merge and fix

7 files changed, 101 insertions, 42 deletions

diff --git a/tools/test/h5dump/errfiles/tdset-2.err b/tools/test/h5dump/errfiles/tdset-2.err
index 2d70b35..39bbb0e 100644
--- a/tools/test/h5dump/errfiles/tdset-2.err
+++ b/tools/test/h5dump/errfiles/tdset-2.err
@@ -27,7 +27,7 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs):
     major: Symbol table
     minor: Object not found
 HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs):
-  #000: (file name) line (number) in H5Lget_info(): unable to get link info
+  #000: (file name) line (number) in H5Lget_info2(): unable to get link info
     major: Links
     minor: Can't get value
   #001: (file name) line (number) in H5VL_link_get(): link get failed
diff --git a/tools/test/h5dump/errfiles/tperror.err b/tools/test/h5dump/errfiles/tperror.err
index b0b908b..e2f24c1 100644
--- a/tools/test/h5dump/errfiles/tperror.err
+++ b/tools/test/h5dump/errfiles/tperror.err
@@ -27,7 +27,7 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs):
     major: Symbol table
     minor: Object not found
 HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs):
-  #000: (file name) line (number) in H5Lget_info(): unable to get link info
+  #000: (file name) line (number) in H5Lget_info2(): unable to get link info
     major: Links
     minor: Can't get value
   #001: (file name) line (number) in H5VL_link_get(): link get failed
diff --git a/tools/test/h5dump/errfiles/tqmarkfile.err b/tools/test/h5dump/errfiles/tqmarkfile.err
index 2c4f1ff..4c3b2ef 100644
--- a/tools/test/h5dump/errfiles/tqmarkfile.err
+++ b/tools/test/h5dump/errfiles/tqmarkfile.err
@@ -15,7 +15,7 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs):
     major: Symbol table
     minor: Object not found
 HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs):
-  #000: (file name) line (number) in H5Lget_info(): unable to get link info
+  #000: (file name) line (number) in H5Lget_info2(): unable to get link info
     major: Symbol table
     minor: Object not found
   #001: (file name) line (number) in H5L_get_info(): name doesn't exist
diff --git a/tools/test/h5dump/h5dumpgentest.c b/tools/test/h5dump/h5dumpgentest.c
index 026ab20..e68e622 100644
--- a/tools/test/h5dump/h5dumpgentest.c
+++ b/tools/test/h5dump/h5dumpgentest.c
@@ -463,10 +463,23 @@ gent_dataset(void)
 {
     hid_t fid, dataset, space;
     hsize_t dims[2];
-    int dset1[10][20];
-    double dset2[30][20];
+    int     **dset1         = NULL;
+    int     *dset1_data     = NULL;
+    double  **dset2         = NULL;
+    double  *dset2_data     = NULL;
     int i, j;
 
+    /* Set up data arrays */
+    dset1_data = (int *)HDcalloc(10 * 20, sizeof(int));
+    dset1 = (int **)HDcalloc(10, sizeof(dset1_data));
+    for (i = 0; i < 10; i++)
+        dset1[i] = dset1_data + (i * 20);
+
+    dset2_data = (double *)HDcalloc(30 * 20, sizeof(double));
+    dset2 = (double **)HDcalloc(30, sizeof(dset2_data));
+    for (i = 0; i < 30; i++)
+        dset2[i] = dset2_data + (i * 20);
+
     fid = H5Fcreate(FILE2, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
 
     /* dset1 */
@@ -478,7 +491,7 @@ gent_dataset(void)
         for(j = 0; j < 20; j++)
             dset1[i][j] = j + i;
 
-    H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset1);
+    H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset1_data);
     H5Sclose(space);
     H5Dclose(dataset);
 
@@ -491,11 +504,16 @@ gent_dataset(void)
         for(j = 0; j < 20; j++)
             dset2[i][j] = 0.0001F * (float)j + (float)i;
 
-    H5Dwrite(dataset, H5T_NATIVE_DOUBLE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset2);
+    H5Dwrite(dataset, H5T_NATIVE_DOUBLE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset2_data);
 
     H5Sclose(space);
     H5Dclose(dataset);
     H5Fclose(fid);
+
+    HDfree(dset1);
+    HDfree(dset1_data);
+    HDfree(dset2);
+    HDfree(dset2_data);
 }
 
 static void
@@ -1773,9 +1791,17 @@ static void gent_str(void) {
             int a[8][10];
             char s[12][33];
     } compound_t;
-    compound_t comp1[3][6];
+
+    compound_t  **comp1     = NULL;
+    compound_t  *comp1_data = NULL;
     hsize_t mdims[2];
 
+    /* Set up data array */
+    comp1_data = (compound_t *)HDcalloc(3 * 6, sizeof(compound_t));
+    comp1 = (compound_t **)HDcalloc(3, sizeof(comp1_data));
+    for (i = 0; i < 3; i++)
+        comp1[i] = comp1_data + (i * 6);
+
     fid = H5Fcreate(FILE13, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
 
     /* string 1 : nullterm string */
@@ -1861,7 +1887,7 @@ static void gent_str(void) {
         }
 
     dataset = H5Dcreate2(fid, "/comp1", f_type, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
-    H5Dwrite(dataset, f_type2, H5S_ALL, H5S_ALL, H5P_DEFAULT, comp1);
+    H5Dwrite(dataset, f_type2, H5S_ALL, H5S_ALL, H5P_DEFAULT, comp1_data);
 
     H5Tclose(f_type);
     H5Tclose(f_type2);
@@ -1869,6 +1895,9 @@ static void gent_str(void) {
     H5Dclose(dataset);
 
     H5Fclose(fid);
+
+    HDfree(comp1);
+    HDfree(comp1_data);
 }
 
 /*
@@ -3747,9 +3776,15 @@ void gent_multi(void)
     H5FD_mem_t mt, memb_map[H5FD_MEM_NTYPES];
     hid_t memb_fapl[H5FD_MEM_NTYPES];
     const char *memb_name[H5FD_MEM_NTYPES];
-    char sv[H5FD_MEM_NTYPES][1024];
+    char **sv = NULL;
+    char *sv_data = NULL;
     haddr_t memb_addr[H5FD_MEM_NTYPES];
 
+    sv_data = (char *)HDcalloc(H5FD_MEM_NTYPES * 1024, sizeof(char));                          
+    sv = (char **)HDcalloc(H5FD_MEM_NTYPES, sizeof(sv_data));                            
+    for (i = 0; i < H5FD_MEM_NTYPES; i++)                                                     
+        sv[i] = sv_data + (i * 1024);
+
     fapl = H5Pcreate(H5P_FILE_ACCESS);
 
     HDmemset(memb_map, 0, sizeof memb_map);
@@ -3790,6 +3825,9 @@ void gent_multi(void)
     H5Dclose(dataset);
     H5Fclose(fid);
     H5Pclose(fapl);
+
+    HDfree(sv);
+    HDfree(sv_data);
 }
 
 static void gent_large_objname(void)
@@ -7961,7 +7999,7 @@ static void gent_compound_attr_intsizes(void) {
             int64_t dset64[F70_XDIM][F70_YDIM64];
             double  dsetdbl[F70_XDIM][F70_YDIM8];
     } Array1Struct;
-    Array1Struct Array1[F70_LENGTH];
+    Array1Struct *Array1 = NULL;
 
     hid_t Array1Structid; /* File datatype identifier */
     herr_t H5_ATTR_NDEBUG_UNUSED status; /* Error checking variable */
@@ -7969,6 +8007,8 @@ static void gent_compound_attr_intsizes(void) {
 
     int m, n, o; /* Array init loop vars     */
 
+    Array1 = (Array1Struct *)HDcalloc(F70_LENGTH, sizeof(Array1Struct));
+
     /* Initialize the data in the arrays/datastructure                */
     for (m = 0; m < F70_LENGTH; m++) {
 
@@ -8200,6 +8240,8 @@ static void gent_compound_attr_intsizes(void) {
 
     status = H5Fclose(fid);
     HDassert(status >= 0);
+
+    HDfree(Array1);
 }
 
 static void gent_nested_compound_dt(void) {       /* test nested data type */
diff --git a/tools/test/misc/h5repart_gentest.c b/tools/test/misc/h5repart_gentest.c
index 5c1ff87..bd94104 100644
--- a/tools/test/misc/h5repart_gentest.c
+++ b/tools/test/misc/h5repart_gentest.c
@@ -25,7 +25,8 @@
 #define FAMILY_SIZE     1024
 #define FILENAME        "family_file%05d.h5"
 
-static int buf[FAMILY_NUMBER][FAMILY_SIZE];
+int     **buf       = NULL;
+int     *buf_data   = NULL;
 
 int main(void)
 {
@@ -34,66 +35,82 @@ int main(void)
     int         i, j;
     hsize_t     dims[2]={FAMILY_NUMBER, FAMILY_SIZE};
 
+    /* Set up data array */
+    if(NULL == (buf_data = (int *)HDcalloc(FAMILY_NUMBER * FAMILY_SIZE, sizeof(int)))) {
+        HDperror("HDcalloc");
+        HDexit(EXIT_FAILURE);
+    }
+    if(NULL == (buf = (int **)HDcalloc(FAMILY_NUMBER, sizeof(buf_data)))) {
+        HDperror("HDcalloc");
+        HDexit(EXIT_FAILURE);
+    }
+    for (i = 0; i < FAMILY_NUMBER; i++)
+        buf[i] = buf_data + (i * FAMILY_SIZE);
+
     /* Set property list and file name for FAMILY driver */
-    if ((fapl=H5Pcreate(H5P_FILE_ACCESS)) < 0) {
-        perror ("H5Pcreate");
-        exit (EXIT_FAILURE);
+    if ((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) {
+        HDperror("H5Pcreate");
+        HDexit(EXIT_FAILURE);
     }
 
     if(H5Pset_fapl_family(fapl, (hsize_t)FAMILY_SIZE, H5P_DEFAULT) < 0) {
-        perror ("H5Pset_fapl_family");
-        exit (EXIT_FAILURE);
+        HDperror("H5Pset_fapl_family");
+        HDexit(EXIT_FAILURE);
     }
 
     if((file = H5Fcreate(FILENAME, H5F_ACC_TRUNC, H5P_DEFAULT, fapl)) < 0) {
-        perror("H5Fcreate");
-        exit(EXIT_FAILURE);
+        HDperror("H5Fcreate");
+        HDexit(EXIT_FAILURE);
     }
 
     /* Create and write dataset */
     if((space = H5Screate_simple(2, dims, NULL)) < 0) {
-        perror("H5Screate_simple");
-        exit(EXIT_FAILURE);
+        HDperror("H5Screate_simple");
+        HDexit(EXIT_FAILURE);
     }
 
 
     if((dset = H5Dcreate2(file, dname, H5T_NATIVE_INT, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) {
-        perror("H5Dcreate2");
-        exit(EXIT_FAILURE);
+        HDperror("H5Dcreate2");
+        HDexit(EXIT_FAILURE);
     }
 
 
-    for(i = 0; i<FAMILY_NUMBER; i++)
-        for(j = 0; j<FAMILY_SIZE; j++)
+    for(i = 0; i < FAMILY_NUMBER; i++)
+        for(j = 0; j < FAMILY_SIZE; j++)
             buf[i][j] = i * 10000 + j;
 
-    if(H5Dwrite(dset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) {
-        perror("H5Dwrite");
-        exit(EXIT_FAILURE);
+    if(H5Dwrite(dset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_data) < 0) {
+        HDperror("H5Dwrite");
+        HDexit(EXIT_FAILURE);
     }
 
 
     if(H5Sclose(space) < 0) {
-        perror ("H5Sclose");
-        exit (EXIT_FAILURE);
+        HDperror("H5Sclose");
+        HDexit(EXIT_FAILURE);
     }
 
     if(H5Dclose(dset) < 0) {
-        perror ("H5Dclose");
-        exit (EXIT_FAILURE);
+        HDperror("H5Dclose");
+        HDexit(EXIT_FAILURE);
     }
 
     if(H5Pclose(fapl) < 0) {
-        perror ("H5Pclose");
-        exit (EXIT_FAILURE);
+        HDperror("H5Pclose");
+        HDexit(EXIT_FAILURE);
     }
 
     if(H5Fclose(file) < 0) {
-        perror ("H5Fclose");
-        exit (EXIT_FAILURE);
+        HDperror("H5Fclose");
+        HDexit(EXIT_FAILURE);
     }
 
-    puts(" PASSED"); fflush(stdout);
+    HDfree(buf);
+    HDfree(buf_data);
+
+    HDputs(" PASSED");
+    HDfflush(stdout);
 
-    return 0;
+    return EXIT_SUCCESS;
 }
diff --git a/tools/test/perform/pio_standalone.h b/tools/test/perform/pio_standalone.h
index e6db2e8..cf6d980 100644
--- a/tools/test/perform/pio_standalone.h
+++ b/tools/test/perform/pio_standalone.h
@@ -483,8 +483,8 @@ extern MPI_Info h5_io_info_g;         /* MPI INFO object for IO */
 #endif
 
 #ifdef H5_HAVE_PARALLEL
-H5TEST_DLL int h5_set_info_object(void);
-H5TEST_DLL void h5_dump_info_object(MPI_Info info);
+int h5_set_info_object(void);
+void h5_dump_info_object(MPI_Info info);
 #endif
 
 
diff --git a/tools/test/perform/sio_standalone.h b/tools/test/perform/sio_standalone.h
index faa8317..45f6d25 100644
--- a/tools/test/perform/sio_standalone.h
+++ b/tools/test/perform/sio_standalone.h
@@ -498,8 +498,8 @@ extern MPI_Info h5_io_info_g;         /* MPI INFO object for IO */
 #endif
 
 #ifdef H5_HAVE_PARALLEL
-H5TEST_DLL int h5_set_info_object(void);
-H5TEST_DLL void h5_dump_info_object(MPI_Info info);
+int h5_set_info_object(void);
+void h5_dump_info_object(MPI_Info info);
 #endif