Merge pull request #2203 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:1.10/master to 1.10/masterhdf5-1_10_6

* commit 'e0fa36bfe008c03365ce8ea94d705f8fdebccdf0': (166 commits)
  Update release date strings in README.txt and release_docs/RELEASE.txt
  Add release note about using ompio instead of romio when collective writes fail with OpenMPI.
  Fixed typos, grammatical errors, etc. Expanded entry for S3 and HDFS VFDs. Moved Mac 10.11 and 10.12 from Supported Platforms to More Platforms Tested.
  Add qualification to RELEASE.txt regarding performance improvements
  Standalone doesn't use h5test implementation.
  Add missing note
  Update COPYING file with new HDF5 license.
  Update bin/config.guess and config.sub to current version available from git.savannah.gnu.org.
  Fix include to correct memory calls - big-endian issue.
  Revert BLDLIBDIR value in junit.sh.in.
  Corrections to CMake functions
  Update version for HDF5 1.10.6 release. Remove autom4te.cache directory that shouldn't have been added.
  Remove duplicate instance
  Fix merge issue
  HDFFV-10979 - fix global name clash
  Correct clang search and java include
  Latest date first in RELEASE.txt
  Update RELEASE.txt with performance improvements and Steven Varga's bugfix.
  Update version numbers for shared lib files according to api compatibility report.
  Created hdf5_1_10_6 branch for HDF5 1.10.6 release preparation. Set version to 1.10.6-pre1. Switched default  maintainer mode to disabled and default build mode to production. Added files produced by autogen.sh to commit except for src/H5config.h.in~ and src/H5public.h~.
  ...

1 files changed, 76 insertions, 184 deletions

diff --git a/tools/test/h5import/CMakeTests.cmake b/tools/test/h5import/CMakeTests.cmake
index 7d76fba..22ab848 100644
--- a/tools/test/h5import/CMakeTests.cmake
+++ b/tools/test/h5import/CMakeTests.cmake
@@ -95,34 +95,39 @@
 ###           T H E   T E S T S  M A C R O S                               ###
 ##############################################################################
 ##############################################################################
+
+  if (NOT BUILD_SHARED_LIBS)
+    set (tgt_ext "")
+  else ()
+    set (tgt_ext "-shared")
+  endif ()
+
   macro (ADD_H5_TEST testname importfile conffile testfile)
     # If using memchecker skip macro based tests
     if (HDF5_ENABLE_USING_MEMCHECKER)
-      add_test (NAME H5IMPORT-${testname} COMMAND $<TARGET_FILE:h5import> ${importfile} -c ${conffile} -o ${testfile})
-      if (NOT "${last_test}" STREQUAL "")
-        set_tests_properties (H5IMPORT-${testname} PROPERTIES DEPENDS H5IMPORT-h5importtest)
-      endif ()
+      add_test (NAME H5IMPORT-${testname} COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:h5import${tgt_ext}> ${importfile} -c ${conffile} -o ${testfile})
+      set_tests_properties (H5IMPORT-${testname} PROPERTIES
+          FIXTURES_REQUIRED set_h5importtest
+      )
     else ()
       add_test (
           NAME H5IMPORT-${testname}-clear-objects
-          COMMAND    ${CMAKE_COMMAND}
-              -E remove
-              ${testfile}
-              ${testfile}.new
-              ${testfile}.new.err
-              ${testfile}.out
-              ${testfile}.out.err
-              ${testfile}
+          COMMAND ${CMAKE_COMMAND} -E remove ${testfile}
+      )
+      set_tests_properties (H5IMPORT-${testname}-clear-objects PROPERTIES
+          FIXTURES_REQUIRED set_h5importtest
       )
-      set_tests_properties (H5IMPORT-${testname}-clear-objects PROPERTIES DEPENDS H5IMPORT-h5importtest)
 
-      add_test (NAME H5IMPORT-${testname} COMMAND $<TARGET_FILE:h5import> ${importfile} -c ${conffile} -o ${testfile})
-      set_tests_properties (H5IMPORT-${testname} PROPERTIES DEPENDS H5IMPORT-${testname}-clear-objects)
+      add_test (NAME H5IMPORT-${testname} COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:h5import${tgt_ext}> ${importfile} -c ${conffile} -o ${testfile})
+      set_tests_properties (H5IMPORT-${testname} PROPERTIES
+          DEPENDS H5IMPORT-${testname}-clear-objects
+      )
 
       add_test (
           NAME H5IMPORT-${testname}-H5DMP
           COMMAND "${CMAKE_COMMAND}"
-              -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
+              -D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}"
+              -D "TEST_PROGRAM=$<TARGET_FILE:h5dump${tgt_ext}>"
               -D "TEST_ARGS:STRING=${testfile}"
               -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
               -D "TEST_OUTPUT=${testfile}.new"
@@ -131,11 +136,14 @@
               -D "TEST_SKIP_COMPARE=TRUE"
               -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
       )
-      set_tests_properties (H5IMPORT-${testname}-H5DMP PROPERTIES DEPENDS H5IMPORT-${testname})
+      set_tests_properties (H5IMPORT-${testname}-H5DMP PROPERTIES
+          DEPENDS H5IMPORT-${testname}
+      )
       add_test (
           NAME H5IMPORT-${testname}-H5DMP_CMP
           COMMAND "${CMAKE_COMMAND}"
-              -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
+              -D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}"
+              -D "TEST_PROGRAM=$<TARGET_FILE:h5dump${tgt_ext}>"
               -D "TEST_ARGS:STRING=testfiles/${testfile}"
               -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
               -D "TEST_OUTPUT=${testfile}.out"
@@ -144,7 +152,9 @@
               -D "TEST_REFERENCE=${testfile}.new"
               -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
       )
-      set_tests_properties (H5IMPORT-${testname}-H5DMP_CMP PROPERTIES DEPENDS H5IMPORT-${testname}-H5DMP)
+      set_tests_properties (H5IMPORT-${testname}-H5DMP_CMP PROPERTIES
+          DEPENDS H5IMPORT-${testname}-H5DMP
+      )
     endif ()
   endmacro ()
 
@@ -153,24 +163,20 @@
     if (NOT HDF5_ENABLE_USING_MEMCHECKER)
       add_test (
           NAME H5IMPORT-DUMP-${testname}-clear-objects
-          COMMAND    ${CMAKE_COMMAND}
-              -E remove
+          COMMAND ${CMAKE_COMMAND} -E remove
               d${testfile}
               d${testfile}.bin
-              d${testfile}.dmp
-              d${testfile}.dmp.err
-              d${testfile}.imp
-              d${testfile}.imp.err
-              d${testfile}.dff
-              d${testfile}.dff.err
       )
-      set_tests_properties (H5IMPORT-DUMP-${testname}-clear-objects PROPERTIES DEPENDS H5IMPORT-h5importtest)
+      set_tests_properties (H5IMPORT-DUMP-${testname}-clear-objects PROPERTIES
+          DEPENDS H5IMPORT-${testname}-H5DMP_CMP
+      )
 
       if ("${ARGN}" STREQUAL "BINARY")
         add_test (
             NAME H5IMPORT-DUMP-${testname}-H5DMP
             COMMAND "${CMAKE_COMMAND}"
-                -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
+                -D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}"
+                -D "TEST_PROGRAM=$<TARGET_FILE:h5dump${tgt_ext}>"
                 -D "TEST_ARGS:STRING=-p;-d;${datasetname};-o;d${testfile}.bin;-b;NATIVE;testfiles/${testfile}"
                 -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
                 -D "TEST_OUTPUT=d${testfile}.dmp"
@@ -182,7 +188,8 @@
         add_test (
             NAME H5IMPORT-DUMP-${testname}-H5DMP
             COMMAND "${CMAKE_COMMAND}"
-                -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
+                -D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}"
+                -D "TEST_PROGRAM=$<TARGET_FILE:h5dump${tgt_ext}>"
                 -D "TEST_ARGS:STRING=-p;-d;${datasetname};-o;d${testfile}.bin;-y;--width=1;testfiles/${testfile}"
                 -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
                 -D "TEST_OUTPUT=d${testfile}.dmp"
@@ -191,12 +198,15 @@
                 -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
         )
       endif ()
-      set_tests_properties (H5IMPORT-DUMP-${testname}-H5DMP PROPERTIES DEPENDS "H5IMPORT-DUMP-${testname}-clear-objects")
+      set_tests_properties (H5IMPORT-DUMP-${testname}-H5DMP PROPERTIES
+          DEPENDS "H5IMPORT-DUMP-${testname}-clear-objects"
+      )
 
       add_test (
           NAME H5IMPORT-DUMP-${testname}
           COMMAND "${CMAKE_COMMAND}"
-              -D "TEST_PROGRAM=$<TARGET_FILE:h5import>"
+              -D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}"
+              -D "TEST_PROGRAM=$<TARGET_FILE:h5import${tgt_ext}>"
               -D "TEST_ARGS:STRING=d${testfile}.bin;-c;d${testfile}.dmp;-o;d${testfile}"
               -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
               -D "TEST_OUTPUT=d${testfile}.imp"
@@ -204,12 +214,15 @@
               -D "TEST_SKIP_COMPARE=TRUE"
               -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
       )
-      set_tests_properties (H5IMPORT-DUMP-${testname} PROPERTIES DEPENDS "H5IMPORT-DUMP-${testname}-H5DMP")
+      set_tests_properties (H5IMPORT-DUMP-${testname} PROPERTIES
+          DEPENDS "H5IMPORT-DUMP-${testname}-H5DMP"
+      )
 
       add_test (
           NAME H5IMPORT-DUMP-${testname}-H5DFF
           COMMAND "${CMAKE_COMMAND}"
-              -D "TEST_PROGRAM=$<TARGET_FILE:h5diff>"
+              -D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}"
+              -D "TEST_PROGRAM=$<TARGET_FILE:h5diff${tgt_ext}>"
               -D "TEST_ARGS:STRING=-r;d${testfile};testfiles/${testfile};${datasetname};${datasetname}"
               -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
               -D "TEST_OUTPUT=d${testfile}.dff"
@@ -218,7 +231,9 @@
               -D "TEST_REFERENCE=testfiles/d${testfile}.txt"
               -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
       )
-      set_tests_properties (H5IMPORT-DUMP-${testname}-H5DFF PROPERTIES DEPENDS "H5IMPORT-DUMP-${testname}")
+      set_tests_properties (H5IMPORT-DUMP-${testname}-H5DFF PROPERTIES
+          DEPENDS "H5IMPORT-DUMP-${testname}"
+      )
     endif ()
   endmacro ()
 
@@ -227,23 +242,19 @@
     if (NOT HDF5_ENABLE_USING_MEMCHECKER)
       add_test (
           NAME H5IMPORT_SUB-DUMP-${testname}-clear-objects
-          COMMAND    ${CMAKE_COMMAND}
-              -E remove
-              d-${testname}.dmp
-              d-${testname}.dmp.err
+          COMMAND ${CMAKE_COMMAND} -E remove
               d-${testname}.h5
-              ${testname}.dmp
-              ${testname}.dmp.err
-              ${testname}.imp
-              ${testname}.imp.err
               ${testname}.bin
       )
-      set_tests_properties (H5IMPORT_SUB-DUMP-${testname}-clear-objects PROPERTIES DEPENDS H5IMPORT-h5importtest)
+      set_tests_properties (H5IMPORT_SUB-DUMP-${testname}-clear-objects PROPERTIES
+          FIXTURES_REQUIRED set_h5importtest
+      )
 
       add_test (
           NAME H5IMPORT_SUB-DUMP-${testname}-H5DMP
           COMMAND "${CMAKE_COMMAND}"
-              -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
+              -D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}"
+              -D "TEST_PROGRAM=$<TARGET_FILE:h5dump${tgt_ext}>"
               -D "TEST_ARGS:STRING=-p;-d;${datasetname};${ARGN};-o;${testname}.bin;-b;NATIVE;testfiles/${testfile}"
               -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
               -D "TEST_OUTPUT=${testname}.dmp"
@@ -251,12 +262,15 @@
               -D "TEST_SKIP_COMPARE=TRUE"
               -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
       )
-      set_tests_properties (H5IMPORT_SUB-DUMP-${testname}-H5DMP PROPERTIES DEPENDS "H5IMPORT_SUB-DUMP-${testname}-clear-objects")
+      set_tests_properties (H5IMPORT_SUB-DUMP-${testname}-H5DMP PROPERTIES
+          DEPENDS "H5IMPORT_SUB-DUMP-${testname}-clear-objects"
+      )
 
       add_test (
           NAME H5IMPORT_SUB-DUMP-${testname}-H5IMP
           COMMAND "${CMAKE_COMMAND}"
-              -D "TEST_PROGRAM=$<TARGET_FILE:h5import>"
+              -D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}"
+              -D "TEST_PROGRAM=$<TARGET_FILE:h5import${tgt_ext}>"
               -D "TEST_ARGS:STRING=${testname}.bin;-c;${testname}.dmp;-o;d-${testname}.h5"
               -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
               -D "TEST_OUTPUT=${testname}.imp"
@@ -264,11 +278,14 @@
               -D "TEST_SKIP_COMPARE=TRUE"
               -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
       )
-      set_tests_properties (H5IMPORT_SUB-DUMP-${testname}-H5IMP PROPERTIES DEPENDS "H5IMPORT_SUB-DUMP-${testname}-H5DMP")
+      set_tests_properties (H5IMPORT_SUB-DUMP-${testname}-H5IMP PROPERTIES
+          DEPENDS "H5IMPORT_SUB-DUMP-${testname}-H5DMP"
+      )
       add_test (
           NAME H5IMPORT_SUB-DUMP-${testname}-CMP
           COMMAND "${CMAKE_COMMAND}"
-              -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
+              -D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}"
+              -D "TEST_PROGRAM=$<TARGET_FILE:h5dump${tgt_ext}>"
               -D "TEST_ARGS:STRING=-p;d-${testname}.h5"
               -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
               -D "TEST_OUTPUT=d-${testname}.dmp"
@@ -276,7 +293,9 @@
               -D "TEST_REFERENCE=testfiles/${testname}.ddl"
               -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
       )
-      set_tests_properties (H5IMPORT_SUB-DUMP-${testname}-CMP PROPERTIES DEPENDS "H5IMPORT_SUB-DUMP-${testname}-H5IMP")
+      set_tests_properties (H5IMPORT_SUB-DUMP-${testname}-CMP PROPERTIES
+         DEPENDS "H5IMPORT_SUB-DUMP-${testname}-H5IMP"
+      )
     endif ()
   endmacro ()
 
@@ -307,8 +326,7 @@
     # Remove any output file left over from previous test run
     add_test (
         NAME H5IMPORT-clear-objects
-        COMMAND    ${CMAKE_COMMAND}
-            -E remove
+        COMMAND ${CMAKE_COMMAND} -E remove
             binfp64.bin
             binin8.bin
             binin8w.bin
@@ -317,164 +335,40 @@
             binuin16.bin
             binuin32.bin
             txtin32.h5
-            txtin32.h5.new
-            txtin32.h5.new.err
-            txtin32.h5.out
-            txtin32.h5.out.err
             txtin16.h5
-            txtin16.h5.new
-            txtin16.h5.new.err
-            txtin16.h5.out
-            txtin16.h5.out.err
             txtin8.h5
-            txtin8.h5.new
-            txtin8.h5.new.err
-            txtin8.h5.out
-            txtin8.h5.out.err
             txtuin16.h5
-            txtuin16.h5.new
-            txtuin16.h5.new.err
-            txtuin16.h5.out
-            txtuin16.h5.out.err
             txtuin32.h5
-            txtuin32.h5.new
-            txtuin32.h5.new.err
-            txtuin32.h5.out
-            txtuin32.h5.out.err
             txtfp32.h5
-            txtfp32.h5.new
-            txtfp32.h5.new.err
-            txtfp32.h5.out
-            txtfp32.h5.out.err
             txtfp64.h5
-            txtfp64.h5.new
-            txtfp64.h5.new.err
-            txtfp64.h5.out
-            txtfp64.h5.out.err
             binfp64.h5
-            binfp64.h5.new
-            binfp64.h5.new.err
-            binfp64.h5.out
-            binfp64.h5.out.err
             binin8.h5
-            binin8.h5.new
-            binin8.h5.new.err
-            binin8.h5.out
-            binin8.h5.out.err
             binin8w.h5
-            binin8w.h5.new
-            binin8w.h5.new.err
-            binin8w.h5.out
-            binin8w.h5.out.err
             binin16.h5
-            binin16.h5.new
-            binin16.h5.new.err
-            binin16.h5.out
-            binin16.h5.out.err
             binin32.h5
-            binin32.h5.new
-            binin32.h5.new.err
-            binin32.h5.out
-            binin32.h5.out.err
             binuin16.h5
-            binuin16.h5.new
-            binuin16.h5.new.err
-            binuin16.h5.out
-            binuin16.h5.out.err
             binuin32.h5
-            binuin32.h5.new
-            binuin32.h5.new.err
-            binuin32.h5.out
-            binuin32.h5.out.err
             txtstr.h5
-            txtstr.h5.new
-            txtstr.h5.new.err
-            txtstr.h5.out
-            txtstr.h5.out.err
             textpfe.h5
-            textpfe.h5.new
-            textpfe.h5.new.err
-            textpfe.h5.out
-            textpfe.h5.out.err
             dbinfp64.h5
             dbinfp64.h5.bin
-            dbinfp64.h5.imp
-            dbinfp64.h5.imp.err
-            dbinfp64.h5.dmp
-            dbinfp64.h5.dmp.err
-            dbinfp64.h5.dff
-            dbinfp64.h5.dff.err
             dbinin8.h5
             dbinin8.h5.bin
-            dbinin8.h5.imp
-            dbinin8.h5.imp.err
-            dbinin8.h5.dmp
-            dbinin8.h5.dmp.err
-            dbinin8.h5.dff
-            dbinin8.h5.dff.err
             dbinin8w.h5
             dbinin8w.h5.bin
-            dbinin8w.h5.imp
-            dbinin8w.h5.imp.err
-            dbinin8w.h5.dmp
-            dbinin8w.h5.dmp.err
-            dbinin8w.h5.dff
-            dbinin8w.h5.dff.err
             dbinin16.h5
             dbinin16.h5.bin
-            dbinin16.h5.imp
-            dbinin16.h5.imp.err
-            dbinin16.h5.dmp
-            dbinin16.h5.dmp.err
-            dbinin16.h5.dff
-            dbinin16.h5.dff.err
             dbinin32.h5
             dbinin32.h5.bin
-            dbinin32.h5.imp
-            dbinin32.h5.imp.err
-            dbinin32.h5.dmp
-            dbinin32.h5.dmp.err
-            dbinin32.h5.dff
-            dbinin32.h5.dff.err
             dbinuin16.h5
             dbinuin16.h5.bin
-            dbinuin16.h5.imp
-            dbinuin16.h5.imp.err
-            dbinuin16.h5.dmp
-            dbinuin16.h5.dmp.err
-            dbinuin16.h5.dff
-            dbinuin16.h5.dff.err
             dbinuin32.h5
             dbinuin32.h5.bin
-            dbinuin32.h5.imp
-            dbinuin32.h5.imp.err
-            dbinuin32.h5.dmp
-            dbinuin32.h5.dmp.err
-            dbinuin32.h5.dff
-            dbinuin32.h5.dff.err
             dtxtstr.h5
             dtxtstr.h5.bin
-            dtxtstr.h5.imp
-            dtxtstr.h5.imp.err
-            dtxtstr.h5.dmp
-            dtxtstr.h5.dmp.err
-            dtxtstr.h5.dff
-            dtxtstr.h5.dff.err
-            tall_fp32.dmp
-            tall_fp32.dmp.err
             tall_fp32.bin
-            tall_fp32.imp
-            tall_fp32.imp.err
-            d-tall_fp32.dmp
-            d-tall_fp32.dmp.err
             d-tall_fp32.h5
-            tall_i32.dmp
-            tall_i32.dmp.err
             tall_i32.bin
-            tall_i32.imp
-            tall_i32.imp.err
-            d-tall_i32.dmp
-            d-tall_i32.dmp.err
             d-tall_i32.h5
     )
     set (last_test "H5IMPORT-clear-objects")
@@ -482,8 +376,7 @@
 
   add_test (
       NAME H5IMPORT-h5importtest-clear-objects
-      COMMAND    ${CMAKE_COMMAND}
-          -E remove
+      COMMAND ${CMAKE_COMMAND} -E remove
           binfp64.bin
           binfp64.conf
           binin8.bin
@@ -499,13 +392,12 @@
           binuin32.bin
           binuin32.conf
   )
-  if (NOT "${last_test}" STREQUAL "")
-    set_tests_properties (H5IMPORT-h5importtest-clear-objects PROPERTIES DEPENDS ${last_test})
-  endif ()
-  set (last_test "H5IMPORT-clear-objects")
 
-  add_test (NAME H5IMPORT-h5importtest COMMAND $<TARGET_FILE:h5importtest>)
-  set_tests_properties (H5IMPORT-h5importtest PROPERTIES DEPENDS H5IMPORT-h5importtest-clear-objects)
+  add_test (NAME H5IMPORT-h5importtest COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:h5importtest>)
+  set_tests_properties (H5IMPORT-h5importtest PROPERTIES
+      FIXTURES_SETUP set_h5importtest
+      DEPENDS H5IMPORT-h5importtest-clear-objects
+  )
 
   # ----- TESTING "ASCII I32 rank 3 - Output BE " ;
   ADD_H5_TEST (ASCII_I32 testfiles/txtin32.txt testfiles/txtin32.conf txtin32.h5)