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| author | Dana Robinson <43805+derobins@users.noreply.github.com> | 2022-03-06 23:33:00 (GMT) |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2022-03-06 23:33:00 (GMT) |
| commit | 78375882485a99a81caa933928ed08d7a38ef88b (patch) | |
| tree | f18c41d7794d546b6562dd2aa36932c78f00a16a /tools/test | |
| parent | 7e176db164d1a6f944e703c612c4952b15d333f4 (diff) | |
| download | hdf5-78375882485a99a81caa933928ed08d7a38ef88b.zip hdf5-78375882485a99a81caa933928ed08d7a38ef88b.tar.gz hdf5-78375882485a99a81caa933928ed08d7a38ef88b.tar.bz2 | |
VFD SWMR: normalization with develop (#1472)
Much normalization with develop. Still needs tools changes wrt VFD plugins.
Diffstat (limited to 'tools/test')
53 files changed, 928 insertions, 612 deletions
diff --git a/tools/test/h5copy/CMakeTests.cmake b/tools/test/h5copy/CMakeTests.cmake index e9b36fe..154ca15 100644 --- a/tools/test/h5copy/CMakeTests.cmake +++ b/tools/test/h5copy/CMakeTests.cmake @@ -211,7 +211,7 @@ endmacro () # - # Similiar to ADD_H5_TEST macro. Compare to outputs from source & target + # Similar to ADD_H5_TEST macro. Compare to outputs from source & target # files instead of checking with h5ls. # macro (ADD_H5_CMP_TEST testname resultcode infile vparam sparam srcname dparam dstname) diff --git a/tools/test/h5copy/h5copygentest.c b/tools/test/h5copy/h5copygentest.c index 6898839..c1f8349 100644 --- a/tools/test/h5copy/h5copygentest.c +++ b/tools/test/h5copy/h5copygentest.c @@ -618,7 +618,7 @@ gen_region_ref(hid_t loc_id) goto out; } - /* create normal dataset which is refered */ + /* create normal dataset which is referred */ oid2 = H5Dcreate2(loc_id, REG_REF_DS2, H5T_STD_I8LE, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); if (oid2 < 0) { HDfprintf(stderr, "Error: %s %d> H5Dcreate2 failed.\n", __func__, __LINE__); diff --git a/tools/test/h5copy/testh5copy.sh.in b/tools/test/h5copy/testh5copy.sh.in index 79b6fd5..6349ef4 100644 --- a/tools/test/h5copy/testh5copy.sh.in +++ b/tools/test/h5copy/testh5copy.sh.in @@ -88,7 +88,7 @@ test -d $TESTDIR || mkdir $TESTDIR # RUNSERIAL is used. Check if it can return exit code from executalbe correctly. if [ -n "$RUNSERIAL_NOEXITCODE" ]; then - echo "***Warning*** Serial Exit Code is not passed back to shell corretly." + echo "***Warning*** Serial Exit Code is not passed back to shell correctly." echo "***Warning*** Exit code checking is skipped." h5haveexitcode=no fi diff --git a/tools/test/h5diff/CMakeTests.cmake b/tools/test/h5diff/CMakeTests.cmake index 4fcfa26..8e01605 100644 --- a/tools/test/h5diff/CMakeTests.cmake +++ b/tools/test/h5diff/CMakeTests.cmake @@ -1278,7 +1278,7 @@ ADD_H5_TEST (h5diff_208 0 -c ${FILE19} ${FILE20}) ADD_H5_TEST (h5diff_220 1 -c non_comparables1.h5 non_comparables2.h5 /g1) # comparable dataset with non-comparable attribute and other comparable attributes. -# Also test non-compatible attributes with different type, dimention, rank. +# Also test non-compatible attributes with different type, dimension, rank. # All the rest comparables should display differences. ADD_H5_TEST (h5diff_221 1 -c non_comparables1.h5 non_comparables2.h5 /g2) @@ -1438,7 +1438,7 @@ ADD_H5_TEST (h5diff_475 1 -v h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /ext_ # ############################################################################## -# # test for group diff recursivly +# # test for group diff recursively # ############################################################################## # root ADD_H5_TEST (h5diff_500 1 -v ${GRP_RECURSE_FILE1} ${GRP_RECURSE_FILE2} / /) diff --git a/tools/test/h5diff/h5diff_plugin.sh.in b/tools/test/h5diff/h5diff_plugin.sh.in index 0ab169a..28f723e 100644 --- a/tools/test/h5diff/h5diff_plugin.sh.in +++ b/tools/test/h5diff/h5diff_plugin.sh.in @@ -158,7 +158,7 @@ done # RUNSERIAL is used. Check if it can return exit code from executalbe correctly. if [ -n "$RUNSERIAL_NOEXITCODE" ]; then - echo "***Warning*** Serial Exit Code is not passed back to shell corretly." + echo "***Warning*** Serial Exit Code is not passed back to shell correctly." echo "***Warning*** Exit code checking is skipped." h5haveexitcode=no fi @@ -236,7 +236,7 @@ TOOLTEST() { # don't add exit code check in pmode, as it causes failure. (exit code # is from mpirun not tool) # if any problem occurs relate to an exit code, it will be caught in - # serial mode, so the test is fullfilled. + # serial mode, so the test is fulfilled. if test $h5haveexitcode = 'yes' -a -z "$pmode"; then echo "EXIT CODE: $EXIT_CODE" >> $actual fi @@ -327,7 +327,7 @@ TOOLTEST_ERR() { # don't add exit code check in pmode, as it causes failure. (exit code # is from mpirun not tool) # if any problem occurs relate to an exit code, it will be caught in - # serial mode, so the test is fullfilled. + # serial mode, so the test is fulfilled. if test $h5haveexitcode = 'yes' -a -z "$pmode"; then echo "EXIT CODE: $EXIT_CODE" >> $actual fi diff --git a/tools/test/h5diff/h5diffgentest.c b/tools/test/h5diff/h5diffgentest.c index 7cefeea..5e0f830 100644 --- a/tools/test/h5diff/h5diffgentest.c +++ b/tools/test/h5diff/h5diffgentest.c @@ -82,7 +82,7 @@ size_t H5TOOLS_MALLOCSIZE = (128 * 1024 * 1024); #define EXCLUDE_FILE3_2 "h5diff_exclude3-2.h5" /* compound type with multiple vlen string types */ #define COMP_VL_STRS_FILE "h5diff_comp_vl_strs.h5" -/* attribute compre with verbose level */ +/* attribute compare with verbose level */ #define ATTR_VERBOSE_LEVEL_FILE1 "h5diff_attr_v_level1.h5" #define ATTR_VERBOSE_LEVEL_FILE2 "h5diff_attr_v_level2.h5" /* file containing valid/invalid enum value mix */ @@ -358,10 +358,10 @@ test_basic(const char *fname1, const char *fname2, const char *fname3) */ { - double data1[3][2] = {{1.0F, 1.0F}, {1.00F, 1.000F}, {0.0F, 0.0F}}; - double data2[3][2] = {{0.0F, 1.1F}, {1.01F, 1.001F}, {0.0F, 1.0F}}; - double data3[3][2] = {{100.0F, 100.0F}, {100.00F, 100.000F}, {100.0F, 100.0F}}; - double data4[3][2] = {{105.0F, 120.0F}, {160.00F, 95.000F}, {80.0F, 40.0F}}; + double data1[3][2] = {{1.0, 1.0}, {1.00, 1.000}, {0.0, 0.0}}; + double data2[3][2] = {{0.0, 1.1}, {1.01, 1.001}, {0.0, 1.0}}; + double data3[3][2] = {{100.0, 100.0}, {100.00, 100.000}, {100.0, 100.0}}; + double data4[3][2] = {{105.0, 120.0}, {160.00, 95.000}, {80.0, 40.0}}; write_dset(gid1, 2, dims2, "dset1", H5T_NATIVE_DOUBLE, data1); write_dset(gid2, 2, dims2, "dset2", H5T_NATIVE_DOUBLE, data2); @@ -409,8 +409,8 @@ test_basic(const char *fname1, const char *fname2, const char *fname3) *------------------------------------------------------------------------- */ { - double data9[3][2] = {{100.0F, 100.0F}, {100.0F, 0.0F}, {0.0F, 100.0F}}; - double data10[3][2] = {{120.0F, 80.0F}, {0.0F, 100.0F}, {0.0F, 50.0F}}; + double data9[3][2] = {{100.0, 100.0}, {100.0, 0.0}, {0.0, 100.0}}; + double data10[3][2] = {{120.0, 80.0}, {0.0, 100.0}, {0.0, 50.0}}; write_dset(gid1, 2, dims2, "dset9", H5T_NATIVE_DOUBLE, data9); write_dset(gid1, 2, dims2, "dset10", H5T_NATIVE_DOUBLE, data10); @@ -464,18 +464,18 @@ test_basic(const char *fname1, const char *fname2, const char *fname3) float data16[6]; data15[0] = (float)HDsqrt(-1.0); - data15[1] = 1.0F; + data15[1] = 1.0; data15[2] = (float)HDsqrt(-1.0); - data15[3] = 1.0F; - data15[4] = 1.0F; - data15[5] = 1.0F; + data15[3] = 1.0; + data15[4] = 1.0; + data15[5] = 1.0; data16[0] = (float)HDsqrt(-1.0); data16[1] = (float)HDsqrt(-1.0); - data16[2] = 1.0F; - data16[3] = 1.0F; - data16[4] = 1.0F; - data16[5] = 1.0F; + data16[2] = 1.0; + data16[3] = 1.0; + data16[4] = 1.0; + data16[5] = 1.0; write_dset(gid1, 1, dims1, "fp15", H5T_NATIVE_FLOAT, data15); write_dset(gid1, 1, dims1, "fp16", H5T_NATIVE_FLOAT, data16); @@ -552,8 +552,8 @@ test_basic(const char *fname1, const char *fname2, const char *fname3) buf1[1].d = HDsqrt(-1.0); buf1[1].f = (float)HDsqrt(-1.0); - buf2[1].d = 0.0F; - buf2[1].f = 0.0F; + buf2[1].d = 0.0; + buf2[1].f = 0.0; type_size = sizeof(cmp1_t); tid = H5Tcreate(H5T_COMPOUND, type_size); @@ -581,13 +581,13 @@ test_basic(const char *fname1, const char *fname2, const char *fname3) int i; } cmp3_t; - double data2[6] = {0.0F, 0.0F, 0.0F, 0.0F, 0.0F, 0.0F}; + double data2[6] = {0.0, 0.0, 0.0, 0.0, 0.0, 0.0}; int data3[6] = {0, 0, 0, 0, 0, 0}; int data4[3][2] = {{0, 0}, {0, 0}, {0, 0}}; int data5[2][2] = {{0, 0}, {0, 0}}; unsigned int data6[3][2] = {{0, 0}, {0, 0}, {0, 0}}; - cmp1_t data7[1] = {{1.0f, 2}}; - cmp2_t data8[1] = {{1, 2.0f}}; + cmp1_t data7[1] = {{1.0, 2}}; + cmp2_t data8[1] = {{1, 2.0}}; hsize_t dims3[2] = {2, 2}; hsize_t dims4[1] = {1}; size_t type_size; @@ -787,10 +787,10 @@ test_datatypes(const char *fname) int buf3b[3][2] = {{1, 1}, {3, 4}, {5, 6}}; long buf4a[3][2] = {{1, 1}, {1, 1}, {1, 1}}; long buf4b[3][2] = {{1, 1}, {3, 4}, {5, 6}}; - float buf5a[3][2] = {{1.0F, 1.0F}, {1.0F, 1.0F}, {1.0F, 1.0F}}; - float buf5b[3][2] = {{1.0F, 1.0F}, {3.0F, 4.0F}, {5.0F, 6.0F}}; - double buf6a[3][2] = {{1.0F, 1.0F}, {1.0F, 1.0F}, {1.0F, 1.0F}}; - double buf6b[3][2] = {{1.0F, 1.0F}, {3.0F, 4.0F}, {5.0F, 6.0F}}; + float buf5a[3][2] = {{1.0, 1.0}, {1.0, 1.0}, {1.0, 1.0}}; + float buf5b[3][2] = {{1.0, 1.0}, {3.0, 4.0}, {5.0, 6.0}}; + double buf6a[3][2] = {{1.0, 1.0}, {1.0, 1.0}, {1.0, 1.0}}; + double buf6b[3][2] = {{1.0, 1.0}, {3.0, 4.0}, {5.0, 6.0}}; /*unsigned/signed test signed char -128 to 127 @@ -2904,7 +2904,7 @@ test_group_recurse2(void) * FILE 2-3 *------------------------------------------------------------------------*/ - /* crate target file */ + /* create target file */ fileid4 = H5Fcreate(GRP_RECURSE2_EXT3, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); /*----------------------------------------------- @@ -2938,7 +2938,7 @@ test_group_recurse2(void) * FILE 2-2 *------------------------------------------------------------------------*/ - /* crate target file */ + /* create target file */ fileid3 = H5Fcreate(GRP_RECURSE2_EXT2, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); /*----------------------------------------------- @@ -2990,7 +2990,7 @@ test_group_recurse2(void) * FILE 2-1 *------------------------------------------------------------------------*/ - /* crate target file */ + /* create target file */ fileid2 = H5Fcreate(GRP_RECURSE2_EXT1, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); /*----------------------------------------------- @@ -4856,7 +4856,7 @@ test_data_nocomparables(const char *fname, int make_diffs) /* attr1 - non-compatible : different type */ write_attr(did2, 1, dims1_1, "attr1", tid_attr1, attr_data_ptr2); - /* attr2 - non-compatible : same rank, different dimention */ + /* attr2 - non-compatible : same rank, different dimension */ write_attr(did2, 1, (hsize_t *)attr2_dim_ptr, "attr2", H5T_NATIVE_INT, data3); /* attr3 - non-compatible : different rank */ @@ -5210,27 +5210,27 @@ write_attr_strings(hid_t loc_id, const char *dset_name, hid_t fid, char buf1[2][STR_SIZE] = {"ab", "de"}; /* string */ char * buf1a[2]; /* VL string */ char buf2[2] = {1, 2}; /* bitfield, opaque */ - s_t buf3[2] = {{1, 2.0F}, {3, 4.0F}}; /* compound */ + s_t buf3[2] = {{1, 2.0}, {3, 4.0}}; /* compound */ hobj_ref_t buf4[2]; /* reference */ e_t buf45[2] = {RED, RED}; /* enum */ hvl_t buf5[2]; /* vlen */ hsize_t dimarray[1] = {3}; /* array dimension */ int buf6[2][3] = {{1, 2, 3}, {4, 5, 6}}; /* array */ int buf7[2] = {1, 2}; /* integer */ - float buf8[2] = {1.0F, 2.0F}; /* float */ + float buf8[2] = {1.0, 2.0}; /* float */ /* create 2D attributes with dimension [3][2], 6 elements */ - hsize_t dims2[2] = {3, 2}; - char buf12[3][2][STR_SIZE] = {{"ab", "cd"}, {"ef", "gh"}, {"ij", "kl"}}; /* string */ - char * buf12a[3][2]; /* VL string */ - char buf22[3][2] = {{1, 2}, {3, 4}, {5, 6}}; /* bitfield, opaque */ - s_t buf32[6] = {{1, 2.0F}, {3, 4.0F}, {5, 6.0F}, {7, 8.0F}, {9, 10.0F}, {11, 12.0F}}; /* compound */ + hsize_t dims2[2] = {3, 2}; + char buf12[3][2][STR_SIZE] = {{"ab", "cd"}, {"ef", "gh"}, {"ij", "kl"}}; /* string */ + char * buf12a[3][2]; /* VL string */ + char buf22[3][2] = {{1, 2}, {3, 4}, {5, 6}}; /* bitfield, opaque */ + s_t buf32[6] = {{1, 2.0}, {3, 4.0}, {5, 6.0}, {7, 8.0}, {9, 10.0}, {11, 12.0}}; /* compound */ hobj_ref_t buf42[3][2]; /* reference */ e_t buf452[3][2]; /* enum */ hvl_t buf52[3][2]; /* vlen */ int buf62[6][3] = {{1, 2, 3}, {4, 5, 6}, {7, 8, 9}, {10, 11, 12}, {13, 14, 15}, {16, 17, 18}}; /* array */ - int buf72[3][2] = {{1, 2}, {3, 4}, {5, 6}}; /* integer */ - float buf82[3][2] = {{1.0F, 2.0F}, {3.0F, 4.0F}, {5.0F, 6.0F}}; /* float */ + int buf72[3][2] = {{1, 2}, {3, 4}, {5, 6}}; /* integer */ + float buf82[3][2] = {{1.0, 2.0}, {3.0, 4.0}, {5.0, 6.0}}; /* float */ /* create 3D attributes with dimension [4][3][2], 24 elements */ hsize_t dims3[3] = {4, 3, 2}; @@ -5931,7 +5931,7 @@ write_attr_strings(hid_t loc_id, const char *dset_name, hid_t fid, for (k = 0; k < 2; k++) if (make_diffs) { buf33[i][j][k].a = 0; - buf33[i][j][k].b = 0.0F; + buf33[i][j][k].b = 0.0; } else { buf33[i][j][k].a = (char)n++; @@ -6141,7 +6141,7 @@ write_attr_strings(hid_t loc_id, const char *dset_name, hid_t fid, for (k = 0; k < 2; k++) { if (make_diffs) { buf73[i][j][k] = 0; - buf83[i][j][k] = 0.0F; + buf83[i][j][k] = 0.0; } else { buf73[i][j][k] = n++; @@ -6199,27 +6199,27 @@ write_attr_in(hid_t loc_id, const char *dset_name, hid_t fid, char buf1[2][STR_SIZE] = {"ab", "de"}; /* string */ char * buf1a[2]; /* VL string */ char buf2[2] = {1, 2}; /* bitfield, opaque */ - s_t buf3[2] = {{1, 2.0F}, {3, 4.0F}}; /* compound */ + s_t buf3[2] = {{1, 2.0}, {3, 4.0}}; /* compound */ hobj_ref_t buf4[2]; /* reference */ e_t buf45[2] = {RED, RED}; /* enum */ hvl_t buf5[2]; /* vlen */ hsize_t dimarray[1] = {3}; /* array dimension */ int buf6[2][3] = {{1, 2, 3}, {4, 5, 6}}; /* array */ int buf7[2] = {1, 2}; /* integer */ - float buf8[2] = {1.0F, 2.0F}; /* float */ + float buf8[2] = {1.0, 2.0}; /* float */ /* create 2D attributes with dimension [3][2], 6 elements */ - hsize_t dims2[2] = {3, 2}; - char buf12[3][2][STR_SIZE] = {{"ab", "cd"}, {"ef", "gh"}, {"ij", "kl"}}; /* string */ - char * buf12a[3][2]; /* VL string */ - char buf22[3][2] = {{1, 2}, {3, 4}, {5, 6}}; /* bitfield, opaque */ - s_t buf32[6] = {{1, 2.0F}, {3, 4.0F}, {5, 6.0F}, {7, 8.0F}, {9, 10.0F}, {11, 12.0F}}; /* compound */ + hsize_t dims2[2] = {3, 2}; + char buf12[3][2][STR_SIZE] = {{"ab", "cd"}, {"ef", "gh"}, {"ij", "kl"}}; /* string */ + char * buf12a[3][2]; /* VL string */ + char buf22[3][2] = {{1, 2}, {3, 4}, {5, 6}}; /* bitfield, opaque */ + s_t buf32[6] = {{1, 2.0}, {3, 4.0}, {5, 6.0}, {7, 8.0}, {9, 10.0}, {11, 12.0}}; /* compound */ hobj_ref_t buf42[3][2]; /* reference */ e_t buf452[3][2]; /* enum */ hvl_t buf52[3][2]; /* vlen */ int buf62[6][3] = {{1, 2, 3}, {4, 5, 6}, {7, 8, 9}, {10, 11, 12}, {13, 14, 15}, {16, 17, 18}}; /* array */ - int buf72[3][2] = {{1, 2}, {3, 4}, {5, 6}}; /* integer */ - float buf82[3][2] = {{1.0F, 2.0F}, {3.0F, 4.0F}, {5.0F, 6.0F}}; /* float */ + int buf72[3][2] = {{1, 2}, {3, 4}, {5, 6}}; /* integer */ + float buf82[3][2] = {{1.0, 2.0}, {3.0, 4.0}, {5.0, 6.0}}; /* float */ /* create 3D attributes with dimension [4][3][2], 24 elements */ hsize_t dims3[3] = {4, 3, 2}; @@ -6920,7 +6920,7 @@ write_attr_in(hid_t loc_id, const char *dset_name, hid_t fid, for (k = 0; k < 2; k++) { if (make_diffs) { buf33[i][j][k].a = 0; - buf33[i][j][k].b = 0.0F; + buf33[i][j][k].b = 0.0; } else { buf33[i][j][k].a = (char)n++; @@ -7130,7 +7130,7 @@ write_attr_in(hid_t loc_id, const char *dset_name, hid_t fid, for (k = 0; k < 2; k++) { if (make_diffs) { buf73[i][j][k] = 0; - buf83[i][j][k] = 0.0F; + buf83[i][j][k] = 0.0; } else { buf73[i][j][k] = n++; @@ -7191,26 +7191,26 @@ write_dset_in(hid_t loc_id, const char *dset_name, hid_t fid, char buf1[2][STR_SIZE] = {"ab", "de"}; /* string */ char * buf1a[2]; /* VL string */ char buf2[2] = {1, 2}; /* bitfield, opaque */ - s_t buf3[2] = {{1, 2.0F}, {3, 4.0F}}; /* compound */ + s_t buf3[2] = {{1, 2.0}, {3, 4.0}}; /* compound */ hobj_ref_t buf4[2]; /* reference */ e_t buf45[2] = {RED, GREEN}; /* enum */ hvl_t buf5[2]; /* vlen */ hsize_t dimarray[1] = {3}; /* array dimension */ int buf6[2][3] = {{1, 2, 3}, {4, 5, 6}}; /* array */ int buf7[2] = {1, 2}; /* integer */ - float buf8[2] = {1.0F, 2.0F}; /* float */ + float buf8[2] = {1.0, 2.0}; /* float */ /* create 2D attributes with dimension [3][2], 6 elements */ - hsize_t dims2[2] = {3, 2}; - char buf12[3][2][STR_SIZE] = {{"ab", "cd"}, {"ef", "gh"}, {"ij", "kl"}}; /* string */ - char * buf12a[3][2]; /* VL string */ - char buf22[3][2] = {{1, 2}, {3, 4}, {5, 6}}; /* bitfield, opaque */ - s_t buf32[6] = {{1, 2.0F}, {3, 4.0F}, {5, 6.0F}, {7, 8.0F}, {9, 10.0F}, {11, 12.0F}}; /* compound */ + hsize_t dims2[2] = {3, 2}; + char buf12[3][2][STR_SIZE] = {{"ab", "cd"}, {"ef", "gh"}, {"ij", "kl"}}; /* string */ + char * buf12a[3][2]; /* VL string */ + char buf22[3][2] = {{1, 2}, {3, 4}, {5, 6}}; /* bitfield, opaque */ + s_t buf32[6] = {{1, 2.0}, {3, 4.0}, {5, 6.0}, {7, 8.0}, {9, 10.0}, {11, 12.0}}; /* compound */ hobj_ref_t buf42[3][2]; /* reference */ hvl_t buf52[3][2]; /* vlen */ int buf62[6][3] = {{1, 2, 3}, {4, 5, 6}, {7, 8, 9}, {10, 11, 12}, {13, 14, 15}, {16, 17, 18}}; /* array */ - int buf72[3][2] = {{1, 2}, {3, 4}, {5, 6}}; /* integer */ - float buf82[3][2] = {{1.0F, 2.0F}, {3.0F, 4.0F}, {5.0F, 6.0F}}; /* float */ + int buf72[3][2] = {{1, 2}, {3, 4}, {5, 6}}; /* integer */ + float buf82[3][2] = {{1.0, 2.0}, {3.0, 4.0}, {5.0, 6.0}}; /* float */ /* create 3D attributes with dimension [4][3][2], 24 elements */ hsize_t dims3[3] = {4, 3, 2}; @@ -7678,7 +7678,7 @@ write_dset_in(hid_t loc_id, const char *dset_name, hid_t fid, for (k = 0; k < 2; k++) { if (make_diffs) { buf33[i][j][k].a = 0; - buf33[i][j][k].b = 0.0F; + buf33[i][j][k].b = 0.0; } else { buf33[i][j][k].a = (char)n++; @@ -7776,7 +7776,7 @@ write_dset_in(hid_t loc_id, const char *dset_name, hid_t fid, for (k = 0; k < 2; k++) { if (make_diffs) { buf73[i][j][k] = 0; - buf83[i][j][k] = 0.0F; + buf83[i][j][k] = 0.0; } else { buf73[i][j][k] = n++; @@ -7905,7 +7905,7 @@ gen_datareg(hid_t fid, int make_diffs /* flag to modify data buffers */) * Function: test_hyperslab * * Purpose: test diff by hyperslabs. create a dataset with 1GB dimensions - * by iterating trough 1KB hyperslabs + * by iterating through 1KB hyperslabs * *------------------------------------------------------------------------- */ diff --git a/tools/test/h5diff/testfiles/h5diff_10.txt b/tools/test/h5diff/testfiles/h5diff_10.txt index 3631db7..853aede 100644 --- a/tools/test/h5diff/testfiles/h5diff_10.txt +++ b/tools/test/h5diff/testfiles/h5diff_10.txt @@ -36,6 +36,18 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] HDF5 file specified --vol-info-2 VOL-specific info to pass to the VOL connector used for opening the second HDF5 file specified + --vfd-value-1 Value (ID) of the VFL driver to use for opening the + first HDF5 file specified + --vfd-name-1 Name of the VFL driver to use for opening the first + HDF5 file specified + --vfd-info-1 VFD-specific info to pass to the VFL driver used for + opening the first HDF5 file specified + --vfd-value-2 Value (ID) of the VFL driver to use for opening the + second HDF5 file specified + --vfd-name-2 Name of the VFL driver to use for opening the second + HDF5 file specified + --vfd-info-2 VFD-specific info to pass to the VFL driver used for + opening the second HDF5 file specified --follow-symlinks Follow symbolic links (soft links and external links and compare the) links' target objects. @@ -117,7 +129,7 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] This option can be used repeatedly to exclude multiple paths. Modes of output: - Default mode: print the number of differences found and where they occured + Default mode: print the number of differences found and where they occurred -r Report mode: print the above plus the differences -v Verbose mode: print the above plus a list of objects and warnings -q Quiet mode: do not print output diff --git a/tools/test/h5diff/testfiles/h5diff_600.txt b/tools/test/h5diff/testfiles/h5diff_600.txt index 8a4ce6d..2893b78 100644 --- a/tools/test/h5diff/testfiles/h5diff_600.txt +++ b/tools/test/h5diff/testfiles/h5diff_600.txt @@ -36,6 +36,18 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] HDF5 file specified --vol-info-2 VOL-specific info to pass to the VOL connector used for opening the second HDF5 file specified + --vfd-value-1 Value (ID) of the VFL driver to use for opening the + first HDF5 file specified + --vfd-name-1 Name of the VFL driver to use for opening the first + HDF5 file specified + --vfd-info-1 VFD-specific info to pass to the VFL driver used for + opening the first HDF5 file specified + --vfd-value-2 Value (ID) of the VFL driver to use for opening the + second HDF5 file specified + --vfd-name-2 Name of the VFL driver to use for opening the second + HDF5 file specified + --vfd-info-2 VFD-specific info to pass to the VFL driver used for + opening the second HDF5 file specified --follow-symlinks Follow symbolic links (soft links and external links and compare the) links' target objects. @@ -117,7 +129,7 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] This option can be used repeatedly to exclude multiple paths. Modes of output: - Default mode: print the number of differences found and where they occured + Default mode: print the number of differences found and where they occurred -r Report mode: print the above plus the differences -v Verbose mode: print the above plus a list of objects and warnings -q Quiet mode: do not print output diff --git a/tools/test/h5diff/testfiles/h5diff_603.txt b/tools/test/h5diff/testfiles/h5diff_603.txt index d4c7336..4317282 100644 --- a/tools/test/h5diff/testfiles/h5diff_603.txt +++ b/tools/test/h5diff/testfiles/h5diff_603.txt @@ -37,6 +37,18 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] HDF5 file specified --vol-info-2 VOL-specific info to pass to the VOL connector used for opening the second HDF5 file specified + --vfd-value-1 Value (ID) of the VFL driver to use for opening the + first HDF5 file specified + --vfd-name-1 Name of the VFL driver to use for opening the first + HDF5 file specified + --vfd-info-1 VFD-specific info to pass to the VFL driver used for + opening the first HDF5 file specified + --vfd-value-2 Value (ID) of the VFL driver to use for opening the + second HDF5 file specified + --vfd-name-2 Name of the VFL driver to use for opening the second + HDF5 file specified + --vfd-info-2 VFD-specific info to pass to the VFL driver used for + opening the second HDF5 file specified --follow-symlinks Follow symbolic links (soft links and external links and compare the) links' target objects. @@ -118,7 +130,7 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] This option can be used repeatedly to exclude multiple paths. Modes of output: - Default mode: print the number of differences found and where they occured + Default mode: print the number of differences found and where they occurred -r Report mode: print the above plus the differences -v Verbose mode: print the above plus a list of objects and warnings -q Quiet mode: do not print output diff --git a/tools/test/h5diff/testfiles/h5diff_606.txt b/tools/test/h5diff/testfiles/h5diff_606.txt index 3123587..c32142f 100644 --- a/tools/test/h5diff/testfiles/h5diff_606.txt +++ b/tools/test/h5diff/testfiles/h5diff_606.txt @@ -37,6 +37,18 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] HDF5 file specified --vol-info-2 VOL-specific info to pass to the VOL connector used for opening the second HDF5 file specified + --vfd-value-1 Value (ID) of the VFL driver to use for opening the + first HDF5 file specified + --vfd-name-1 Name of the VFL driver to use for opening the first + HDF5 file specified + --vfd-info-1 VFD-specific info to pass to the VFL driver used for + opening the first HDF5 file specified + --vfd-value-2 Value (ID) of the VFL driver to use for opening the + second HDF5 file specified + --vfd-name-2 Name of the VFL driver to use for opening the second + HDF5 file specified + --vfd-info-2 VFD-specific info to pass to the VFL driver used for + opening the second HDF5 file specified --follow-symlinks Follow symbolic links (soft links and external links and compare the) links' target objects. @@ -118,7 +130,7 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] This option can be used repeatedly to exclude multiple paths. Modes of output: - Default mode: print the number of differences found and where they occured + Default mode: print the number of differences found and where they occurred -r Report mode: print the above plus the differences -v Verbose mode: print the above plus a list of objects and warnings -q Quiet mode: do not print output diff --git a/tools/test/h5diff/testfiles/h5diff_612.txt b/tools/test/h5diff/testfiles/h5diff_612.txt index ce2d887..a080f29 100644 --- a/tools/test/h5diff/testfiles/h5diff_612.txt +++ b/tools/test/h5diff/testfiles/h5diff_612.txt @@ -37,6 +37,18 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] HDF5 file specified --vol-info-2 VOL-specific info to pass to the VOL connector used for opening the second HDF5 file specified + --vfd-value-1 Value (ID) of the VFL driver to use for opening the + first HDF5 file specified + --vfd-name-1 Name of the VFL driver to use for opening the first + HDF5 file specified + --vfd-info-1 VFD-specific info to pass to the VFL driver used for + opening the first HDF5 file specified + --vfd-value-2 Value (ID) of the VFL driver to use for opening the + second HDF5 file specified + --vfd-name-2 Name of the VFL driver to use for opening the second + HDF5 file specified + --vfd-info-2 VFD-specific info to pass to the VFL driver used for + opening the second HDF5 file specified --follow-symlinks Follow symbolic links (soft links and external links and compare the) links' target objects. @@ -118,7 +130,7 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] This option can be used repeatedly to exclude multiple paths. Modes of output: - Default mode: print the number of differences found and where they occured + Default mode: print the number of differences found and where they occurred -r Report mode: print the above plus the differences -v Verbose mode: print the above plus a list of objects and warnings -q Quiet mode: do not print output diff --git a/tools/test/h5diff/testfiles/h5diff_615.txt b/tools/test/h5diff/testfiles/h5diff_615.txt index 61fd036..a9bd76c 100644 --- a/tools/test/h5diff/testfiles/h5diff_615.txt +++ b/tools/test/h5diff/testfiles/h5diff_615.txt @@ -37,6 +37,18 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] HDF5 file specified --vol-info-2 VOL-specific info to pass to the VOL connector used for opening the second HDF5 file specified + --vfd-value-1 Value (ID) of the VFL driver to use for opening the + first HDF5 file specified + --vfd-name-1 Name of the VFL driver to use for opening the first + HDF5 file specified + --vfd-info-1 VFD-specific info to pass to the VFL driver used for + opening the first HDF5 file specified + --vfd-value-2 Value (ID) of the VFL driver to use for opening the + second HDF5 file specified + --vfd-name-2 Name of the VFL driver to use for opening the second + HDF5 file specified + --vfd-info-2 VFD-specific info to pass to the VFL driver used for + opening the second HDF5 file specified --follow-symlinks Follow symbolic links (soft links and external links and compare the) links' target objects. @@ -118,7 +130,7 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] This option can be used repeatedly to exclude multiple paths. Modes of output: - Default mode: print the number of differences found and where they occured + Default mode: print the number of differences found and where they occurred -r Report mode: print the above plus the differences -v Verbose mode: print the above plus a list of objects and warnings -q Quiet mode: do not print output diff --git a/tools/test/h5diff/testfiles/h5diff_621.txt b/tools/test/h5diff/testfiles/h5diff_621.txt index dc8655d..cf1af15 100644 --- a/tools/test/h5diff/testfiles/h5diff_621.txt +++ b/tools/test/h5diff/testfiles/h5diff_621.txt @@ -37,6 +37,18 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] HDF5 file specified --vol-info-2 VOL-specific info to pass to the VOL connector used for opening the second HDF5 file specified + --vfd-value-1 Value (ID) of the VFL driver to use for opening the + first HDF5 file specified + --vfd-name-1 Name of the VFL driver to use for opening the first + HDF5 file specified + --vfd-info-1 VFD-specific info to pass to the VFL driver used for + opening the first HDF5 file specified + --vfd-value-2 Value (ID) of the VFL driver to use for opening the + second HDF5 file specified + --vfd-name-2 Name of the VFL driver to use for opening the second + HDF5 file specified + --vfd-info-2 VFD-specific info to pass to the VFL driver used for + opening the second HDF5 file specified --follow-symlinks Follow symbolic links (soft links and external links and compare the) links' target objects. @@ -118,7 +130,7 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] This option can be used repeatedly to exclude multiple paths. Modes of output: - Default mode: print the number of differences found and where they occured + Default mode: print the number of differences found and where they occurred -r Report mode: print the above plus the differences -v Verbose mode: print the above plus a list of objects and warnings -q Quiet mode: do not print output diff --git a/tools/test/h5diff/testfiles/h5diff_622.txt b/tools/test/h5diff/testfiles/h5diff_622.txt index f20ffbe..3b325de 100644 --- a/tools/test/h5diff/testfiles/h5diff_622.txt +++ b/tools/test/h5diff/testfiles/h5diff_622.txt @@ -37,6 +37,18 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] HDF5 file specified --vol-info-2 VOL-specific info to pass to the VOL connector used for opening the second HDF5 file specified + --vfd-value-1 Value (ID) of the VFL driver to use for opening the + first HDF5 file specified + --vfd-name-1 Name of the VFL driver to use for opening the first + HDF5 file specified + --vfd-info-1 VFD-specific info to pass to the VFL driver used for + opening the first HDF5 file specified + --vfd-value-2 Value (ID) of the VFL driver to use for opening the + second HDF5 file specified + --vfd-name-2 Name of the VFL driver to use for opening the second + HDF5 file specified + --vfd-info-2 VFD-specific info to pass to the VFL driver used for + opening the second HDF5 file specified --follow-symlinks Follow symbolic links (soft links and external links and compare the) links' target objects. @@ -118,7 +130,7 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] This option can be used repeatedly to exclude multiple paths. Modes of output: - Default mode: print the number of differences found and where they occured + Default mode: print the number of differences found and where they occurred -r Report mode: print the above plus the differences -v Verbose mode: print the above plus a list of objects and warnings -q Quiet mode: do not print output diff --git a/tools/test/h5diff/testfiles/h5diff_623.txt b/tools/test/h5diff/testfiles/h5diff_623.txt index f73d202..be34fb4 100644 --- a/tools/test/h5diff/testfiles/h5diff_623.txt +++ b/tools/test/h5diff/testfiles/h5diff_623.txt @@ -37,6 +37,18 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] HDF5 file specified --vol-info-2 VOL-specific info to pass to the VOL connector used for opening the second HDF5 file specified + --vfd-value-1 Value (ID) of the VFL driver to use for opening the + first HDF5 file specified + --vfd-name-1 Name of the VFL driver to use for opening the first + HDF5 file specified + --vfd-info-1 VFD-specific info to pass to the VFL driver used for + opening the first HDF5 file specified + --vfd-value-2 Value (ID) of the VFL driver to use for opening the + second HDF5 file specified + --vfd-name-2 Name of the VFL driver to use for opening the second + HDF5 file specified + --vfd-info-2 VFD-specific info to pass to the VFL driver used for + opening the second HDF5 file specified --follow-symlinks Follow symbolic links (soft links and external links and compare the) links' target objects. @@ -118,7 +130,7 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] This option can be used repeatedly to exclude multiple paths. Modes of output: - Default mode: print the number of differences found and where they occured + Default mode: print the number of differences found and where they occurred -r Report mode: print the above plus the differences -v Verbose mode: print the above plus a list of objects and warnings -q Quiet mode: do not print output diff --git a/tools/test/h5diff/testfiles/h5diff_624.txt b/tools/test/h5diff/testfiles/h5diff_624.txt index 903b738..ebb76af 100644 --- a/tools/test/h5diff/testfiles/h5diff_624.txt +++ b/tools/test/h5diff/testfiles/h5diff_624.txt @@ -37,6 +37,18 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] HDF5 file specified --vol-info-2 VOL-specific info to pass to the VOL connector used for opening the second HDF5 file specified + --vfd-value-1 Value (ID) of the VFL driver to use for opening the + first HDF5 file specified + --vfd-name-1 Name of the VFL driver to use for opening the first + HDF5 file specified + --vfd-info-1 VFD-specific info to pass to the VFL driver used for + opening the first HDF5 file specified + --vfd-value-2 Value (ID) of the VFL driver to use for opening the + second HDF5 file specified + --vfd-name-2 Name of the VFL driver to use for opening the second + HDF5 file specified + --vfd-info-2 VFD-specific info to pass to the VFL driver used for + opening the second HDF5 file specified --follow-symlinks Follow symbolic links (soft links and external links and compare the) links' target objects. @@ -118,7 +130,7 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] This option can be used repeatedly to exclude multiple paths. Modes of output: - Default mode: print the number of differences found and where they occured + Default mode: print the number of differences found and where they occurred -r Report mode: print the above plus the differences -v Verbose mode: print the above plus a list of objects and warnings -q Quiet mode: do not print output diff --git a/tools/test/h5diff/testh5diff.sh.in b/tools/test/h5diff/testh5diff.sh.in index bd27dd0..6871463 100644 --- a/tools/test/h5diff/testh5diff.sh.in +++ b/tools/test/h5diff/testh5diff.sh.in @@ -455,7 +455,7 @@ done # RUNSERIAL is used. Check if it can return exit code from executalbe correctly. if [ -n "$RUNSERIAL_NOEXITCODE" ]; then - echo "***Warning*** Serial Exit Code is not passed back to shell corretly." + echo "***Warning*** Serial Exit Code is not passed back to shell correctly." echo "***Warning*** Exit code checking is skipped." h5haveexitcode=no fi @@ -518,7 +518,7 @@ TOOLTEST() { # don't add exit code check in pmode, as it causes failure. (exit code # is from mpirun not tool) # if any problem occurs relate to an exit code, it will be caught in - # serial mode, so the test is fullfilled. + # serial mode, so the test is fulfilled. if test $h5haveexitcode = 'yes' -a -z "$pmode"; then echo "EXIT CODE: $EXIT_CODE" >> $actual fi @@ -926,7 +926,7 @@ TOOLTEST h5diff_207.txt -c h5diff_basic2.h5 h5diff_basic2.h5 g2/dset8 g2/dset9 TOOLTEST h5diff_208.txt -c h5diff_dset_zero_dim_size1.h5 h5diff_dset_zero_dim_size2.h5 # non-comparable dataset with comparable attribute, and other comparable datasets. -# Also test non-compatible attributes with different type, dimention, rank. +# Also test non-compatible attributes with different type, dimension, rank. # All the comparables should display differences. TOOLTEST h5diff_220.txt -c non_comparables1.h5 non_comparables2.h5 /g1 @@ -1089,7 +1089,7 @@ TOOLTEST h5diff_474.txt -v h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /ext_li TOOLTEST h5diff_475.txt -v h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /ext_link1 # ############################################################################## -# # test for group diff recursivly +# # test for group diff recursively # ############################################################################## # root TOOLTEST h5diff_500.txt -v h5diff_grp_recurse1.h5 h5diff_grp_recurse2.h5 / / diff --git a/tools/test/h5dump/CMakeTests.cmake b/tools/test/h5dump/CMakeTests.cmake index c0f279d..933aba9 100644 --- a/tools/test/h5dump/CMakeTests.cmake +++ b/tools/test/h5dump/CMakeTests.cmake @@ -863,7 +863,7 @@ # test for named data types ADD_H5_TEST (tcomp-2 0 --enable-error-stack -t /type1 --datatype /type2 --datatype=/group1/type3 tcompound.h5) ADD_H5_TEST_N (tcomp-2 0 --enable-error-stack -N /type1 --any_path /type2 --any_path=/group1/type3 tcompound.h5) - # test for unamed type + # test for unnamed type ADD_H5ERR_MASK_TEST (tcomp-3 0 "object '#6632' doesn't exist" "--enable-error-stack;-t;/#6632;-g;/group2;tcompound.h5") # test complicated compound datatype ADD_H5_TEST (tcomp-4 0 --enable-error-stack tcompound_complex.h5) diff --git a/tools/test/h5dump/CMakeTestsPBITS.cmake b/tools/test/h5dump/CMakeTestsPBITS.cmake index 06be332..0c3297f 100644 --- a/tools/test/h5dump/CMakeTestsPBITS.cmake +++ b/tools/test/h5dump/CMakeTestsPBITS.cmake @@ -158,7 +158,7 @@ # Limits: # Maximum number of packed bits is 8 (for now). # Maximum integer size is 8*sizeof(long long). - # Maximun Offset is Maximum size - 1. + # Maximum Offset is Maximum size - 1. # Maximum Offset+Length is Maximum size. # Tests: # Normal operation on both signed and unsigned int datasets. diff --git a/tools/test/h5dump/CMakeVFDTests.cmake b/tools/test/h5dump/CMakeVFDTests.cmake index 01834b3..7ab8c1f 100644 --- a/tools/test/h5dump/CMakeVFDTests.cmake +++ b/tools/test/h5dump/CMakeVFDTests.cmake @@ -15,20 +15,7 @@ ### T E S T I N G ### ############################################################################## ############################################################################## - -set (VFD_H5DUMP_LIST - sec2 - stdio - core - core_paged - split - multi - family -) - -if (H5_HAVE_DIRECT) - set (VFD_H5DUMP_LIST ${VFD_H5DUMP_LIST} direct) -endif () +H5_CREATE_VFD_DIR() # -------------------------------------------------------------------- # Copy all the HDF5 files from the source directory into the test directory @@ -37,8 +24,7 @@ set (HDF5_VFD_H5DUMP_FILES packedbits ) -foreach (vfdtest ${VFD_H5DUMP_LIST}) - file (MAKE_DIRECTORY "${PROJECT_BINARY_DIR}/${vfdname}") +foreach (vfdtest ${VFD_LIST}) foreach (h5_tfile ${HDF5_VFD_H5DUMP_FILES}) HDFTEST_COPY_FILE("${HDF5_TOOLS_DIR}/testfiles/${h5_tfile}.h5" "${PROJECT_BINARY_DIR}/${vfdtest}/${h5_tfile}.h5" "HDF5_VFD_H5DUMP_files") HDFTEST_COPY_FILE("${HDF5_TOOLS_DIR}/testfiles/${h5_tfile}.ddl" "${PROJECT_BINARY_DIR}/${vfdtest}/${h5_tfile}.ddl" "HDF5_VFD_H5DUMP_files") @@ -79,7 +65,7 @@ endmacro () ############################################################################## # Run test with different Virtual File Driver -foreach (vfd ${VFD_H5DUMP_LIST}) +foreach (vfd ${VFD_LIST}) # test for signed/unsigned datasets ADD_VFD_H5DUMP_TEST (${vfd} packedbits 0 --enable-error-stack packedbits.h5) endforeach () diff --git a/tools/test/h5dump/binread.c b/tools/test/h5dump/binread.c index d6206ca..341a085 100644 --- a/tools/test/h5dump/binread.c +++ b/tools/test/h5dump/binread.c @@ -59,7 +59,7 @@ usage(void) */ int -main(int argc, const char *argv[]) +main(int argc, char *argv[]) { FILE * stream; size_t numread; diff --git a/tools/test/h5dump/h5dumpgentest.c b/tools/test/h5dump/h5dumpgentest.c index e74054c..5258211 100644 --- a/tools/test/h5dump/h5dumpgentest.c +++ b/tools/test/h5dump/h5dumpgentest.c @@ -236,7 +236,7 @@ typedef struct s1_t { #define ARRAY3_DIM2 3 /* VL string datatype name */ -/* TODO remove complier error not used, remove the link when everything is OK */ +/* TODO remove compiler error not used, remove the link when everything is OK */ /* #define VLSTR_TYPE "vl_string_type" */ /* "File 41" macros */ @@ -498,7 +498,7 @@ gent_dataset(void) for (i = 0; i < 30; i++) for (j = 0; j < 20; j++) - dset2[i][j] = 0.0001F * (float)j + (float)i; + dset2[i][j] = 0.0001 * (double)j + (double)i; H5Dwrite(dataset, H5T_NATIVE_DOUBLE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset2_data); @@ -605,7 +605,7 @@ gent_attribute(void) attr = H5Acreate2(root, "attr3", H5T_IEEE_F64BE, space, H5P_DEFAULT, H5P_DEFAULT); for (i = 0; i < 10; i++) - d[i] = 0.1F * (float)i; + d[i] = 0.1 * (double)i; H5Awrite(attr, H5T_NATIVE_DOUBLE, d); H5Sclose(space); @@ -1019,7 +1019,7 @@ gent_compound_dt(void) for (i = 0; i < (int)sdim; i++) { dset1[i].a = i; dset1[i].b = (float)(i * i); - dset1[i].c = (float)(1.0F / (float)(i + 1)); + dset1[i].c = (double)(1.0 / (double)(i + 1)); dset2[i].a = i; dset2[i].b = (float)((float)i + (float)i * 0.1F); @@ -1128,7 +1128,7 @@ gent_compound_dt(void) H5Dclose(dataset); H5Gclose(group); - /* unamed data type */ + /* unnamed data type */ group = H5Gcreate2(fid, "/group2", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); type = H5Tcreate(H5T_COMPOUND, sizeof(dset5_t)); @@ -1206,7 +1206,7 @@ gent_compound_dt2(void) for (i = 0; i < (int)sdim; i++) { dset1[i].a = i; dset1[i].b = (float)(i * i); - dset1[i].c = (float)(1.0F / (float)(i + 1)); + dset1[i].c = (double)(1.0 / (double)(i + 1)); dset2[i].a = i; dset2[i].b = (float)((float)i + (float)i * 0.1F); @@ -1312,7 +1312,7 @@ gent_compound_dt2(void) H5Dclose(dataset); H5Gclose(group); - /* unamed data type */ + /* unnamed data type */ group = H5Gcreate2(fid, "/group2", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); type = H5Tcreate(H5T_COMPOUND, sizeof(dset5_t)); @@ -1522,11 +1522,11 @@ gent_loop2(void) fid = H5Fcreate(FILE11, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); - /* create group object g1 and implcit path from root object */ + /* create group object g1 and implicit path from root object */ group = H5Gcreate2(fid, "/g1", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); H5Gclose(group); - /* create group object g2 and implcit path from root object */ + /* create group object g2 and implicit path from root object */ group = H5Gcreate2(fid, "/g2", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); H5Gclose(group); @@ -1646,7 +1646,7 @@ gent_many(void) space2 = H5Screate_simple(1, dims, NULL); attr = H5Acreate2(dataset, "attr3", H5T_IEEE_F64BE, space2, H5P_DEFAULT, H5P_DEFAULT); for (i = 0; i < 10; i++) - d[i] = 0.1F * (float)i; + d[i] = 0.1 * (double)i; H5Awrite(attr, H5T_NATIVE_DOUBLE, d); H5Sclose(space2); H5Aclose(attr); @@ -2468,7 +2468,7 @@ gent_attrreg(void) static void gent_nestcomp(void) { - /* Compound memeber of the compound datatype*/ + /* Compound member of the compound datatype*/ typedef struct cmp_t { char a; float b[2]; @@ -2503,7 +2503,7 @@ gent_nestcomp(void) for (i = 0; i < 10; i++) { s1[i].a = i; s1[i].b = (float)(i * i); - s1[i].c = 1.0F / (float)(i + 1); + s1[i].c = 1.0 / (double)(i + 1); s1[i].d.a = (char)(65 + i); s1[i].d.b[0] = -100.0F; s1[i].d.b[1] = 100.0F; @@ -2541,7 +2541,7 @@ gent_nestcomp(void) H5Tinsert(s2_tid, "c_name", HOFFSET(s2_t, c), H5T_NATIVE_DOUBLE); H5Tinsert(s2_tid, "b_name", HOFFSET(s2_t, b), H5T_NATIVE_FLOAT); - /* Insert compound memeber created above */ + /* Insert compound member created above */ H5Tinsert(s2_tid, "d_name", HOFFSET(s2_t, d), cmp_tid); /* @@ -5077,7 +5077,7 @@ gent_compound_complex(void) Array1[m].e = (float)((float)m * 0.96F); for (n = 0; n < F41_ARRAY_DIMf; n++) - Array1[m].f[n] = ((float)m * 1024.9637F); + Array1[m].f[n] = ((double)m * 1024.9637); Array1[m].g = 'm'; } @@ -5218,7 +5218,7 @@ gent_named_dtype_attr(void) sid = H5Screate(H5S_SCALAR); HDassert(sid > 0); - /* Create attribute on commited datatype */ + /* Create attribute on committed datatype */ aid = H5Acreate2(tid, F42_ATTRNAME, H5T_STD_I32LE, sid, H5P_DEFAULT, H5P_DEFAULT); HDassert(aid > 0); @@ -5735,7 +5735,7 @@ gent_filters(void) HDassert(ret >= 0); if (supports_comments & H5VL_OPT_QUERY_SUPPORTED) { - ret = H5Oset_comment_by_name(fid, "mytype", "This is a commited datatype", H5P_DEFAULT); + ret = H5Oset_comment_by_name(fid, "mytype", "This is a committed datatype", H5P_DEFAULT); HDassert(ret >= 0); } @@ -6361,7 +6361,7 @@ gent_ldouble_scalar(void) hid_t tid; hid_t sid; hsize_t dims[1] = {6}; - long double buf[6] = {0.0, 1.0, 2.0, 3.0, 4.0, 5.0}; + long double buf[6] = {0.0L, 1.0L, 2.0L, 3.0L, 4.0L, 5.0L}; if ((fid = H5Fcreate(FILE88, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto error; @@ -6803,7 +6803,7 @@ gent_attr_creation_order(void) goto out; /*------------------------------------------------------------------------- - * create a dataset with creation order tracked for attributes and atributes in it + * create a dataset with creation order tracked for attributes and attributes in it *------------------------------------------------------------------------- */ @@ -6827,7 +6827,7 @@ gent_attr_creation_order(void) did = H5I_INVALID_HID; /*------------------------------------------------------------------------- - * create a dataset without creation order tracked for attributes and atributes in it + * create a dataset without creation order tracked for attributes and attributes in it *------------------------------------------------------------------------- */ @@ -6851,7 +6851,7 @@ gent_attr_creation_order(void) did = H5I_INVALID_HID; /*------------------------------------------------------------------------- - * create a group with creation order tracked for attributes and atributes in it + * create a group with creation order tracked for attributes and attributes in it *------------------------------------------------------------------------- */ @@ -6874,7 +6874,7 @@ gent_attr_creation_order(void) gid = H5I_INVALID_HID; /*------------------------------------------------------------------------- - * create a group without creation order tracked for attributes and atributes in it + * create a group without creation order tracked for attributes and attributes in it *------------------------------------------------------------------------- */ @@ -6897,7 +6897,7 @@ gent_attr_creation_order(void) gid = H5I_INVALID_HID; /*------------------------------------------------------------------------- - * create a named datatype with creation order tracked for attributes and atributes in it + * create a named datatype with creation order tracked for attributes and attributes in it *------------------------------------------------------------------------- */ @@ -6923,7 +6923,7 @@ gent_attr_creation_order(void) tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- - * create a named datatype without creation order tracked for attributes and atributes in it + * create a named datatype without creation order tracked for attributes and attributes in it *------------------------------------------------------------------------- */ @@ -7022,7 +7022,7 @@ gent_fpformat(void) { hid_t fid, sid, did; hsize_t dims[1] = {6}; - double dbuf[6] = {-0.1234567f, 0.1234567f, 0, 0, 0, 0}; + double dbuf[6] = {-0.1234567, 0.1234567, 0, 0, 0, 0}; float fbuf[6] = {-0.1234567f, 0.1234567f, 0, 0, 0, 0}; fid = H5Fcreate(FILE60, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); @@ -7264,15 +7264,33 @@ gent_packedbits(void) hid_t space = H5I_INVALID_HID; hsize_t dims[2]; - uint8_t ** dsetu8 = NULL; - uint16_t **dsetu16 = NULL; - uint32_t **dsetu32 = NULL; - uint64_t **dsetu64 = NULL; - int8_t ** dset8 = NULL; - int16_t ** dset16 = NULL; - int32_t ** dset32 = NULL; - int64_t ** dset64 = NULL; - double ** dsetdbl = NULL; + struct { + uint8_t arr[F66_XDIM][F66_YDIM8]; + } * dsetu8; + struct { + uint16_t arr[F66_XDIM][F66_YDIM16]; + } * dsetu16; + struct { + uint32_t arr[F66_XDIM][F66_YDIM32]; + } * dsetu32; + struct { + uint64_t arr[F66_XDIM][F66_YDIM64]; + } * dsetu64; + struct { + int8_t arr[F66_XDIM][F66_YDIM8]; + } * dset8; + struct { + int16_t arr[F66_XDIM][F66_YDIM16]; + } * dset16; + struct { + int32_t arr[F66_XDIM][F66_YDIM32]; + } * dset32; + struct { + int64_t arr[F66_XDIM][F66_YDIM64]; + } * dset64; + struct { + double arr[F66_XDIM][F66_YDIM8]; + } * dsetdbl; uint8_t valu8bits; uint16_t valu16bits; @@ -7286,15 +7304,15 @@ gent_packedbits(void) unsigned int i, j; /* Create arrays */ - H5TEST_ALLOCATE_2D_ARRAY(dsetu8, uint8_t, F66_XDIM, F66_YDIM8); - H5TEST_ALLOCATE_2D_ARRAY(dsetu16, uint16_t, F66_XDIM, F66_YDIM16); - H5TEST_ALLOCATE_2D_ARRAY(dsetu32, uint32_t, F66_XDIM, F66_YDIM32); - H5TEST_ALLOCATE_2D_ARRAY(dsetu64, uint64_t, F66_XDIM, F66_YDIM64); - H5TEST_ALLOCATE_2D_ARRAY(dset8, int8_t, F66_XDIM, F66_YDIM8); - H5TEST_ALLOCATE_2D_ARRAY(dset16, int16_t, F66_XDIM, F66_YDIM16); - H5TEST_ALLOCATE_2D_ARRAY(dset32, int32_t, F66_XDIM, F66_YDIM32); - H5TEST_ALLOCATE_2D_ARRAY(dset64, int64_t, F66_XDIM, F66_YDIM64); - H5TEST_ALLOCATE_2D_ARRAY(dsetdbl, double, F66_XDIM, F66_YDIM8); + dsetu8 = malloc(sizeof(*dsetu8)); + dsetu16 = malloc(sizeof(*dsetu16)); + dsetu32 = malloc(sizeof(*dsetu32)); + dsetu64 = malloc(sizeof(*dsetu64)); + dset8 = malloc(sizeof(*dset8)); + dset16 = malloc(sizeof(*dset16)); + dset32 = malloc(sizeof(*dset32)); + dset64 = malloc(sizeof(*dset64)); + dsetdbl = malloc(sizeof(*dsetdbl)); fid = H5Fcreate(FILE66, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); @@ -7306,13 +7324,13 @@ gent_packedbits(void) valu8bits = (uint8_t)~0u; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu8[i][0] = valu8bits; + dsetu8->arr[i][0] = valu8bits; for (j = 1; j < dims[1]; j++) - dsetu8[i][j] = (uint8_t)(dsetu8[i][j - 1] << 1); + dsetu8->arr[i][j] = (uint8_t)(dsetu8->arr[i][j - 1] << 1); valu8bits = (uint8_t)(valu8bits << 1); } - H5Dwrite(dataset, H5T_NATIVE_UINT8, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu8[0]); + H5Dwrite(dataset, H5T_NATIVE_UINT8, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu8); H5Sclose(space); H5Dclose(dataset); @@ -7324,13 +7342,13 @@ gent_packedbits(void) valu16bits = (uint16_t)~0u; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu16[i][0] = valu16bits; + dsetu16->arr[i][0] = valu16bits; for (j = 1; j < dims[1]; j++) - dsetu16[i][j] = (uint16_t)(dsetu16[i][j - 1] << 1); + dsetu16->arr[i][j] = (uint16_t)(dsetu16->arr[i][j - 1] << 1); valu16bits = (uint16_t)(valu16bits << 1); } - H5Dwrite(dataset, H5T_NATIVE_UINT16, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu16[0]); + H5Dwrite(dataset, H5T_NATIVE_UINT16, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu16); H5Sclose(space); H5Dclose(dataset); @@ -7342,13 +7360,13 @@ gent_packedbits(void) valu32bits = (uint32_t)~0u; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu32[i][0] = valu32bits; + dsetu32->arr[i][0] = valu32bits; for (j = 1; j < dims[1]; j++) - dsetu32[i][j] = dsetu32[i][j - 1] << 1; + dsetu32->arr[i][j] = dsetu32->arr[i][j - 1] << 1; valu32bits <<= 1; } - H5Dwrite(dataset, H5T_NATIVE_UINT32, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu32[0]); + H5Dwrite(dataset, H5T_NATIVE_UINT32, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu32); H5Sclose(space); H5Dclose(dataset); @@ -7360,13 +7378,13 @@ gent_packedbits(void) valu64bits = (uint64_t)~0Lu; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu64[i][0] = valu64bits; + dsetu64->arr[i][0] = valu64bits; for (j = 1; j < dims[1]; j++) - dsetu64[i][j] = dsetu64[i][j - 1] << 1; + dsetu64->arr[i][j] = dsetu64->arr[i][j - 1] << 1; valu64bits <<= 1; } - H5Dwrite(dataset, H5T_NATIVE_UINT64, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu64[0]); + H5Dwrite(dataset, H5T_NATIVE_UINT64, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu64); H5Sclose(space); H5Dclose(dataset); @@ -7378,13 +7396,13 @@ gent_packedbits(void) val8bits = (int8_t)~0; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset8[i][0] = val8bits; + dset8->arr[i][0] = val8bits; for (j = 1; j < dims[1]; j++) - dset8[i][j] = (int8_t)(dset8[i][j - 1] << 1); + dset8->arr[i][j] = (int8_t)(dset8->arr[i][j - 1] << 1); val8bits = (int8_t)(val8bits << 1); } - H5Dwrite(dataset, H5T_NATIVE_INT8, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset8[0]); + H5Dwrite(dataset, H5T_NATIVE_INT8, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset8); H5Sclose(space); H5Dclose(dataset); @@ -7396,13 +7414,13 @@ gent_packedbits(void) val16bits = (int16_t)~0; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset16[i][0] = val16bits; + dset16->arr[i][0] = val16bits; for (j = 1; j < dims[1]; j++) - dset16[i][j] = (int16_t)(dset16[i][j - 1] << 1); + dset16->arr[i][j] = (int16_t)(dset16->arr[i][j - 1] << 1); val16bits = (int16_t)(val16bits << 1); } - H5Dwrite(dataset, H5T_NATIVE_INT16, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset16[0]); + H5Dwrite(dataset, H5T_NATIVE_INT16, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset16); H5Sclose(space); H5Dclose(dataset); @@ -7414,13 +7432,13 @@ gent_packedbits(void) val32bits = (int32_t)~0; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset32[i][0] = val32bits; + dset32->arr[i][0] = val32bits; for (j = 1; j < dims[1]; j++) - dset32[i][j] = dset32[i][j - 1] << 1; + dset32->arr[i][j] = dset32->arr[i][j - 1] << 1; val32bits <<= 1; } - H5Dwrite(dataset, H5T_NATIVE_INT32, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset32[0]); + H5Dwrite(dataset, H5T_NATIVE_INT32, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset32); H5Sclose(space); H5Dclose(dataset); @@ -7432,13 +7450,13 @@ gent_packedbits(void) val64bits = (int64_t)~0L; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset64[i][0] = val64bits; + dset64->arr[i][0] = val64bits; for (j = 1; j < dims[1]; j++) - dset64[i][j] = dset64[i][j - 1] << 1; + dset64->arr[i][j] = dset64->arr[i][j - 1] << 1; val64bits <<= 1; } - H5Dwrite(dataset, H5T_NATIVE_INT64, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset64[0]); + H5Dwrite(dataset, H5T_NATIVE_INT64, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset64); H5Sclose(space); H5Dclose(dataset); @@ -7450,9 +7468,9 @@ gent_packedbits(void) for (i = 0; i < dims[0]; i++) for (j = 0; j < dims[1]; j++) - dsetdbl[i][j] = 0.0001F * (float)j + (float)i; + dsetdbl->arr[i][j] = 0.0001 * (double)j + (double)i; - H5Dwrite(dataset, H5T_NATIVE_DOUBLE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetdbl[0]); + H5Dwrite(dataset, H5T_NATIVE_DOUBLE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetdbl); H5Sclose(space); H5Dclose(dataset); @@ -7489,15 +7507,33 @@ gent_attr_intsize(void) hid_t root = H5I_INVALID_HID; hsize_t dims[2]; - uint8_t ** dsetu8 = NULL; - uint16_t **dsetu16 = NULL; - uint32_t **dsetu32 = NULL; - uint64_t **dsetu64 = NULL; - int8_t ** dset8 = NULL; - int16_t ** dset16 = NULL; - int32_t ** dset32 = NULL; - int64_t ** dset64 = NULL; - double ** dsetdbl = NULL; + struct { + uint8_t arr[F66_XDIM][F66_YDIM8]; + } * dsetu8; + struct { + uint16_t arr[F66_XDIM][F66_YDIM16]; + } * dsetu16; + struct { + uint32_t arr[F66_XDIM][F66_YDIM32]; + } * dsetu32; + struct { + uint64_t arr[F66_XDIM][F66_YDIM64]; + } * dsetu64; + struct { + int8_t arr[F66_XDIM][F66_YDIM8]; + } * dset8; + struct { + int16_t arr[F66_XDIM][F66_YDIM16]; + } * dset16; + struct { + int32_t arr[F66_XDIM][F66_YDIM64]; + } * dset32; + struct { + int64_t arr[F66_XDIM][F66_YDIM64]; + } * dset64; + struct { + double arr[F66_XDIM][F66_YDIM8]; + } * dsetdbl; uint8_t valu8bits; uint16_t valu16bits; @@ -7511,15 +7547,15 @@ gent_attr_intsize(void) unsigned int i, j; /* Create arrays */ - H5TEST_ALLOCATE_2D_ARRAY(dsetu8, uint8_t, F66_XDIM, F66_YDIM8); - H5TEST_ALLOCATE_2D_ARRAY(dsetu16, uint16_t, F66_XDIM, F66_YDIM16); - H5TEST_ALLOCATE_2D_ARRAY(dsetu32, uint32_t, F66_XDIM, F66_YDIM32); - H5TEST_ALLOCATE_2D_ARRAY(dsetu64, uint64_t, F66_XDIM, F66_YDIM64); - H5TEST_ALLOCATE_2D_ARRAY(dset8, int8_t, F66_XDIM, F66_YDIM8); - H5TEST_ALLOCATE_2D_ARRAY(dset16, int16_t, F66_XDIM, F66_YDIM16); - H5TEST_ALLOCATE_2D_ARRAY(dset32, int32_t, F66_XDIM, F66_YDIM32); - H5TEST_ALLOCATE_2D_ARRAY(dset64, int64_t, F66_XDIM, F66_YDIM64); - H5TEST_ALLOCATE_2D_ARRAY(dsetdbl, double, F66_XDIM, F66_YDIM8); + dsetu8 = malloc(sizeof(*dsetu8)); + dsetu16 = malloc(sizeof(*dsetu16)); + dsetu32 = malloc(sizeof(*dsetu32)); + dsetu64 = malloc(sizeof(*dsetu64)); + dset8 = malloc(sizeof(*dset8)); + dset16 = malloc(sizeof(*dset16)); + dset32 = malloc(sizeof(*dset32)); + dset64 = malloc(sizeof(*dset64)); + dsetdbl = malloc(sizeof(*dsetdbl)); fid = H5Fcreate(FILE69, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); root = H5Gopen2(fid, "/", H5P_DEFAULT); @@ -7532,14 +7568,14 @@ gent_attr_intsize(void) valu8bits = (uint8_t)~0u; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu8[i][0] = valu8bits; + dsetu8->arr[i][0] = valu8bits; for (j = 1; j < dims[1]; j++) { - dsetu8[i][j] = (uint8_t)(dsetu8[i][j - 1] << 1); + dsetu8->arr[i][j] = (uint8_t)(dsetu8->arr[i][j - 1] << 1); } valu8bits = (uint8_t)(valu8bits << 1); } - H5Awrite(attr, H5T_NATIVE_UINT8, dsetu8[0]); + H5Awrite(attr, H5T_NATIVE_UINT8, dsetu8); H5Sclose(space); H5Aclose(attr); @@ -7551,14 +7587,14 @@ gent_attr_intsize(void) valu16bits = (uint16_t)~0u; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu16[i][0] = valu16bits; + dsetu16->arr[i][0] = valu16bits; for (j = 1; j < dims[1]; j++) { - dsetu16[i][j] = (uint16_t)(dsetu16[i][j - 1] << 1); + dsetu16->arr[i][j] = (uint16_t)(dsetu16->arr[i][j - 1] << 1); } valu16bits = (uint16_t)(valu16bits << 1); } - H5Awrite(attr, H5T_NATIVE_UINT16, dsetu16[0]); + H5Awrite(attr, H5T_NATIVE_UINT16, dsetu16); H5Sclose(space); H5Aclose(attr); @@ -7570,14 +7606,14 @@ gent_attr_intsize(void) valu32bits = (uint32_t)~0u; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu32[i][0] = valu32bits; + dsetu32->arr[i][0] = valu32bits; for (j = 1; j < dims[1]; j++) { - dsetu32[i][j] = dsetu32[i][j - 1] << 1; + dsetu32->arr[i][j] = dsetu32->arr[i][j - 1] << 1; } valu32bits <<= 1; } - H5Awrite(attr, H5T_NATIVE_UINT32, dsetu32[0]); + H5Awrite(attr, H5T_NATIVE_UINT32, dsetu32); H5Sclose(space); H5Aclose(attr); @@ -7589,14 +7625,14 @@ gent_attr_intsize(void) valu64bits = (uint64_t)~0Lu; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu64[i][0] = valu64bits; + dsetu64->arr[i][0] = valu64bits; for (j = 1; j < dims[1]; j++) { - dsetu64[i][j] = dsetu64[i][j - 1] << 1; + dsetu64->arr[i][j] = dsetu64->arr[i][j - 1] << 1; } valu64bits <<= 1; } - H5Awrite(attr, H5T_NATIVE_UINT64, dsetu64[0]); + H5Awrite(attr, H5T_NATIVE_UINT64, dsetu64); H5Sclose(space); H5Aclose(attr); @@ -7608,14 +7644,14 @@ gent_attr_intsize(void) val8bits = (int8_t)~0; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset8[i][0] = val8bits; + dset8->arr[i][0] = val8bits; for (j = 1; j < dims[1]; j++) { - dset8[i][j] = (int8_t)(dset8[i][j - 1] << 1); + dset8->arr[i][j] = (int8_t)(dset8->arr[i][j - 1] << 1); } val8bits = (int8_t)(val8bits << 1); } - H5Awrite(attr, H5T_NATIVE_INT8, dset8[0]); + H5Awrite(attr, H5T_NATIVE_INT8, dset8); H5Sclose(space); H5Aclose(attr); @@ -7627,14 +7663,14 @@ gent_attr_intsize(void) val16bits = (int16_t)~0; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset16[i][0] = val16bits; + dset16->arr[i][0] = val16bits; for (j = 1; j < dims[1]; j++) { - dset16[i][j] = (int16_t)(dset16[i][j - 1] << 1); + dset16->arr[i][j] = (int16_t)(dset16->arr[i][j - 1] << 1); } val16bits = (int16_t)(val16bits << 1); } - H5Awrite(attr, H5T_NATIVE_INT16, dset16[0]); + H5Awrite(attr, H5T_NATIVE_INT16, dset16); H5Sclose(space); H5Aclose(attr); @@ -7646,14 +7682,14 @@ gent_attr_intsize(void) val32bits = (int32_t)~0; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset32[i][0] = val32bits; + dset32->arr[i][0] = val32bits; for (j = 1; j < dims[1]; j++) { - dset32[i][j] = dset32[i][j - 1] << 1; + dset32->arr[i][j] = dset32->arr[i][j - 1] << 1; } val32bits <<= 1; } - H5Awrite(attr, H5T_NATIVE_INT32, dset32[0]); + H5Awrite(attr, H5T_NATIVE_INT32, dset32); H5Sclose(space); H5Aclose(attr); @@ -7665,14 +7701,14 @@ gent_attr_intsize(void) val64bits = (int64_t)~0L; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset64[i][0] = val64bits; + dset64->arr[i][0] = val64bits; for (j = 1; j < dims[1]; j++) { - dset64[i][j] = dset64[i][j - 1] << 1; + dset64->arr[i][j] = dset64->arr[i][j - 1] << 1; } val64bits <<= 1; } - H5Awrite(attr, H5T_NATIVE_INT64, dset64[0]); + H5Awrite(attr, H5T_NATIVE_INT64, dset64); H5Sclose(space); H5Aclose(attr); @@ -7684,9 +7720,9 @@ gent_attr_intsize(void) for (i = 0; i < dims[0]; i++) for (j = 0; j < dims[1]; j++) - dsetdbl[i][j] = 0.0001F * (float)j + (float)i; + dsetdbl->arr[i][j] = 0.0001 * (double)j + (double)i; - H5Awrite(attr, H5T_NATIVE_DOUBLE, dsetdbl[0]); + H5Awrite(attr, H5T_NATIVE_DOUBLE, dsetdbl); H5Sclose(space); H5Aclose(attr); @@ -7994,7 +8030,7 @@ gent_compound_intsizes(void) for (n = 0; n < (int)dims[0]; n++) for (o = 0; o < (int)dims[1]; o++) - Array1[m].dsetdbl[n][o] = 0.0001F * (float)o + (float)n; + Array1[m].dsetdbl[n][o] = 0.0001 * (double)o + (double)n; } /* Create the array data type for the 8 bits signed int array */ @@ -8284,7 +8320,7 @@ gent_compound_attr_intsizes(void) for (n = 0; n < (int)dims[0]; n++) for (o = 0; o < (int)dims[1]; o++) - Array1[m].dsetdbl[n][o] = 0.0001F * (float)o + (float)n; + Array1[m].dsetdbl[n][o] = 0.0001 * (double)o + (double)n; } /* Create the array data type for the 8 bits signed int array */ @@ -8586,15 +8622,33 @@ gent_intscalars(void) hid_t tid = H5I_INVALID_HID; hsize_t dims[2]; - uint8_t ** dsetu8 = NULL; - uint16_t **dsetu16 = NULL; - uint32_t **dsetu32 = NULL; - uint64_t **dsetu64 = NULL; - int8_t ** dset8 = NULL; - int16_t ** dset16 = NULL; - int32_t ** dset32 = NULL; - int64_t ** dset64 = NULL; - double ** dsetdbl = NULL; + struct { + uint8_t arr[F73_XDIM][F73_YDIM8]; + } * dsetu8; + struct { + uint16_t arr[F73_XDIM][F73_YDIM16]; + } * dsetu16; + struct { + uint32_t arr[F73_XDIM][F73_YDIM32]; + } * dsetu32; + struct { + uint64_t arr[F73_XDIM][F73_YDIM64]; + } * dsetu64; + struct { + int8_t arr[F73_XDIM][F73_YDIM8]; + } * dset8; + struct { + int16_t arr[F73_XDIM][F73_YDIM16]; + } * dset16; + struct { + int32_t arr[F73_XDIM][F73_YDIM32]; + } * dset32; + struct { + int64_t arr[F73_XDIM][F73_YDIM64]; + } * dset64; + struct { + double arr[F73_XDIM][F73_YDIM8]; + } * dsetdbl; uint8_t valu8bits; uint16_t valu16bits; @@ -8608,15 +8662,15 @@ gent_intscalars(void) unsigned int i, j; /* Create arrays */ - H5TEST_ALLOCATE_2D_ARRAY(dsetu8, uint8_t, F73_XDIM, F73_YDIM8); - H5TEST_ALLOCATE_2D_ARRAY(dsetu16, uint16_t, F73_XDIM, F73_YDIM16); - H5TEST_ALLOCATE_2D_ARRAY(dsetu32, uint32_t, F73_XDIM, F73_YDIM32); - H5TEST_ALLOCATE_2D_ARRAY(dsetu64, uint64_t, F73_XDIM, F73_YDIM64); - H5TEST_ALLOCATE_2D_ARRAY(dset8, int8_t, F73_XDIM, F73_YDIM8); - H5TEST_ALLOCATE_2D_ARRAY(dset16, int16_t, F73_XDIM, F73_YDIM16); - H5TEST_ALLOCATE_2D_ARRAY(dset32, int32_t, F73_XDIM, F73_YDIM32); - H5TEST_ALLOCATE_2D_ARRAY(dset64, int64_t, F73_XDIM, F73_YDIM64); - H5TEST_ALLOCATE_2D_ARRAY(dsetdbl, double, F73_XDIM, F73_YDIM8); + dsetu8 = malloc(sizeof(*dsetu8)); + dsetu16 = malloc(sizeof(*dsetu16)); + dsetu32 = malloc(sizeof(*dsetu32)); + dsetu64 = malloc(sizeof(*dsetu64)); + dset8 = malloc(sizeof(*dset8)); + dset16 = malloc(sizeof(*dset16)); + dset32 = malloc(sizeof(*dset32)); + dset64 = malloc(sizeof(*dset64)); + dsetdbl = malloc(sizeof(*dsetdbl)); fid = H5Fcreate(FILE73, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); @@ -8629,14 +8683,14 @@ gent_intscalars(void) valu8bits = (uint8_t)~0u; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu8[i][0] = valu8bits; + dsetu8->arr[i][0] = valu8bits; for (j = 1; j < dims[1]; j++) { - dsetu8[i][j] = (uint8_t)(dsetu8[i][j - 1] << 1); + dsetu8->arr[i][j] = (uint8_t)(dsetu8->arr[i][j - 1] << 1); } valu8bits = (uint8_t)(valu8bits << 1); } - H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu8[0]); + H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu8); H5Sclose(space); H5Dclose(dataset); @@ -8649,14 +8703,14 @@ gent_intscalars(void) valu16bits = (uint16_t)~0u; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu16[i][0] = valu16bits; + dsetu16->arr[i][0] = valu16bits; for (j = 1; j < dims[1]; j++) { - dsetu16[i][j] = (uint16_t)(dsetu16[i][j - 1] << 1); + dsetu16->arr[i][j] = (uint16_t)(dsetu16->arr[i][j - 1] << 1); } valu16bits = (uint16_t)(valu16bits << 1); } - H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu16[0]); + H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu16); H5Sclose(space); H5Dclose(dataset); @@ -8669,14 +8723,14 @@ gent_intscalars(void) valu32bits = (uint32_t)~0u; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu32[i][0] = valu32bits; + dsetu32->arr[i][0] = valu32bits; for (j = 1; j < dims[1]; j++) { - dsetu32[i][j] = dsetu32[i][j - 1] << 1; + dsetu32->arr[i][j] = dsetu32->arr[i][j - 1] << 1; } valu32bits <<= 1; } - H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu32[0]); + H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu32); H5Sclose(space); H5Dclose(dataset); @@ -8689,14 +8743,14 @@ gent_intscalars(void) valu64bits = (uint64_t)~0Lu; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu64[i][0] = valu64bits; + dsetu64->arr[i][0] = valu64bits; for (j = 1; j < dims[1]; j++) { - dsetu64[i][j] = dsetu64[i][j - 1] << 1; + dsetu64->arr[i][j] = dsetu64->arr[i][j - 1] << 1; } valu64bits <<= 1; } - H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu64[0]); + H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu64); H5Sclose(space); H5Dclose(dataset); @@ -8709,14 +8763,14 @@ gent_intscalars(void) val8bits = (int8_t)~0; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset8[i][0] = val8bits; + dset8->arr[i][0] = val8bits; for (j = 1; j < dims[1]; j++) { - dset8[i][j] = (int8_t)(dset8[i][j - 1] << 1); + dset8->arr[i][j] = (int8_t)(dset8->arr[i][j - 1] << 1); } val8bits = (int8_t)(val8bits << 1); } - H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset8[0]); + H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset8); H5Sclose(space); H5Dclose(dataset); @@ -8729,14 +8783,14 @@ gent_intscalars(void) val16bits = (int16_t)~0; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset16[i][0] = val16bits; + dset16->arr[i][0] = val16bits; for (j = 1; j < dims[1]; j++) { - dset16[i][j] = (int16_t)(dset16[i][j - 1] << 1); + dset16->arr[i][j] = (int16_t)(dset16->arr[i][j - 1] << 1); } val16bits = (int16_t)(val16bits << 1); } - H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset16[0]); + H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset16); H5Sclose(space); H5Dclose(dataset); @@ -8749,14 +8803,14 @@ gent_intscalars(void) val32bits = (int32_t)~0; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset32[i][0] = val32bits; + dset32->arr[i][0] = val32bits; for (j = 1; j < dims[1]; j++) { - dset32[i][j] = dset32[i][j - 1] << 1; + dset32->arr[i][j] = dset32->arr[i][j - 1] << 1; } val32bits <<= 1; } - H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset32[0]); + H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset32); H5Sclose(space); H5Dclose(dataset); @@ -8769,14 +8823,14 @@ gent_intscalars(void) val64bits = (int64_t)~0L; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset64[i][0] = val64bits; + dset64->arr[i][0] = val64bits; for (j = 1; j < dims[1]; j++) { - dset64[i][j] = dset64[i][j - 1] << 1; + dset64->arr[i][j] = dset64->arr[i][j - 1] << 1; } val64bits <<= 1; } - H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset64[0]); + H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset64); H5Sclose(space); H5Dclose(dataset); @@ -8789,9 +8843,9 @@ gent_intscalars(void) for (i = 0; i < dims[0]; i++) for (j = 0; j < dims[1]; j++) - dsetdbl[i][j] = 0.0001F * (float)j + (float)i; + dsetdbl->arr[i][j] = 0.0001 * (double)j + (double)i; - H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetdbl[0]); + H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetdbl); H5Sclose(space); H5Dclose(dataset); @@ -8829,15 +8883,33 @@ gent_attr_intscalars(void) hid_t tid = H5I_INVALID_HID; hsize_t dims[2]; - uint8_t ** dsetu8 = NULL; - uint16_t **dsetu16 = NULL; - uint32_t **dsetu32 = NULL; - uint64_t **dsetu64 = NULL; - int8_t ** dset8 = NULL; - int16_t ** dset16 = NULL; - int32_t ** dset32 = NULL; - int64_t ** dset64 = NULL; - double ** dsetdbl = NULL; + struct { + uint8_t arr[F73_XDIM][F73_YDIM8]; + } * dsetu8; + struct { + uint16_t arr[F73_XDIM][F73_YDIM16]; + } * dsetu16; + struct { + uint32_t arr[F73_XDIM][F73_YDIM32]; + } * dsetu32; + struct { + uint64_t arr[F73_XDIM][F73_YDIM64]; + } * dsetu64; + struct { + int8_t arr[F73_XDIM][F73_YDIM8]; + } * dset8; + struct { + int16_t arr[F73_XDIM][F73_YDIM16]; + } * dset16; + struct { + int32_t arr[F73_XDIM][F73_YDIM32]; + } * dset32; + struct { + int64_t arr[F73_XDIM][F73_YDIM64]; + } * dset64; + struct { + double arr[F73_XDIM][F73_YDIM8]; + } * dsetdbl; uint8_t valu8bits; uint16_t valu16bits; @@ -8851,15 +8923,15 @@ gent_attr_intscalars(void) unsigned int i, j; /* Create arrays */ - H5TEST_ALLOCATE_2D_ARRAY(dsetu8, uint8_t, F73_XDIM, F73_YDIM8); - H5TEST_ALLOCATE_2D_ARRAY(dsetu16, uint16_t, F73_XDIM, F73_YDIM16); - H5TEST_ALLOCATE_2D_ARRAY(dsetu32, uint32_t, F73_XDIM, F73_YDIM32); - H5TEST_ALLOCATE_2D_ARRAY(dsetu64, uint64_t, F73_XDIM, F73_YDIM64); - H5TEST_ALLOCATE_2D_ARRAY(dset8, int8_t, F73_XDIM, F73_YDIM8); - H5TEST_ALLOCATE_2D_ARRAY(dset16, int16_t, F73_XDIM, F73_YDIM16); - H5TEST_ALLOCATE_2D_ARRAY(dset32, int32_t, F73_XDIM, F73_YDIM32); - H5TEST_ALLOCATE_2D_ARRAY(dset64, int64_t, F73_XDIM, F73_YDIM64); - H5TEST_ALLOCATE_2D_ARRAY(dsetdbl, double, F73_XDIM, F73_YDIM8); + dsetu8 = malloc(sizeof(*dsetu8)); + dsetu16 = malloc(sizeof(*dsetu16)); + dsetu32 = malloc(sizeof(*dsetu32)); + dsetu64 = malloc(sizeof(*dsetu64)); + dset8 = malloc(sizeof(*dset8)); + dset16 = malloc(sizeof(*dset16)); + dset32 = malloc(sizeof(*dset32)); + dset64 = malloc(sizeof(*dset64)); + dsetdbl = malloc(sizeof(*dsetdbl)); fid = H5Fcreate(FILE74, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); root = H5Gopen2(fid, "/", H5P_DEFAULT); @@ -8873,14 +8945,14 @@ gent_attr_intscalars(void) valu8bits = (uint8_t)~0u; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu8[i][0] = valu8bits; + dsetu8->arr[i][0] = valu8bits; for (j = 1; j < dims[1]; j++) { - dsetu8[i][j] = (uint8_t)(dsetu8[i][j - 1] << 1); + dsetu8->arr[i][j] = (uint8_t)(dsetu8->arr[i][j - 1] << 1); } valu8bits = (uint8_t)(valu8bits << 1); } - H5Awrite(attr, tid, dsetu8[0]); + H5Awrite(attr, tid, dsetu8); H5Sclose(space); H5Aclose(attr); @@ -8893,14 +8965,14 @@ gent_attr_intscalars(void) valu16bits = (uint16_t)~0u; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu16[i][0] = valu16bits; + dsetu16->arr[i][0] = valu16bits; for (j = 1; j < dims[1]; j++) { - dsetu16[i][j] = (uint16_t)(dsetu16[i][j - 1] << 1); + dsetu16->arr[i][j] = (uint16_t)(dsetu16->arr[i][j - 1] << 1); } valu16bits = (uint16_t)(valu16bits << 1); } - H5Awrite(attr, tid, dsetu16[0]); + H5Awrite(attr, tid, dsetu16); H5Sclose(space); H5Aclose(attr); @@ -8913,14 +8985,14 @@ gent_attr_intscalars(void) valu32bits = (uint32_t)~0u; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu32[i][0] = valu32bits; + dsetu32->arr[i][0] = valu32bits; for (j = 1; j < dims[1]; j++) { - dsetu32[i][j] = dsetu32[i][j - 1] << 1; + dsetu32->arr[i][j] = dsetu32->arr[i][j - 1] << 1; } valu32bits <<= 1; } - H5Awrite(attr, tid, dsetu32[0]); + H5Awrite(attr, tid, dsetu32); H5Sclose(space); H5Aclose(attr); @@ -8933,14 +9005,14 @@ gent_attr_intscalars(void) valu64bits = (uint64_t)~0Lu; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu64[i][0] = valu64bits; + dsetu64->arr[i][0] = valu64bits; for (j = 1; j < dims[1]; j++) { - dsetu64[i][j] = dsetu64[i][j - 1] << 1; + dsetu64->arr[i][j] = dsetu64->arr[i][j - 1] << 1; } valu64bits <<= 1; } - H5Awrite(attr, tid, dsetu64[0]); + H5Awrite(attr, tid, dsetu64); H5Sclose(space); H5Aclose(attr); @@ -8953,14 +9025,14 @@ gent_attr_intscalars(void) val8bits = (int8_t)~0; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset8[i][0] = val8bits; + dset8->arr[i][0] = val8bits; for (j = 1; j < dims[1]; j++) { - dset8[i][j] = (int8_t)(dset8[i][j - 1] << 1); + dset8->arr[i][j] = (int8_t)(dset8->arr[i][j - 1] << 1); } val8bits = (int8_t)(val8bits << 1); } - H5Awrite(attr, tid, dset8[0]); + H5Awrite(attr, tid, dset8); H5Sclose(space); H5Aclose(attr); @@ -8973,14 +9045,14 @@ gent_attr_intscalars(void) val16bits = (int16_t)~0; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset16[i][0] = val16bits; + dset16->arr[i][0] = val16bits; for (j = 1; j < dims[1]; j++) { - dset16[i][j] = (int16_t)(dset16[i][j - 1] << 1); + dset16->arr[i][j] = (int16_t)(dset16->arr[i][j - 1] << 1); } val16bits = (int16_t)(val16bits << 1); } - H5Awrite(attr, tid, dset16[0]); + H5Awrite(attr, tid, dset16); H5Sclose(space); H5Aclose(attr); @@ -8993,14 +9065,14 @@ gent_attr_intscalars(void) val32bits = (int32_t)~0; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset32[i][0] = val32bits; + dset32->arr[i][0] = val32bits; for (j = 1; j < dims[1]; j++) { - dset32[i][j] = dset32[i][j - 1] << 1; + dset32->arr[i][j] = dset32->arr[i][j - 1] << 1; } val32bits <<= 1; } - H5Awrite(attr, tid, dset32[0]); + H5Awrite(attr, tid, dset32); H5Sclose(space); H5Aclose(attr); @@ -9013,14 +9085,14 @@ gent_attr_intscalars(void) val64bits = (int64_t)~0L; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset64[i][0] = val64bits; + dset64->arr[i][0] = val64bits; for (j = 1; j < dims[1]; j++) { - dset64[i][j] = dset64[i][j - 1] << 1; + dset64->arr[i][j] = dset64->arr[i][j - 1] << 1; } val64bits <<= 1; } - H5Awrite(attr, tid, dset64[0]); + H5Awrite(attr, tid, dset64); H5Sclose(space); H5Aclose(attr); @@ -9033,9 +9105,9 @@ gent_attr_intscalars(void) for (i = 0; i < dims[0]; i++) for (j = 0; j < dims[1]; j++) - dsetdbl[i][j] = 0.0001F * (float)j + (float)i; + dsetdbl->arr[i][j] = 0.0001 * (double)j + (double)i; - H5Awrite(attr, tid, dsetdbl[0]); + H5Awrite(attr, tid, dsetdbl); H5Sclose(space); H5Aclose(attr); @@ -9236,7 +9308,7 @@ gent_compound_int_array(void) dims[0] = F76_DIM8; for (n = 0; n < (int)dims[0]; n++) - Cmpd1[m].dsetdbl[n] = 0.0001F + (float)n; + Cmpd1[m].dsetdbl[n] = 0.0001 + (double)n; } /* Create the array data type for the 8 bits signed int array */ @@ -9477,8 +9549,8 @@ gent_compound_ints(void) val64bits <<= 1; /* Double Dummy set for failure tests */ - Cmpd1[m].dsetdbl = 0.0001F + (float)m; - Cmpd2[m].dsetdbl = 0.0001F + (float)m; + Cmpd1[m].dsetdbl = 0.0001 + (double)m; + Cmpd2[m].dsetdbl = 0.0001 + (double)m; } /* Create the dataspace */ @@ -9618,15 +9690,33 @@ gent_intattrscalars(void) hid_t tid = H5I_INVALID_HID; hsize_t dims[2]; - uint8_t ** dsetu8 = NULL; - uint16_t **dsetu16 = NULL; - uint32_t **dsetu32 = NULL; - uint64_t **dsetu64 = NULL; - int8_t ** dset8 = NULL; - int16_t ** dset16 = NULL; - int32_t ** dset32 = NULL; - int64_t ** dset64 = NULL; - double ** dsetdbl = NULL; + struct { + uint8_t arr[F73_XDIM][F73_YDIM8]; + } *dsetu8 = NULL; + struct { + uint16_t arr[F73_XDIM][F73_YDIM16]; + } *dsetu16 = NULL; + struct { + uint32_t arr[F73_XDIM][F73_YDIM32]; + } *dsetu32 = NULL; + struct { + uint64_t arr[F73_XDIM][F73_YDIM64]; + } *dsetu64 = NULL; + struct { + int8_t arr[F73_XDIM][F73_YDIM8]; + } *dset8 = NULL; + struct { + int16_t arr[F73_XDIM][F73_YDIM16]; + } *dset16 = NULL; + struct { + int32_t arr[F73_XDIM][F73_YDIM32]; + } *dset32 = NULL; + struct { + int64_t arr[F73_XDIM][F73_YDIM64]; + } *dset64 = NULL; + struct { + double arr[F73_XDIM][F73_YDIM8]; + } *dsetdbl = NULL; uint8_t valu8bits; uint16_t valu16bits; @@ -9640,15 +9730,15 @@ gent_intattrscalars(void) unsigned int i, j; /* Create arrays */ - H5TEST_ALLOCATE_2D_ARRAY(dsetu8, uint8_t, F73_XDIM, F73_YDIM8); - H5TEST_ALLOCATE_2D_ARRAY(dsetu16, uint16_t, F73_XDIM, F73_YDIM16); - H5TEST_ALLOCATE_2D_ARRAY(dsetu32, uint32_t, F73_XDIM, F73_YDIM32); - H5TEST_ALLOCATE_2D_ARRAY(dsetu64, uint64_t, F73_XDIM, F73_YDIM64); - H5TEST_ALLOCATE_2D_ARRAY(dset8, int8_t, F73_XDIM, F73_YDIM8); - H5TEST_ALLOCATE_2D_ARRAY(dset16, int16_t, F73_XDIM, F73_YDIM16); - H5TEST_ALLOCATE_2D_ARRAY(dset32, int32_t, F73_XDIM, F73_YDIM32); - H5TEST_ALLOCATE_2D_ARRAY(dset64, int64_t, F73_XDIM, F73_YDIM64); - H5TEST_ALLOCATE_2D_ARRAY(dsetdbl, double, F73_XDIM, F73_YDIM8); + dsetu8 = malloc(sizeof(*dsetu8)); + dsetu16 = malloc(sizeof(*dsetu16)); + dsetu32 = malloc(sizeof(*dsetu32)); + dsetu64 = malloc(sizeof(*dsetu64)); + dset8 = malloc(sizeof(*dset8)); + dset16 = malloc(sizeof(*dset16)); + dset32 = malloc(sizeof(*dset32)); + dset64 = malloc(sizeof(*dset64)); + dsetdbl = malloc(sizeof(*dsetdbl)); fid = H5Fcreate(FILE78, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); @@ -9661,9 +9751,9 @@ gent_intattrscalars(void) valu8bits = (uint8_t)~0u; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu8[i][0] = valu8bits; + dsetu8->arr[i][0] = valu8bits; for (j = 1; j < dims[1]; j++) { - dsetu8[i][j] = (uint8_t)(dsetu8[i][j - 1] << 1); + dsetu8->arr[i][j] = (uint8_t)(dsetu8->arr[i][j - 1] << 1); } valu8bits = (uint8_t)(valu8bits << 1); } @@ -9671,7 +9761,7 @@ gent_intattrscalars(void) H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu8); /* Attribute of 8 bits unsigned int */ attr = H5Acreate2(dataset, F73_DATASETU08, tid, space, H5P_DEFAULT, H5P_DEFAULT); - H5Awrite(attr, tid, dsetu8[0]); + H5Awrite(attr, tid, dsetu8); H5Aclose(attr); H5Sclose(space); H5Dclose(dataset); @@ -9685,9 +9775,9 @@ gent_intattrscalars(void) valu16bits = (uint16_t)~0u; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu16[i][0] = valu16bits; + dsetu16->arr[i][0] = valu16bits; for (j = 1; j < dims[1]; j++) { - dsetu16[i][j] = (uint16_t)(dsetu16[i][j - 1] << 1); + dsetu16->arr[i][j] = (uint16_t)(dsetu16->arr[i][j - 1] << 1); } valu16bits = (uint16_t)(valu16bits << 1); } @@ -9695,7 +9785,7 @@ gent_intattrscalars(void) H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu16); /* Attribute of 16 bits unsigned int */ attr = H5Acreate2(dataset, F73_DATASETU16, tid, space, H5P_DEFAULT, H5P_DEFAULT); - H5Awrite(attr, tid, dsetu16[0]); + H5Awrite(attr, tid, dsetu16); H5Aclose(attr); H5Sclose(space); H5Dclose(dataset); @@ -9709,9 +9799,9 @@ gent_intattrscalars(void) valu32bits = (uint32_t)~0u; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu32[i][0] = valu32bits; + dsetu32->arr[i][0] = valu32bits; for (j = 1; j < dims[1]; j++) { - dsetu32[i][j] = dsetu32[i][j - 1] << 1; + dsetu32->arr[i][j] = dsetu32->arr[i][j - 1] << 1; } valu32bits <<= 1; } @@ -9719,7 +9809,7 @@ gent_intattrscalars(void) H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu32); /* Attribute of 32 bits unsigned int */ attr = H5Acreate2(dataset, F73_DATASETU32, tid, space, H5P_DEFAULT, H5P_DEFAULT); - H5Awrite(attr, tid, dsetu32[0]); + H5Awrite(attr, tid, dsetu32); H5Aclose(attr); H5Sclose(space); H5Dclose(dataset); @@ -9733,9 +9823,9 @@ gent_intattrscalars(void) valu64bits = (uint64_t)~0Lu; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu64[i][0] = valu64bits; + dsetu64->arr[i][0] = valu64bits; for (j = 1; j < dims[1]; j++) { - dsetu64[i][j] = dsetu64[i][j - 1] << 1; + dsetu64->arr[i][j] = dsetu64->arr[i][j - 1] << 1; } valu64bits <<= 1; } @@ -9743,7 +9833,7 @@ gent_intattrscalars(void) H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu64); /* Attribute of 64 bits unsigned int */ attr = H5Acreate2(dataset, F73_DATASETU64, tid, space, H5P_DEFAULT, H5P_DEFAULT); - H5Awrite(attr, tid, dsetu64[0]); + H5Awrite(attr, tid, dsetu64); H5Aclose(attr); H5Sclose(space); H5Dclose(dataset); @@ -9757,9 +9847,9 @@ gent_intattrscalars(void) val8bits = (int8_t)~0; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset8[i][0] = val8bits; + dset8->arr[i][0] = val8bits; for (j = 1; j < dims[1]; j++) { - dset8[i][j] = (int8_t)(dset8[i][j - 1] << 1); + dset8->arr[i][j] = (int8_t)(dset8->arr[i][j - 1] << 1); } val8bits = (int8_t)(val8bits << 1); } @@ -9767,7 +9857,7 @@ gent_intattrscalars(void) H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset8); /* Attribute of 8 bits signed int */ attr = H5Acreate2(dataset, F73_DATASETS08, tid, space, H5P_DEFAULT, H5P_DEFAULT); - H5Awrite(attr, tid, dset8[0]); + H5Awrite(attr, tid, dset8); H5Aclose(attr); H5Sclose(space); H5Dclose(dataset); @@ -9781,9 +9871,9 @@ gent_intattrscalars(void) val16bits = (int16_t)~0; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset16[i][0] = val16bits; + dset16->arr[i][0] = val16bits; for (j = 1; j < dims[1]; j++) { - dset16[i][j] = (int16_t)(dset16[i][j - 1] << 1); + dset16->arr[i][j] = (int16_t)(dset16->arr[i][j - 1] << 1); } val16bits = (int16_t)(val16bits << 1); } @@ -9791,7 +9881,7 @@ gent_intattrscalars(void) H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset16); /* Attribute of 16 bits signed int */ attr = H5Acreate2(dataset, F73_DATASETS16, tid, space, H5P_DEFAULT, H5P_DEFAULT); - H5Awrite(attr, tid, dset16[0]); + H5Awrite(attr, tid, dset16); H5Aclose(attr); H5Sclose(space); H5Dclose(dataset); @@ -9805,9 +9895,9 @@ gent_intattrscalars(void) val32bits = (int32_t)~0; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset32[i][0] = val32bits; + dset32->arr[i][0] = val32bits; for (j = 1; j < dims[1]; j++) { - dset32[i][j] = dset32[i][j - 1] << 1; + dset32->arr[i][j] = dset32->arr[i][j - 1] << 1; } val32bits <<= 1; } @@ -9815,7 +9905,7 @@ gent_intattrscalars(void) H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset32); /* Attribute of 32 bits signed int */ attr = H5Acreate2(dataset, F73_DATASETS32, tid, space, H5P_DEFAULT, H5P_DEFAULT); - H5Awrite(attr, tid, dset32[0]); + H5Awrite(attr, tid, dset32); H5Aclose(attr); H5Sclose(space); H5Dclose(dataset); @@ -9829,9 +9919,9 @@ gent_intattrscalars(void) val64bits = (int64_t)~0L; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset64[i][0] = val64bits; + dset64->arr[i][0] = val64bits; for (j = 1; j < dims[1]; j++) { - dset64[i][j] = dset64[i][j - 1] << 1; + dset64->arr[i][j] = dset64->arr[i][j - 1] << 1; } val64bits <<= 1; } @@ -9839,7 +9929,7 @@ gent_intattrscalars(void) H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset64); /* Attribute of 64 bits signed int */ attr = H5Acreate2(dataset, F73_DATASETS64, tid, space, H5P_DEFAULT, H5P_DEFAULT); - H5Awrite(attr, tid, dset64[0]); + H5Awrite(attr, tid, dset64); H5Aclose(attr); H5Sclose(space); H5Dclose(dataset); @@ -9853,12 +9943,12 @@ gent_intattrscalars(void) for (i = 0; i < dims[0]; i++) for (j = 0; j < dims[1]; j++) - dsetdbl[i][j] = 0.0001F * (float)j + (float)i; + dsetdbl->arr[i][j] = 0.0001 * (double)j + (double)i; H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetdbl); /* Attribute of double */ attr = H5Acreate2(dataset, F73_DUMMYDBL, tid, space, H5P_DEFAULT, H5P_DEFAULT); - H5Awrite(attr, tid, dsetdbl[0]); + H5Awrite(attr, tid, dsetdbl); H5Aclose(attr); H5Sclose(space); @@ -9896,15 +9986,33 @@ gent_intsattrs(void) hid_t aspace = H5I_INVALID_HID; hsize_t dims[2], adims[1]; - uint8_t ** dsetu8 = NULL; - uint16_t **dsetu16 = NULL; - uint32_t **dsetu32 = NULL; - uint64_t **dsetu64 = NULL; - int8_t ** dset8 = NULL; - int16_t ** dset16 = NULL; - int32_t ** dset32 = NULL; - int64_t ** dset64 = NULL; - double ** dsetdbl = NULL; + struct { + uint8_t arr[F66_XDIM][F66_YDIM8]; + } * dsetu8; + struct { + uint16_t arr[F66_XDIM][F66_YDIM16]; + } * dsetu16; + struct { + uint32_t arr[F66_XDIM][F66_YDIM32]; + } * dsetu32; + struct { + uint64_t arr[F66_XDIM][F66_YDIM64]; + } * dsetu64; + struct { + int8_t arr[F66_XDIM][F66_YDIM8]; + } * dset8; + struct { + int16_t arr[F66_XDIM][F66_YDIM16]; + } * dset16; + struct { + int32_t arr[F66_XDIM][F66_YDIM32]; + } * dset32; + struct { + int64_t arr[F66_XDIM][F66_YDIM64]; + } * dset64; + struct { + double arr[F66_XDIM][F66_YDIM8]; + } * dsetdbl; uint8_t * asetu8 = NULL; uint16_t *asetu16 = NULL; @@ -9928,15 +10036,15 @@ gent_intsattrs(void) unsigned int i, j; /* Create arrays */ - H5TEST_ALLOCATE_2D_ARRAY(dsetu8, uint8_t, F66_XDIM, F66_YDIM8); - H5TEST_ALLOCATE_2D_ARRAY(dsetu16, uint16_t, F66_XDIM, F66_YDIM16); - H5TEST_ALLOCATE_2D_ARRAY(dsetu32, uint32_t, F66_XDIM, F66_YDIM32); - H5TEST_ALLOCATE_2D_ARRAY(dsetu64, uint64_t, F66_XDIM, F66_YDIM64); - H5TEST_ALLOCATE_2D_ARRAY(dset8, int8_t, F66_XDIM, F66_YDIM8); - H5TEST_ALLOCATE_2D_ARRAY(dset16, int16_t, F66_XDIM, F66_YDIM16); - H5TEST_ALLOCATE_2D_ARRAY(dset32, int32_t, F66_XDIM, F66_YDIM32); - H5TEST_ALLOCATE_2D_ARRAY(dset64, int64_t, F66_XDIM, F66_YDIM64); - H5TEST_ALLOCATE_2D_ARRAY(dsetdbl, double, F66_XDIM, F66_YDIM8); + dsetu8 = malloc(sizeof(*dsetu8)); + dsetu16 = malloc(sizeof(*dsetu16)); + dsetu32 = malloc(sizeof(*dsetu32)); + dsetu64 = malloc(sizeof(*dsetu64)); + dset8 = malloc(sizeof(*dset8)); + dset16 = malloc(sizeof(*dset16)); + dset32 = malloc(sizeof(*dset32)); + dset64 = malloc(sizeof(*dset64)); + dsetdbl = malloc(sizeof(*dsetdbl)); asetu8 = HDcalloc(F66_XDIM * F66_YDIM8, sizeof(uint8_t)); asetu16 = HDcalloc(F66_XDIM * F66_YDIM16, sizeof(uint16_t)); @@ -9958,16 +10066,16 @@ gent_intsattrs(void) valu8bits = (uint8_t)~0u; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu8[i][0] = valu8bits; - asetu8[i * dims[1]] = dsetu8[i][0]; + dsetu8->arr[i][0] = valu8bits; + asetu8[i * dims[1]] = dsetu8->arr[i][0]; for (j = 1; j < dims[1]; j++) { - dsetu8[i][j] = (uint8_t)(dsetu8[i][j - 1] << 1); - asetu8[i * dims[1] + j] = dsetu8[i][j]; + dsetu8->arr[i][j] = (uint8_t)(dsetu8->arr[i][j - 1] << 1); + asetu8[i * dims[1] + j] = dsetu8->arr[i][j]; } valu8bits = (uint8_t)(valu8bits << 1); } - H5Dwrite(dataset, H5T_NATIVE_UINT8, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu8[0]); + H5Dwrite(dataset, H5T_NATIVE_UINT8, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu8); /* Attribute of 8 bits unsigned int */ adims[0] = F66_XDIM * F66_YDIM8; aspace = H5Screate_simple(1, adims, NULL); @@ -9986,16 +10094,16 @@ gent_intsattrs(void) valu16bits = (uint16_t)~0u; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu16[i][0] = valu16bits; - asetu16[i * dims[1]] = dsetu16[i][0]; + dsetu16->arr[i][0] = valu16bits; + asetu16[i * dims[1]] = dsetu16->arr[i][0]; for (j = 1; j < dims[1]; j++) { - dsetu16[i][j] = (uint16_t)(dsetu16[i][j - 1] << 1); - asetu16[i * dims[1] + j] = dsetu16[i][j]; + dsetu16->arr[i][j] = (uint16_t)(dsetu16->arr[i][j - 1] << 1); + asetu16[i * dims[1] + j] = dsetu16->arr[i][j]; } valu16bits = (uint16_t)(valu16bits << 1); } - H5Dwrite(dataset, H5T_NATIVE_UINT16, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu16[0]); + H5Dwrite(dataset, H5T_NATIVE_UINT16, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu16); /* Attribute of 16 bits unsigned int */ adims[0] = F66_XDIM * F66_YDIM16; aspace = H5Screate_simple(1, adims, NULL); @@ -10014,16 +10122,16 @@ gent_intsattrs(void) valu32bits = (uint32_t)~0u; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu32[i][0] = valu32bits; - asetu32[i * dims[1]] = dsetu32[i][0]; + dsetu32->arr[i][0] = valu32bits; + asetu32[i * dims[1]] = dsetu32->arr[i][0]; for (j = 1; j < dims[1]; j++) { - dsetu32[i][j] = dsetu32[i][j - 1] << 1; - asetu32[i * dims[1] + j] = dsetu32[i][j]; + dsetu32->arr[i][j] = dsetu32->arr[i][j - 1] << 1; + asetu32[i * dims[1] + j] = dsetu32->arr[i][j]; } valu32bits <<= 1; } - H5Dwrite(dataset, H5T_NATIVE_UINT32, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu32[0]); + H5Dwrite(dataset, H5T_NATIVE_UINT32, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu32); /* Attribute of 32 bits unsigned int */ adims[0] = F66_XDIM * F66_YDIM32; aspace = H5Screate_simple(1, adims, NULL); @@ -10042,16 +10150,16 @@ gent_intsattrs(void) valu64bits = (uint64_t)~0Lu; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dsetu64[i][0] = valu64bits; - asetu64[i * dims[1]] = dsetu64[i][0]; + dsetu64->arr[i][0] = valu64bits; + asetu64[i * dims[1]] = dsetu64->arr[i][0]; for (j = 1; j < dims[1]; j++) { - dsetu64[i][j] = dsetu64[i][j - 1] << 1; - asetu64[i * dims[1] + j] = dsetu64[i][j]; + dsetu64->arr[i][j] = dsetu64->arr[i][j - 1] << 1; + asetu64[i * dims[1] + j] = dsetu64->arr[i][j]; } valu64bits <<= 1; } - H5Dwrite(dataset, H5T_NATIVE_UINT64, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu64[0]); + H5Dwrite(dataset, H5T_NATIVE_UINT64, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu64); /* Attribute of 64 bits unsigned int */ adims[0] = F66_XDIM * F66_YDIM64; aspace = H5Screate_simple(1, adims, NULL); @@ -10070,16 +10178,16 @@ gent_intsattrs(void) val8bits = (int8_t)~0; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset8[i][0] = val8bits; - aset8[i * dims[1]] = dset8[i][0]; + dset8->arr[i][0] = val8bits; + aset8[i * dims[1]] = dset8->arr[i][0]; for (j = 1; j < dims[1]; j++) { - dset8[i][j] = (int8_t)(dset8[i][j - 1] << 1); - aset8[i * dims[1] + j] = dset8[i][j]; + dset8->arr[i][j] = (int8_t)(dset8->arr[i][j - 1] << 1); + aset8[i * dims[1] + j] = dset8->arr[i][j]; } val8bits = (int8_t)(val8bits << 1); } - H5Dwrite(dataset, H5T_NATIVE_INT8, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset8[0]); + H5Dwrite(dataset, H5T_NATIVE_INT8, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset8); /* Attribute of 8 bits signed int */ adims[0] = F66_XDIM * F66_YDIM8; aspace = H5Screate_simple(1, adims, NULL); @@ -10098,16 +10206,16 @@ gent_intsattrs(void) val16bits = (int16_t)~0; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset16[i][0] = val16bits; - aset16[i * dims[1]] = dset16[i][0]; + dset16->arr[i][0] = val16bits; + aset16[i * dims[1]] = dset16->arr[i][0]; for (j = 1; j < dims[1]; j++) { - dset16[i][j] = (int16_t)(dset16[i][j - 1] << 1); - aset16[i * dims[1] + j] = dset16[i][j]; + dset16->arr[i][j] = (int16_t)(dset16->arr[i][j - 1] << 1); + aset16[i * dims[1] + j] = dset16->arr[i][j]; } val16bits = (int16_t)(val16bits << 1); } - H5Dwrite(dataset, H5T_NATIVE_INT16, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset16[0]); + H5Dwrite(dataset, H5T_NATIVE_INT16, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset16); /* Attribute of 16 bits signed int */ adims[0] = F66_XDIM * F66_YDIM16; aspace = H5Screate_simple(1, adims, NULL); @@ -10126,16 +10234,16 @@ gent_intsattrs(void) val32bits = (int32_t)~0; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset32[i][0] = val32bits; - aset32[i * dims[1]] = dset32[i][0]; + dset32->arr[i][0] = val32bits; + aset32[i * dims[1]] = dset32->arr[i][0]; for (j = 1; j < dims[1]; j++) { - dset32[i][j] = dset32[i][j - 1] << 1; - aset32[i * dims[1] + j] = dset32[i][j]; + dset32->arr[i][j] = dset32->arr[i][j - 1] << 1; + aset32[i * dims[1] + j] = dset32->arr[i][j]; } val32bits <<= 1; } - H5Dwrite(dataset, H5T_NATIVE_INT32, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset32[0]); + H5Dwrite(dataset, H5T_NATIVE_INT32, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset32); /* Attribute of 32 bits signed int */ adims[0] = F66_XDIM * F66_YDIM32; aspace = H5Screate_simple(1, adims, NULL); @@ -10154,16 +10262,16 @@ gent_intsattrs(void) val64bits = (int64_t)~0L; /* all 1s */ for (i = 0; i < dims[0]; i++) { - dset64[i][0] = val64bits; - aset64[i * dims[1]] = dset64[i][0]; + dset64->arr[i][0] = val64bits; + aset64[i * dims[1]] = dset64->arr[i][0]; for (j = 1; j < dims[1]; j++) { - dset64[i][j] = dset64[i][j - 1] << 1; - aset64[i * dims[1] + j] = dset64[i][j]; + dset64->arr[i][j] = dset64->arr[i][j - 1] << 1; + aset64[i * dims[1] + j] = dset64->arr[i][j]; } val64bits <<= 1; } - H5Dwrite(dataset, H5T_NATIVE_INT64, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset64[0]); + H5Dwrite(dataset, H5T_NATIVE_INT64, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset64); /* Attribute of 64 bits signed int */ adims[0] = F66_XDIM * F66_YDIM64; aspace = H5Screate_simple(1, adims, NULL); @@ -10182,11 +10290,11 @@ gent_intsattrs(void) for (i = 0; i < dims[0]; i++) for (j = 0; j < dims[1]; j++) { - dsetdbl[i][j] = 0.0001F * (float)j + (float)i; - asetdbl[i * dims[1] + j] = dsetdbl[i][j]; + dsetdbl->arr[i][j] = 0.0001 * (double)j + (double)i; + asetdbl[i * dims[1] + j] = dsetdbl->arr[i][j]; } - H5Dwrite(dataset, H5T_NATIVE_DOUBLE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetdbl[0]); + H5Dwrite(dataset, H5T_NATIVE_DOUBLE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetdbl); /* Attribute of double */ adims[0] = F66_XDIM * F66_YDIM8; aspace = H5Screate_simple(1, adims, NULL); @@ -10238,9 +10346,15 @@ gent_floatsattrs(void) hid_t aspace = H5I_INVALID_HID; hsize_t dims[2], adims[1]; - float ** dset32 = NULL; - double ** dset64 = NULL; - long double **dset128 = NULL; + struct { + float arr[F89_XDIM][F89_YDIM32]; + } * dset32; + struct { + double arr[F89_XDIM][F89_YDIM64]; + } * dset64; + struct { + long double arr[F89_XDIM][F89_YDIM128]; + } * dset128; float * aset32 = NULL; double * aset64 = NULL; @@ -10253,9 +10367,9 @@ gent_floatsattrs(void) unsigned int i, j; /* Create arrays */ - H5TEST_ALLOCATE_2D_ARRAY(dset32, float, F89_XDIM, F89_YDIM32); - H5TEST_ALLOCATE_2D_ARRAY(dset64, double, F89_XDIM, F89_YDIM64); - H5TEST_ALLOCATE_2D_ARRAY(dset128, long double, F89_XDIM, F89_YDIM128); + dset32 = malloc(sizeof(*dset32)); + dset64 = malloc(sizeof(*dset64)); + dset128 = malloc(sizeof(*dset128)); aset32 = HDcalloc(F89_XDIM * F89_YDIM32, sizeof(float)); aset64 = HDcalloc(F89_XDIM * F89_YDIM64, sizeof(double)); @@ -10277,16 +10391,16 @@ gent_floatsattrs(void) val32bits = (float)F89_YDIM32; for (i = 0; i < dims[0]; i++) { - dset32[i][0] = val32bits; - aset32[i * dims[1]] = dset32[i][0]; + dset32->arr[i][0] = val32bits; + aset32[i * dims[1]] = dset32->arr[i][0]; for (j = 1; j < dims[1]; j++) { - dset32[i][j] = (float)(j * dims[0] + i) / (float)F89_YDIM32; - aset32[i * dims[1] + j] = dset32[i][j]; + dset32->arr[i][j] = (float)(j * dims[0] + i) / (float)F89_YDIM32; + aset32[i * dims[1] + j] = dset32->arr[i][j]; } val32bits -= (float)1; } - H5Dwrite(dataset, H5T_IEEE_F32LE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset32[0]); + H5Dwrite(dataset, H5T_IEEE_F32LE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset32); /* Attribute of 32 bits float */ adims[0] = F89_XDIM * F89_YDIM32; aspace = H5Screate_simple(1, adims, NULL); @@ -10305,16 +10419,16 @@ gent_floatsattrs(void) val64bits = (double)F89_YDIM64; for (i = 0; i < dims[0]; i++) { - dset64[i][0] = val64bits; - aset64[i * dims[1]] = dset64[i][0]; + dset64->arr[i][0] = val64bits; + aset64[i * dims[1]] = dset64->arr[i][0]; for (j = 1; j < dims[1]; j++) { - dset64[i][j] = (double)(j * dims[0] + i) / (double)F89_YDIM64; - aset64[i * dims[1] + j] = dset64[i][j]; + dset64->arr[i][j] = (double)(j * dims[0] + i) / (double)F89_YDIM64; + aset64[i * dims[1] + j] = dset64->arr[i][j]; } val64bits -= (double)1; } - H5Dwrite(dataset, H5T_IEEE_F64LE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset64[0]); + H5Dwrite(dataset, H5T_IEEE_F64LE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset64); /* Attribute of 64 bits double */ adims[0] = F89_XDIM * F89_YDIM64; aspace = H5Screate_simple(1, adims, NULL); @@ -10333,16 +10447,16 @@ gent_floatsattrs(void) val128bits = (long double)F89_YDIM128; for (i = 0; i < dims[0]; i++) { - dset128[i][0] = val128bits; - aset128[i * dims[1]] = dset128[i][0]; + dset128->arr[i][0] = val128bits; + aset128[i * dims[1]] = dset128->arr[i][0]; for (j = 1; j < dims[1]; j++) { - dset128[i][j] = (long double)(j * dims[0] + i) / (long double)F89_YDIM128; - aset128[i * dims[1] + j] = dset128[i][j]; + dset128->arr[i][j] = (long double)(j * dims[0] + i) / (long double)F89_YDIM128; + aset128[i * dims[1] + j] = dset128->arr[i][j]; } val128bits -= (long double)1; } - H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset128[0]); + H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset128); /* Attribute of 128 bits long double */ adims[0] = F89_XDIM * F89_YDIM128; aspace = H5Screate_simple(1, adims, NULL); @@ -10534,13 +10648,17 @@ gent_bitnopaquefields(void) static void gent_intsfourdims(void) { - hid_t fid, dataset, space; - hsize_t dims[F81_RANK]; - uint32_t dset1[F81_ZDIM][F81_YDIM][F81_XDIM][F81_WDIM]; + hid_t fid, dataset, space; + hsize_t dims[F81_RANK]; + struct { + uint32_t arr[F81_ZDIM][F81_YDIM][F81_XDIM][F81_WDIM]; + } * dset1; unsigned int i, j, k, l; fid = H5Fcreate(FILE81, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); + dset1 = malloc(sizeof(*dset1)); + /* Dataset of 32 bits unsigned int */ dims[0] = F81_ZDIM; dims[1] = F81_YDIM; @@ -10553,7 +10671,7 @@ gent_intsfourdims(void) for (j = 0; j < F81_YDIM; j++) for (k = 0; k < F81_XDIM; k++) for (l = 0; l < F81_WDIM; l++) - dset1[i][j][k][l] = + dset1->arr[i][j][k][l] = i * F81_YDIM * F81_XDIM * F81_WDIM + j * F81_XDIM * F81_WDIM + k * F81_WDIM + l; H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset1); @@ -10561,6 +10679,7 @@ gent_intsfourdims(void) H5Dclose(dataset); H5Fclose(fid); + free(dset1); } /*------------------------------------------------------------------------- diff --git a/tools/test/h5dump/testh5dump.sh.in b/tools/test/h5dump/testh5dump.sh.in index 9464302..f9f3734 100644 --- a/tools/test/h5dump/testh5dump.sh.in +++ b/tools/test/h5dump/testh5dump.sh.in @@ -1171,7 +1171,7 @@ TOOLTEST tcomp-1.ddl --enable-error-stack tcompound.h5 # test for named data types TOOLTEST tcomp-2.ddl --enable-error-stack -t /type1 --datatype /type2 --datatype=/group1/type3 tcompound.h5 TOOLTEST tcomp-2.ddl --enable-error-stack -N /type1 --any_path /type2 --any_path=/group1/type3 tcompound.h5 -# test for unamed type +# test for unnamed type TOOLTEST4 tcomp-3.ddl --enable-error-stack -t /#6632 -g /group2 tcompound.h5 # test complicated compound datatype TOOLTEST tcomp-4.ddl --enable-error-stack tcompound_complex.h5 diff --git a/tools/test/h5dump/testh5dumppbits.sh.in b/tools/test/h5dump/testh5dumppbits.sh.in index 6689749..eaf91fd 100644 --- a/tools/test/h5dump/testh5dumppbits.sh.in +++ b/tools/test/h5dump/testh5dumppbits.sh.in @@ -516,7 +516,7 @@ TOOLTEST tnofilename-with-packed-bits.ddl --enable-error-stack # Limits: # Maximum number of packed bits is 8 (for now). # Maximum integer size is 64 (for now). -# Maximun Offset is 63 (Maximum size - 1). +# Maximum Offset is 63 (Maximum size - 1). # Maximum Offset+Length is 64 (Maximum size). # Tests: # Normal operation on both signed and unsigned int datasets. diff --git a/tools/test/h5format_convert/h5fc_gentest.c b/tools/test/h5format_convert/h5fc_gentest.c index 09cca45..ccb64b5 100644 --- a/tools/test/h5format_convert/h5fc_gentest.c +++ b/tools/test/h5format_convert/h5fc_gentest.c @@ -381,7 +381,7 @@ error: /* * Function: gen_err_level() * - * Generate a file to test the situtation described in HDFFV-9434: + * Generate a file to test the situation described in HDFFV-9434: * Exceed the limit of v1-btree level * * Create a file with H5Pset_istore_k(fcpl, 1). diff --git a/tools/test/h5format_convert/testh5fc.sh.in b/tools/test/h5format_convert/testh5fc.sh.in index 762f43d..df083d1 100644 --- a/tools/test/h5format_convert/testh5fc.sh.in +++ b/tools/test/h5format_convert/testh5fc.sh.in @@ -313,7 +313,7 @@ TOOLTEST_MASK_OUT() { $RM $actual $actual_err $actual_sav $actual_err_sav fi } -# Same as TOOLTEST_OUT except only compares error outout +# Same as TOOLTEST_OUT except only compares error output TOOLTEST_ERR() { # Prepare expected and actual output expect="$TESTDIR/$1" diff --git a/tools/test/h5jam/getub.c b/tools/test/h5jam/getub.c index fd21d6c..4e67e98 100644 --- a/tools/test/h5jam/getub.c +++ b/tools/test/h5jam/getub.c @@ -15,7 +15,7 @@ #include "h5tools.h" #include "h5tools_utils.h" -void parse_command_line(int argc, const char *argv[]); +void parse_command_line(int argc, const char *const *argv); /* Name of tool */ #define PROGRAM_NAME "getub" @@ -52,7 +52,7 @@ usage(const char *prog) *------------------------------------------------------------------------- */ void -parse_command_line(int argc, const char *argv[]) +parse_command_line(int argc, const char *const *argv) { int opt; @@ -77,7 +77,7 @@ parse_command_line(int argc, const char *argv[]) } /* end parse_command_line() */ int -main(int argc, const char *argv[]) +main(int argc, char *argv[]) { int fd = H5I_INVALID_HID; unsigned size; @@ -91,7 +91,7 @@ main(int argc, const char *argv[]) /* Initialize h5tools lib */ h5tools_init(); - parse_command_line(argc, argv); + parse_command_line(argc, (const char *const *)argv); if (NULL == nbytes) { /* missing arg */ diff --git a/tools/test/h5jam/tellub.c b/tools/test/h5jam/tellub.c index e6769ec..f264d9b 100644 --- a/tools/test/h5jam/tellub.c +++ b/tools/test/h5jam/tellub.c @@ -56,7 +56,7 @@ usage(const char *prog) */ static void -parse_command_line(int argc, const char *argv[]) +parse_command_line(int argc, const char *const *argv) { int opt; @@ -98,7 +98,7 @@ leave(int ret) *------------------------------------------------------------------------- */ int -main(int argc, const char *argv[]) +main(int argc, char *argv[]) { char * ifname; hid_t ifile = H5I_INVALID_HID; @@ -113,7 +113,7 @@ main(int argc, const char *argv[]) /* Initialize h5tools lib */ h5tools_init(); - parse_command_line(argc, argv); + parse_command_line(argc, (const char *const *)argv); /* enable error reporting if command line option */ h5tools_error_report(); diff --git a/tools/test/h5jam/testh5jam.sh.in b/tools/test/h5jam/testh5jam.sh.in index caa3416..191fef0 100644 --- a/tools/test/h5jam/testh5jam.sh.in +++ b/tools/test/h5jam/testh5jam.sh.in @@ -345,7 +345,7 @@ CHECK_NOUB() { # JAMTEST user_block file.h5 [--clobber] [ofile.h5] # # Test the 'jam' tool: -# 1. figure out the input and output, and the comparision +# 1. figure out the input and output, and the comparison # that will be done. # 2. call 'jam' with the appropriate arguments # 3. check the user block is correct in the output (Check_UB) diff --git a/tools/test/h5ls/h5ls_plugin.sh.in b/tools/test/h5ls/h5ls_plugin.sh.in index 29e982d..0077b07 100644 --- a/tools/test/h5ls/h5ls_plugin.sh.in +++ b/tools/test/h5ls/h5ls_plugin.sh.in @@ -166,7 +166,7 @@ VERIFY() { # the `nerrors' global variable and (if $verbose is set) display up to $NLINS # lines of the actual output from the tool test. The actual output is not # removed if $HDF5_NOCLEANUP has a non-zero value. -# Arguemnts: +# Arguments: # $1 -- actual output filename to use # $2 and on -- argument for the h5ls tool TOOLTEST() { diff --git a/tools/test/h5ls/testh5ls.sh.in b/tools/test/h5ls/testh5ls.sh.in index ee0dad7..36583da 100644 --- a/tools/test/h5ls/testh5ls.sh.in +++ b/tools/test/h5ls/testh5ls.sh.in @@ -164,7 +164,7 @@ $SRC_H5LS_TESTFILES/tdset_idx.ls # RUNSERIAL is used. Check if it can return exit code from executalbe correctly. if [ -n "$RUNSERIAL_NOEXITCODE" ]; then - echo "***Warning*** Serial Exit Code is not passed back to shell corretly." + echo "***Warning*** Serial Exit Code is not passed back to shell correctly." echo "***Warning*** Exit code checking is skipped." h5haveexitcode=no fi @@ -230,7 +230,7 @@ TESTING() { # the `nerrors' global variable and (if $verbose is set) display up to $NLINS # lines of the actual output from the tool test. The actual output is not # removed if $HDF5_NOCLEANUP has a non-zero value. -# Arguemnts: +# Arguments: # $1 -- actual output filename to use # $2 and on -- argument for the h5ls tool TOOLTEST() { diff --git a/tools/test/h5ls/testh5lsvds.sh.in b/tools/test/h5ls/testh5lsvds.sh.in index 4814f85..ab2d137 100644 --- a/tools/test/h5ls/testh5lsvds.sh.in +++ b/tools/test/h5ls/testh5lsvds.sh.in @@ -103,7 +103,7 @@ $SRC_H5LS_TESTFILES/vds/tvds-5.ls # RUNSERIAL is used. Check if it can return exit code from executalbe correctly. if [ -n "$RUNSERIAL_NOEXITCODE" ]; then - echo "***Warning*** Serial Exit Code is not passed back to shell corretly." + echo "***Warning*** Serial Exit Code is not passed back to shell correctly." echo "***Warning*** Exit code checking is skipped." h5haveexitcode=no fi @@ -169,7 +169,7 @@ TESTING() { # the `nerrors' global variable and (if $verbose is set) display up to $NLINS # lines of the actual output from the tool test. The actual output is not # removed if $HDF5_NOCLEANUP has a non-zero value. -# Arguemnts: +# Arguments: # $1 -- actual output filename to use # $2 and on -- argument for the h5ls tool TOOLTEST() { diff --git a/tools/test/h5repack/CMakeTests.cmake b/tools/test/h5repack/CMakeTests.cmake index 397c3ac..09648ff 100644 --- a/tools/test/h5repack/CMakeTests.cmake +++ b/tools/test/h5repack/CMakeTests.cmake @@ -1541,7 +1541,7 @@ ADD_H5_TEST (bug1814 "TEST" ${FILE_REF}) # test attribute with various references (bug1797 / HDFFV-5932) -# the references in attribute of compund or vlen datatype +# the references in attribute of compound or vlen datatype ADD_H5_TEST (HDFFV-5932 "TEST" ${FILE_ATTR_REF}) # Add test for memory leak in attribute. This test is verified by CTEST. diff --git a/tools/test/h5repack/CMakeVFDTests.cmake b/tools/test/h5repack/CMakeVFDTests.cmake index e26941b..f8ac10b 100644 --- a/tools/test/h5repack/CMakeVFDTests.cmake +++ b/tools/test/h5repack/CMakeVFDTests.cmake @@ -15,20 +15,7 @@ ### T E S T I N G ### ############################################################################## ############################################################################## - -set (VFD_LIST - sec2 - stdio - core - core_paged - split - multi - family -) - -if (H5_HAVE_DIRECT) - set (VFD_LIST ${VFD_LIST} direct) -endif () +H5_CREATE_VFD_DIR() ############################################################################## ############################################################################## @@ -38,7 +25,6 @@ endif () macro (ADD_VFD_TEST vfdname resultcode) if (NOT HDF5_ENABLE_USING_MEMCHECKER) - file (MAKE_DIRECTORY "${PROJECT_BINARY_DIR}/${vfdname}") add_test ( NAME H5REPACK-${vfdname}-h5repacktest-clear-objects COMMAND ${CMAKE_COMMAND} -E remove diff --git a/tools/test/h5repack/dynlib_rpk.c b/tools/test/h5repack/dynlib_rpk.c index b228344..bef032a 100644 --- a/tools/test/h5repack/dynlib_rpk.c +++ b/tools/test/h5repack/dynlib_rpk.c @@ -83,7 +83,7 @@ H5Z_filter_dynlib1(unsigned int flags, size_t cd_nelmts, const unsigned int *cd_ add_on = (int)cd_values[0]; if (flags & H5Z_FLAG_REVERSE) { /*read*/ - /* Substract the "add on" value to all the data values */ + /* Subtract the "add on" value to all the data values */ while (buf_left > 0) { *int_ptr++ -= add_on; buf_left -= sizeof(int); diff --git a/tools/test/h5repack/dynlib_vrpk.c b/tools/test/h5repack/dynlib_vrpk.c index 5eac4f2..a45de65 100644 --- a/tools/test/h5repack/dynlib_vrpk.c +++ b/tools/test/h5repack/dynlib_vrpk.c @@ -91,7 +91,7 @@ H5Z_filter_dynlib4(unsigned int flags, size_t cd_nelmts, const unsigned int *cd_ add_on = (int)cd_values[0]; if (flags & H5Z_FLAG_REVERSE) { /*read*/ - /* Substract the "add on" value to all the data values */ + /* Subtract the "add on" value to all the data values */ while (buf_left > 0) { *int_ptr++ -= add_on; buf_left -= sizeof(int); diff --git a/tools/test/h5repack/h5repack.sh.in b/tools/test/h5repack/h5repack.sh.in index 1e54670..a241ea8 100644 --- a/tools/test/h5repack/h5repack.sh.in +++ b/tools/test/h5repack/h5repack.sh.in @@ -525,7 +525,7 @@ VERIFY_LAYOUT_ALL() #--------------------------------- # check the layout from a dataset - # check if the other layouts still exsit + # check if the other layouts still exist VERIFY "layouts" ( cd $TESTDIR @@ -1713,10 +1713,10 @@ TOOLTEST1 family tfamily%05d.h5 TOOLTEST bug1814 h5repack_refs.h5 # test attribute with various references (bug1797 / HDFFV-5932) -# the references in attribute of compund or vlen datatype +# the references in attribute of compound or vlen datatype TOOLTEST HDFFV-5932 h5repack_attr_refs.h5 -# Add test for memory leak in attirbute. This test is verified by CTEST. +# Add test for memory leak in attribute. This test is verified by CTEST. # 1. leak from vlen string # 2. leak from compound type without reference member # (HDFFV-7840, ) diff --git a/tools/test/h5repack/h5repackgentest.c b/tools/test/h5repack/h5repackgentest.c index 576b1c7..c025891 100644 --- a/tools/test/h5repack/h5repackgentest.c +++ b/tools/test/h5repack/h5repackgentest.c @@ -27,9 +27,9 @@ * There is no restriction on the name, number, or structure of datasets and * groups in HDF5 file. * - * The inluded datatypes should be more than adequate to verify the correctness + * The included datatypes should be more than adequate to verify the correctness * of the behavior -- if one type can be consolidated from external storage, - * then thay all can. + * then they all can. */ #include "hdf5.h" @@ -307,7 +307,7 @@ generate_f32le(hbool_t external) /* Generate values */ for (i = 0, k = 0, n = 0; (hsize_t)i < dims[0]; i++) { for (j = 0; (hsize_t)j < dims[1]; j++, k++, n++) { - wdata[k] = n * 801.1f * ((k % 5 == 1) ? (-1) : (1)); + wdata[k] = n * 801.1F * ((k % 5 == 1) ? (-1) : (1)); } } diff --git a/tools/test/h5repack/h5repacktst.c b/tools/test/h5repack/h5repacktst.c index b62fa53..e7cc21a 100644 --- a/tools/test/h5repack/h5repacktst.c +++ b/tools/test/h5repack/h5repacktst.c @@ -624,7 +624,7 @@ main(void) SKIPPED(); #endif - TESTING(" addding shuffle filter"); + TESTING(" adding shuffle filter"); /*------------------------------------------------------------------------- * test an individual object option @@ -653,7 +653,7 @@ main(void) *------------------------------------------------------------------------- */ - TESTING(" addding shuffle filter to all"); + TESTING(" adding shuffle filter to all"); if (h5repack_init(&pack_options, 0, FALSE) < 0) GOERROR; @@ -1592,17 +1592,17 @@ main(void) #endif /*------------------------------------------------------------------------- - * test file with aligment + * test file with alignment *------------------------------------------------------------------------- */ - TESTING(" file with aligment"); + TESTING(" file with alignment"); #ifdef H5_HAVE_FILTER_DEFLATE if (h5repack_init(&pack_options, 0, FALSE) < 0) GOERROR; - /* add the options for aligment */ + /* add the options for alignment */ pack_options.alignment = 1; pack_options.threshold = 1; @@ -1613,7 +1613,7 @@ main(void) if (h5repack_verify(FNAME8, FNAME8OUT, &pack_options) <= 0) GOERROR; - /* verify aligment */ + /* verify alignment */ { hsize_t threshold; hsize_t alignment; @@ -2432,14 +2432,15 @@ make_szip(hid_t loc_id) unsigned szip_pixels_per_block = 8; hsize_t dims[RANK] = {DIM1, DIM2}; hsize_t chunk_dims[RANK] = {CDIM1, CDIM2}; - int ** buf = NULL; int szip_can_encode = 0; /* Create and fill array */ - H5TEST_ALLOCATE_2D_ARRAY(buf, int, DIM1, DIM2); + struct { + int arr[DIM1][DIM2]; + } *buf = malloc(sizeof(*buf)); if (NULL == buf) goto error; - H5TEST_FILL_2D_ARRAY(buf, int, DIM1, DIM2); + H5TEST_FILL_2D_HEAP_ARRAY(buf, int); /* create a space */ if ((sid = H5Screate_simple(RANK, dims, NULL)) < 0) @@ -2463,7 +2464,7 @@ make_szip(hid_t loc_id) /* set szip data */ if (H5Pset_szip(dcpl, szip_options_mask, szip_pixels_per_block) < 0) goto error; - if (make_dset(loc_id, "dset_szip", sid, dcpl, buf[0]) < 0) + if (make_dset(loc_id, "dset_szip", sid, dcpl, buf) < 0) goto error; } else @@ -2506,15 +2507,16 @@ make_deflate(hid_t loc_id) hid_t sid = H5I_INVALID_HID; /* dataspace ID */ hsize_t dims[RANK] = {DIM1, DIM2}; hsize_t chunk_dims[RANK] = {CDIM1, CDIM2}; - int ** buf = NULL; hobj_ref_t bufref[1]; /* reference */ hsize_t dims1r[1] = {1}; /* Create and fill array */ - H5TEST_ALLOCATE_2D_ARRAY(buf, int, DIM1, DIM2); + struct { + int arr[DIM1][DIM2]; + } *buf = malloc(sizeof(*buf)); if (NULL == buf) goto error; - H5TEST_FILL_2D_ARRAY(buf, int, DIM1, DIM2); + H5TEST_FILL_2D_HEAP_ARRAY(buf, int); /* create a space */ if ((sid = H5Screate_simple(RANK, dims, NULL)) < 0) @@ -2534,7 +2536,7 @@ make_deflate(hid_t loc_id) /* set deflate data */ if (H5Pset_deflate(dcpl, 9) < 0) goto error; - if (make_dset(loc_id, "dset_deflate", sid, dcpl, buf[0]) < 0) + if (make_dset(loc_id, "dset_deflate", sid, dcpl, buf) < 0) goto error; /* create a reference to the dataset, test second seeep of file for references */ @@ -2585,13 +2587,14 @@ make_shuffle(hid_t loc_id) hid_t sid = H5I_INVALID_HID; /* dataspace ID */ hsize_t dims[RANK] = {DIM1, DIM2}; hsize_t chunk_dims[RANK] = {CDIM1, CDIM2}; - int ** buf = NULL; /* Create and fill array */ - H5TEST_ALLOCATE_2D_ARRAY(buf, int, DIM1, DIM2); + struct { + int arr[DIM1][DIM2]; + } *buf = malloc(sizeof(*buf)); if (NULL == buf) goto error; - H5TEST_FILL_2D_ARRAY(buf, int, DIM1, DIM2); + H5TEST_FILL_2D_HEAP_ARRAY(buf, int); /* create a space */ if ((sid = H5Screate_simple(RANK, dims, NULL)) < 0) @@ -2611,7 +2614,7 @@ make_shuffle(hid_t loc_id) /* set the shuffle filter */ if (H5Pset_shuffle(dcpl) < 0) goto error; - if (make_dset(loc_id, "dset_shuffle", sid, dcpl, buf[0]) < 0) + if (make_dset(loc_id, "dset_shuffle", sid, dcpl, buf) < 0) goto error; /*------------------------------------------------------------------------- @@ -2654,13 +2657,14 @@ make_fletcher32(hid_t loc_id) hid_t sid = H5I_INVALID_HID; /* dataspace ID */ hsize_t dims[RANK] = {DIM1, DIM2}; hsize_t chunk_dims[RANK] = {CDIM1, CDIM2}; - int ** buf = NULL; /* Create and fill array */ - H5TEST_ALLOCATE_2D_ARRAY(buf, int, DIM1, DIM2); + struct { + int arr[DIM1][DIM2]; + } *buf = malloc(sizeof(*buf)); if (NULL == buf) goto error; - H5TEST_FILL_2D_ARRAY(buf, int, DIM1, DIM2); + H5TEST_FILL_2D_HEAP_ARRAY(buf, int); /* create a space */ if ((sid = H5Screate_simple(RANK, dims, NULL)) < 0) @@ -2683,7 +2687,7 @@ make_fletcher32(hid_t loc_id) /* set the checksum filter */ if (H5Pset_fletcher32(dcpl) < 0) goto error; - if (make_dset(loc_id, "dset_fletcher32", sid, dcpl, buf[0]) < 0) + if (make_dset(loc_id, "dset_fletcher32", sid, dcpl, buf) < 0) goto error; /*------------------------------------------------------------------------- @@ -2726,15 +2730,17 @@ make_nbit(hid_t loc_id) hid_t sid = H5I_INVALID_HID; /* dataspace ID */ hid_t dtid = H5I_INVALID_HID; hid_t dsid = H5I_INVALID_HID; + hid_t dxpl = H5P_DEFAULT; hsize_t dims[RANK] = {DIM1, DIM2}; hsize_t chunk_dims[RANK] = {CDIM1, CDIM2}; - int ** buf = NULL; /* Create and fill array */ - H5TEST_ALLOCATE_2D_ARRAY(buf, int, DIM1, DIM2); + struct { + int arr[DIM1][DIM2]; + } *buf = malloc(sizeof(*buf)); if (NULL == buf) goto error; - H5TEST_FILL_2D_ARRAY(buf, int, DIM1, DIM2); + H5TEST_FILL_2D_HEAP_ARRAY(buf, int); /* create a space */ if ((sid = H5Screate_simple(RANK, dims, NULL)) < 0) @@ -2746,6 +2752,16 @@ make_nbit(hid_t loc_id) if (H5Pset_chunk(dcpl, RANK, chunk_dims) < 0) goto error; +#ifdef H5_HAVE_PARALLEL + /* Set up collective writes for parallel driver */ + if (h5_using_parallel_driver(NULL)) { + if ((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0) + goto error; + if (H5Pset_dxpl_mpio(dxpl, H5FD_MPIO_COLLECTIVE) < 0) + goto error; + } +#endif + dtid = H5Tcopy(H5T_NATIVE_INT); if (H5Tset_precision(dtid, (H5Tget_precision(dtid) - 1)) < 0) goto error; @@ -2757,7 +2773,7 @@ make_nbit(hid_t loc_id) goto error; if ((dsid = H5Dcreate2(loc_id, "dset_nbit", dtid, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0) goto error; - if (H5Dwrite(dsid, dtid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf[0]) < 0) + if (H5Dwrite(dsid, dtid, H5S_ALL, H5S_ALL, dxpl, buf) < 0) goto error; H5Dclose(dsid); @@ -2765,7 +2781,7 @@ make_nbit(hid_t loc_id) goto error; if ((dsid = H5Dcreate2(loc_id, "dset_int31", dtid, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0) goto error; - if (H5Dwrite(dsid, dtid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf[0]) < 0) + if (H5Dwrite(dsid, dtid, H5S_ALL, H5S_ALL, dxpl, buf) < 0) goto error; H5Dclose(dsid); @@ -2773,6 +2789,8 @@ make_nbit(hid_t loc_id) * close *------------------------------------------------------------------------- */ + if (dxpl != H5P_DEFAULT && H5Pclose(dxpl) < 0) + goto error; if (H5Sclose(sid) < 0) goto error; if (H5Pclose(dcpl) < 0) @@ -2788,6 +2806,7 @@ error: H5E_BEGIN_TRY { H5Tclose(dtid); + H5Pclose(dxpl); H5Pclose(dcpl); H5Sclose(sid); H5Dclose(dsid); @@ -2813,15 +2832,17 @@ make_scaleoffset(hid_t loc_id) hid_t sid = H5I_INVALID_HID; /* dataspace ID */ hid_t dtid = H5I_INVALID_HID; hid_t dsid = H5I_INVALID_HID; + hid_t dxpl = H5P_DEFAULT; hsize_t dims[RANK] = {DIM1, DIM2}; hsize_t chunk_dims[RANK] = {CDIM1, CDIM2}; - int ** buf = NULL; /* Create and fill array */ - H5TEST_ALLOCATE_2D_ARRAY(buf, int, DIM1, DIM2); + struct { + int arr[DIM1][DIM2]; + } *buf = malloc(sizeof(*buf)); if (NULL == buf) goto error; - H5TEST_FILL_2D_ARRAY(buf, int, DIM1, DIM2); + H5TEST_FILL_2D_HEAP_ARRAY(buf, int); /* create a space */ if ((sid = H5Screate_simple(RANK, dims, NULL)) < 0) @@ -2833,6 +2854,16 @@ make_scaleoffset(hid_t loc_id) if (H5Pset_chunk(dcpl, RANK, chunk_dims) < 0) goto error; +#ifdef H5_HAVE_PARALLEL + /* Set up collective writes for parallel driver */ + if (h5_using_parallel_driver(NULL)) { + if ((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0) + goto error; + if (H5Pset_dxpl_mpio(dxpl, H5FD_MPIO_COLLECTIVE) < 0) + goto error; + } +#endif + dtid = H5Tcopy(H5T_NATIVE_INT); /* remove the filters from the dcpl */ @@ -2842,20 +2873,22 @@ make_scaleoffset(hid_t loc_id) goto error; if ((dsid = H5Dcreate2(loc_id, "dset_scaleoffset", dtid, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0) goto error; - if (H5Dwrite(dsid, dtid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf[0]) < 0) + if (H5Dwrite(dsid, dtid, H5S_ALL, H5S_ALL, dxpl, buf) < 0) goto error; H5Dclose(dsid); if ((dsid = H5Dcreate2(loc_id, "dset_none", dtid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto error; - if (H5Dwrite(dsid, dtid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf[0]) < 0) + if (H5Dwrite(dsid, dtid, H5S_ALL, H5S_ALL, dxpl, buf) < 0) goto error; H5Tclose(dtid); H5Dclose(dsid); /*------------------------------------------------------------------------- - * close space and dcpl + * close space, dxpl and dcpl *------------------------------------------------------------------------- */ + if (dxpl != H5P_DEFAULT && H5Pclose(dxpl) < 0) + goto error; if (H5Sclose(sid) < 0) goto error; if (H5Pclose(dcpl) < 0) @@ -2868,6 +2901,7 @@ make_scaleoffset(hid_t loc_id) error: H5E_BEGIN_TRY { + H5Pclose(dxpl); H5Dclose(dsid); H5Tclose(dtid); H5Pclose(dcpl); @@ -2894,22 +2928,24 @@ make_all_filters(hid_t loc_id) hid_t sid = H5I_INVALID_HID; /* dataspace ID */ hid_t dtid = H5I_INVALID_HID; hid_t dsid = H5I_INVALID_HID; + hid_t dxpl = H5P_DEFAULT; #if defined(H5_HAVE_FILTER_SZIP) unsigned szip_options_mask = H5_SZIP_ALLOW_K13_OPTION_MASK | H5_SZIP_NN_OPTION_MASK; unsigned szip_pixels_per_block = 8; #endif /* H5_HAVE_FILTER_SZIP */ hsize_t dims[RANK] = {DIM1, DIM2}; hsize_t chunk_dims[RANK] = {CDIM1, CDIM2}; - int ** buf = NULL; #if defined(H5_HAVE_FILTER_SZIP) int szip_can_encode = 0; #endif /* Create and fill array */ - H5TEST_ALLOCATE_2D_ARRAY(buf, int, DIM1, DIM2); + struct { + int arr[DIM1][DIM2]; + } *buf = malloc(sizeof(*buf)); if (NULL == buf) goto error; - H5TEST_FILL_2D_ARRAY(buf, int, DIM1, DIM2); + H5TEST_FILL_2D_HEAP_ARRAY(buf, int); /* create a space */ if ((sid = H5Screate_simple(RANK, dims, NULL)) < 0) @@ -2921,6 +2957,16 @@ make_all_filters(hid_t loc_id) if (H5Pset_chunk(dcpl, RANK, chunk_dims) < 0) goto error; +#ifdef H5_HAVE_PARALLEL + /* Set up collective writes for parallel driver */ + if (h5_using_parallel_driver(NULL)) { + if ((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0) + goto error; + if (H5Pset_dxpl_mpio(dxpl, H5FD_MPIO_COLLECTIVE) < 0) + goto error; + } +#endif + /* set the shuffle filter */ if (H5Pset_shuffle(dcpl) < 0) goto error; @@ -2949,7 +2995,7 @@ make_all_filters(hid_t loc_id) goto error; #endif - if (make_dset(loc_id, "dset_all", sid, dcpl, buf[0]) < 0) + if (make_dset(loc_id, "dset_all", sid, dcpl, buf) < 0) goto error; /* remove the filters from the dcpl */ @@ -2958,7 +3004,7 @@ make_all_filters(hid_t loc_id) /* set the checksum filter */ if (H5Pset_fletcher32(dcpl) < 0) goto error; - if (make_dset(loc_id, "dset_fletcher32", sid, dcpl, buf[0]) < 0) + if (make_dset(loc_id, "dset_fletcher32", sid, dcpl, buf) < 0) goto error; /* Make sure encoding is enabled */ @@ -2970,7 +3016,7 @@ make_all_filters(hid_t loc_id) /* set szip data */ if (H5Pset_szip(dcpl, szip_options_mask, szip_pixels_per_block) < 0) goto error; - if (make_dset(loc_id, "dset_szip", sid, dcpl, buf[0]) < 0) + if (make_dset(loc_id, "dset_szip", sid, dcpl, buf) < 0) goto error; } else { @@ -2984,7 +3030,7 @@ make_all_filters(hid_t loc_id) /* set the shuffle filter */ if (H5Pset_shuffle(dcpl) < 0) goto error; - if (make_dset(loc_id, "dset_shuffle", sid, dcpl, buf[0]) < 0) + if (make_dset(loc_id, "dset_shuffle", sid, dcpl, buf) < 0) goto error; #if defined(H5_HAVE_FILTER_DEFLATE) @@ -2994,7 +3040,7 @@ make_all_filters(hid_t loc_id) /* set deflate data */ if (H5Pset_deflate(dcpl, 1) < 0) goto error; - if (make_dset(loc_id, "dset_deflate", sid, dcpl, buf[0]) < 0) + if (make_dset(loc_id, "dset_deflate", sid, dcpl, buf) < 0) goto error; #endif @@ -3010,7 +3056,7 @@ make_all_filters(hid_t loc_id) goto error; if ((dsid = H5Dcreate2(loc_id, "dset_nbit", dtid, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0) goto error; - if (H5Dwrite(dsid, dtid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf[0]) < 0) + if (H5Dwrite(dsid, dtid, H5S_ALL, H5S_ALL, dxpl, buf) < 0) goto error; /* close */ @@ -3021,6 +3067,8 @@ make_all_filters(hid_t loc_id) if (H5Sclose(sid) < 0) goto error; + if (dxpl != H5P_DEFAULT && H5Pclose(dxpl) < 0) + goto error; if (H5Pclose(dcpl) < 0) goto error; @@ -3033,6 +3081,7 @@ error: { H5Tclose(dtid); H5Dclose(dsid); + H5Pclose(dxpl); H5Pclose(dcpl); H5Sclose(sid); } @@ -3152,15 +3201,16 @@ make_layout(hid_t loc_id) hid_t sid = H5I_INVALID_HID; /* dataspace ID */ hsize_t dims[RANK] = {DIM1, DIM2}; hsize_t chunk_dims[RANK] = {CDIM1, CDIM2}; - int ** buf = NULL; int i; char name[16]; /* Create and fill array */ - H5TEST_ALLOCATE_2D_ARRAY(buf, int, DIM1, DIM2); + struct { + int arr[DIM1][DIM2]; + } *buf = malloc(sizeof(*buf)); if (NULL == buf) goto error; - H5TEST_FILL_2D_ARRAY(buf, int, DIM1, DIM2); + H5TEST_FILL_2D_HEAP_ARRAY(buf, int); /*------------------------------------------------------------------------- * make several dataset with no filters @@ -3168,7 +3218,7 @@ make_layout(hid_t loc_id) */ for (i = 0; i < 4; i++) { HDsprintf(name, "dset%d", i + 1); - if (write_dset(loc_id, RANK, dims, name, H5T_NATIVE_INT, buf[0]) < 0) + if (write_dset(loc_id, RANK, dims, name, H5T_NATIVE_INT, buf) < 0) goto error; } @@ -3189,7 +3239,7 @@ make_layout(hid_t loc_id) */ if (H5Pset_layout(dcpl, H5D_COMPACT) < 0) goto error; - if (make_dset(loc_id, "dset_compact", sid, dcpl, buf[0]) < 0) + if (make_dset(loc_id, "dset_compact", sid, dcpl, buf) < 0) goto error; /*------------------------------------------------------------------------- @@ -3198,7 +3248,7 @@ make_layout(hid_t loc_id) */ if (H5Pset_layout(dcpl, H5D_CONTIGUOUS) < 0) goto error; - if (make_dset(loc_id, "dset_contiguous", sid, dcpl, buf[0]) < 0) + if (make_dset(loc_id, "dset_contiguous", sid, dcpl, buf) < 0) goto error; /*------------------------------------------------------------------------- @@ -3207,7 +3257,7 @@ make_layout(hid_t loc_id) */ if (H5Pset_chunk(dcpl, RANK, chunk_dims) < 0) goto error; - if (make_dset(loc_id, "dset_chunk", sid, dcpl, buf[0]) < 0) + if (make_dset(loc_id, "dset_chunk", sid, dcpl, buf) < 0) goto error; /*------------------------------------------------------------------------- @@ -3264,13 +3314,13 @@ make_layout2(hid_t loc_id) hsize_t s_dims[RANK] = {S_DIM1, S_DIM2}; /* Dataspace (< 1 k) */ hsize_t chunk_dims[RANK] = {S_DIM1 / 2, S_DIM2 / 2}; /* Dimension sizes for chunks */ - int **s_buf = NULL; /* Temporary buffer */ - /* Create and fill array */ - H5TEST_ALLOCATE_2D_ARRAY(s_buf, int, S_DIM1, S_DIM2); + struct { + int arr[S_DIM1][S_DIM2]; + } *s_buf = malloc(sizeof(*s_buf)); if (NULL == s_buf) goto error; - H5TEST_FILL_2D_ARRAY(s_buf, int, S_DIM1, S_DIM2); + H5TEST_FILL_2D_HEAP_ARRAY(s_buf, int); /* Create dataspaces */ if ((s_sid = H5Screate_simple(RANK, s_dims, NULL)) < 0) @@ -3281,7 +3331,7 @@ make_layout2(hid_t loc_id) goto error; if (H5Pset_layout(contig_dcpl, H5D_CONTIGUOUS) < 0) goto error; - if (make_dset(loc_id, CONTIG_S, s_sid, contig_dcpl, s_buf[0]) < 0) + if (make_dset(loc_id, CONTIG_S, s_sid, contig_dcpl, s_buf) < 0) goto error; /* Create chunked datasets */ @@ -3289,7 +3339,7 @@ make_layout2(hid_t loc_id) goto error; if (H5Pset_chunk(chunked_dcpl, RANK, chunk_dims) < 0) goto error; - if (make_dset(loc_id, CHUNKED_S_FIX, s_sid, chunked_dcpl, s_buf[0]) < 0) + if (make_dset(loc_id, CHUNKED_S_FIX, s_sid, chunked_dcpl, s_buf) < 0) goto error; ret_value = 0; @@ -3343,19 +3393,21 @@ make_layout3(hid_t loc_id) hsize_t chunk_dims1[RANK] = {DIM1_L3 * 2, 5}; hsize_t chunk_dims2[RANK] = {SDIM1_L3 + 2, SDIM2_L3 / 2}; hsize_t chunk_dims3[RANK] = {SDIM1_L3 - 2, SDIM2_L3 / 2}; - int ** buf1 = NULL; - int ** buf2 = NULL; - /* Create and fill arrays */ - H5TEST_ALLOCATE_2D_ARRAY(buf1, int, DIM1_L3, DIM2_L3); - if (NULL == buf1) - goto error; - H5TEST_FILL_2D_ARRAY(buf1, int, DIM1_L3, DIM2_L3); + /* Create arrays */ + struct { + int arr[DIM1_L3][DIM2_L3]; + } *buf1 = malloc(sizeof(*buf1)); + struct { + int arr[SDIM1_L3][SDIM2_L3]; + } *buf2 = malloc(sizeof(*buf2)); - H5TEST_ALLOCATE_2D_ARRAY(buf2, int, SDIM1_L3, SDIM2_L3); - if (NULL == buf2) + if (NULL == buf1 || NULL == buf2) goto error; - H5TEST_FILL_2D_ARRAY(buf2, int, SDIM1_L3, SDIM2_L3); + + /* Fill arrays */ + H5TEST_FILL_2D_HEAP_ARRAY(buf1, int); + H5TEST_FILL_2D_HEAP_ARRAY(buf2, int); /*------------------------------------------------------------------------- * make chunked dataset with @@ -3373,7 +3425,7 @@ make_layout3(hid_t loc_id) if (H5Pset_chunk(dcpl1, RANK, chunk_dims1) < 0) goto error; - if (make_dset(loc_id, "chunk_unlimit1", sid1, dcpl1, buf1[0]) < 0) + if (make_dset(loc_id, "chunk_unlimit1", sid1, dcpl1, buf1) < 0) goto error; /*------------------------------------------------------------------------- @@ -3394,7 +3446,7 @@ make_layout3(hid_t loc_id) if (H5Pset_chunk(dcpl2, RANK, chunk_dims2) < 0) goto error; - if (make_dset(loc_id, "chunk_unlimit2", sid2, dcpl2, buf2[0]) < 0) + if (make_dset(loc_id, "chunk_unlimit2", sid2, dcpl2, buf2) < 0) goto error; /*------------------------------------------------------------------------- @@ -3411,7 +3463,7 @@ make_layout3(hid_t loc_id) if (H5Pset_chunk(dcpl3, RANK, chunk_dims3) < 0) goto error; - if (make_dset(loc_id, "chunk_unlimit3", sid2, dcpl3, buf2[0]) < 0) + if (make_dset(loc_id, "chunk_unlimit3", sid2, dcpl3, buf2) < 0) goto error; /*------------------------------------------------------------------------- @@ -5802,11 +5854,25 @@ out: static int make_dset(hid_t loc_id, const char *name, hid_t sid, hid_t dcpl, void *buf) { - hid_t did = H5I_INVALID_HID; + hid_t did = H5I_INVALID_HID; + hid_t dxpl_id = H5P_DEFAULT; if ((did = H5Dcreate2(loc_id, name, H5T_NATIVE_INT, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0) return -1; - if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) + +#ifdef H5_HAVE_PARALLEL + /* Set up collective writes for parallel driver */ + if (h5_using_parallel_driver(NULL)) { + if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) + goto out; + if (H5Pset_dxpl_mpio(dxpl_id, H5FD_MPIO_COLLECTIVE) < 0) + goto out; + } +#endif + + if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl_id, buf) < 0) + goto out; + if (dxpl_id != H5P_DEFAULT && H5Pclose(dxpl_id) < 0) goto out; if (H5Dclose(did) < 0) return -1; @@ -5835,17 +5901,30 @@ out: static int write_dset(hid_t loc_id, int rank, hsize_t *dims, const char *dset_name, hid_t tid, void *buf) { - hid_t did = H5I_INVALID_HID; - hid_t sid = H5I_INVALID_HID; + hid_t did = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; + hid_t dxpl_id = H5P_DEFAULT; if ((sid = H5Screate_simple(rank, dims, NULL)) < 0) return -1; if ((did = H5Dcreate2(loc_id, dset_name, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; if (buf) { - if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) +#ifdef H5_HAVE_PARALLEL + /* Set up collective writes for parallel driver */ + if (h5_using_parallel_driver(NULL)) { + if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) + goto out; + if (H5Pset_dxpl_mpio(dxpl_id, H5FD_MPIO_COLLECTIVE) < 0) + goto out; + } +#endif + + if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, dxpl_id, buf) < 0) goto out; } + if (dxpl_id != H5P_DEFAULT && H5Pclose(dxpl_id) < 0) + goto out; if (H5Dclose(did) < 0) goto out; if (H5Sclose(sid) < 0) @@ -5856,6 +5935,7 @@ write_dset(hid_t loc_id, int rank, hsize_t *dims, const char *dset_name, hid_t t out: H5E_BEGIN_TRY { + H5Pclose(dxpl_id); H5Dclose(did); H5Sclose(sid); } @@ -6244,7 +6324,7 @@ gen_refered_objs(hid_t loc_id) goto out; } - /* create normal dataset which is refered */ + /* create normal dataset which is referred */ did2 = H5Dcreate2(loc_id, NAME_OBJ_DS2, H5T_STD_I8LE, sid2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); if (did2 < 0) { HDfprintf(stderr, "Error: %s %d> H5Dcreate2 failed.\n", __func__, __LINE__); @@ -6284,7 +6364,7 @@ out: * Generate object references to objects (dataset,group and named datatype) * * Note: - * copied from h5copygentest.c and upate to create named datatype + * copied from h5copygentest.c and update to create named datatype * * Programmer: Jonathan Kim (March 18, 2010) *------------------------------------------------------------------------*/ diff --git a/tools/test/h5repack/testfiles/README b/tools/test/h5repack/testfiles/README index 4096dee..4cb66f4 100644 --- a/tools/test/h5repack/testfiles/README +++ b/tools/test/h5repack/testfiles/README @@ -1,5 +1,5 @@ h5repack_nested_8bit_enum_deflated.h5: h5repack_nested_8bit_enum.h5: - enuberated 8bit type nested in compount type. Original file provided + enuberated 8bit type nested in compound type. Original file provided by a user (HDFFV-8667) as a test file. Used h5copy to extract only the Compound type dataset. The non-deflated version is produced by h5repack. diff --git a/tools/test/h5repack/testfiles/h5repack-help.txt b/tools/test/h5repack/testfiles/h5repack-help.txt index cb10d22..c1caf52 100644 --- a/tools/test/h5repack/testfiles/h5repack-help.txt +++ b/tools/test/h5repack/testfiles/h5repack-help.txt @@ -3,7 +3,8 @@ usage: h5repack [OPTIONS] file1 file2 file2 Output HDF5 File OPTIONS -h, --help Print a usage message and exit - -v, --verbose Verbose mode, print object information + -v N, --verbose=N Verbose mode, print object information. + N - is an integer greater than 1, 2 displays read/write timing -V, --version Print version number and exit -n, --native Use a native HDF5 type when repacking --enable-error-stack Prints messages from the HDF5 error stack as they @@ -20,6 +21,18 @@ usage: h5repack [OPTIONS] file1 file2 HDF5 file specified --dst-vol-info VOL-specific info to pass to the VOL connector used for opening the output HDF5 file specified + --src-vfd-value Value (ID) of the VFL driver to use for opening the + input HDF5 file specified + --src-vfd-name Name of the VFL driver to use for opening the input + HDF5 file specified + --src-vfd-info VFD-specific info to pass to the VFL driver used for + opening the input HDF5 file specified + --dst-vfd-value Value (ID) of the VFL driver to use for opening the + output HDF5 file specified + --dst-vfd-name Name of the VFL driver to use for opening the output + HDF5 file specified + --dst-vfd-info VFD-specific info to pass to the VFL driver used for + opening the output HDF5 file specified -L, --latest Use latest version of file format This option will take precedence over the options --low and --high diff --git a/tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_version_test.ddl b/tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_version_test.ddl index 15ae813..0992a0c 100644 --- a/tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_version_test.ddl +++ b/tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_version_test.ddl @@ -11,7 +11,7 @@ GROUP "/" { USER_DEFINED_FILTER { FILTER_ID 260 COMMENT dynlib4 - PARAMS { 9 1 13 1 } + PARAMS { 9 1 13 2 } } } FILLVALUE { @@ -33,7 +33,7 @@ GROUP "/" { USER_DEFINED_FILTER { FILTER_ID 260 COMMENT dynlib4 - PARAMS { 9 1 13 1 } + PARAMS { 9 1 13 2 } } } FILLVALUE { @@ -55,7 +55,7 @@ GROUP "/" { USER_DEFINED_FILTER { FILTER_ID 260 COMMENT dynlib4 - PARAMS { 9 1 13 1 } + PARAMS { 9 1 13 2 } } } FILLVALUE { @@ -77,7 +77,7 @@ GROUP "/" { USER_DEFINED_FILTER { FILTER_ID 260 COMMENT dynlib4 - PARAMS { 9 1 13 1 } + PARAMS { 9 1 13 2 } } } FILLVALUE { @@ -99,7 +99,7 @@ GROUP "/" { USER_DEFINED_FILTER { FILTER_ID 260 COMMENT dynlib4 - PARAMS { 9 1 13 1 } + PARAMS { 9 1 13 2 } } } FILLVALUE { @@ -121,7 +121,7 @@ GROUP "/" { USER_DEFINED_FILTER { FILTER_ID 260 COMMENT dynlib4 - PARAMS { 9 1 13 1 } + PARAMS { 9 1 13 2 } } } FILLVALUE { @@ -143,7 +143,7 @@ GROUP "/" { USER_DEFINED_FILTER { FILTER_ID 260 COMMENT dynlib4 - PARAMS { 9 1 13 1 } + PARAMS { 9 1 13 2 } } } FILLVALUE { diff --git a/tools/test/h5stat/testh5stat.sh.in b/tools/test/h5stat/testh5stat.sh.in index 647f06a..1b4e504 100644 --- a/tools/test/h5stat/testh5stat.sh.in +++ b/tools/test/h5stat/testh5stat.sh.in @@ -13,7 +13,7 @@ # # Tests for the h5stat tool # -# Modifcations: +# Modifications: # Vailin Choi; July 2013 # Add tests for -l, -m, -a options # diff --git a/tools/test/misc/h5clear_gentest.c b/tools/test/misc/h5clear_gentest.c index 53fbc42..97feabd 100644 --- a/tools/test/misc/h5clear_gentest.c +++ b/tools/test/misc/h5clear_gentest.c @@ -16,7 +16,7 @@ /* The HDF5 test files */ const char *FILENAME[] = { "h5clear_sec2_v3.h5", /* 0 -- sec2 file with superblock version 3 */ - "h5clear_log_v3.h5", /* 1 -- log file with superblock veresion 3 */ + "h5clear_log_v3.h5", /* 1 -- log file with superblock version 3 */ "h5clear_sec2_v0.h5", /* 2 -- sec2 file with superblock version 0 */ "h5clear_sec2_v2.h5" /* 3 -- sec2 file with superblock version 2 */ }; @@ -56,24 +56,26 @@ const char *FILENAME_ENHANCE[] = { static int gen_cache_image_file(const char *fname) { - hid_t fid = H5I_INVALID_HID; /* File ID */ - hid_t did = -1, sid = H5I_INVALID_HID; /* Dataset ID, dataspace ID */ - hid_t fapl = H5I_INVALID_HID; /* File access property list */ - hid_t dcpl = H5I_INVALID_HID; /* Dataset creation property list */ - hsize_t dims[2]; /* Dimension sizes */ - hsize_t chunks[2]; /* Chunked dimension sizes */ - int i, j; /* Local index variables */ - int ** buf = NULL; /* Buffer for data to write */ - H5AC_cache_image_config_t cache_image_config = /* Cache image input configuration */ + hid_t fid = H5I_INVALID_HID; /* File ID */ + hid_t did = -1, sid = H5I_INVALID_HID; /* Dataset ID, dataspace ID */ + hid_t fapl = H5I_INVALID_HID; /* File access property list */ + hid_t dcpl = H5I_INVALID_HID; /* Dataset creation property list */ + hsize_t dims[2]; /* Dimension sizes */ + hsize_t chunks[2]; /* Chunked dimension sizes */ + int i, j; /* Local index variables */ + struct { + int arr[50][100]; + } * buf; /* Buffer for data to write */ + H5AC_cache_image_config_t cache_image_config = /* Cache image input configuration */ {H5AC__CURR_CACHE_IMAGE_CONFIG_VERSION, TRUE, FALSE, H5AC__CACHE_IMAGE__ENTRY_AGEOUT__NONE}; /* Create and fill array */ - H5TEST_ALLOCATE_2D_ARRAY(buf, int, 50, 100); + buf = malloc(sizeof(*buf)); if (NULL == buf) goto error; for (i = 0; i < 50; i++) for (j = 0; j < 100; j++) - buf[i][j] = i * j; + buf->arr[i][j] = i * j; /* Create a copy of file access property list */ if ((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) @@ -108,7 +110,7 @@ gen_cache_image_file(const char *fname) goto error; /* Write to the dataset */ - if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf[0]) < 0) + if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) goto error; /* Closing */ @@ -426,7 +428,7 @@ main(void) if ((my_fapl = H5Pcopy(fapl2)) < 0) goto error; /* Create the file */ - HDsprintf(fname, "%s%s", new_format ? "latest_" : "", FILENAME[0]); + HDsnprintf(fname, sizeof(fname), "%s%s", new_format ? "latest_" : "", FILENAME[0]); if ((fid = H5Fcreate(fname, H5F_ACC_TRUNC | (new_format ? 0 : H5F_ACC_SWMR_WRITE), H5P_DEFAULT, my_fapl)) < 0) goto error; @@ -451,7 +453,7 @@ main(void) goto error; /* Create the file */ - HDsprintf(fname, "%s%s", new_format ? "latest_" : "", FILENAME[1]); + HDsnprintf(fname, sizeof(fname), "%s%s", new_format ? "latest_" : "", FILENAME[1]); if ((fid = H5Fcreate(fname, H5F_ACC_TRUNC | (new_format ? 0 : H5F_ACC_SWMR_WRITE), H5P_DEFAULT, my_fapl)) < 0) goto error; diff --git a/tools/test/misc/h5perf_gentest.c b/tools/test/misc/h5perf_gentest.c index 332e49c..248fd92 100644 --- a/tools/test/misc/h5perf_gentest.c +++ b/tools/test/misc/h5perf_gentest.c @@ -255,9 +255,9 @@ create_perf_test_file(const char *fname, int ngrps, int ndsets, int nattrs, hsiz buf_vlen_s = (char **)calloc(dim0, sizeof(char *)); buf_str = malloc(dim0 * sizeof(*buf_str)); - /* allocate array of doulbe pointers */ + /* allocate array of double pointers */ buf_double2d = (double **)calloc(dims2d[0], sizeof(double *)); - /* allocate a contigous chunk of memory for the data */ + /* allocate a contiguous chunk of memory for the data */ buf_double2d[0] = (double *)calloc(dims2d[0] * dims2d[1], sizeof(double)); /* assign memory city to pointer array */ for (i = 1; i < dims2d[0]; i++) @@ -396,7 +396,7 @@ create_perf_test_file(const char *fname, int ngrps, int ndsets, int nattrs, hsiz H5Dclose(did); /* 6 add compound data */ - HDsprintf(name, "%05d compund data", j); + HDsprintf(name, "%05d compound data", j); did = H5Dcreate(gid1, name, cmp_tid, sid_1d, H5P_DEFAULT, dcpl, H5P_DEFAULT); H5Dwrite(did, cmp_tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_comp); if (!j) diff --git a/tools/test/misc/testfiles/h5mkgrp_help.txt b/tools/test/misc/testfiles/h5mkgrp_help.txt index 9525230..5d81b34 100644 --- a/tools/test/misc/testfiles/h5mkgrp_help.txt +++ b/tools/test/misc/testfiles/h5mkgrp_help.txt @@ -11,4 +11,10 @@ usage: h5mkgrp [OPTIONS] FILE GROUP... HDF5 file specified --vol-info VOL-specific info to pass to the VOL connector used for opening the HDF5 file specified + --vfd-value Value (ID) of the VFL driver to use for opening the + HDF5 file specified + --vfd-name Name of the VFL driver to use for opening the + HDF5 file specified + --vfd-info VFD-specific info to pass to the VFL driver used for + opening the HDF5 file specified diff --git a/tools/test/perform/chunk_cache.c b/tools/test/perform/chunk_cache.c index b515961..832447e 100644 --- a/tools/test/perform/chunk_cache.c +++ b/tools/test/perform/chunk_cache.c @@ -39,7 +39,7 @@ #define RDCC_NSLOTS 5 #define RDCC_NBYTES (1024 * 1024 * 10) -#define RDCC_W0 0.75F +#define RDCC_W0 0.75 #define FILTER_COUNTER 306 static size_t nbytes_global; @@ -81,7 +81,7 @@ counter(unsigned H5_ATTR_UNUSED flags, size_t H5_ATTR_UNUSED cd_nelmts, static void cleanup(void) { - if (!getenv("HDF5_NOCLEANUP")) { + if (!getenv(HDF5_NOCLEANUP)) { remove(FILENAME); } } @@ -98,7 +98,9 @@ create_dset1(hid_t file) hid_t dcpl = H5I_INVALID_HID; hsize_t dims[RANK] = {DSET1_DIM1, DSET1_DIM2}; hsize_t chunk_dims[RANK] = {CHUNK1_DIM1, CHUNK1_DIM2}; - int ** data = NULL; /* data for writing */ + struct { + int arr[DSET1_DIM1][DSET1_DIM2]; + } *data = malloc(sizeof(*data)); /* Create the data space. */ if ((dataspace = H5Screate_simple(RANK, dims, NULL)) < 0) @@ -122,9 +124,8 @@ create_dset1(hid_t file) 0) goto error; - /* Create & fill array */ - H5TEST_ALLOCATE_2D_ARRAY(data, int, DSET1_DIM1, DSET1_DIM2); - H5TEST_FILL_2D_ARRAY(data, int, DSET1_DIM1, DSET1_DIM2); + /* Fill array */ + H5TEST_FILL_2D_HEAP_ARRAY(data, int); /* Write data to dataset */ if (H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, data) < 0) @@ -162,7 +163,9 @@ create_dset2(hid_t file) hid_t dcpl = H5I_INVALID_HID; hsize_t dims[RANK] = {DSET2_DIM1, DSET2_DIM2}; hsize_t chunk_dims[RANK] = {CHUNK2_DIM1, CHUNK2_DIM2}; - int ** data = NULL; /* data for writing */ + struct { + int arr[DSET2_DIM1][DSET2_DIM2]; + } *data = malloc(sizeof(*data)); /* Create the data space. */ if ((dataspace = H5Screate_simple(RANK, dims, NULL)) < 0) @@ -185,9 +188,8 @@ create_dset2(hid_t file) 0) goto error; - /* Create & fill array */ - H5TEST_ALLOCATE_2D_ARRAY(data, int, DSET2_DIM1, DSET2_DIM2); - H5TEST_FILL_2D_ARRAY(data, int, DSET2_DIM1, DSET2_DIM2); + /* Fill array */ + H5TEST_FILL_2D_HEAP_ARRAY(data, int); /* Write data to dataset */ if (H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, data) < 0) diff --git a/tools/test/perform/direct_write_perf.c b/tools/test/perform/direct_write_perf.c index 371c4f9..1d7756b 100644 --- a/tools/test/perform/direct_write_perf.c +++ b/tools/test/perform/direct_write_perf.c @@ -625,7 +625,7 @@ test_unix_write(void) TEST_ERROR; } else if (op_size == 0) { - printf(" unable to write sufficent data to file because %s \n", strerror(errno)); + printf(" unable to write sufficient data to file because %s \n", strerror(errno)); TEST_ERROR; } } @@ -655,7 +655,7 @@ main(void) hid_t fapl = H5P_DEFAULT; int i; - sprintf(filename, "%s.h5", FILENAME[0]); + snprintf(filename, sizeof(filename), "%s.h5", FILENAME[0]); create_file(fapl); test_direct_write_uncompressed_data(fapl); diff --git a/tools/test/perform/overhead.c b/tools/test/perform/overhead.c index 60ec8d8..c974928 100644 --- a/tools/test/perform/overhead.c +++ b/tools/test/perform/overhead.c @@ -119,7 +119,7 @@ usage(const char *prog) static void cleanup(void) { - if (!getenv("HDF5_NOCLEANUP")) { + if (!getenv(HDF5_NOCLEANUP)) { remove(FILE_NAME_1); } } @@ -187,7 +187,7 @@ test(fill_t fill_style, const double splits[], hbool_t verbose, hbool_t use_rdcc if (!use_rdcc) { if (H5Pget_cache(fapl, &mdc_nelmts, NULL, NULL, NULL) < 0) goto error; - if (H5Pset_cache(fapl, mdc_nelmts, 0, 0, 0.0F) < 0) + if (H5Pset_cache(fapl, mdc_nelmts, 0, 0, 0.0) < 0) goto error; } if ((file = H5Fcreate(FILE_NAME_1, H5F_ACC_TRUNC, H5P_DEFAULT, fapl)) < 0) diff --git a/tools/test/perform/perf_meta.c b/tools/test/perform/perf_meta.c index d8ed9ec..ad76711 100644 --- a/tools/test/perform/perf_meta.c +++ b/tools/test/perform/perf_meta.c @@ -304,7 +304,7 @@ create_dsets(hid_t file) * Create a dataset using the default dataset creation properties. */ for (i = 0; i < NUM_DSETS; i++) { - HDsprintf(dset_name, "dataset %d", i); + HDsnprintf(dset_name, sizeof(dset_name), "dataset %d", i); if ((dataset = H5Dcreate2(file, dset_name, H5T_NATIVE_DOUBLE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto error; @@ -366,14 +366,14 @@ create_attrs_1(void) * Create all(user specifies the number) attributes for each dataset */ for (i = 0; i < NUM_DSETS; i++) { - HDsprintf(dset_name, "dataset %d", i); + HDsnprintf(dset_name, sizeof(dset_name), "dataset %d", i); open_t.start = retrieve_time(); if ((dataset = H5Dopen2(file, dset_name, H5P_DEFAULT)) < 0) goto error; perf(&open_t, open_t.start, retrieve_time()); for (j = 0; j < NUM_ATTRS; j++) { - HDsprintf(attr_name, "all attrs for each dset %d", j); + HDsnprintf(attr_name, sizeof(attr_name), "all attrs for each dset %d", j); attr_t.start = retrieve_time(); if ((attr = H5Acreate2(dataset, attr_name, H5T_NATIVE_DOUBLE, small_space, H5P_DEFAULT, H5P_DEFAULT)) < 0) @@ -468,7 +468,7 @@ create_attrs_2(void) * Create all(user specifies the number) attributes for each new dataset */ for (i = 0; i < NUM_DSETS; i++) { - HDsprintf(dset_name, "dataset %d", i); + HDsnprintf(dset_name, sizeof(dset_name), "dataset %d", i); create_t.start = retrieve_time(); if ((dataset = H5Dcreate2(file, dset_name, H5T_NATIVE_DOUBLE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) @@ -476,7 +476,7 @@ create_attrs_2(void) perf(&create_t, create_t.start, retrieve_time()); for (j = 0; j < NUM_ATTRS; j++) { - HDsprintf(attr_name, "all attrs for each dset %d", j); + HDsnprintf(attr_name, sizeof(attr_name), "all attrs for each dset %d", j); attr_t.start = retrieve_time(); if ((attr = H5Acreate2(dataset, attr_name, H5T_NATIVE_DOUBLE, small_space, H5P_DEFAULT, H5P_DEFAULT)) < 0) @@ -579,14 +579,14 @@ create_attrs_3(void) for (i = 0; i < loop_num; i++) { for (j = 0; j < NUM_DSETS; j++) { - HDsprintf(dset_name, "dataset %d", j); + HDsnprintf(dset_name, sizeof(dset_name), "dataset %d", j); open_t.start = retrieve_time(); if ((dataset = H5Dopen2(file, dset_name, H5P_DEFAULT)) < 0) goto error; perf(&open_t, open_t.start, retrieve_time()); for (k = 0; k < BATCH_ATTRS; k++) { - HDsprintf(attr_name, "some attrs for each dset %d %d", i, k); + HDsnprintf(attr_name, sizeof(attr_name), "some attrs for each dset %d %d", i, k); attr_t.start = retrieve_time(); if ((attr = H5Acreate2(dataset, attr_name, H5T_NATIVE_DOUBLE, small_space, H5P_DEFAULT, H5P_DEFAULT)) < 0) diff --git a/tools/test/perform/pio_standalone.h b/tools/test/perform/pio_standalone.h index f1fb946..e64a765 100644 --- a/tools/test/perform/pio_standalone.h +++ b/tools/test/perform/pio_standalone.h @@ -461,7 +461,8 @@ struct h5_long_options { */ }; -extern int H5_get_option(int argc, const char **argv, const char *opt, const struct h5_long_options *l_opt); +extern int H5_get_option(int argc, const char *const *argv, const char *opt, + const struct h5_long_options *l_opt); extern int nCols; /*max number of columns for outputting */ diff --git a/tools/test/perform/sio_standalone.h b/tools/test/perform/sio_standalone.h index 99cca75..57180e5 100644 --- a/tools/test/perform/sio_standalone.h +++ b/tools/test/perform/sio_standalone.h @@ -476,7 +476,8 @@ struct h5_long_options { */ }; -extern int H5_get_option(int argc, const char **argv, const char *opt, const struct h5_long_options *l_opt); +extern int H5_get_option(int argc, const char *const *argv, const char *opt, + const struct h5_long_options *l_opt); extern int nCols; /*max number of columns for outputting */ diff --git a/tools/test/perform/zip_perf.c b/tools/test/perform/zip_perf.c index d8cd3a1..74b1685 100644 --- a/tools/test/perform/zip_perf.c +++ b/tools/test/perform/zip_perf.c @@ -103,7 +103,7 @@ error(const char *fmt, ...) static void cleanup(void) { - if (!HDgetenv("HDF5_NOCLEANUP")) + if (!HDgetenv(HDF5_NOCLEANUP)) HDunlink(filename); HDfree(filename); } @@ -267,7 +267,7 @@ usage(void) HDfprintf(stdout, " data you want [default: 0]"); HDfprintf(stdout, " -s S, --file-size=S Maximum size of uncompressed file [default: 64M]\n"); HDfprintf(stdout, " -B S, --max-buffer_size=S Maximum size of buffer [default: 1M]\n"); - HDfprintf(stdout, " -b S, --min-buffer_size=S Minumum size of buffer [default: 128K]\n"); + HDfprintf(stdout, " -b S, --min-buffer_size=S Minimum size of buffer [default: 128K]\n"); HDfprintf(stdout, " -p D, --prefix=D The directory prefix to place the file\n"); HDfprintf(stdout, " -r, --random-test Use random data to write to the file\n"); HDfprintf(stdout, " [default: no]\n"); @@ -396,7 +396,7 @@ do_write_test(unsigned long file_size, unsigned long min_buf_size, unsigned long error("out of memory"); } - compression_time = 0.0F; + compression_time = 0.0; if (random_test) fill_with_random_data(src, src_len); @@ -489,7 +489,7 @@ do_write_test(unsigned long file_size, unsigned long min_buf_size, unsigned long * Modifications: */ int -main(int argc, const char *argv[]) +main(int argc, char *argv[]) { unsigned long min_buf_size = 128 * ONE_KB, max_buf_size = ONE_MB; unsigned long file_size = 64 * ONE_MB; @@ -500,7 +500,7 @@ main(int argc, const char *argv[]) /* Initialize h5tools lib */ h5tools_init(); - while ((opt = H5_get_option(argc, argv, s_opts, l_opts)) > 0) { + while ((opt = H5_get_option(argc, (const char *const *)argv, s_opts, l_opts)) > 0) { switch ((char)opt) { case '0': case '1': @@ -551,7 +551,7 @@ main(int argc, const char *argv[]) } if (min_buf_size > max_buf_size) - error("minmum buffer size (%d) exceeds maximum buffer size (%d)", min_buf_size, max_buf_size); + error("minimum buffer size (%d) exceeds maximum buffer size (%d)", min_buf_size, max_buf_size); HDfprintf(stdout, "Filesize: %ld\n", file_size); |