          return;
 
      if (opts->cmn_objs == 0) {
-         printf("No common objects found. Files are not comparable.\n");
+         HDprintf("No common objects found. Files are not comparable.\n");
          if (!opts->m_verbose)
-             printf("Use -v for a list of objects.\n");
+             HDprintf("Use -v for a list of objects.\n");
      }
 
      if (opts->not_cmp == 1) {
          if (opts->m_list_not_cmp == 0) {
-             printf("--------------------------------\n");
-             printf("Some objects are not comparable\n");
-             printf("--------------------------------\n");
+             HDprintf("--------------------------------\n");
+             HDprintf("Some objects are not comparable\n");
+             HDprintf("--------------------------------\n");
              if (opts->m_verbose)
-                 printf("Use -c for a list of objects without details of differences.\n");
+                 HDprintf("Use -c for a list of objects without details of differences.\n");
              else
-                 printf("Use -c for a list of objects.\n");
+                 HDprintf("Use -c for a list of objects.\n");
          }
      }
  }
diff --git a/tools/src/h5diff/ph5diff_main.c b/tools/src/h5diff/ph5diff_main.c
index 83240cb..380ab3b 100644
--- a/tools/src/h5diff/ph5diff_main.c
+++ b/tools/src/h5diff/ph5diff_main.c
@@ -68,7 +68,7 @@ int main(int argc, const char *argv[])
 
     if(g_nTasks == 1)
     {
-        printf("Only 1 task available...doing serial diff\n");
+        HDprintf("Only 1 task available...doing serial diff\n");
 
         g_Parallel = 0;
 
@@ -148,12 +148,12 @@ ph5diff_worker(int nID)
                 /* Open the files */
                 if ((file1_id = H5Fopen (filenames[0], H5F_ACC_RDONLY, H5P_DEFAULT)) < 0)
                 {
-                    printf ("h5diff Task [%d]: <%s>: unable to open file\n", nID, filenames[0]);
+                    HDprintf("h5diff Task [%d]: <%s>: unable to open file\n", nID, filenames[0]);
                     MPI_Abort(MPI_COMM_WORLD, 0);
                 }
                 if ((file2_id = H5Fopen (filenames[1], H5F_ACC_RDONLY, H5P_DEFAULT)) < 0)
                 {
-                    printf ("h5diff Task [%d]: <%s>: unable to open file\n", nID, filenames[1]);
+                    HDprintf("h5diff Task [%d]: <%s>: unable to open file\n", nID, filenames[1]);
                     MPI_Abort(MPI_COMM_WORLD, 0);
                 }
                 /* enable error reporting */
@@ -170,7 +170,7 @@ ph5diff_worker(int nID)
             /* Make certain we've received the filenames and opened the files already */
             if(file1_id < 0 || file2_id < 0)
             {
-                printf("ph5diff_worker: ERROR: work received before/without filenames\n");
+                HDprintf("ph5diff_worker: ERROR: work received before/without filenames\n");
                 break;
             }
 
@@ -199,7 +199,7 @@ ph5diff_worker(int nID)
                     char out_data[PRINT_DATA_MAX_SIZE];
                     int tmp;
 
-                    memset(out_data, 0, PRINT_DATA_MAX_SIZE);
+                    HDmemset(out_data, 0, PRINT_DATA_MAX_SIZE);
                     i=0;
 
                     rewind(overflow_file);
@@ -210,7 +210,7 @@ ph5diff_worker(int nID)
                         {
                             MPI_Send(out_data, PRINT_DATA_MAX_SIZE, MPI_BYTE, 0, MPI_TAG_PRINT_DATA, MPI_COMM_WORLD);
                             i=0;
-                            memset(out_data, 0, PRINT_DATA_MAX_SIZE);
+                            HDmemset(out_data, 0, PRINT_DATA_MAX_SIZE);
                         }
                     }
 
@@ -221,8 +221,8 @@ ph5diff_worker(int nID)
                     overflow_file = NULL;
                 }
 
-                fflush(stdout);
-                memset(outBuff, 0, OUTBUFF_SIZE);
+                HDfflush(stdout);
+                HDmemset(outBuff, 0, OUTBUFF_SIZE);
                 outBuffOffset = 0;
 
                 MPI_Send(&diffs, sizeof(diffs), MPI_BYTE, 0, MPI_TAG_TOK_RETURN, MPI_COMM_WORLD);
@@ -238,7 +238,7 @@ ph5diff_worker(int nID)
         }
         else
         {
-            printf("ph5diff_worker: ERROR: invalid tag (%d) received\n", Status.MPI_TAG);
+            HDprintf("ph5diff_worker: ERROR: invalid tag (%d) received\n", Status.MPI_TAG);
             break;
         }
 
@@ -266,14 +266,14 @@ void print_manager_output(void)
     /* If there was something we buffered, let's print it now */
     if( (outBuffOffset>0) && g_Parallel)
     {
-        printf("%s", outBuff);
+        HDprintf("%s", outBuff);
 
         if(overflow_file)
         {
             int     tmp;
             rewind(overflow_file);
-            while((tmp = getc(overflow_file)) >= 0)
-                putchar(tmp);
+            while((tmp = HDgetc(overflow_file)) >= 0)
+                HDputchar(tmp);
             fclose(overflow_file);
             overflow_file = NULL;
         }
@@ -321,6 +321,6 @@ void h5diff_exit(int status)
     /* Always exit(0), since MPI implementations do weird stuff when they
      *  receive a non-zero exit value. - QAK
      */
-    exit(0);
+    HDexit(0);
 }
 
diff --git a/tools/src/h5dump/h5dump_ddl.c b/tools/src/h5dump/h5dump_ddl.c
index 821d2c7..e66a1c5 100644
--- a/tools/src/h5dump/h5dump_ddl.c
+++ b/tools/src/h5dump/h5dump_ddl.c
@@ -865,7 +865,7 @@ dump_group(hid_t gid, const char *name)
             if(!type_table->objs[u].recorded) {
                 dset = H5Dopen2(gid, type_table->objs[u].objname, H5P_DEFAULT);
                 type = H5Dget_type(dset);
-                sprintf(type_name, "#"H5_PRINTF_HADDR_FMT, type_table->objs[u].objno);
+                HDsprintf(type_name, "#"H5_PRINTF_HADDR_FMT, type_table->objs[u].objno);
                 dump_function_table->dump_named_datatype_function(type, type_name);
                 H5Tclose(type);
                 H5Dclose(dset);
@@ -2024,7 +2024,7 @@ handle_datatypes(hid_t fid, const char *type, void H5_ATTR_UNUSED * data, int pe
 
             if(!type_table->objs[idx].recorded) {
                 /* unamed datatype */
-                sprintf(name, "/#"H5_PRINTF_HADDR_FMT, type_table->objs[idx].objno);
+                HDsprintf(name, "/#"H5_PRINTF_HADDR_FMT, type_table->objs[idx].objno);
 
                 if(!HDstrcmp(name, real_name))
                     break;
diff --git a/tools/src/h5dump/h5dump_xml.c b/tools/src/h5dump/h5dump_xml.c
index fc56433..c4fd948 100644
--- a/tools/src/h5dump/h5dump_xml.c
+++ b/tools/src/h5dump/h5dump_xml.c
@@ -588,7 +588,7 @@ xml_name_to_XID(const char *str , char *outstr, int outlen, int gen)
             if (objno == HADDR_UNDEF) {
                 if (gen) {
                     objno = ref_path_table_gen_fake(str);
-                    sprintf(outstr, "xid_"H5_PRINTF_HADDR_FMT, objno);
+                    HDsprintf(outstr, "xid_"H5_PRINTF_HADDR_FMT, objno);
                     return 0;
                 }
                 else {
@@ -599,7 +599,7 @@ xml_name_to_XID(const char *str , char *outstr, int outlen, int gen)
         else {
             if (gen) {
                 objno = ref_path_table_gen_fake(str);
-                sprintf(outstr, "xid_"H5_PRINTF_HADDR_FMT, objno);
+                HDsprintf(outstr, "xid_"H5_PRINTF_HADDR_FMT, objno);
                 return 0;
             }
             else {
@@ -608,7 +608,7 @@ xml_name_to_XID(const char *str , char *outstr, int outlen, int gen)
         }
     }
 
-    sprintf(outstr, "xid_"H5_PRINTF_HADDR_FMT, objno);
+    HDsprintf(outstr, "xid_"H5_PRINTF_HADDR_FMT, objno);
 
     return(0);
 }
@@ -2686,7 +2686,7 @@ xml_dump_group(hid_t gid, const char *name)
                         if(!type_table->objs[u].recorded) {
                             dset = H5Dopen2(gid, type_table->objs[u].objname, H5P_DEFAULT);
                             type = H5Dget_type(dset);
-                            sprintf(type_name, "#"H5_PRINTF_HADDR_FMT, type_table->objs[u].objno);
+                            HDsprintf(type_name, "#"H5_PRINTF_HADDR_FMT, type_table->objs[u].objno);
                             dump_function_table->dump_named_datatype_function(type, type_name);
                             H5Tclose(type);
                             H5Dclose(dset);
@@ -2768,7 +2768,7 @@ xml_dump_group(hid_t gid, const char *name)
                 if(!type_table->objs[u].recorded) {
                     dset = H5Dopen2(gid, type_table->objs[u].objname, H5P_DEFAULT);
                     type = H5Dget_type(dset);
-                    sprintf(type_name, "#"H5_PRINTF_HADDR_FMT, type_table->objs[u].objno);
+                    HDsprintf(type_name, "#"H5_PRINTF_HADDR_FMT, type_table->objs[u].objno);
                     dump_function_table->dump_named_datatype_function(type, type_name);
                     H5Tclose(type);
                     H5Dclose(dset);
diff --git a/tools/src/h5repack/h5repack.c b/tools/src/h5repack/h5repack.c
index e96dea5..c18df6c 100644
--- a/tools/src/h5repack/h5repack.c
+++ b/tools/src/h5repack/h5repack.c
@@ -483,7 +483,7 @@ copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p,
         } /*H5T_REFERENCE*/
 
         if (options->verbose)
-            printf(FORMAT_OBJ_ATTR, "attr", name);
+            HDprintf(FORMAT_OBJ_ATTR, "attr", name);
 
         /*-------------------------------------------------------------------------
          * close
@@ -545,7 +545,7 @@ static int check_options(pack_opt_t *options) {
     */
     if (options->verbose && have_request(options) /* only print if requested */) {
         if (options->all_layout == 1) {
-            printf("All objects to modify layout are...\n");
+            HDprintf("All objects to modify layout are...\n");
             switch (options->layout_g) {
             case H5D_COMPACT:
                 strcpy(slayout, "compact");
@@ -566,17 +566,17 @@ static int check_options(pack_opt_t *options) {
                 strcpy(slayout, "invalid layout\n");
                 HGOTO_DONE(FAIL);
             }
-            printf(" Apply %s layout to all", slayout);
+            HDprintf(" Apply %s layout to all", slayout);
             if (H5D_CHUNKED == options->layout_g) {
-                printf("with dimension [ ");
+                HDprintf("with dimension [ ");
                 for (j = 0; j < options->chunk_g.rank; j++)
-                    printf("%d ", (int) options->chunk_g.chunk_lengths[j]);
-                printf("]");
+                    HDprintf("%d ", (int) options->chunk_g.chunk_lengths[j]);
+                HDprintf("]");
             }
-            printf("\n");
+            HDprintf("\n");
         }
         else
-            printf("No all objects to modify layout\n");
+            HDprintf("No all objects to modify layout\n");
     }/* verbose */
 
     for (i = 0; i < options->op_tbl->nelems; i++) {
@@ -584,16 +584,16 @@ static int check_options(pack_opt_t *options) {
 
         if (options->op_tbl->objs[i].chunk.rank > 0) {
             if (options->verbose) {
-                printf(" <%s> with chunk size ", name);
+                HDprintf(" <%s> with chunk size ", name);
                 for (k = 0; k < options->op_tbl->objs[i].chunk.rank; k++)
-                    printf("%d ", (int) options->op_tbl->objs[i].chunk.chunk_lengths[k]);
-                printf("\n");
+                    HDprintf("%d ", (int) options->op_tbl->objs[i].chunk.chunk_lengths[k]);
+                HDprintf("\n");
             }
             has_ck = 1;
         }
         else if (options->op_tbl->objs[i].chunk.rank == -2) {
             if (options->verbose)
-                printf(" <%s> %s\n", name, "NONE (contiguous)");
+                HDprintf(" <%s> %s\n", name, "NONE (contiguous)");
             has_ck = 1;
         }
     }
@@ -608,33 +608,33 @@ static int check_options(pack_opt_t *options) {
 
     if (options->verbose && have_request(options) /* only print if requested */) {
         if (options->all_filter == 1) {
-            printf("All objects to apply filter are...\n");
+            HDprintf("All objects to apply filter are...\n");
             for (k = 0; k < options->n_filter_g; k++) {
                 H5Z_filter_t filtn = options->filter_g[k].filtn;
                 if (filtn < 0) {
-                    printf(" Unknown\n");
+                    HDprintf(" Unknown\n");
                     continue;
                 }
                 switch (filtn) {
                 case H5Z_FILTER_NONE:
-                    printf(" Uncompress all\n");
+                    HDprintf(" Uncompress all\n");
                     break;
                 case H5Z_FILTER_SHUFFLE:
                 case H5Z_FILTER_FLETCHER32:
-                    printf(" All with %s\n", get_sfilter(filtn));
+                    HDprintf(" All with %s\n", get_sfilter(filtn));
                     break;
                 case H5Z_FILTER_SZIP:
                 case H5Z_FILTER_DEFLATE:
-                    printf(" All with %s, parameter %d\n", get_sfilter(filtn), options->filter_g[k].cd_values[0]);
+                    HDprintf(" All with %s, parameter %d\n", get_sfilter(filtn), options->filter_g[k].cd_values[0]);
                     break;
                 default:
-                    printf(" User Defined %d\n", filtn);
+                    HDprintf(" User Defined %d\n", filtn);
                     break;
                 } /* k */
             };
         }
         else
-            printf("No all objects to apply filter\n");
+            HDprintf("No all objects to apply filter\n");
     } /* verbose */
 
     for (i = 0; i < options->op_tbl->nelems; i++) {
@@ -645,9 +645,9 @@ static int check_options(pack_opt_t *options) {
             if (options->verbose) {
                 if(pack.filter[j].filtn >= 0) {
                     if(pack.filter[j].filtn > H5Z_FILTER_SCALEOFFSET)
-                        printf(" <%s> with %s filter %d\n", name, get_sfilter(pack.filter[j].filtn), pack.filter[j].filtn);
+                        HDprintf(" <%s> with %s filter %d\n", name, get_sfilter(pack.filter[j].filtn), pack.filter[j].filtn);
                     else
-                        printf(" <%s> with %s filter\n", name, get_sfilter(pack.filter[j].filtn));
+                        HDprintf(" <%s> with %s filter\n", name, get_sfilter(pack.filter[j].filtn));
                 }
             }
             has_cp = 1;
@@ -678,7 +678,7 @@ static int check_options(pack_opt_t *options) {
     */
     if (options->ublock_filename != NULL && options->ublock_size == 0) {
         if (options->verbose) {
-            printf("Warning: user block size missing for file %s. Assigning a default size of 1024...\n", options->ublock_filename);
+            HDprintf("Warning: user block size missing for file %s. Assigning a default size of 1024...\n", options->ublock_filename);
             options->ublock_size = 1024;
         }
     }
@@ -747,19 +747,19 @@ static int check_objects(const char* fname, pack_opt_t *options) {
      */
 
     if (options->verbose)
-        printf("Opening file. Searching %zu objects to modify ...\n", travt->nobjs);
+        HDprintf("Opening file. Searching %zu objects to modify ...\n", travt->nobjs);
 
     for (i = 0; i < options->op_tbl->nelems; i++) {
         char* name = options->op_tbl->objs[i].path;
         if (options->verbose)
-            printf(" <%s>", name);
+            HDprintf(" <%s>", name);
 
         /* the input object names are present in the file and are valid */
         if (h5trav_getindext(name, travt) < 0)
             HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "%s Could not find <%s> in file <%s>. Exiting...\n",
                     (options->verbose ? "\n" : ""), name, fname);
         if (options->verbose)
-            printf("...Found\n");
+            HDprintf("...Found\n");
 
         for (ifil = 0; ifil < options->op_tbl->objs[i].nfilters; ifil++) {
             if (options->op_tbl->objs[i].filter[ifil].filtn < 0)
@@ -799,7 +799,7 @@ static int check_objects(const char* fname, pack_opt_t *options) {
                     }
 
                     if (csize < ppb) {
-                        printf(" <warning: SZIP settings, chunk size is smaller than pixels per block>\n");
+                        HDprintf(" <warning: SZIP settings, chunk size is smaller than pixels per block>\n");
                         HGOTO_DONE(0);
                     }
                 }
diff --git a/tools/src/h5repack/h5repack_copy.c b/tools/src/h5repack/h5repack_copy.c
index 8122d6d..13adb7c 100644
--- a/tools/src/h5repack/h5repack_copy.c
+++ b/tools/src/h5repack/h5repack_copy.c
@@ -296,7 +296,7 @@ print_user_block(fnamein, fidin);
      *-------------------------------------------------------------------------
      */
     if (options->verbose)
-        printf("Making new file ...\n");
+        HDprintf("Making new file ...\n");
 
     if ((fidout = H5Fcreate(fnameout, H5F_ACC_TRUNC, fcpl, fapl)) < 0)
         HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Fcreate could not create file <%s>:", fnameout);
@@ -624,9 +624,9 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
      */
 
     if (options->verbose) {
-        printf("-----------------------------------------\n");
-        printf(" Type     Filter (Compression)     Name\n");
-        printf("-----------------------------------------\n");
+        HDprintf("-----------------------------------------\n");
+        HDprintf(" Type     Filter (Compression)     Name\n");
+        HDprintf("-----------------------------------------\n");
     }
 
     if (travt->objs) {
@@ -645,7 +645,7 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
                  */
             case H5TRAV_TYPE_GROUP:
                 if (options->verbose)
-                    printf(FORMAT_OBJ, "group", travt->objs[i].name);
+                    HDprintf(FORMAT_OBJ, "group", travt->objs[i].name);
 
                 /* open input group */
                 if ((grp_in = H5Gopen2(fidin, travt->objs[i].name, H5P_DEFAULT)) < 0)
@@ -880,7 +880,7 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
                             if (dset_out == FAIL) {
                                 H5Epush2(H5tools_ERR_STACK_g, __FILE__, FUNC, __LINE__, H5tools_ERR_CLS_g, H5E_tools_g, H5E_tools_min_id_g, "H5Dcreate2 failed");
                                 if (options->verbose)
-                                    printf(" warning: could not create dataset <%s>. Applying original settings\n", travt->objs[i].name);
+                                    HDprintf(" warning: could not create dataset <%s>. Applying original settings\n", travt->objs[i].name);
 
                                 if ((dset_out = H5Dcreate2(fidout, travt->objs[i].name, wtype_id, f_space_id, H5P_DEFAULT, dcpl_in, H5P_DEFAULT)) < 0)
                                     HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dcreate2 failed");
@@ -1043,10 +1043,10 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
                                  (in case there was a filter)
                                  */
                                 if (has_filter && apply_s == 0)
-                                    printf(" <warning: filter not applied to %s. dataset smaller than %d bytes>\n", travt->objs[i].name, (int) options->min_comp);
+                                    HDprintf(" <warning: filter not applied to %s. dataset smaller than %d bytes>\n", travt->objs[i].name, (int) options->min_comp);
 
                                 if (has_filter && apply_f == 0)
-                                    printf(" <warning: could not apply the filter to %s>\n", travt->objs[i].name);
+                                    HDprintf(" <warning: could not apply the filter to %s>\n", travt->objs[i].name);
                             } /* verbose */
 
                             /*-------------------------------------------------------------------------
@@ -1127,7 +1127,7 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
                         HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dclose failed");
 
                     if (options->verbose)
-                        printf(FORMAT_OBJ, "dset", travt->objs[i].name);
+                        HDprintf(FORMAT_OBJ, "dset", travt->objs[i].name);
 
                 } /* end do we have request for filter/chunking */
                 break;
@@ -1138,7 +1138,7 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
              */
             case H5TRAV_TYPE_NAMED_DATATYPE:
                 if (options->verbose)
-                    printf(FORMAT_OBJ, "type", travt->objs[i].name);
+                    HDprintf(FORMAT_OBJ, "type", travt->objs[i].name);
 
                 if ((type_in = H5Topen2(fidin, travt->objs[i].name, H5P_DEFAULT)) < 0)
                     HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Topen2 failed");
@@ -1177,13 +1177,13 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
             case H5TRAV_TYPE_LINK:
             case H5TRAV_TYPE_UDLINK:
                 if (options->verbose)
-                    printf(FORMAT_OBJ, "link", travt->objs[i].name);
+                    HDprintf(FORMAT_OBJ, "link", travt->objs[i].name);
 
                 if (H5Lcopy(fidin, travt->objs[i].name, fidout, travt->objs[i].name, H5P_DEFAULT, H5P_DEFAULT) < 0)
                     HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Lcopy failed");
 
                 if (options->verbose)
-                    printf(FORMAT_OBJ, "link", travt->objs[i].name);
+                    HDprintf(FORMAT_OBJ, "link", travt->objs[i].name);
                 break;
 
             default:
@@ -1278,7 +1278,7 @@ print_dataset_info(hid_t dcpl_id, char *objname, double ratio, int pr)
                 {
                     unsigned level = cd_values[0];
 
-                    sprintf(temp,"(%d)", level);
+                    HDsprintf(temp,"(%d)", level);
                     HDstrcat(strfilter, temp);
                 }
 #endif
@@ -1292,7 +1292,7 @@ print_dataset_info(hid_t dcpl_id, char *objname, double ratio, int pr)
                     unsigned options_mask = cd_values[0]; /* from dcpl, not filt*/
                     unsigned ppb = cd_values[1];
 
-                    sprintf(temp,"(%d,", ppb);
+                    HDsprintf(temp,"(%d,", ppb);
                     HDstrcat(strfilter, temp);
                     if (options_mask & H5_SZIP_EC_OPTION_MASK)
                         HDstrcpy(temp, "EC) ");
@@ -1326,15 +1326,15 @@ print_dataset_info(hid_t dcpl_id, char *objname, double ratio, int pr)
     }/*i*/
 
     if (!pr)
-        printf(FORMAT_OBJ, "dset", objname);
+        HDprintf(FORMAT_OBJ, "dset", objname);
     else {
         char str[512], temp[512];
 
         HDstrcpy(str, "dset     ");
         HDstrcat(str, strfilter);
-        sprintf(temp, "  (%.3f:1)", ratio);
+        HDsprintf(temp, "  (%.3f:1)", ratio);
         HDstrcat(str, temp);
-        printf(FORMAT_OBJ, str, objname);
+        HDprintf(FORMAT_OBJ, str, objname);
     }
 }
 
@@ -1461,10 +1461,10 @@ print_user_block(const char *filename, hid_t fid)
 
         for (i = 0; i < nread; i++) {
 
-            printf("%c ", rbuf[i]);
+            HDprintf("%c ", rbuf[i]);
 
         }
-        printf("\n");
+        HDprintf("\n");
 
         if (nread < 0) {
             HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "nread < 0");
diff --git a/tools/src/h5repack/h5repack_refs.c b/tools/src/h5repack/h5repack_refs.c
index f5846ba..7e8951f 100644
--- a/tools/src/h5repack/h5repack_refs.c
+++ b/tools/src/h5repack/h5repack_refs.c
@@ -158,7 +158,7 @@ int do_copy_refobjs(hid_t fidin,
                         if(nelmts) {
                             buf = (hobj_ref_t *)HDmalloc((unsigned)(nelmts * msize));
                             if(buf==NULL) {
-                                printf("cannot read into memory\n" );
+                                HDprintf("cannot read into memory\n" );
                                 HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDmalloc failed");
                             } /* end if */
                             if(H5Dread(dset_in, mtype_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0)
@@ -166,7 +166,7 @@ int do_copy_refobjs(hid_t fidin,
 
                             refbuf = (hobj_ref_t*) HDcalloc((unsigned)nelmts, msize);
                             if(refbuf == NULL){
-                                printf("cannot allocate memory\n" );
+                                HDprintf("cannot allocate memory\n" );
                                 HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDcalloc failed");
                             } /* end if */
                             for(u = 0; u < nelmts; u++) {
@@ -183,8 +183,8 @@ int do_copy_refobjs(hid_t fidin,
                                     if(H5Rcreate(&refbuf[u], fidout, refname, H5R_OBJECT, (hid_t)-1) < 0)
                                         HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Rcreate failed");
                                     if(options->verbose) {
-                                        printf(FORMAT_OBJ,"dset",travt->objs[i].name );
-                                        printf("object <%s> object reference created to <%s>\n",
+                                        HDprintf(FORMAT_OBJ,"dset",travt->objs[i].name );
+                                        HDprintf("object <%s> object reference created to <%s>\n",
                                             travt->objs[i].name,
                                             refname);
                                     }
@@ -234,7 +234,7 @@ int do_copy_refobjs(hid_t fidin,
                         if(nelmts) {
                             buf = (hdset_reg_ref_t *)HDmalloc((unsigned)(nelmts * msize));
                             if(buf == NULL) {
-                                printf("cannot read into memory\n");
+                                HDprintf("cannot read into memory\n");
                                 HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDmalloc failed");
                             } /* end if */
                             if(H5Dread(dset_in, mtype_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0)
@@ -246,7 +246,7 @@ int do_copy_refobjs(hid_t fidin,
                              */
                             refbuf = (hdset_reg_ref_t *)HDcalloc(sizeof(hdset_reg_ref_t), (size_t)nelmts); /*init to zero */
                             if(refbuf == NULL) {
-                                printf("cannot allocate memory\n");
+                                HDprintf("cannot allocate memory\n");
                                 HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDcalloc failed");
                             } /* end if */
 
@@ -271,8 +271,8 @@ int do_copy_refobjs(hid_t fidin,
                                     if(H5Sclose(region_id) < 0)
                                         HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sclose failed");
                                     if(options->verbose) {
-                                        printf(FORMAT_OBJ,"dset",travt->objs[i].name );
-                                        printf("object <%s> region reference created to <%s>\n",
+                                        HDprintf(FORMAT_OBJ,"dset",travt->objs[i].name );
+                                        HDprintf("object <%s> region reference created to <%s>\n",
                                             travt->objs[i].name,
                                             refname);
                                     }
@@ -590,7 +590,7 @@ static int copy_refs_attr(hid_t loc_in,
             if((is_ref || is_ref_array) && (H5R_OBJ_REF_BUF_SIZE==msize)) {
                 buf = (hobj_ref_t *)HDmalloc((unsigned)(nelmts * msize));
                 if(buf == NULL) {
-                    printf("cannot read into memory\n");
+                    HDprintf("cannot read into memory\n");
                     HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDmalloc failed");
                 } /* end if */
                 if(H5Aread(attr_id, mtype_id, buf) < 0)
@@ -598,7 +598,7 @@ static int copy_refs_attr(hid_t loc_in,
 
                 refbuf = (hobj_ref_t *)HDcalloc((unsigned)nelmts, msize);
                 if(refbuf == NULL) {
-                    printf("cannot allocate memory\n");
+                    HDprintf("cannot allocate memory\n");
                     HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDcalloc failed");
                 } /* end if */
 
@@ -611,7 +611,7 @@ static int copy_refs_attr(hid_t loc_in,
                 buf = (hdset_reg_ref_t *)HDmalloc((unsigned)(nelmts * msize));
 
                 if(buf == NULL) {
-                    printf( "cannot read into memory\n" );
+                    HDprintf( "cannot read into memory\n" );
                     HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDmalloc failed");
                 } /* end if */
                 if(H5Aread(attr_id, mtype_id, buf) < 0)
@@ -623,7 +623,7 @@ static int copy_refs_attr(hid_t loc_in,
                  */
                 refbuf = (hdset_reg_ref_t *)HDcalloc(sizeof(hdset_reg_ref_t), (size_t)nelmts); /*init to zero */
                 if(refbuf == NULL) {
-                    printf( "cannot allocate memory\n" );
+                    HDprintf( "cannot allocate memory\n" );
                     HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDcalloc failed");
                 } /* end if */
 
@@ -638,7 +638,7 @@ static int copy_refs_attr(hid_t loc_in,
                 refbuf = buf; /* reuse the read buffer for write */
 
                 if(buf == NULL) {
-                    printf( "cannot read into memory\n" );
+                    HDprintf( "cannot read into memory\n" );
                     HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDmalloc failed");
                 } /* end if */
 
@@ -679,7 +679,7 @@ static int copy_refs_attr(hid_t loc_in,
                 refbuf = buf; /* reuse the read buffer for write */
 
                 if(buf == NULL) {
-                    printf( "cannot read into memory\n" );
+                    HDprintf( "cannot read into memory\n" );
                     HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDmalloc failed");
                 } /* end if */
 
diff --git a/tools/src/h5stat/h5stat.c b/tools/src/h5stat/h5stat.c
index 75d325a..9528d2c 100644
--- a/tools/src/h5stat/h5stat.c
+++ b/tools/src/h5stat/h5stat.c
@@ -396,12 +396,12 @@ attribute_stats(iter_t *iter, const H5O_info_t *oi)
     /* Add attribute count to proper bin */
     bin = ceil_log10((unsigned long)oi->num_attrs);
     if((bin + 1) > iter->attr_nbins) {
-  iter->attr_bins = (unsigned long *)HDrealloc(iter->attr_bins, (bin + 1) * sizeof(unsigned long));
+        iter->attr_bins = (unsigned long *)HDrealloc(iter->attr_bins, (bin + 1) * sizeof(unsigned long));
         HDassert(iter->attr_bins);
 
   /* Initialize counts for intermediate bins */
         while(iter->attr_nbins < bin)
-      iter->attr_bins[iter->attr_nbins++] = 0;
+            iter->attr_bins[iter->attr_nbins++] = 0;
         iter->attr_nbins++;
 
         /* Initialize count for new bin */
@@ -549,7 +549,7 @@ dataset_stats(iter_t *iter, const char *name, const H5O_info_t *oi)
 
     /* Get storage info */
     /* Failure 0 indistinguishable from no-data-stored 0 */
-    storage = H5Dget_storage_size(did); 
+    storage = H5Dget_storage_size(did);
 
     /* Gather layout statistics */
     if((dcpl = H5Dget_create_plist(did)) < 0)
@@ -574,7 +574,8 @@ dataset_stats(iter_t *iter, const char *name, const H5O_info_t *oi)
     if(num_ext) {
         iter->nexternal += (unsigned long)num_ext;
         iter->dset_external_storage_size += (unsigned long)storage;
-    } else
+    }
+    else
         iter->dset_storage_size += storage;
 
     /* Gather dataspace statistics */
@@ -971,7 +972,8 @@ parse_command_line(int argc, const char *argv[], struct handler_t **hand_ret)
                         error_msg("Invalid threshold for small groups\n");
                         goto error;
                     }
-                } else
+                }
+                else
                     error_msg("Missing threshold for small groups\n");
 
                 break;
@@ -993,7 +995,8 @@ parse_command_line(int argc, const char *argv[], struct handler_t **hand_ret)
                         error_msg("Invalid threshold for small datasets\n");
                         goto error;
                     }
-                } else
+                }
+                else
                     error_msg("Missing threshold for small datasets\n");
 
                 break;
@@ -1015,7 +1018,8 @@ parse_command_line(int argc, const char *argv[], struct handler_t **hand_ret)
                         error_msg("Invalid threshold for small # of attributes\n");
                         goto error;
                     }
-                } else
+                }
+                else
                     error_msg("Missing threshold for small # of attributes\n");
 
                 break;
@@ -1066,8 +1070,7 @@ parse_command_line(int argc, const char *argv[], struct handler_t **hand_ret)
                     char       **cred     = NULL;
                     char const  *ccred[3];
 
-                    if (FAIL == parse_tuple((const char *)opt_arg, ',',
-                                            &cred_str, &nelems, &cred)) {
+                    if (FAIL == parse_tuple((const char *)opt_arg, ',', &cred_str, &nelems, &cred)) {
                         error_msg("Unable to parse s3 credential\n");
                         goto error;
                     }
@@ -1078,9 +1081,7 @@ parse_command_line(int argc, const char *argv[], struct handler_t **hand_ret)
                     ccred[0] = (const char *)cred[0];
                     ccred[1] = (const char *)cred[1];
                     ccred[2] = (const char *)cred[2];
-                    if (0 ==
-                        h5tools_populate_ros3_fapl(&ros3_fa, ccred))
-                    {
+                    if (0 == h5tools_populate_ros3_fapl(&ros3_fa, ccred)) {
                         error_msg("Unable to set ros3 fapl config\n");
                         goto error;
                     }
@@ -1101,13 +1102,8 @@ parse_command_line(int argc, const char *argv[], struct handler_t **hand_ret)
                     char            *props_src = NULL;
                     char           **props     = NULL;
                     unsigned long    k         = 0;
-                    if (FAIL == parse_tuple(
-                            (const char *)opt_arg,
-                            ',',
-                            &props_src,
-                            &nelems,
-                            &props))
-                    {
+                    if (FAIL == parse_tuple((const char *)opt_arg,
+                            ',', &props_src, &nelems, &props)) {
                         error_msg("unable to parse hdfs properties tuple\n");
                         goto error;
                     }
@@ -1115,7 +1111,7 @@ parse_command_line(int argc, const char *argv[], struct handler_t **hand_ret)
                      */
                     if (nelems != 5) {
                         char str[64] = "";
-                        sprintf(str,
+                        HDsprintf(str,
                                 "expected 5 elements in hdfs properties tuple "
                                 "but found %u\n",
                                 nelems);
@@ -1130,12 +1126,10 @@ parse_command_line(int argc, const char *argv[], struct handler_t **hand_ret)
                      *         input strings... Silent overflow is possible,
                      *         albeit unlikely.
                      */
-                    if (strncmp(props[0], "", 1)) {
-                        HDstrncpy(hdfs_fa.namenode_name,
-                                (const char *)props[0],
-                                HDstrlen(props[0]));
+                    if (HDstrncmp(props[0], "", 1)) {
+                        HDstrncpy(hdfs_fa.namenode_name,(const char *)props[0], HDstrlen(props[0]));
                     }
-                    if (strncmp(props[1], "", 1)) {
+                    if (HDstrncmp(props[1], "", 1)) {
                         k = strtoul((const char *)props[1], NULL, 0);
                         if (errno == ERANGE) {
                             error_msg("supposed port number wasn't.\n");
@@ -1143,18 +1137,14 @@ parse_command_line(int argc, const char *argv[], struct handler_t **hand_ret)
                         }
                         hdfs_fa.namenode_port = (int32_t)k;
                     }
-                    if (strncmp(props[2], "", 1)) {
-                        HDstrncpy(hdfs_fa.kerberos_ticket_cache,
-                                (const char *)props[2],
-                                HDstrlen(props[2]));
+                    if (HDstrncmp(props[2], "", 1)) {
+                        HDstrncpy(hdfs_fa.kerberos_ticket_cache, (const char *)props[2], HDstrlen(props[2]));
                     }
-                    if (strncmp(props[3], "", 1)) {
-                        HDstrncpy(hdfs_fa.user_name,
-                                (const char *)props[3],
-                                HDstrlen(props[3]));
+                    if (HDstrncmp(props[3], "", 1)) {
+                        HDstrncpy(hdfs_fa.user_name, (const char *)props[3], HDstrlen(props[3]));
                     }
                     if (strncmp(props[4], "", 1)) {
-                        k = strtoul((const char *)props[4], NULL, 0);
+                        k = HDstrtoul((const char *)props[4], NULL, 0);
                         if (errno == ERANGE) {
                             error_msg("supposed buffersize number wasn't.\n");
                             goto error;
@@ -1279,13 +1269,13 @@ iter_free(iter_t *iter)
 static herr_t
 print_file_info(const iter_t *iter)
 {
-    printf("File information\n");
-    printf("\t# of unique groups: %lu\n", iter->uniq_groups);
-    printf("\t# of unique datasets: %lu\n", iter->uniq_dsets);
-    printf("\t# of unique named datatypes: %lu\n", iter->uniq_dtypes);
-    printf("\t# of unique links: %lu\n", iter->uniq_links);
-    printf("\t# of unique other: %lu\n", iter->uniq_others);
-    printf("\tMax. # of links to object: %lu\n", iter->max_links);
+    HDprintf("File information\n");
+    HDprintf("\t# of unique groups: %lu\n", iter->uniq_groups);
+    HDprintf("\t# of unique datasets: %lu\n", iter->uniq_dsets);
+    HDprintf("\t# of unique named datatypes: %lu\n", iter->uniq_dtypes);
+    HDprintf("\t# of unique links: %lu\n", iter->uniq_links);
+    HDprintf("\t# of unique other: %lu\n", iter->uniq_others);
+    HDprintf("\tMax. # of links to object: %lu\n", iter->max_links);
     HDfprintf(stdout, "\tMax. # of objects in group: %Hu\n", iter->max_fanout);
 
     return 0;
@@ -1315,15 +1305,12 @@ print_file_metadata(const iter_t *iter)
     HDfprintf(stdout, "\tUser block: %Hu\n", iter->ublk_size);
 
     HDfprintf(stdout, "\tObject headers: (total/unused)\n");
-    HDfprintf(stdout, "\t\tGroups: %Hu/%Hu\n",
-                iter->group_ohdr_info.total_size,
-    iter->group_ohdr_info.free_size);
+    HDfprintf(stdout, "\t\tGroups: %Hu/%Hu\n", iter->group_ohdr_info.total_size,
+            iter->group_ohdr_info.free_size);
     HDfprintf(stdout, "\t\tDatasets(exclude compact data): %Hu/%Hu\n",
-    iter->dset_ohdr_info.total_size,
-    iter->dset_ohdr_info.free_size);
-    HDfprintf(stdout, "\t\tDatatypes: %Hu/%Hu\n",
-                iter->dtype_ohdr_info.total_size,
-    iter->dtype_ohdr_info.free_size);
+            iter->dset_ohdr_info.total_size, iter->dset_ohdr_info.free_size);
+    HDfprintf(stdout, "\t\tDatatypes: %Hu/%Hu\n", iter->dtype_ohdr_info.total_size,
+            iter->dtype_ohdr_info.free_size);
 
     HDfprintf(stdout, "\tGroups:\n");
     HDfprintf(stdout, "\t\tB-tree/List: %Hu\n", iter->groups_btree_storage_size);
@@ -1378,32 +1365,32 @@ print_group_info(const iter_t *iter)
     unsigned long total;        /* Total count for various statistics */
     unsigned u;                 /* Local index variable */
 
-    printf("Small groups (with 0 to %u links):\n", sgroups_threshold-1);
+    HDprintf("Small groups (with 0 to %u links):\n", sgroups_threshold-1);
     total = 0;
     for(u = 0; u < (unsigned)sgroups_threshold; u++) {
         if(iter->num_small_groups[u] > 0) {
-            printf("\t# of groups with %u link(s): %lu\n", u, iter->num_small_groups[u]);
+            HDprintf("\t# of groups with %u link(s): %lu\n", u, iter->num_small_groups[u]);
             total += iter->num_small_groups[u];
         } /* end if */
     } /* end for */
-    printf("\tTotal # of small groups: %lu\n", total);
+    HDprintf("\tTotal # of small groups: %lu\n", total);
 
-    printf("Group bins:\n");
+    HDprintf("Group bins:\n");
     total = 0;
     if((iter->group_nbins > 0) && (iter->group_bins[0] > 0)) {
-       printf("\t# of groups with 0 link: %lu\n", iter->group_bins[0]);
+       HDprintf("\t# of groups with 0 link: %lu\n", iter->group_bins[0]);
        total = iter->group_bins[0];
     } /* end if */
     power = 1;
     for(u = 1; u < iter->group_nbins; u++) {
         if(iter->group_bins[u] > 0) {
-           printf("\t# of groups with %lu - %lu links: %lu\n", power, (power * 10) - 1,
+           HDprintf("\t# of groups with %lu - %lu links: %lu\n", power, (power * 10) - 1,
                     iter->group_bins[u]);
            total += iter->group_bins[u];
         } /* end if */
         power *= 10;
     } /* end for */
-    printf("\tTotal # of groups: %lu\n", total);
+    HDprintf("\tTotal # of groups: %lu\n", total);
 
     return 0;
 } /* print_group_info() */
@@ -1424,7 +1411,7 @@ print_group_info(const iter_t *iter)
 static herr_t
 print_group_metadata(const iter_t *iter)
 {
-    printf("File space information for groups' metadata (in bytes):\n");
+    HDprintf("File space information for groups' metadata (in bytes):\n");
 
     HDfprintf(stdout, "\tObject headers (total/unused): %Hu/%Hu\n",
             iter->group_ohdr_info.total_size, iter->group_ohdr_info.free_size);
@@ -1457,66 +1444,66 @@ print_dataset_info(const iter_t *iter)
     unsigned u;                 /* Local index variable */
 
     if(iter->uniq_dsets > 0) {
-        printf("Dataset dimension information:\n");
-        printf("\tMax. rank of datasets: %u\n", iter->max_dset_rank);
-        printf("\tDataset ranks:\n");
+        HDprintf("Dataset dimension information:\n");
+        HDprintf("\tMax. rank of datasets: %u\n", iter->max_dset_rank);
+        HDprintf("\tDataset ranks:\n");
         for(u = 0; u < H5S_MAX_RANK; u++)
             if(iter->dset_rank_count[u] > 0)
-                printf("\t\t# of dataset with rank %u: %lu\n", u, iter->dset_rank_count[u]);
+                HDprintf("\t\t# of dataset with rank %u: %lu\n", u, iter->dset_rank_count[u]);
 
-        printf("1-D Dataset information:\n");
+        HDprintf("1-D Dataset information:\n");
         HDfprintf(stdout, "\tMax. dimension size of 1-D datasets: %Hu\n", iter->max_dset_dims);
-        printf("\tSmall 1-D datasets (with dimension sizes 0 to %u):\n", sdsets_threshold - 1);
+        HDprintf("\tSmall 1-D datasets (with dimension sizes 0 to %u):\n", sdsets_threshold - 1);
         total = 0;
         for(u = 0; u < (unsigned)sdsets_threshold; u++) {
             if(iter->small_dset_dims[u] > 0) {
-                printf("\t\t# of datasets with dimension sizes %u: %lu\n", u,
+                HDprintf("\t\t# of datasets with dimension sizes %u: %lu\n", u,
                          iter->small_dset_dims[u]);
                 total += iter->small_dset_dims[u];
             } /* end if */
         } /* end for */
-        printf("\t\tTotal # of small datasets: %lu\n", total);
+        HDprintf("\t\tTotal # of small datasets: %lu\n", total);
 
         /* Protect against no datasets in file */
         if(iter->dset_dim_nbins > 0) {
-            printf("\t1-D Dataset dimension bins:\n");
+            HDprintf("\t1-D Dataset dimension bins:\n");
             total = 0;
             if(iter->dset_dim_bins[0] > 0) {
-                printf("\t\t# of datasets with dimension size 0: %lu\n", iter->dset_dim_bins[0]);
+                HDprintf("\t\t# of datasets with dimension size 0: %lu\n", iter->dset_dim_bins[0]);
                 total = iter->dset_dim_bins[0];
             } /* end if */
             power = 1;
             for(u = 1; u < iter->dset_dim_nbins; u++) {
                 if(iter->dset_dim_bins[u] > 0) {
-                    printf("\t\t# of datasets with dimension size %lu - %lu: %lu\n", power, (power * 10) - 1,
+                    HDprintf("\t\t# of datasets with dimension size %lu - %lu: %lu\n", power, (power * 10) - 1,
                              iter->dset_dim_bins[u]);
                     total += iter->dset_dim_bins[u];
                 } /* end if */
                 power *= 10;
             } /* end for */
-            printf("\t\tTotal # of datasets: %lu\n", total);
+            HDprintf("\t\tTotal # of datasets: %lu\n", total);
         } /* end if */
 
-        printf("Dataset storage information:\n");
+        HDprintf("Dataset storage information:\n");
         HDfprintf(stdout, "\tTotal raw data size: %Hu\n", iter->dset_storage_size);
         HDfprintf(stdout, "\tTotal external raw data size: %Hu\n", iter->dset_external_storage_size);
 
-        printf("Dataset layout information:\n");
+        HDprintf("Dataset layout information:\n");
         for(u = 0; u < H5D_NLAYOUTS; u++)
-            printf("\tDataset layout counts[%s]: %lu\n", (u == H5D_COMPACT ? "COMPACT" :
+            HDprintf("\tDataset layout counts[%s]: %lu\n", (u == H5D_COMPACT ? "COMPACT" :
                 (u == H5D_CONTIGUOUS ? "CONTIG" : (u == H5D_CHUNKED ? "CHUNKED" : "VIRTUAL"))), iter->dset_layouts[u]);
-        printf("\tNumber of external files : %lu\n", iter->nexternal);
-
-        printf("Dataset filters information:\n");
-        printf("\tNumber of datasets with:\n");
-        printf("\t\tNO filter: %lu\n", iter->dset_comptype[H5Z_FILTER_ERROR+1]);
-        printf("\t\tGZIP filter: %lu\n", iter->dset_comptype[H5Z_FILTER_DEFLATE]);
-        printf("\t\tSHUFFLE filter: %lu\n", iter->dset_comptype[H5Z_FILTER_SHUFFLE]);
-        printf("\t\tFLETCHER32 filter: %lu\n", iter->dset_comptype[H5Z_FILTER_FLETCHER32]);
-        printf("\t\tSZIP filter: %lu\n", iter->dset_comptype[H5Z_FILTER_SZIP]);
-        printf("\t\tNBIT filter: %lu\n", iter->dset_comptype[H5Z_FILTER_NBIT]);
-        printf("\t\tSCALEOFFSET filter: %lu\n", iter->dset_comptype[H5Z_FILTER_SCALEOFFSET]);
-        printf("\t\tUSER-DEFINED filter: %lu\n", iter->dset_comptype[H5_NFILTERS_IMPL-1]);
+        HDprintf("\tNumber of external files : %lu\n", iter->nexternal);
+
+        HDprintf("Dataset filters information:\n");
+        HDprintf("\tNumber of datasets with:\n");
+        HDprintf("\t\tNO filter: %lu\n", iter->dset_comptype[H5Z_FILTER_ERROR+1]);
+        HDprintf("\t\tGZIP filter: %lu\n", iter->dset_comptype[H5Z_FILTER_DEFLATE]);
+        HDprintf("\t\tSHUFFLE filter: %lu\n", iter->dset_comptype[H5Z_FILTER_SHUFFLE]);
+        HDprintf("\t\tFLETCHER32 filter: %lu\n", iter->dset_comptype[H5Z_FILTER_FLETCHER32]);
+        HDprintf("\t\tSZIP filter: %lu\n", iter->dset_comptype[H5Z_FILTER_SZIP]);
+        HDprintf("\t\tNBIT filter: %lu\n", iter->dset_comptype[H5Z_FILTER_NBIT]);
+        HDprintf("\t\tSCALEOFFSET filter: %lu\n", iter->dset_comptype[H5Z_FILTER_SCALEOFFSET]);
+        HDprintf("\t\tUSER-DEFINED filter: %lu\n", iter->dset_comptype[H5_NFILTERS_IMPL-1]);
     } /* end if */
 
     return 0;
@@ -1539,7 +1526,7 @@ print_dataset_info(const iter_t *iter)
 static herr_t
 print_dset_metadata(const iter_t *iter)
 {
-    printf("File space information for datasets' metadata (in bytes):\n");
+    HDprintf("File space information for datasets' metadata (in bytes):\n");
 
     HDfprintf(stdout, "\tObject headers (total/unused): %Hu/%Hu\n",
             iter->dset_ohdr_info.total_size, iter->dset_ohdr_info.free_size);
@@ -1573,20 +1560,20 @@ print_dset_dtype_meta(const iter_t *iter)
     unsigned u;                 /* Local index variable */
 
     if(iter->dset_ntypes) {
-        printf("Dataset datatype information:\n");
-        printf("\t# of unique datatypes used by datasets: %lu\n", iter->dset_ntypes);
+        HDprintf("Dataset datatype information:\n");
+        HDprintf("\t# of unique datatypes used by datasets: %lu\n", iter->dset_ntypes);
         total = 0;
         for(u = 0; u < iter->dset_ntypes; u++) {
             H5Tencode(iter->dset_type_info[u].tid, NULL, &dtype_size);
-            printf("\tDataset datatype #%u:\n", u);
-            printf("\t\tCount (total/named) = (%lu/%lu)\n",
+            HDprintf("\tDataset datatype #%u:\n", u);
+            HDprintf("\t\tCount (total/named) = (%lu/%lu)\n",
                     iter->dset_type_info[u].count, iter->dset_type_info[u].named);
-            printf("\t\tSize (desc./elmt) = (%lu/%lu)\n", (unsigned long)dtype_size,
+            HDprintf("\t\tSize (desc./elmt) = (%lu/%lu)\n", (unsigned long)dtype_size,
                     (unsigned long)H5Tget_size(iter->dset_type_info[u].tid));
             H5Tclose(iter->dset_type_info[u].tid);
             total += iter->dset_type_info[u].count;
         } /* end for */
-        printf("\tTotal dataset datatype count: %lu\n", total);
+        HDprintf("\tTotal dataset datatype count: %lu\n", total);
     } /* end if */
 
     return 0;
@@ -1614,29 +1601,29 @@ print_attr_info(const iter_t *iter)
     unsigned long total;        /* Total count for various statistics */
     unsigned u;                 /* Local index variable */
 
-    printf("Small # of attributes (objects with 1 to %u attributes):\n", sattrs_threshold);
+    HDprintf("Small # of attributes (objects with 1 to %u attributes):\n", sattrs_threshold);
     total = 0;
     for(u = 1; u <= (unsigned)sattrs_threshold; u++) {
         if(iter->num_small_attrs[u] > 0) {
-            printf("\t# of objects with %u attributes: %lu\n", u, iter->num_small_attrs[u]);
+            HDprintf("\t# of objects with %u attributes: %lu\n", u, iter->num_small_attrs[u]);
             total += iter->num_small_attrs[u];
         } /* end if */
     } /* end for */
-    printf("\tTotal # of objects with small # of attributes: %lu\n", total);
+    HDprintf("\tTotal # of objects with small # of attributes: %lu\n", total);
 
-    printf("Attribute bins:\n");
+    HDprintf("Attribute bins:\n");
     total = 0;
     power = 1;
     for(u = 1; u < iter->attr_nbins; u++) {
         if(iter->attr_bins[u] > 0) {
-           printf("\t# of objects with %lu - %lu attributes: %lu\n", power, (power * 10) - 1,
+           HDprintf("\t# of objects with %lu - %lu attributes: %lu\n", power, (power * 10) - 1,
                     iter->attr_bins[u]);
            total += iter->attr_bins[u];
         } /* end if */
         power *= 10;
     } /* end for */
-    printf("\tTotal # of objects with attributes: %lu\n", total);
-    printf("\tMax. # of attributes to objects: %lu\n", (unsigned long)iter->max_attrs);
+    HDprintf("\tTotal # of objects with attributes: %lu\n", total);
+    HDprintf("\tMax. # of attributes to objects: %lu\n", (unsigned long)iter->max_attrs);
 
     return 0;
 } /* print_attr_info() */
@@ -1664,29 +1651,29 @@ print_freespace_info(const iter_t *iter)
 
     HDfprintf(stdout, "Free-space persist: %s\n", iter->fs_persist ? "TRUE" : "FALSE");
     HDfprintf(stdout, "Free-space section threshold: %Hu bytes\n", iter->fs_threshold);
-    printf("Small size free-space sections (< %u bytes):\n", (unsigned)SIZE_SMALL_SECTS);
+    HDprintf("Small size free-space sections (< %u bytes):\n", (unsigned)SIZE_SMALL_SECTS);
     total = 0;
     for(u = 0; u < SIZE_SMALL_SECTS; u++) {
         if(iter->num_small_sects[u] > 0) {
-            printf("\t# of sections of size %u: %lu\n", u, iter->num_small_sects[u]);
+            HDprintf("\t# of sections of size %u: %lu\n", u, iter->num_small_sects[u]);
             total += iter->num_small_sects[u];
         } /* end if */
     } /* end for */
-    printf("\tTotal # of small size sections: %lu\n", total);
+    HDprintf("\tTotal # of small size sections: %lu\n", total);
 
-    printf("Free-space section bins:\n");
+    HDprintf("Free-space section bins:\n");
 
     total = 0;
     power = 1;
     for(u = 1; u < iter->sect_nbins; u++) {
         if(iter->sect_bins[u] > 0) {
-           printf("\t# of sections of size %lu - %lu: %lu\n", power, (power * 10) - 1,
+           HDprintf("\t# of sections of size %lu - %lu: %lu\n", power, (power * 10) - 1,
                     iter->sect_bins[u]);
            total += iter->sect_bins[u];
         } /* end if */
         power *= 10;
     } /* end for */
-    printf("\tTotal # of sections: %lu\n", total);
+    HDprintf("\tTotal # of sections: %lu\n", total);
 
     return 0;
 } /* print_freespace_info() */
@@ -1714,7 +1701,7 @@ print_storage_summary(const iter_t *iter)
 
     HDfprintf(stdout, "File space management strategy: %s\n", FS_STRATEGY_NAME[iter->fs_strategy]);
     HDfprintf(stdout, "File space page size: %Hu bytes\n", iter->fsp_size);
-    printf("Summary of file space information:\n");
+    HDprintf("Summary of file space information:\n");
     total_meta =
             iter->super_size + iter->super_ext_size + iter->ublk_size +
             iter->group_ohdr_info.total_size +
@@ -1822,7 +1809,7 @@ print_file_statistics(const iter_t *iter)
 static void
 print_object_statistics(const char *name)
 {
-    printf("Object name %s\n", name);
+    HDprintf("Object name %s\n", name);
 } /* print_object_statistics() */
 
 
@@ -1905,7 +1892,8 @@ main(int argc, const char *argv[])
             conf_fa = (void *)&ros3_fa;
 #endif /* H5_HAVE_ROS3_VFD */
 
-        } else if (!HDstrcmp(drivername, "hdfs")) {
+        }
+        else if (!HDstrcmp(drivername, "hdfs")) {
 #ifndef H5_HAVE_LIBHDFS
             error_msg("HDFS VFD not enabled.\n\n");
             goto done;
@@ -1921,11 +1909,7 @@ main(int argc, const char *argv[])
                 error_msg("Unable to create fapl entry\n");
                 goto done;
             }
-            if (1 > h5tools_set_configured_fapl(
-                    fapl_id,
-                    drivername,
-                    conf_fa))
-            {
+            if (1 > h5tools_set_configured_fapl(fapl_id, drivername, conf_fa)) {
                 error_msg("Unable to set fapl\n");
                 goto done;
             }
@@ -1944,7 +1928,7 @@ main(int argc, const char *argv[])
         hid_t               fcpl;
         H5F_info2_t         finfo;
 
-        printf("Filename: %s\n", fname);
+        HDprintf("Filename: %s\n", fname);
 
         fid = H5Fopen(fname, H5F_ACC_RDONLY, fapl_id);
         if(fid < 0) {
@@ -1979,7 +1963,7 @@ main(int argc, const char *argv[])
 
         if(iter.num_small_groups == NULL || iter.num_small_attrs == NULL || iter.small_dset_dims == NULL) {
             error_msg("Unable to allocate memory for tracking small groups/datasets/attributes\n");
-                h5tools_setstatus(EXIT_FAILURE);
+            h5tools_setstatus(EXIT_FAILURE);
             goto done;
         }
 
@@ -2008,7 +1992,8 @@ main(int argc, const char *argv[])
                 if(h5trav_visit(fid, hand->obj[u], TRUE, TRUE, obj_stats, lnk_stats, &iter, H5O_INFO_ALL) < 0) {
                     error_msg("unable to traverse object \"%s\"\n", hand->obj[u]);
                     h5tools_setstatus(EXIT_FAILURE);
-                } else
+                }
+                else
                     print_statistics(hand->obj[u], &iter);
             } /* end for */
         } /* end if */
@@ -2016,7 +2001,8 @@ main(int argc, const char *argv[])
             if(h5trav_visit(fid, "/", TRUE, TRUE, obj_stats, lnk_stats, &iter, H5O_INFO_ALL) < 0) {
                 error_msg("unable to traverse objects/links in file \"%s\"\n", fname);
                 h5tools_setstatus(EXIT_FAILURE);
-            } else
+            }
+            else
                 print_statistics("/", &iter);
         } /* end else */
     } /* end if */
diff --git a/tools/src/misc/h5debug.c b/tools/src/misc/h5debug.c
index 088e6e9..96d6b9f 100644
--- a/tools/src/misc/h5debug.c
+++ b/tools/src/misc/h5debug.c
@@ -21,19 +21,19 @@
  *
  *-------------------------------------------------------------------------
  */
-#define H5A_FRIEND		/*suppress error about including H5Apkg  */
-#define H5B2_FRIEND		/*suppress error about including H5B2pkg */
-#define H5B2_TESTING		/*suppress warning about H5B2 testing funcs*/
-#define H5D_FRIEND		/*suppress error about including H5Dpkg  */
-#define H5EA_FRIEND		/*suppress error about including H5EApkg */
-#define H5EA_TESTING		/*suppress warning about H5EA testing funcs*/
-#define H5FA_FRIEND		/*suppress error about including H5FApkg */
-#define H5FA_TESTING		/*suppress warning about H5FA testing funcs*/
-#define H5F_FRIEND		/*suppress error about including H5Fpkg  */
-#define H5G_FRIEND		/*suppress error about including H5Gpkg  */
-#define H5HF_FRIEND		/*suppress error about including H5HFpkg */
-#define H5O_FRIEND		/*suppress error about including H5Opkg  */
-#define H5SM_FRIEND		/*suppress error about including H5SMpkg */
+#define H5A_FRIEND        /*suppress error about including H5Apkg  */
+#define H5B2_FRIEND        /*suppress error about including H5B2pkg */
+#define H5B2_TESTING        /*suppress warning about H5B2 testing funcs*/
+#define H5D_FRIEND        /*suppress error about including H5Dpkg  */
+#define H5EA_FRIEND        /*suppress error about including H5EApkg */
+#define H5EA_TESTING        /*suppress warning about H5EA testing funcs*/
+#define H5FA_FRIEND        /*suppress error about including H5FApkg */
+#define H5FA_TESTING        /*suppress warning about H5FA testing funcs*/
+#define H5F_FRIEND        /*suppress error about including H5Fpkg  */
+#define H5G_FRIEND        /*suppress error about including H5Gpkg  */
+#define H5HF_FRIEND        /*suppress error about including H5HFpkg */
+#define H5O_FRIEND        /*suppress error about including H5Opkg  */
+#define H5SM_FRIEND        /*suppress error about including H5SMpkg */
 
 #include "H5private.h"  /* Generic Functions    */
 #include "H5Apkg.h"     /* Attributes           */
@@ -57,7 +57,7 @@
 
 #define VCOL    50
 
-
+
 /*-------------------------------------------------------------------------
  * Function:    get_H5B2_class
  *
@@ -80,68 +80,68 @@ get_H5B2_class(const uint8_t *sig)
     const H5B2_class_t *cls;
 
     switch(subtype) {
-        case H5B2_TEST_ID:
-            cls = H5B2_TEST;
-            break;
+    case H5B2_TEST_ID:
+        cls = H5B2_TEST;
+        break;
 
-        case H5B2_FHEAP_HUGE_INDIR_ID:
-            cls = H5HF_HUGE_BT2_INDIR;
-            break;
+    case H5B2_FHEAP_HUGE_INDIR_ID:
+        cls = H5HF_HUGE_BT2_INDIR;
+        break;
 
-        case H5B2_FHEAP_HUGE_FILT_INDIR_ID:
-            cls = H5HF_HUGE_BT2_FILT_INDIR;
-            break;
+    case H5B2_FHEAP_HUGE_FILT_INDIR_ID:
+        cls = H5HF_HUGE_BT2_FILT_INDIR;
+        break;
 
-        case H5B2_FHEAP_HUGE_DIR_ID:
-            cls = H5HF_HUGE_BT2_DIR;
-            break;
+    case H5B2_FHEAP_HUGE_DIR_ID:
+        cls = H5HF_HUGE_BT2_DIR;
+        break;
 
-        case H5B2_FHEAP_HUGE_FILT_DIR_ID:
-            cls = H5HF_HUGE_BT2_FILT_DIR;
-            break;
+    case H5B2_FHEAP_HUGE_FILT_DIR_ID:
+        cls = H5HF_HUGE_BT2_FILT_DIR;
+        break;
 
-        case H5B2_GRP_DENSE_NAME_ID:
-            cls = H5G_BT2_NAME;
-            break;
+    case H5B2_GRP_DENSE_NAME_ID:
+        cls = H5G_BT2_NAME;
+        break;
 
-        case H5B2_GRP_DENSE_CORDER_ID:
-            cls = H5G_BT2_CORDER;
-            break;
+    case H5B2_GRP_DENSE_CORDER_ID:
+        cls = H5G_BT2_CORDER;
+        break;
 
-        case H5B2_SOHM_INDEX_ID:
-            cls = H5SM_INDEX;
-            break;
+    case H5B2_SOHM_INDEX_ID:
+        cls = H5SM_INDEX;
+        break;
 
-        case H5B2_ATTR_DENSE_NAME_ID:
-            cls = H5A_BT2_NAME;
-            break;
+    case H5B2_ATTR_DENSE_NAME_ID:
+        cls = H5A_BT2_NAME;
+        break;
 
-        case H5B2_ATTR_DENSE_CORDER_ID:
-            cls = H5A_BT2_CORDER;
-            break;
+    case H5B2_ATTR_DENSE_CORDER_ID:
+        cls = H5A_BT2_CORDER;
+        break;
 
-        case H5B2_CDSET_ID:
-            cls = H5D_BT2;
-            break;
+    case H5B2_CDSET_ID:
+        cls = H5D_BT2;
+        break;
 
-        case H5B2_CDSET_FILT_ID:
-            cls = H5D_BT2_FILT;
-            break;
+    case H5B2_CDSET_FILT_ID:
+        cls = H5D_BT2_FILT;
+        break;
 
-        case H5B2_TEST2_ID:
-            cls = H5B2_TEST2;
-            break;
+    case H5B2_TEST2_ID:
+        cls = H5B2_TEST2;
+        break;
 
-        case H5B2_NUM_BTREE_ID:
-        default:
-            HDfprintf(stderr, "Unknown v2 B-tree subtype %u\n", (unsigned)(subtype));
-            HDexit(4);
+    case H5B2_NUM_BTREE_ID:
+    default:
+        HDfprintf(stderr, "Unknown v2 B-tree subtype %u\n", (unsigned)(subtype));
+        HDexit(4);
     } /* end switch */
 
     return(cls);
 } /* end get_H5B2_class() */
 
-
+
 /*-------------------------------------------------------------------------
  * Function:    get_H5EA_class
  *
@@ -164,28 +164,28 @@ get_H5EA_class(const uint8_t *sig)
     const H5EA_class_t *cls;
 
     switch(clsid) {
-        case H5EA_CLS_TEST_ID:
-            cls = H5EA_CLS_TEST;
-            break;
+    case H5EA_CLS_TEST_ID:
+        cls = H5EA_CLS_TEST;
+        break;
 
-        case H5EA_CLS_CHUNK_ID:
-            cls = H5EA_CLS_CHUNK;
-            break;
+    case H5EA_CLS_CHUNK_ID:
+        cls = H5EA_CLS_CHUNK;
+        break;
 
-        case H5EA_CLS_FILT_CHUNK_ID:
-            cls = H5EA_CLS_FILT_CHUNK;
-            break;
+    case H5EA_CLS_FILT_CHUNK_ID:
+        cls = H5EA_CLS_FILT_CHUNK;
+        break;
 
-        case H5EA_NUM_CLS_ID:
-        default:
-            HDfprintf(stderr, "Unknown extensible array class %u\n", (unsigned)(clsid));
-            HDexit(4);
+    case H5EA_NUM_CLS_ID:
+    default:
+        HDfprintf(stderr, "Unknown extensible array class %u\n", (unsigned)(clsid));
+        HDexit(4);
     } /* end switch */
 
     return(cls);
 } /* end get_H5EA_class() */
 
-
+
 /*-------------------------------------------------------------------------
  * Function:    get_H5FA_class
  *
@@ -208,28 +208,28 @@ get_H5FA_class(const uint8_t *sig)
     const H5FA_class_t *cls;
 
     switch(clsid) {
-        case H5FA_CLS_TEST_ID:
-            cls = H5FA_CLS_TEST;
-            break;
+    case H5FA_CLS_TEST_ID:
+        cls = H5FA_CLS_TEST;
+        break;
 
-        case H5FA_CLS_CHUNK_ID:
-            cls = H5FA_CLS_CHUNK;
-            break;
+    case H5FA_CLS_CHUNK_ID:
+        cls = H5FA_CLS_CHUNK;
+        break;
 
-        case H5FA_CLS_FILT_CHUNK_ID:
-            cls = H5FA_CLS_FILT_CHUNK;
-            break;
+    case H5FA_CLS_FILT_CHUNK_ID:
+        cls = H5FA_CLS_FILT_CHUNK;
+        break;
 
-        case H5FA_NUM_CLS_ID: 
-        default:
-            HDfprintf(stderr, "Unknown fixed array class %u\n", (unsigned)(clsid));
-            HDexit(4);
+    case H5FA_NUM_CLS_ID:
+    default:
+        HDfprintf(stderr, "Unknown fixed array class %u\n", (unsigned)(clsid));
+        HDexit(4);
     } /* end switch */
 
     return(cls);
 } /* end get_H5FA_class() */
 
-
+
 /*-------------------------------------------------------------------------
  * Function:    main
  *
@@ -254,13 +254,13 @@ main(int argc, char *argv[])
     uint8_t     sig[H5F_SIGNATURE_LEN];
     size_t      u;
     H5E_auto2_t func;
-    void 	*edata;
+    void     *edata;
     hbool_t     api_ctx_pushed = FALSE;             /* Whether API context pushed */
     herr_t      status = SUCCEED;
 
     if(argc == 1) {
-  	HDfprintf(stderr, "Usage: %s filename [signature-addr [extra]]\n", argv[0]);
-  	HDexit(1);
+        HDfprintf(stderr, "Usage: %s filename [signature-addr [extra]]\n", argv[0]);
+        HDexit(1);
     } /* end if */
 
     /* Initialize the library */
@@ -274,15 +274,15 @@ main(int argc, char *argv[])
     H5Eset_auto2(H5E_DEFAULT, NULL, NULL);
 
     /*
-     * Open the file and get the file descriptor.
-     */
+    * Open the file and get the file descriptor.
+    */
     if((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) {
         HDfprintf(stderr, "cannot create file access property list\n");
         HDexit(1);
     } /* end if */
     if(HDstrchr(argv[1], '%'))
         if(H5Pset_fapl_family (fapl, (hsize_t)0, H5P_DEFAULT) < 0) {
-            fprintf(stderr, "cannot set file access property list\n");
+            HDfprintf(stderr, "cannot set file access property list\n");
             HDexit(1);
         }
     if((fid = H5Fopen(argv[1], H5F_ACC_RDONLY, fapl)) < 0) {
@@ -309,8 +309,8 @@ main(int argc, char *argv[])
     }
 
     /*
-     * Parse command arguments.
-     */
+    * Parse command arguments.
+    */
     if(argc > 2)
         addr = (haddr_t)HDstrtoll(argv[2], NULL, 0);
     if(argc > 3)
@@ -323,8 +323,8 @@ main(int argc, char *argv[])
         extra4 = (haddr_t)HDstrtoll(argv[6], NULL, 0);
 
     /*
-     * Read the signature at the specified file position.
-     */
+    * Read the signature at the specified file position.
+    */
     HDfprintf(stdout, "Reading signature at address %a (rel)\n", addr);
     if(H5F_block_read(f, H5FD_MEM_SUPER, addr, sizeof(sig), sig) < 0) {
         HDfprintf(stderr, "cannot read signature\n");
@@ -332,26 +332,28 @@ main(int argc, char *argv[])
     }
     if(!HDmemcmp(sig, H5F_SIGNATURE, (size_t)H5F_SIGNATURE_LEN)) {
         /*
-         * Debug the file's super block.
-         */
+        * Debug the file's super block.
+        */
         status = H5F_debug(f, stdout, 0, VCOL);
 
     } else if(!HDmemcmp(sig, H5HL_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
         /*
-         * Debug a local heap.
-         */
+        * Debug a local heap.
+        */
         status = H5HL_debug(f, addr, stdout, 0, VCOL);
 
-    } else if(!HDmemcmp (sig, H5HG_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
-	/*
-	 * Debug a global heap collection.
-	 */
-	status = H5HG_debug(f, addr, stdout, 0, VCOL);
+    }
+    else if(!HDmemcmp (sig, H5HG_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+        /*
+        * Debug a global heap collection.
+        */
+        status = H5HG_debug(f, addr, stdout, 0, VCOL);
 
-    } else if(!HDmemcmp(sig, H5G_NODE_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+    }
+    else if(!HDmemcmp(sig, H5G_NODE_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
         /*
-         * Debug a symbol table node.
-         */
+        * Debug a symbol table node.
+        */
 
         /* Check for extra parameters */
         if(extra == 0) {
@@ -362,107 +364,109 @@ main(int argc, char *argv[])
 
         status = H5G_node_debug(f, addr, stdout, 0, VCOL, extra);
 
-    } else if(!HDmemcmp(sig, H5B_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+    }
+    else if(!HDmemcmp(sig, H5B_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
         /*
-         * Debug a B-tree.  B-trees are debugged through the B-tree
-         * subclass.  The subclass identifier is the byte immediately
-         * after the B-tree signature.
-         */
+        * Debug a B-tree.  B-trees are debugged through the B-tree
+        * subclass.  The subclass identifier is the byte immediately
+        * after the B-tree signature.
+        */
         H5B_subid_t subtype = (H5B_subid_t)sig[H5_SIZEOF_MAGIC];
         unsigned    ndims;
         uint32_t    dim[H5O_LAYOUT_NDIMS];
 
         switch(subtype) {
-            case H5B_SNODE_ID:
-                /* Check for extra parameters */
-                if(extra == 0) {
-                    HDfprintf(stderr, "\nWarning: Providing the group's local heap address will give more information\n");
-                    HDfprintf(stderr, "B-tree symbol table node usage:\n");
-                    HDfprintf(stderr, "\th5debug <filename> <B-tree node address> <address of local heap>\n\n");
-                    HDexit(4);
-                } /* end if */
+        case H5B_SNODE_ID:
+            /* Check for extra parameters */
+            if(extra == 0) {
+                HDfprintf(stderr, "\nWarning: Providing the group's local heap address will give more information\n");
+                HDfprintf(stderr, "B-tree symbol table node usage:\n");
+                HDfprintf(stderr, "\th5debug <filename> <B-tree node address> <address of local heap>\n\n");
+                HDexit(4);
+            } /* end if */
 
-                status = H5G_node_debug(f, addr, stdout, 0, VCOL, extra);
-                break;
+            status = H5G_node_debug(f, addr, stdout, 0, VCOL, extra);
+            break;
 
-            case H5B_CHUNK_ID:
-                /* Check for extra parameters */
-                if(extra == 0) {
-                    HDfprintf(stderr, "ERROR: Need number of dimensions of chunk in order to dump chunk B-tree node\n");
+        case H5B_CHUNK_ID:
+            /* Check for extra parameters */
+            if(extra == 0) {
+                HDfprintf(stderr, "ERROR: Need number of dimensions of chunk in order to dump chunk B-tree node\n");
+                HDfprintf(stderr, "B-tree chunked storage node usage:\n");
+                HDfprintf(stderr, "\th5debug <filename> <B-tree node address> <# of dimensions> <slowest chunk dim>...<fastest chunk dim>\n");
+                HDexit(4);
+            } /* end if */
+
+            /* Build array of chunk dimensions */
+            ndims = (unsigned)extra;
+            dim[0] = (uint32_t)extra2;
+            if(ndims > 1)
+                dim[1] = (uint32_t)extra3;
+            if(ndims > 2)
+                dim[2] = (uint32_t)extra4;
+
+            /* Check for dimension error */
+            if(ndims > 3) {
+                HDfprintf(stderr, "ERROR: Only 3 dimensions support currently (fix h5debug)\n");
+                HDfprintf(stderr, "B-tree chunked storage node usage:\n");
+                HDfprintf(stderr, "\th5debug <filename> <B-tree node address> <# of dimensions> <slowest chunk dim>...<fastest chunk dim>\n");
+                HDexit(4);
+            } /* end for */
+            for(u = 0; u < ndims; u++)
+                if(0 == dim[u]) {
+                    HDfprintf(stderr, "ERROR: Chunk dimensions should be >0\n");
                     HDfprintf(stderr, "B-tree chunked storage node usage:\n");
                     HDfprintf(stderr, "\th5debug <filename> <B-tree node address> <# of dimensions> <slowest chunk dim>...<fastest chunk dim>\n");
                     HDexit(4);
                 } /* end if */
 
-                /* Build array of chunk dimensions */
-                ndims = (unsigned)extra;
-                dim[0] = (uint32_t)extra2;
-                if(ndims > 1)
-                    dim[1] = (uint32_t)extra3;
-                if(ndims > 2)
-                    dim[2] = (uint32_t)extra4;
-
-                /* Check for dimension error */
-                if(ndims > 3) {
-                    HDfprintf(stderr, "ERROR: Only 3 dimensions support currently (fix h5debug)\n");
-                    HDfprintf(stderr, "B-tree chunked storage node usage:\n");
-                    HDfprintf(stderr, "\th5debug <filename> <B-tree node address> <# of dimensions> <slowest chunk dim>...<fastest chunk dim>\n");
-                    HDexit(4);
-                } /* end for */
-                for(u = 0; u < ndims; u++)
-                    if(0 == dim[u]) {
-                        HDfprintf(stderr, "ERROR: Chunk dimensions should be >0\n");
-                        HDfprintf(stderr, "B-tree chunked storage node usage:\n");
-                        HDfprintf(stderr, "\th5debug <filename> <B-tree node address> <# of dimensions> <slowest chunk dim>...<fastest chunk dim>\n");
-                        HDexit(4);
-                    } /* end if */
-
-                /* Set the last dimension (the element size) to zero */
-                dim[ndims] = 0;
-
-                status = H5D_btree_debug(f, addr, stdout, 0, VCOL, ndims, dim);
-                break;
-
-            case H5B_NUM_BTREE_ID:
-            default:
-                HDfprintf(stderr, "Unknown v1 B-tree subtype %u\n", (unsigned)(subtype));
-                HDexit(4);
+            /* Set the last dimension (the element size) to zero */
+            dim[ndims] = 0;
+
+            status = H5D_btree_debug(f, addr, stdout, 0, VCOL, ndims, dim);
+            break;
+
+        case H5B_NUM_BTREE_ID:
+        default:
+            HDfprintf(stderr, "Unknown v1 B-tree subtype %u\n", (unsigned)(subtype));
+            HDexit(4);
         }
 
-    } else if(!HDmemcmp(sig, H5B2_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+    }
+    else if(!HDmemcmp(sig, H5B2_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
         /*
-         * Debug a v2 B-tree header.
-         */
+        * Debug a v2 B-tree header.
+        */
         const H5B2_class_t *cls = get_H5B2_class(sig);
         HDassert(cls);
 
-	    if((cls == H5D_BT2 || cls == H5D_BT2_FILT) && extra == 0) {
+        if((cls == H5D_BT2 || cls == H5D_BT2_FILT) && extra == 0) {
             HDfprintf(stderr, "ERROR: Need v2 B-tree header address and object header address containing the layout message in order to dump header\n");
             HDfprintf(stderr, "v2 B-tree hdr usage:\n");
             HDfprintf(stderr, "\th5debug <filename> <v2 B-tree header address> <object header address>\n");
             HDexit(4);
-	    } /* end if */
+        } /* end if */
 
         status = H5B2__hdr_debug(f, addr, stdout, 0, VCOL, cls, (haddr_t)extra);
 
-    } else if(!HDmemcmp(sig, H5B2_INT_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+    }
+    else if(!HDmemcmp(sig, H5B2_INT_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
         /*
-         * Debug a v2 B-tree internal node.
-         */
+        * Debug a v2 B-tree internal node.
+        */
         const H5B2_class_t *cls = get_H5B2_class(sig);
         HDassert(cls);
 
         /* Check for enough valid parameters */
-	if((cls == H5D_BT2 || cls == H5D_BT2_FILT) &&
-	   (extra == 0 || extra2 == 0 || extra3 == 0 || extra4 == 0)) {
-
-            fprintf(stderr, "ERROR: Need v2 B-tree header address, the node's number of records, depth, and object header address containing the layout message in order to dump internal node\n");
-            fprintf(stderr, "NOTE: Leaf nodes are depth 0, the internal nodes above them are depth 1, etc.\n");
-            fprintf(stderr, "v2 B-tree internal node usage:\n");
-            fprintf(stderr, "\th5debug <filename> <internal node address> <v2 B-tree header address> <number of records> <depth> <object header address>\n");
+        if((cls == H5D_BT2 || cls == H5D_BT2_FILT) && (extra == 0 || extra2 == 0 || extra3 == 0 || extra4 == 0)) {
+            HDfprintf(stderr, "ERROR: Need v2 B-tree header address, the node's number of records, depth, and object header address containing the layout message in order to dump internal node\n");
+            HDfprintf(stderr, "NOTE: Leaf nodes are depth 0, the internal nodes above them are depth 1, etc.\n");
+            HDfprintf(stderr, "v2 B-tree internal node usage:\n");
+            HDfprintf(stderr, "\th5debug <filename> <internal node address> <v2 B-tree header address> <number of records> <depth> <object header address>\n");
             HDexit(4);
 
-        } else if(extra == 0 || extra2 == 0 || extra3 == 0) {
+        }
+        else if(extra == 0 || extra2 == 0 || extra3 == 0) {
             HDfprintf(stderr, "ERROR: Need v2 B-tree header address and the node's number of records and depth in order to dump internal node\n");
             HDfprintf(stderr, "NOTE: Leaf nodes are depth 0, the internal nodes above them are depth 1, etc.\n");
             HDfprintf(stderr, "v2 B-tree internal node usage:\n");
@@ -472,23 +476,24 @@ main(int argc, char *argv[])
 
         status = H5B2__int_debug(f, addr, stdout, 0, VCOL, cls, extra, (unsigned)extra2, (unsigned)extra3, (haddr_t)extra4);
 
-    } else if(!HDmemcmp(sig, H5B2_LEAF_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+    }
+    else if(!HDmemcmp(sig, H5B2_LEAF_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
         /*
-         * Debug a v2 B-tree leaf node.
-         */
+        * Debug a v2 B-tree leaf node.
+        */
         const H5B2_class_t *cls = get_H5B2_class(sig);
         HDassert(cls);
 
         /* Check for enough valid parameters */
-	if((cls == H5D_BT2 || cls == H5D_BT2_FILT) &&
-	   (extra == 0 || extra2 == 0 || extra3 == 0 )) {
+        if((cls == H5D_BT2 || cls == H5D_BT2_FILT) && (extra == 0 || extra2 == 0 || extra3 == 0 )) {
 
-            fprintf(stderr, "ERROR: Need v2 B-tree header address, number of records, and object header address containing the layout message in order to dump leaf node\n");
-            fprintf(stderr, "v2 B-tree leaf node usage:\n");
-            fprintf(stderr, "\th5debug <filename> <leaf node address> <v2 B-tree header address> <number of records> <object header address>\n");
+            HDfprintf(stderr, "ERROR: Need v2 B-tree header address, number of records, and object header address containing the layout message in order to dump leaf node\n");
+            HDfprintf(stderr, "v2 B-tree leaf node usage:\n");
+            HDfprintf(stderr, "\th5debug <filename> <leaf node address> <v2 B-tree header address> <number of records> <object header address>\n");
             HDexit(4);
 
-        } else if(extra == 0 || extra2 == 0) {
+        }
+        else if(extra == 0 || extra2 == 0) {
             HDfprintf(stderr, "ERROR: Need v2 B-tree header address and number of records in order to dump leaf node\n");
             HDfprintf(stderr, "v2 B-tree leaf node usage:\n");
             HDfprintf(stderr, "\th5debug <filename> <leaf node address> <v2 B-tree header address> <number of records>\n");
@@ -497,16 +502,18 @@ main(int argc, char *argv[])
 
         status = H5B2__leaf_debug(f, addr, stdout, 0, VCOL, cls, extra, (unsigned)extra2, (haddr_t)extra3);
 
-    } else if(!HDmemcmp(sig, H5HF_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+    }
+    else if(!HDmemcmp(sig, H5HF_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
         /*
-         * Debug a fractal heap header.
-         */
+        * Debug a fractal heap header.
+        */
         status = H5HF_hdr_debug(f, addr, stdout, 0, VCOL);
 
-    } else if(!HDmemcmp(sig, H5HF_DBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+    }
+    else if(!HDmemcmp(sig, H5HF_DBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
         /*
-         * Debug a fractal heap direct block.
-         */
+        * Debug a fractal heap direct block.
+        */
 
         /* Check for enough valid parameters */
         if(extra == 0 || extra2 == 0) {
@@ -518,10 +525,11 @@ main(int argc, char *argv[])
 
         status = H5HF_dblock_debug(f, addr, stdout, 0, VCOL, extra, (size_t)extra2);
 
-    } else if(!HDmemcmp(sig, H5HF_IBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+    }
+    else if(!HDmemcmp(sig, H5HF_IBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
         /*
-         * Debug a fractal heap indirect block.
-         */
+        * Debug a fractal heap indirect block.
+        */
 
         /* Check for enough valid parameters */
         if(extra == 0 || extra2 == 0) {
@@ -533,17 +541,19 @@ main(int argc, char *argv[])
 
         status = H5HF_iblock_debug(f, addr, stdout, 0, VCOL, extra, (unsigned)extra2);
 
-    } else if(!HDmemcmp(sig, H5FS_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+    }
+    else if(!HDmemcmp(sig, H5FS_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
         /*
-         * Debug a free space header.
-         */
+        * Debug a free space header.
+        */
 
         status = H5FS_debug(f, addr, stdout, 0, VCOL);
 
-    } else if(!HDmemcmp(sig, H5FS_SINFO_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+    }
+    else if(!HDmemcmp(sig, H5FS_SINFO_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
         /*
-         * Debug free space serialized sections.
-         */
+        * Debug free space serialized sections.
+        */
 
         /* Check for enough valid parameters */
         if(extra == 0 || extra2 == 0) {
@@ -555,17 +565,19 @@ main(int argc, char *argv[])
 
         status = H5FS_sects_debug(f, addr, stdout, 0, VCOL, extra, extra2);
 
-    } else if(!HDmemcmp(sig, H5SM_TABLE_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+    }
+    else if(!HDmemcmp(sig, H5SM_TABLE_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
         /*
-         * Debug shared message master table.
-         */
+        * Debug shared message master table.
+        */
 
         status = H5SM_table_debug(f, addr, stdout, 0, VCOL, (unsigned) UFAIL, (unsigned) UFAIL);
 
-    } else if(!HDmemcmp(sig, H5SM_LIST_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+    }
+    else if(!HDmemcmp(sig, H5SM_LIST_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
         /*
-         * Debug shared message list index.
-         */
+        * Debug shared message list index.
+        */
 
         /* Check for enough valid parameters */
         if(extra == 0) {
@@ -577,10 +589,11 @@ main(int argc, char *argv[])
 
         status = H5SM_list_debug(f, addr, stdout, 0, VCOL, (haddr_t)extra);
 
-    } else if(!HDmemcmp(sig, H5EA_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+    }
+    else if(!HDmemcmp(sig, H5EA_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
         /*
-         * Debug an extensible aray header.
-         */
+        * Debug an extensible aray header.
+        */
         const H5EA_class_t *cls = get_H5EA_class(sig);
         HDassert(cls);
 
@@ -594,10 +607,11 @@ main(int argc, char *argv[])
 
         status = H5EA__hdr_debug(f, addr, stdout, 0, VCOL, cls, extra);
 
-    } else if(!HDmemcmp(sig, H5EA_IBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+    }
+    else if(!HDmemcmp(sig, H5EA_IBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
         /*
-         * Debug an extensible aray index block.
-         */
+        * Debug an extensible aray index block.
+        */
         const H5EA_class_t *cls = get_H5EA_class(sig);
         HDassert(cls);
 
@@ -611,10 +625,11 @@ main(int argc, char *argv[])
 
         status = H5EA__iblock_debug(f, addr, stdout, 0, VCOL, cls, extra, extra2);
 
-    } else if(!HDmemcmp(sig, H5EA_SBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+    }
+    else if(!HDmemcmp(sig, H5EA_SBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
         /*
-         * Debug an extensible aray super block.
-         */
+        * Debug an extensible aray super block.
+        */
         const H5EA_class_t *cls = get_H5EA_class(sig);
         HDassert(cls);
 
@@ -628,10 +643,11 @@ main(int argc, char *argv[])
 
         status = H5EA__sblock_debug(f, addr, stdout, 0, VCOL, cls, extra, (unsigned)extra2, extra3);
 
-    } else if(!HDmemcmp(sig, H5EA_DBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+    }
+    else if(!HDmemcmp(sig, H5EA_DBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
         /*
-         * Debug an extensible aray data block.
-         */
+        * Debug an extensible aray data block.
+        */
         const H5EA_class_t *cls = get_H5EA_class(sig);
         HDassert(cls);
 
@@ -645,10 +661,11 @@ main(int argc, char *argv[])
 
         status = H5EA__dblock_debug(f, addr, stdout, 0, VCOL, cls, extra, (size_t)extra2, extra3);
 
-    } else if(!HDmemcmp(sig, H5FA_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+    }
+    else if(!HDmemcmp(sig, H5FA_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
         /*
-         * Debug a fixed array header.
-         */
+        * Debug a fixed array header.
+        */
         const H5FA_class_t *cls = get_H5FA_class(sig);
         HDassert(cls);
 
@@ -662,10 +679,11 @@ main(int argc, char *argv[])
 
         status = H5FA__hdr_debug(f, addr, stdout, 0, VCOL, cls, extra);
 
-    } else if(!HDmemcmp(sig, H5FA_DBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+    }
+    else if(!HDmemcmp(sig, H5FA_DBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
         /*
-         * Debug a fixed array data block.
-         */
+        * Debug a fixed array data block.
+        */
         const H5FA_class_t *cls = get_H5FA_class(sig);
         HDassert(cls);
 
@@ -679,33 +697,37 @@ main(int argc, char *argv[])
 
         status = H5FA__dblock_debug(f, addr, stdout, 0, VCOL, cls, extra, extra2);
 
-    } else if(!HDmemcmp(sig, H5O_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+    }
+    else if(!HDmemcmp(sig, H5O_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
         /*
-         * Debug v2 object header (which have signatures).
-         */
+        * Debug v2 object header (which have signatures).
+        */
 
         status = H5O_debug(f, addr, stdout, 0, VCOL);
 
-    } else if(sig[0] == H5O_VERSION_1) {
+    }
+    else if(sig[0] == H5O_VERSION_1) {
         /*
-         * This could be a v1 object header.  Since they don't have a signature
-         * it's a somewhat "ify" detection.
-         */
+        * This could be a v1 object header.  Since they don't have a signature
+        * it's a somewhat "ify" detection.
+        */
         status = H5O_debug(f, addr, stdout, 0, VCOL);
 
-    } else {
+    }
+    else {
         /*
-         * Got some other unrecognized signature.
-         */
-        printf("%-*s ", VCOL, "Signature:");
+        * Got some other unrecognized signature.
+        */
+        HDprintf("%-*s ", VCOL, "Signature:");
         for (u = 0; u < sizeof(sig); u++) {
             if (sig[u] > ' ' && sig[u] <= '~' && '\\' != sig[u])
                 HDputchar(sig[u]);
             else if ('\\' == sig[u]) {
                 HDputchar('\\');
                 HDputchar('\\');
-            } else
-                printf("\\%03o", sig[u]);
+            }
+            else
+                HDprintf("\\%03o", sig[u]);
         }
         HDputchar('\n');
 
diff --git a/tools/src/misc/h5mkgrp.c b/tools/src/misc/h5mkgrp.c
index b7ff73c..feb60d4 100644
--- a/tools/src/misc/h5mkgrp.c
+++ b/tools/src/misc/h5mkgrp.c
@@ -251,7 +251,7 @@ main(int argc, const char *argv[])
 
         /* Display some output if requested */
         if(params.verbose)
-            printf("%s: Creating groups with latest version of the format\n", h5tools_getprogname());
+            HDprintf("%s: Creating groups with latest version of the format\n", h5tools_getprogname());
     } /* end if */
 
     /* Attempt to open an existing HDF5 file first */
@@ -284,7 +284,7 @@ main(int argc, const char *argv[])
 
         /* Display some output if requested */
         if(params.verbose)
-            printf("%s: Creating parent groups\n", h5tools_getprogname());
+            HDprintf("%s: Creating parent groups\n", h5tools_getprogname());
     } /* end if */
 
     /* Loop over creating requested groups */
@@ -305,7 +305,7 @@ main(int argc, const char *argv[])
 
         /* Display some output if requested */
         if(params.verbose)
-            printf("%s: created group '%s'\n", h5tools_getprogname(), params.groups[curr_group]);
+            HDprintf("%s: created group '%s'\n", h5tools_getprogname(), params.groups[curr_group]);
     } /* end for */
 
     /* Close link creation property list */
diff --git a/tools/src/misc/h5repart.c b/tools/src/misc/h5repart.c
index 2f4d93e..d516fa0 100644
--- a/tools/src/misc/h5repart.c
+++ b/tools/src/misc/h5repart.c
@@ -15,19 +15,19 @@
  * Programmer:  Robb Matzke <matzke@llnl.gov>
  *              Wednesday, May 13, 1998
  *
- * Purpose:	Repartitions a file family.  This program can be used to
- *		split a single file into a family of files, join a family of
- *		files into a single file, or copy one family to another while
- *		changing the size of the family members.  It can also be used
- *		to copy a single file to a single file with holes.
+ * Purpose:    Repartitions a file family.  This program can be used to
+ *        split a single file into a family of files, join a family of
+ *        files into a single file, or copy one family to another while
+ *        changing the size of the family members.  It can also be used
+ *        to copy a single file to a single file with holes.
  */
 
 /* See H5private.h for how to include system headers */
 #include "hdf5.h"
 #include "H5private.h"
 
-#define NAMELEN	4096
-#define GB	*1024*1024*1024
+#define NAMELEN    4096
+#define GB    *1024*1024*1024
 
 /* Make these 2 private properties(defined in H5Fprivate.h) available to h5repart.
  * The first one updates the member file size in the superblock.  The second one
@@ -36,15 +36,15 @@
 #define H5F_ACS_FAMILY_NEWSIZE_NAME            "family_newsize"
 #define H5F_ACS_FAMILY_TO_SINGLE_NAME          "family_to_single"
 
-
+
 /*-------------------------------------------------------------------------
- * Function:	usage
+ * Function:    usage
  *
- * Purpose:	Prints a usage message.
+ * Purpose:    Prints a usage message.
  *
- * Return:	void
+ * Return:    void
  *
- * Programmer:	Robb Matzke
+ * Programmer:    Robb Matzke
  *              Wednesday, May 13, 1998
  *
  * Modifications:
@@ -54,98 +54,99 @@
 static void
 usage (const char *progname)
 {
-    fprintf(stderr, "usage: %s [-v] [-V] [-[b|m] N[g|m|k]] [-family_to_sec2|-family_to_single] SRC DST\n",
-	    progname);
-    fprintf(stderr, "   -v     Produce verbose output\n");
-    fprintf(stderr, "   -V     Print a version number and exit\n");
-    fprintf(stderr, "   -b N   The I/O block size, defaults to 1kB\n");
-    fprintf(stderr, "   -m N   The destination member size or 1GB\n");
-    fprintf(stderr, "   -family_to_sec2   Deprecated version of -family_to_single (below)\n");
-    fprintf(stderr, "   -family_to_single   Change file driver from family to the default single-file VFD (windows or sec2)\n");
-    fprintf(stderr, "   SRC    The name of the source file\n");
-    fprintf(stderr, "   DST	The name of the destination files\n");
-    fprintf(stderr, "Sizes may be suffixed with `g' for GB, `m' for MB or "
-	    "`k' for kB.\n");
-    fprintf(stderr, "File family names include an integer printf "
-	    "format such as `%%d'\n");
-    exit (EXIT_FAILURE);
+    HDfprintf(stderr, "usage: %s [-v] [-V] [-[b|m] N[g|m|k]] [-family_to_sec2|-family_to_single] SRC DST\n",
+        progname);
+    HDfprintf(stderr, "   -v     Produce verbose output\n");
+    HDfprintf(stderr, "   -V     Print a version number and exit\n");
+    HDfprintf(stderr, "   -b N   The I/O block size, defaults to 1kB\n");
+    HDfprintf(stderr, "   -m N   The destination member size or 1GB\n");
+    HDfprintf(stderr, "   -family_to_sec2   Deprecated version of -family_to_single (below)\n");
+    HDfprintf(stderr, "   -family_to_single   Change file driver from family to the default single-file VFD (windows or sec2)\n");
+    HDfprintf(stderr, "   SRC    The name of the source file\n");
+    HDfprintf(stderr, "   DST    The name of the destination files\n");
+    HDfprintf(stderr, "Sizes may be suffixed with `g' for GB, `m' for MB or "
+        "`k' for kB.\n");
+    HDfprintf(stderr, "File family names include an integer printf "
+        "format such as `%%d'\n");
+    HDexit (EXIT_FAILURE);
 }
 
-
+
 /*-------------------------------------------------------------------------
- * Function:	get_size
+ * Function:    get_size
  *
- * Purpose:	Reads a size option of the form `-XNS' where `X' is any
- *		letter, `N' is a multi-character positive decimal number, and
- *		`S' is an optional suffix letter in the set [GgMmk].  The
- *		option may also be split among two arguments as: `-X NS'.
- *		The input value of ARGNO is the argument number for the
- *		switch in the ARGV vector and ARGC is the number of entries
- *		in that vector.
+ * Purpose:    Reads a size option of the form `-XNS' where `X' is any
+ *        letter, `N' is a multi-character positive decimal number, and
+ *        `S' is an optional suffix letter in the set [GgMmk].  The
+ *        option may also be split among two arguments as: `-X NS'.
+ *        The input value of ARGNO is the argument number for the
+ *        switch in the ARGV vector and ARGC is the number of entries
+ *        in that vector.
  *
- * Return:	Success:	The value N multiplied according to the
- *				suffix S.  On return ARGNO will be the number
- *				of the next argument to process.
+ * Return:    Success:    The value N multiplied according to the
+ *                suffix S.  On return ARGNO will be the number
+ *                of the next argument to process.
  *
- *		Failure:	Calls usage() which exits with a non-zero
- *				status.
+ *        Failure:    Calls usage() which exits with a non-zero
+ *                status.
  *
- * Programmer:	Robb Matzke
+ * Programmer:    Robb Matzke
  *              Wednesday, May 13, 1998
- *
- * Modifications:
- *
  *-------------------------------------------------------------------------
  */
 static off_t
 get_size (const char *progname, int *argno, int argc, char *argv[])
 {
-    off_t	retval=-1;
-    char	*suffix;
+    off_t    retval=-1;
+    char    *suffix;
 
     if (isdigit ((int)(argv[*argno][2]))) {
-	retval = strtol (argv[*argno]+2, &suffix, 10);
-	(*argno)++;
-    } else if (argv[*argno][2] || *argno+1>=argc) {
-	usage (progname);
-    } else {
-	retval = strtol (argv[*argno+1], &suffix, 0);
-	if (suffix==argv[*argno+1]) usage (progname);
-	*argno += 2;
+        retval = HDstrtol(argv[*argno]+2, &suffix, 10);
+        (*argno)++;
+    }
+    else if (argv[*argno][2] || *argno+1>=argc) {
+        usage (progname);
+    }
+    else {
+        retval = HDstrtol(argv[*argno+1], &suffix, 0);
+        if (suffix == argv[*argno+1])
+            usage (progname);
+        *argno += 2;
     }
     if (suffix && suffix[0] && !suffix[1]) {
-	switch (*suffix) {
-	case 'G':
-	case 'g':
-	    retval *= 1024 * 1024 * 1024;
-	    break;
-	case 'M':
-	case 'm':
-	    retval *= 1024 * 1024;
-	    break;
-	case 'k':
-	    retval *= 1024;
-	    break;
-	default:
-	    usage (progname);
-	}
-    } else if (suffix && suffix[0]) {
-	usage (progname);
+        switch (*suffix) {
+        case 'G':
+        case 'g':
+            retval *= 1024 * 1024 * 1024;
+            break;
+        case 'M':
+        case 'm':
+            retval *= 1024 * 1024;
+            break;
+        case 'k':
+            retval *= 1024;
+            break;
+        default:
+            usage(progname);
+        }
+    }
+    else if (suffix && suffix[0]) {
+        usage (progname);
     }
     return retval;
 }
 
-
+
 /*-------------------------------------------------------------------------
- * Function:	main
+ * Function:    main
  *
- * Purpose:	Split an hdf5 file
+ * Purpose:    Split an hdf5 file
  *
- * Return:	Success:
+ * Return:    Success:
  *
- *		Failure:
+ *        Failure:
  *
- * Programmer:	Robb Matzke
+ * Programmer:    Robb Matzke
  *              Wednesday, May 13, 1998
  *
  * Modifications:
@@ -155,36 +156,36 @@ get_size (const char *progname, int *argno, int argc, char *argv[])
 int
 main (int argc, char *argv[])
 {
-    const char	*prog_name;		/*program name			*/
-    size_t	blk_size=1024;		/*size of each I/O block	*/
-    char	*buf=NULL;		/*I/O block buffer		*/
-    size_t	n, i;			/*counters			*/
-    ssize_t	nio;			/*I/O return value		*/
-    int		argno=1;		/*program argument number	*/
-    int		src, dst=-1;		/*source & destination files	*/
-    int		need_seek=FALSE;	/*destination needs to seek?	*/
-    int		need_write;		/*data needs to be written?	*/
-    h5_stat_t sb;                       /*temporary file stat buffer	*/
-
-    int		verbose=FALSE;		/*display file names?		*/
-
-    const char	*src_gen_name;  /*general source name		*/
-    char	*src_name=NULL;	    /*source member name		*/
-
-    int		src_is_family;		/*is source name a family name?	*/
-    int		src_membno=0;		/*source member number		*/
-
-    const char	*dst_gen_name;	/*general destination name	*/
-    char	*dst_name=NULL;	    /*destination member name	*/
-    int		dst_is_family;		/*is dst name a family name?	*/
-    int		dst_membno=0;		/*destination member number	*/
-
-    off_t	left_overs=0;		/*amount of zeros left over	*/
-    off_t	src_offset=0;		/*offset in source member	*/
-    off_t	dst_offset=0;		/*offset in destination member	*/
-    off_t	src_size;           /*source logical member size	*/
-    off_t	src_act_size;		/*source actual member size	*/
-    off_t	dst_size=1 GB;		/*destination logical memb size	*/
+    const char    *prog_name;        /*program name            */
+    size_t    blk_size=1024;        /*size of each I/O block    */
+    char    *buf=NULL;        /*I/O block buffer        */
+    size_t    n, i;            /*counters            */
+    ssize_t    nio;            /*I/O return value        */
+    int        argno=1;        /*program argument number    */
+    int        src, dst=-1;        /*source & destination files    */
+    int        need_seek=FALSE;    /*destination needs to seek?    */
+    int        need_write;        /*data needs to be written?    */
+    h5_stat_t sb;                       /*temporary file stat buffer    */
+
+    int        verbose=FALSE;        /*display file names?        */
+
+    const char    *src_gen_name;  /*general source name        */
+    char    *src_name=NULL;        /*source member name        */
+
+    int        src_is_family;        /*is source name a family name?    */
+    int        src_membno=0;        /*source member number        */
+
+    const char    *dst_gen_name;    /*general destination name    */
+    char    *dst_name=NULL;        /*destination member name    */
+    int        dst_is_family;        /*is dst name a family name?    */
+    int        dst_membno=0;        /*destination member number    */
+
+    off_t    left_overs=0;        /*amount of zeros left over    */
+    off_t    src_offset=0;        /*offset in source member    */
+    off_t    dst_offset=0;        /*offset in destination member    */
+    off_t    src_size;           /*source logical member size    */
+    off_t    src_act_size;        /*source actual member size    */
+    off_t    dst_size=1 GB;        /*destination logical memb size    */
     hid_t       fapl;                   /*file access property list     */
     hid_t       file;
     hsize_t     hdsize;                 /*destination logical memb size */
@@ -193,48 +194,50 @@ main (int argc, char *argv[])
     /*
      * Get the program name from argv[0]. Use only the last component.
      */
-    if ((prog_name=strrchr (argv[0], '/'))) prog_name++;
-    else prog_name = argv[0];
+    if ((prog_name = HDstrrchr (argv[0], '/')))
+        prog_name++;
+    else
+        prog_name = argv[0];
 
     /*
      * Parse switches.
      */
-    while (argno<argc && '-'==argv[argno][0]) {
-        if (!strcmp (argv[argno], "-v")) {
+    while (argno < argc && '-' == argv[argno][0]) {
+        if (!HDstrcmp(argv[argno], "-v")) {
             verbose = TRUE;
             argno++;
-        } else if (!strcmp(argv[argno], "-V")) {
-            printf("This is %s version %u.%u release %u\n",
-                prog_name, H5_VERS_MAJOR, H5_VERS_MINOR, H5_VERS_RELEASE);
-            exit(EXIT_SUCCESS);
-        } else if (!strcmp (argv[argno], "-family_to_sec2")) {
+        } else if (!HDstrcmp(argv[argno], "-V")) {
+            HDprintf("This is %s version %u.%u release %u\n", prog_name, H5_VERS_MAJOR, H5_VERS_MINOR, H5_VERS_RELEASE);
+            HDexit(EXIT_SUCCESS);
+        } else if (!HDstrcmp(argv[argno], "-family_to_sec2")) {
             family_to_single = TRUE;
             argno++;
-        } else if (!strcmp (argv[argno], "-family_to_single")) {
+        } else if (!HDstrcmp(argv[argno], "-family_to_single")) {
             family_to_single = TRUE;
             argno++;
-        } else if ('b'==argv[argno][1]) {
-            blk_size = (size_t)get_size (prog_name, &argno, argc, argv);
-        } else if ('m'==argv[argno][1]) {
-            dst_size = get_size (prog_name, &argno, argc, argv);
+        } else if ('b' == argv[argno][1]) {
+            blk_size = (size_t) get_size(prog_name, &argno, argc, argv);
+        } else if ('m' == argv[argno][1]) {
+            dst_size = get_size(prog_name, &argno, argc, argv);
         } else {
-            usage (prog_name);
+            usage(prog_name);
         } /* end if */
     } /* end while */
 
     /* allocate names */
     if(NULL == (src_name = (char *)HDcalloc((size_t)NAMELEN, sizeof(char))))
-        exit(EXIT_FAILURE);
+        HDexit(EXIT_FAILURE);
     if(NULL == (dst_name = (char *)HDcalloc((size_t)NAMELEN, sizeof(char))))
-        exit(EXIT_FAILURE);
+        HDexit(EXIT_FAILURE);
 
     /*
      * Get the name for the source file and open the first member.  The size
      * of the first member determines the logical size of all the members.
      */
-    if (argno>=argc) usage (prog_name);
+    if (argno >= argc)
+        usage(prog_name);
     src_gen_name = argv[argno++];
-    sprintf (src_name, src_gen_name, src_membno);
+    HDsprintf(src_name, src_gen_name, src_membno);
     src_is_family = strcmp (src_name, src_gen_name);
 
     if ((src = HDopen(src_name, O_RDONLY)) < 0) {
@@ -242,157 +245,170 @@ main (int argc, char *argv[])
         HDexit(EXIT_FAILURE);
     }
 
-    if (HDfstat(src, &sb)<0) {
-        perror ("fstat");
-        exit (EXIT_FAILURE);
+    if (HDfstat(src, &sb) < 0) {
+        HDperror("fstat");
+        HDexit(EXIT_FAILURE);
     }
     src_size = src_act_size = sb.st_size;
-    if (verbose) fprintf (stderr, "< %s\n", src_name);
+    if (verbose)
+        HDfprintf(stderr, "< %s\n", src_name);
 
     /*
      * Get the name for the destination file and open the first member.
      */
-    if (argno>=argc) usage (prog_name);
+    if (argno>=argc)
+        usage (prog_name);
     dst_gen_name = argv[argno++];
-    sprintf (dst_name, dst_gen_name, dst_membno);
-    dst_is_family = strcmp (dst_name, dst_gen_name);
+    HDsprintf(dst_name, dst_gen_name, dst_membno);
+    dst_is_family = HDstrcmp(dst_name, dst_gen_name);
 
     if ((dst = HDopen(dst_name, O_RDWR|O_CREAT|O_TRUNC, H5_POSIX_CREATE_MODE_RW)) < 0) {
         HDperror(dst_name);
         HDexit(EXIT_FAILURE);
     }
-    if (verbose) fprintf (stderr, "> %s\n", dst_name);
+    if (verbose)
+        HDfprintf(stderr, "> %s\n", dst_name);
 
     /* No more arguments */
-    if (argno<argc) usage (prog_name);
+    if (argno < argc)
+        usage (prog_name);
 
     /* Now the real work, split the file */
     buf = (char *)HDmalloc(blk_size);
     while (src_offset<src_size) {
 
-	/* Read a block.  The amount to read is the minimum of:
-	 *    1. The I/O block size
-	 *    2. What's left to write in the destination member
-	 *    3. Left over zeros or what's left in the source member.
-	 */
-	n = blk_size;
-	if (dst_is_family) n = (size_t)MIN((off_t)n, dst_size-dst_offset);
-	if (left_overs) {
-	    n = (size_t)MIN ((off_t)n, left_overs);
-	    left_overs = left_overs - (off_t)n;
-	    need_write = FALSE;
-	} else if (src_offset<src_act_size) {
-	    n = (size_t)MIN ((off_t)n, src_act_size-src_offset);
-	    if ((nio=HDread (src, buf, n))<0) {
-		perror ("read");
-		exit (EXIT_FAILURE);
-	    } else if ((size_t)nio!=n) {
-		fprintf (stderr, "%s: short read\n", src_name);
-		exit (EXIT_FAILURE);
-	    }
-	    for (i=0; i<n; i++) {
-		if (buf[i]) break;
-	    }
-	    need_write = (i<n);
-	} else {
-	    n = 0;
-	    left_overs = src_size - src_act_size;
-	    need_write = FALSE;
-	}
-
-	/*
-	 * If the block contains non-zero data then write it to the
-	 * destination, otherwise just remember that we'll have to do a seek
-	 * later in the destination when we finally get non-zero data.
-	 */
-	if (need_write) {
-	    if (need_seek && HDlseek (dst, dst_offset, SEEK_SET)<0) {
-		perror ("HDlseek");
-		exit (EXIT_FAILURE);
-	    }
-	    if ((nio=HDwrite (dst, buf, n))<0) {
-		perror ("write");
-		exit (EXIT_FAILURE);
-	    } else if ((size_t)nio!=n) {
-		fprintf (stderr, "%s: short write\n", dst_name);
-		exit (EXIT_FAILURE);
-	    }
-	    need_seek = FALSE;
-	} else {
-	    need_seek = TRUE;
-	}
-
-	/*
-	 * Update the source offset and open the next source family member if
-	 * necessary.  The source stream ends at the first member which
-	 * cannot be opened because it doesn't exist.  At the end of the
-	 * source stream, update the destination offset and break out of the
-	 * loop.   The destination offset must be updated so we can fix
-	 * trailing holes.
-	 */
-	src_offset = src_offset + (off_t)n;
-	if (src_offset==src_act_size) {
-	    HDclose (src);
-	    if (!src_is_family) {
-                dst_offset = dst_offset + (off_t)n;
-		break;
-	    }
-	    sprintf (src_name, src_gen_name, ++src_membno);
-	    if ((src = HDopen(src_name, O_RDONLY)) < 0 && ENOENT == errno) {
-            dst_offset = dst_offset + (off_t)n;
-            break;
-	    } else if (src<0) {
-		perror (src_name);
-		exit (EXIT_FAILURE);
-	    }
-	    if (HDfstat (src, &sb)<0) {
-		perror ("fstat");
-		exit (EXIT_FAILURE);
-	    }
-	    src_act_size = sb.st_size;
-	    if (src_act_size>src_size) {
-		fprintf (stderr, "%s: member truncated to %lu bytes\n",
-			 src_name, (unsigned long)src_size);
-	    }
-	    src_offset = 0;
-	    if (verbose) fprintf (stderr, "< %s\n", src_name);
-	}
-
-	/*
-	 * Update the destination offset, opening a new member if one will be
-	 * needed. The first member is extended to the logical member size
-	 * but other members might be smaller if they end with a hole.
-	 */
-        dst_offset = dst_offset + (off_t)n;
-	if (dst_is_family && dst_offset==dst_size) {
-	    if (0==dst_membno) {
-		if (HDlseek (dst, dst_size-1, SEEK_SET)<0) {
-		    perror ("HDHDlseek");
-		    exit (EXIT_FAILURE);
-		}
-		if (HDread (dst, buf, 1)<0) {
-		    perror ("read");
-		    exit (EXIT_FAILURE);
-		}
-		if (HDlseek (dst, dst_size-1, SEEK_SET)<0) {
-		    perror ("HDlseek");
-		    exit (EXIT_FAILURE);
-		}
-		if (HDwrite (dst, buf, 1)<0) {
-		    perror ("write");
-		    exit (EXIT_FAILURE);
-		}
-	    }
-	    HDclose (dst);
-	    sprintf (dst_name, dst_gen_name, ++dst_membno);
-	    if ((dst = HDopen(dst_name, O_RDWR|O_CREAT|O_TRUNC, H5_POSIX_CREATE_MODE_RW)) < 0) {
-            HDperror(dst_name);
-            HDexit(EXIT_FAILURE);
-	    }
-	    dst_offset = 0;
-	    need_seek = FALSE;
-	    if (verbose) fprintf (stderr, "> %s\n", dst_name);
-	}
+    /* Read a block.  The amount to read is the minimum of:
+    *    1. The I/O block size
+    *    2. What's left to write in the destination member
+    *    3. Left over zeros or what's left in the source member.
+    */
+        n = blk_size;
+        if (dst_is_family)
+            n = (size_t)MIN((off_t)n, dst_size-dst_offset);
+        if (left_overs) {
+            n = (size_t)MIN((off_t)n, left_overs);
+            left_overs = left_overs - (off_t) n;
+            need_write = FALSE;
+        }
+        else if (src_offset < src_act_size) {
+            n = (size_t)MIN((off_t)n, src_act_size-src_offset);
+            if ((nio = HDread(src, buf, n)) < 0) {
+                HDperror("read");
+                HDexit(EXIT_FAILURE);
+            }
+            else if ((size_t) nio != n) {
+                HDfprintf(stderr, "%s: short read\n", src_name);
+                HDexit(EXIT_FAILURE);
+            }
+            for (i = 0; i < n; i++) {
+                if (buf[i])
+                    break;
+            }
+            need_write = (i < n);
+        }
+        else {
+            n = 0;
+            left_overs = src_size - src_act_size;
+            need_write = FALSE;
+        }
+
+    /*
+    * If the block contains non-zero data then write it to the
+    * destination, otherwise just remember that we'll have to do a seek
+    * later in the destination when we finally get non-zero data.
+    */
+        if (need_write) {
+            if (need_seek && HDlseek (dst, dst_offset, SEEK_SET) < 0) {
+                HDperror("HDlseek");
+                HDexit(EXIT_FAILURE);
+            }
+            if ((nio = HDwrite(dst, buf, n)) < 0) {
+                HDperror("write");
+                HDexit(EXIT_FAILURE);
+            }
+            else if ((size_t) nio != n) {
+                HDfprintf(stderr, "%s: short write\n", dst_name);
+                HDexit(EXIT_FAILURE);
+            }
+            need_seek = FALSE;
+        }
+        else {
+            need_seek = TRUE;
+        }
+
+    /*
+    * Update the source offset and open the next source family member if
+    * necessary.  The source stream ends at the first member which
+    * cannot be opened because it doesn't exist.  At the end of the
+    * source stream, update the destination offset and break out of the
+    * loop.   The destination offset must be updated so we can fix
+    * trailing holes.
+    */
+        src_offset = src_offset + (off_t) n;
+        if (src_offset == src_act_size) {
+            HDclose(src);
+            if (!src_is_family) {
+                dst_offset = dst_offset + (off_t) n;
+                break;
+            }
+            HDsprintf(src_name, src_gen_name, ++src_membno);
+            if ((src = HDopen(src_name, O_RDONLY)) < 0 && ENOENT == errno) {
+                dst_offset = dst_offset + (off_t) n;
+                break;
+            }
+            else if (src < 0) {
+                HDperror(src_name);
+                HDexit(EXIT_FAILURE);
+            }
+            if (HDfstat (src, &sb) < 0) {
+                HDperror("fstat");
+                HDexit(EXIT_FAILURE);
+            }
+            src_act_size = sb.st_size;
+            if (src_act_size > src_size) {
+                HDfprintf(stderr, "%s: member truncated to %lu bytes\n", src_name, (unsigned long) src_size);
+            }
+            src_offset = 0;
+            if (verbose)
+                HDfprintf(stderr, "< %s\n", src_name);
+        }
+
+    /*
+    * Update the destination offset, opening a new member if one will be
+    * needed. The first member is extended to the logical member size
+    * but other members might be smaller if they end with a hole.
+    */
+        dst_offset = dst_offset + (off_t) n;
+        if (dst_is_family && dst_offset == dst_size) {
+            if (0 == dst_membno) {
+                if (HDlseek (dst, dst_size-1, SEEK_SET) < 0) {
+                    HDperror("HDHDlseek");
+                    HDexit(EXIT_FAILURE);
+                }
+                if (HDread (dst, buf, 1) < 0) {
+                    HDperror("read");
+                    HDexit(EXIT_FAILURE);
+                }
+                if (HDlseek (dst, dst_size-1, SEEK_SET) < 0) {
+                    HDperror("HDlseek");
+                    HDexit(EXIT_FAILURE);
+                }
+                if (HDwrite (dst, buf, 1) < 0) {
+                    HDperror("write");
+                    HDexit(EXIT_FAILURE);
+                }
+            }
+            HDclose(dst);
+            HDsprintf(dst_name, dst_gen_name, ++dst_membno);
+            if ((dst = HDopen(dst_name, O_RDWR | O_CREAT | O_TRUNC, H5_POSIX_CREATE_MODE_RW)) < 0) {
+                HDperror(dst_name);
+                HDexit(EXIT_FAILURE);
+            }
+            dst_offset = 0;
+            need_seek = FALSE;
+            if (verbose)
+                HDfprintf(stderr, "> %s\n", dst_name);
+        }
     }
 
     /*
@@ -401,30 +417,30 @@ main (int argc, char *argv[])
      * family has been truncated.
      */
     if (need_seek) {
-	if (HDlseek (dst, dst_offset-1, SEEK_SET)<0) {
-	    perror ("HDlseek");
-	    exit (EXIT_FAILURE);
-	}
-	if (HDread (dst, buf, 1)<0) {
-	    perror ("read");
-	    exit (EXIT_FAILURE);
-	}
-	if (HDlseek (dst, dst_offset-1, SEEK_SET)<0) {
-	    perror ("HDlseek");
-	    exit (EXIT_FAILURE);
-	}
-	if (HDwrite (dst, buf, 1)<0) {
-	    perror ("write");
-	    exit (EXIT_FAILURE);
-	}
+        if (HDlseek (dst, dst_offset-1, SEEK_SET)<0) {
+            HDperror ("HDlseek");
+            HDexit (EXIT_FAILURE);
+        }
+        if (HDread (dst, buf, 1)<0) {
+            HDperror ("read");
+            HDexit (EXIT_FAILURE);
+        }
+        if (HDlseek (dst, dst_offset-1, SEEK_SET)<0) {
+            HDperror ("HDlseek");
+            HDexit (EXIT_FAILURE);
+        }
+        if (HDwrite (dst, buf, 1)<0) {
+            HDperror ("write");
+            HDexit (EXIT_FAILURE);
+        }
     }
     HDclose (dst);
 
     /* Modify family driver information saved in superblock through private property.
      * These private properties are for this tool only. */
-    if ((fapl=H5Pcreate(H5P_FILE_ACCESS))<0) {
-        perror ("H5Pcreate");
-        exit (EXIT_FAILURE);
+    if ((fapl=H5Pcreate(H5P_FILE_ACCESS)) < 0) {
+        HDperror ("H5Pcreate");
+        HDexit (EXIT_FAILURE);
     }
 
     if(family_to_single) {
@@ -433,23 +449,24 @@ main (int argc, char *argv[])
          * the library to ignore the family driver information saved in the superblock.
          */
         if(H5Pset(fapl, H5F_ACS_FAMILY_TO_SINGLE_NAME, &family_to_single) < 0) {
-            perror ("H5Pset");
-            exit (EXIT_FAILURE);
+            HDperror ("H5Pset");
+            HDexit (EXIT_FAILURE);
         }
-    } else {
+    }
+    else {
         /* Modify family size saved in superblock through private property. It signals
          * library to save the new member size(specified in command line) in superblock.
          * This private property is for this tool only. */
         if(H5Pset_fapl_family(fapl, H5F_FAMILY_DEFAULT, H5P_DEFAULT) < 0) {
-            perror ("H5Pset_fapl_family");
-            exit (EXIT_FAILURE);
+            HDperror ("H5Pset_fapl_family");
+            HDexit (EXIT_FAILURE);
         }
 
         /* Set the property of the new member size as hsize_t */
         hdsize = (hsize_t)dst_size;
         if(H5Pset(fapl, H5F_ACS_FAMILY_NEWSIZE_NAME, &hdsize) < 0) {
-            perror ("H5Pset");
-            exit (EXIT_FAILURE);
+            HDperror ("H5Pset");
+            HDexit (EXIT_FAILURE);
         }
     }
 
@@ -465,16 +482,16 @@ main (int argc, char *argv[])
         file = H5Fopen(dst_gen_name, H5F_ACC_RDWR, fapl);
     } H5E_END_TRY;
 
-    if(file>=0) {
-        if(H5Fclose(file)<0) {
-            perror ("H5Fclose");
-            exit (EXIT_FAILURE);
+    if(file >= 0) {
+        if(H5Fclose(file) < 0) {
+            HDperror("H5Fclose");
+            HDexit(EXIT_FAILURE);
         } /* end if */
     } /* end if */
 
-    if(H5Pclose(fapl)<0) {
-        perror ("H5Pclose");
-        exit (EXIT_FAILURE);
+    if(H5Pclose(fapl) < 0) {
+        HDperror("H5Pclose");
+        HDexit(EXIT_FAILURE);
     } /* end if */
 
     /* Free resources and return */