Subfiling VFD (#1883)

* Added support for vector I/O calls to the VFD layer, and associated test code. Note that this includes the optimization to allow shortened sizes and types arrays to allow more space efficient representations of vectors in which all entries are of the same size and/or type. See the Selection I/o RFC for further details. Tested serial and parallel, debug and production on Charis. serial and parallel debug only on Jelly. * ran code formatter quick serial build and test on jelly * Add H5FD_read_selection() and H5FD_write_selection(). Currently only translate to scalar calls. Fix const buf in H5FD_write_vector(). * Format source * Fix comments * Add selection I/O to chunk code, used when: not using chunk cache, no datatype conversion, no I/O filters, no page buffer, not using collective I/O. Requires global variable H5_use_selection_io_g be set to TRUE. Implemented selection to vector I/O transaltion at the file driver layer. * Fix formatting unrelated to previous change to stop github from complaining. * Add full API support for selection I/O. Add tests for this. * Implement selection I/O for contiguous datasets. Fix bug in selection I/O translation. Add const qualifiers to some internal selection I/O routines to maintain const-correctness while avoiding memcpys. * Added vector read / write support to the MPIO VFD, with associated test code (see testpar/t_vfd.c). Note that this implementation does NOT support vector entries of size greater than 2 GB. This must be repaired before release, but it should be good enough for correctness testing. As MPIO requires vector I/O requests to be sorted in increasing address order, also added a vector sort utility in H5FDint.c This function is tested in passing by the MPIO vector I/O extension. In passing, repaired a bug in size / type vector extension management in H5FD_read/write_vector() Tested parallel debug and production on charis and Jelly. * Ran source code formatter * Add support for independent parallel I/O with selection I/O. Add HDF5_USE_SELECTION_IO env var to control selection I/O (default off). * Implement parallel collective support for selection I/O. * Fix comments and run formatter. * Update selection IO branch with develop (#1215) Merged branch 'develop' into selection_io * Sync with develop (#1262) Updated the branch with develop changes. * Implement big I/O support for vector I/O requests in the MPIO file driver. * Free arrays in H5FD__mpio_read/write_vector() as soon as they're not needed, to cut down on memory usage during I/O. * Address comments from code review. Fix const warnings with H5S_SEL_ITER_INIT(). * Committing clang-format changes * Feature/subfiling (#1464) * Initial checkin of merged sub-filing VFD. Passes regression tests (debug/shared/paralle) on Jelly. However, bugs and many compiler warnings remain -- not suitable for merge to develop. * Minor mods to src/H5FDsubfile_mpi.c to address errors reported by autogen.sh * Code formatting run -- no test * Merged my subfiling code fixes into the new selection_io_branch * Forgot to add the FindMERCURY.cmake file. This will probably disappear soon * attempting to make a more reliable subfile file open which doesn't return errors. For some unknown reason, the regular posix open will occasionally fail to create a subfile. Some better error handling for file close has been added. * added NULL option for H5FD_subfiling_config_t in H5Pset_fapl_subfiling (#1034) * NULL option automatically stacks IOC VFD for subfiling and returns a valid fapl. * added doxygen subfiling APIs * Various fixes which allow the IOR benchmark to run correctly * Lots of updates including the packaging up of the mercury_util source files to enable easier builds for our Benchmarking * Interim checkin of selection_io_with_subfiling_vfd branch Moddified testpar/t_vfd.c to test the subfiling vfd with default configuration. Must update this code to run with a variety of configurations -- most particularly multiple IO concentrators, and stripe depth small enough to test the other IO concentrators. testpar/t_vfd.c exposed a large number of race condidtions -- symtoms included: 1) Crashes (usually seg faults) 2) Heap corruption 3) Stack corruption 4) Double frees of heap space 5) Hangs 6) Out of order execution of I/O requests / violations of POSIX semantics 7) Swapped write requests Items 1 - 4 turned out to be primarily caused by file close issues -- specifically, the main I/O concentrator thread and its pool of worker threads were not being shut down properly on file close. Addressing this issue in combination with some other minor fixes seems to have addressed these issues. Items 5 & 6 appear to have been caused by issue of I/O requests to the thread pool in an order that did not maintain POSIX semantics. A rewrite of the I/O request dispatch code appears to have solved these issues. Item 7 seems to have been caused by multiple write requests from a given rank being read by the wrong worker thread. Code to issue "unique" tags for each write request via the ACK message appears to have cleaned this up. Note that the code is still in poor condtition. A partial list of known defects includes: a) Race condiditon on file close that allows superblock writes to arrive at the I/O concentrator after it has been shutdown. This defect is most evident when testpar/t_subfiling_vfd is run with 8 ranks. b) No error reporting from I/O concentrators -- must design and implement this. For now, mostly just asserts, which suggests that it should be run in debug mode. c) Much commented out and/or un-used code. d) Code orgnaization e) Build system with bits of Mercury is awkward -- think of shifting to pthreads with our own thread pool code. f) Need to add native support for vector and selection I/O to the subfiling VFD. g) Need to review, and posibly rework configuration code. h) Need to store subfile configuration data in a superblock extension message, and add code to use this data on file open. i) Test code is inadequate -- expect more issues as it is extended. In particular, there is no unit test code for the I/O request dispatch code. While I think it is correct at present, we need test code to verify this. Similarly, we need to test with multiple I/O concentrators and much smaller stripe depth. My actual code changes were limited to: src/H5FDioc.c src/H5FDioc_threads.c src/H5FDsubfile_int.c src/H5FDsubfile_mpi.c src/H5FDsubfiling.c src/H5FDsubfiling.h src/H5FDsubfiling_priv.h testpar/t_subfiling_vfd.c testpar/t_vfd.c I'm not sure what is going on with the deletions in src/mercury/src/util. Tested parallel/debug on Charis and Jelly * subfiling with selection IO (#1219) Merged branch 'selection_io' into subfiling branch. * Subfile name fixes (#1250) * fixed subfiling naming convention, and added leading zero to rank names. * Merge branch 'selection_io' into selection_io_with_subfiling_vfd (#1265) * Added script to join subfiles into a single HDF5 file (#1350) * Modified H5FD__subfiling_query() to report that the sub-filing VFD supports MPI This exposed issues with truncate and get EOF in the sub-filing VFD. I believe I have addressed these issues (get EOF not as fully tested as it should be), howeer, it exposed race conditions resulting in hangs. As of this writing, I have not been able to chase these down. Note that the tests that expose these race conditions are in testpar/t_subfiling_vfd.c, and are currently skipped. Unskip these tests to reproduce the race conditions. tested (to the extent possible) debug/parallel on charis and jelly. * Committing clang-format changes * fixed H5MM_free Co-authored-by: mainzer <mainzer#hdfgroup.org> Co-authored-by: jrmainzer <72230804+jrmainzer@users.noreply.github.com> Co-authored-by: Richard Warren <Richard.Warren@hdfgroup.org> Co-authored-by: Richard.Warren <richard.warren@jelly.ad.hdfgroup.org> Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Move Subfiling VFD components into H5FDsubfiling source directory * Update Autotools build and add H5_HAVE_SUBFILING_VFD macro to H5pubconf.h * Tidy up CMake build of subfiling sources * Merge branch 'develop' into feature/subfiling (#1539) Merge branch 'develop' into feature/subfiling * Add VFD interface version field to Subfiling and IOC VFDs * Merge branch 'develop' into feature/subfiling (#1557) Merge branch 'develop' into feature/subfiling * Merge branch 'develop' into feature/subfiling (#1563) Merge branch 'develop' into feature/subfiling * Tidy up merge artifacts after rebase on develop * Fix incorrect variable in mirror VFD utils CMake * Ensure VFD values are always defined * Add subfiling to CMake VFD_LIST if built * Mark MPI I/O driver self-initialization global as static * Add Subfiling VFD to predefined VFDs for HDF5_DRIVER env. variable * Initial progress towards separating private vs. public subfiling code * include libgen.h in t_vfd tests for correct dirname/basename * Committing clang-format changes * removed mercury option, included subfiling header path (#1577) Added subfiling status to configure output, installed h5fuse.sh to build directory for use in future tests. * added check for stdatomic.h (#1578) * added check for stdatomic.h with subfiling * added H5_HAVE_SUBFILING_VFD for cmake * fix old-style-definition warning (#1582) * fix old-style-definition warning * added test for enable parallel with subfiling VFD (#1586) Fails if subfiling VFD is not used with parallel support. * Subfiling/IOC VFD fixes and tidying (#1619) * Rename CMake option for Subfiling VFD to be consistent with other VFDs * Miscellaneous Subfiling fixes Add error message for unset MPI communicator Support dynamic loading of subfiling VFD with default configuration * Temporary fix for subfile name issue * Added subfile checks (#1634) * added subfile checks * Feature/subfiling (#1655) * Subfiling/IOC VFD cleanup Fix misuse of MPI_COMM_WORLD in IOC VFD Propagate Subfiling FAPL MPI settings down to IOC FAPL in default configuration case Cleanup IOC VFD debugging code Change sprintf to snprintf in a few places * Major work on separating Subfiling and IOC VFDs from each other * Re-write async_completion func to not overuse stack * Replace usage of MPI_COMM_WORLD with file's actual MPI communicator * Refactor H5FDsubfile_mpi.c * Remove empty file H5FDsubfile_mpi.c * Separate IOC VFD errors to its own error stack * Committing clang-format changes * Remove H5TRACE macros from H5FDioc.c * Integrate H5FDioc_threads.c with IOC error stack * Fix for subfile name generation Use number of I/O concentrators from existing subfiling configuration file, if one exists * Add temporary barrier in "Get EOF" operation to prevent races on EOF Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Fix for retrieval of machine Host ID * Default to MPI_COMM_WORLD if no MPI params set * added libs rt and pthreads (#1673) * added libs rt and pthreads * Feature/subfiling (#1689) * More tidying of IOC VFD and subfiling debug code * Remove old unused log file code * Clear FID from active file map on failure * Fix bug in generation of subfile names when truncating file * Change subfile names to start from 1 instead of 0 * Use long long for user-specified stripe size from environment variable * Skip 0-sized I/Os in low-level IOC I/O routines * Don't update EOF on read * Convert printed warning about data size mismatch to assertion * Don't add base file address to I/O addresses twice Base address should already be applied as part of H5FDwrite/read_vector calls * Account for 0-sized I/O vector entries in subfile write/read functions * Rewrite init_indep_io for clarity * Correction for IOC wraparound calculations * Some corrections to iovec calculations * Remove temporary barrier on EOF retrieval * Complete work request queue entry on error instead of skipping over * Account for stripe size wraparound for sf_col_offset calculation * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Re-write and fix bugs in I/O vector filling routines (#1703) * Rewrite I/O vector filling routines for clarity * Fix bug with iovec_fill_last when last I/O size is 0 * added subfiling_dir line read (#1714) * added subfiling_dir line read and use it * shellcheck fixes * I/O request dispatch logic update (#1731) Short-circuit I/O request dispatch when head of I/O queue is an in-progress get EOF or truncate operation. This prevents an issue where a write operation can be dispatched alongside a get EOF/truncate operation, whereas all I/O requests are supposed to be ineligible for dispatch until the get EOF/truncate is completed * h5fuse.sh.in clean-up (#1757) * Added command-line options * Committing clang-format changes * Align with changes from develop * Mimic MPI I/O VFD for EOF handling * Initialize context_id field for work request objects * Use logfile for some debugging information * Use atomic store to set IOC ready flag * Use separate communicator for sending file EOF data Minor IOC cleanup * Use H5_subfile_fid_to_context to get context ID for file in Subfiling VFD * IOVEC calculation fixes * Updates for debugging code * Minor fixes for threaded code * Committing clang-format changes * Use separate MPI communicator for barrier operations * Committing clang-format changes * Rewrite EOF routine to use nonblocking MPI communication * Committing clang-format changes * Always dispatch I/O work requests in IOC main loop * Return distinct MPI communicator to library when requested * Minor warning cleanup * Committing clang-format changes * Generate h5fuse.sh from h5fuse.sh.in in CMake * Send truncate messages to correct IOC rank * Committing clang-format changes * Miscellaneous cleanup Post some MPI receives before sends Free some duplicated MPI communicator/Info objects Remove unnecessary extra MPI_Barrier * Warning cleanup * Fix for leaked MPI communicator * Retrieve file EOF on single rank and bcast it * Fixes for a few failure paths * Cleanup of IOC file opens * Committing clang-format changes * Use plan MPI_Send for send of EOF messages * Always check MPI thread support level during Subfiling init * Committing clang-format changes * Handle a hang on failure when IOCs can't open subfiles * Committing clang-format changes * Refactor file open status consensus check * Committing clang-format changes * Fix for MPI_Comm_free being called after MPI_Finalize * Fix VFD test by setting MPI params before setting subfiling on FAPL * Update Subfiling VFD error handling and error stack usage * Improvements for Subfiling logfiles * Remove prototypes for currently unused routines * Disable I/O queue stat collecting by default * Remove unused serialization mutex variable * Update VFD testing to take subfiling VFD into account * Fix usage of global subfiling application layout object * Minor fixes for failure pathways * Keep track of the number of failures in an IOC I/O queue * Make sure not to exceed MPI_TAG_UB value for data communication messages * Committing clang-format changes * Update for rename of some H5FD 'ctl' opcodes * Always include Subfiling's public header files in hdf5.h * Remove old unused code and comments * Implement support for per-file I/O queues Allows the subfiling VFD to have multiple HDF5 files open simultaneously * Use simple MPI_Iprobe over unnecessary MPI_Improbe * Committing clang-format changes * Update HDF5 testing to query driver for H5FD_FEAT_DEFAULT_VFD_COMPATIBLE flag * Fix a few bugs related to file multi-opens * Avoid calling MPI routines if subfiling gets reinitialized * Fix issue when files are closed in a random order * Update HDF5 testing to query VFD for "using MPI" feature flag * Register atexit handler in subfiling VFD to call MPI_Finalize after HDF5 closes * Fail for collective I/O requests until support is implemented * Correct VOL test function prototypes * Minor cleanup of old code and comments * Update mercury dependency * Cleanup of subfiling configuration structure * Committing clang-format changes * Build system updates for Subfiling VFD * Fix possible hang on failure in t_vfd tests caused by mismatched MPI_Barrier calls * Copy subfiling IOC fapl in "fapl get" method * Mirror subfiling superblock writes to stub file for legacy POSIX-y HDF5 applications * Allow collective I/O for MPI_BYTE types and rank 0 bcast strategy * Committing clang-format changes * Use different scheme for subfiling write message MPI tag calculations * Committing clang-format changes * Avoid performing fstat calls on all MPI ranks * Add MPI_Barrier before finalizing IOC threads * Use try_lock in I/O queue dispatch to minimize contention from worker threads * Use simple Waitall for nonblocking I/O waits * Add configurable IOC main thread delay and try_lock option to I/O queue dispatch * Fix bug that could cause serialization of non-overlapping I/O requests * Temporarily treat collective subfiling vector I/O calls as independent * Removed unused mercury bits * Add stubs for subfiling and IOC file delete callback * Update VFD testing for Subfiling VFD * Work around HDF5 metadata cache bug for Subfiling VFD when MPI Comm size = 1 * Committing clang-format changes Co-authored-by: mainzer <mainzer#hdfgroup.org> Co-authored-by: Neil Fortner <nfortne2@hdfgroup.org> Co-authored-by: Scot Breitenfeld <brtnfld@hdfgroup.org> Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Co-authored-by: jrmainzer <72230804+jrmainzer@users.noreply.github.com> Co-authored-by: Richard Warren <Richard.Warren@hdfgroup.org> Co-authored-by: Richard.Warren <richard.warren@jelly.ad.hdfgroup.org>
author: jhendersonHDF <jhenderson@hdfgroup.org> 2022-07-22 20:03:12 (GMT)
committer: GitHub <noreply@github.com> 2022-07-22 20:03:12 (GMT)
commit: 27bb358f7ab1d23f3f8ce081c6b4f1602033e4d7 (patch)
tree: e8a69bdfbc16f9acf073ddb3ebff586eccfca009 /tools
parent: 32caa567a26680c5f98d0ea0cc989c45c89dc654 (diff)
download: hdf5-27bb358f7ab1d23f3f8ce081c6b4f1602033e4d7.zip
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hdf5-27bb358f7ab1d23f3f8ce081c6b4f1602033e4d7.tar.bz2
27 files changed, 154 insertions, 110 deletions
diff --git a/tools/lib/CMakeLists.txt b/tools/lib/CMakeLists.txt
index 6e4d3e6..f607b69 100644
--- a/tools/lib/CMakeLists.txt
+++ b/tools/lib/CMakeLists.txt
@@ -37,7 +37,7 @@ set (H5_TOOLS_LIB_HDRS
 if (NOT ONLY_SHARED_LIBS)
   add_library (${HDF5_TOOLS_LIB_TARGET} STATIC ${H5_TOOLS_LIB_SOURCES} ${H5_TOOLS_LIB_HDRS})
   target_include_directories (${HDF5_TOOLS_LIB_TARGET}
-      PRIVATE "${HDF5_TOOLS_LIB_SOURCE_DIR};${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      PRIVATE "${HDF5_TOOLS_LIB_SOURCE_DIR};${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
       INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
   )
   target_compile_options(${HDF5_TOOLS_LIB_TARGET} PRIVATE "${HDF5_CMAKE_C_FLAGS}")
@@ -57,7 +57,7 @@ endif ()
 if (BUILD_SHARED_LIBS)
   add_library (${HDF5_TOOLS_LIBSH_TARGET} SHARED ${H5_TOOLS_LIB_SOURCES} ${H5_TOOLS_LIB_HDRS})
   target_include_directories (${HDF5_TOOLS_LIBSH_TARGET}
-      PRIVATE "${HDF5_TOOLS_LIB_SOURCE_DIR};${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+      PRIVATE "${HDF5_TOOLS_LIB_SOURCE_DIR};${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
       INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
   )
   target_compile_options(${HDF5_TOOLS_LIBSH_TARGET} PRIVATE "${HDF5_CMAKE_C_FLAGS}")
diff --git a/tools/libtest/CMakeLists.txt b/tools/libtest/CMakeLists.txt
index 1332099..0435aa1 100644
--- a/tools/libtest/CMakeLists.txt
+++ b/tools/libtest/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_LIBTEST C)
 #-----------------------------------------------------------------------------
 add_executable (h5tools_test_utils ${HDF5_TOOLS_LIBTEST_SOURCE_DIR}/h5tools_test_utils.c)
 target_compile_options(h5tools_test_utils PRIVATE "${HDF5_CMAKE_C_FLAGS}")
-target_include_directories(h5tools_test_utils PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories(h5tools_test_utils PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT ONLY_SHARED_LIBS)
   TARGET_C_PROPERTIES (h5tools_test_utils STATIC)
   target_link_libraries (h5tools_test_utils PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET} ${HDF5_TEST_LIB_TARGET})
diff --git a/tools/src/h5copy/CMakeLists.txt b/tools/src/h5copy/CMakeLists.txt
index 2f924a2..3d4fbd1 100644
--- a/tools/src/h5copy/CMakeLists.txt
+++ b/tools/src/h5copy/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_SRC_H5COPY C)
 # --------------------------------------------------------------------
 if (NOT ONLY_SHARED_LIBS)
   add_executable (h5copy ${HDF5_TOOLS_SRC_H5COPY_SOURCE_DIR}/h5copy.c)
-  target_include_directories (h5copy PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5copy PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5copy PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5copy STATIC)
   target_link_libraries (h5copy PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -18,7 +18,7 @@ endif ()
 
 if (BUILD_SHARED_LIBS)
   add_executable (h5copy-shared ${HDF5_TOOLS_SRC_H5COPY_SOURCE_DIR}/h5copy.c)
-  target_include_directories (h5copy-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5copy-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5copy-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5copy-shared SHARED)
   target_link_libraries (h5copy-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
diff --git a/tools/src/h5diff/CMakeLists.txt b/tools/src/h5diff/CMakeLists.txt
index e54b2da..908371d 100644
--- a/tools/src/h5diff/CMakeLists.txt
+++ b/tools/src/h5diff/CMakeLists.txt
@@ -10,7 +10,7 @@ if (NOT ONLY_SHARED_LIBS)
       ${HDF5_TOOLS_SRC_H5DIFF_SOURCE_DIR}/h5diff_main.c
       ${HDF5_TOOLS_SRC_H5DIFF_SOURCE_DIR}/h5diff_common.h
   )
-  target_include_directories (h5diff PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5diff PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5diff PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   #target_compile_definitions (h5diff PRIVATE H5_TOOLS_DEBUG)
   TARGET_C_PROPERTIES (h5diff STATIC)
@@ -26,7 +26,7 @@ if (BUILD_SHARED_LIBS)
       ${HDF5_TOOLS_SRC_H5DIFF_SOURCE_DIR}/h5diff_main.c
       ${HDF5_TOOLS_SRC_H5DIFF_SOURCE_DIR}/h5diff_common.h
   )
-  target_include_directories (h5diff-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5diff-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5diff-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   #target_compile_definitions (h5diff-shared PRIVATE H5_TOOLS_DEBUG)
   TARGET_C_PROPERTIES (h5diff-shared SHARED)
@@ -54,7 +54,7 @@ if (H5_HAVE_PARALLEL)
         ${HDF5_TOOLS_SRC_H5DIFF_SOURCE_DIR}/h5diff_common.c
         ${HDF5_TOOLS_SRC_H5DIFF_SOURCE_DIR}/ph5diff_main.c
     )
-    target_include_directories (ph5diff PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+    target_include_directories (ph5diff PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
     target_compile_options(ph5diff PRIVATE "${HDF5_CMAKE_C_FLAGS}")
     TARGET_C_PROPERTIES (ph5diff STATIC)
     target_link_libraries (ph5diff PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET} "$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_LIBRARIES}>")
@@ -67,7 +67,7 @@ if (H5_HAVE_PARALLEL)
         ${HDF5_TOOLS_SRC_H5DIFF_SOURCE_DIR}/h5diff_common.c
         ${HDF5_TOOLS_SRC_H5DIFF_SOURCE_DIR}/ph5diff_main.c
     )
-    target_include_directories (ph5diff-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+    target_include_directories (ph5diff-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
     target_compile_options(ph5diff-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
     TARGET_C_PROPERTIES (ph5diff-shared SHARED)
     target_link_libraries (ph5diff-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET} "$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_LIBRARIES}>")
diff --git a/tools/src/h5dump/CMakeLists.txt b/tools/src/h5dump/CMakeLists.txt
index 8a12434..5e4f712 100644
--- a/tools/src/h5dump/CMakeLists.txt
+++ b/tools/src/h5dump/CMakeLists.txt
@@ -15,7 +15,7 @@ if (NOT ONLY_SHARED_LIBS)
       ${HDF5_TOOLS_SRC_H5DUMP_SOURCE_DIR}/h5dump_ddl.h
       ${HDF5_TOOLS_SRC_H5DUMP_SOURCE_DIR}/h5dump_xml.h
   )
-  target_include_directories (h5dump PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5dump PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5dump PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5dump STATIC)
   target_link_libraries (h5dump PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -36,7 +36,7 @@ if (BUILD_SHARED_LIBS)
       ${HDF5_TOOLS_SRC_H5DUMP_SOURCE_DIR}/h5dump_ddl.h
       ${HDF5_TOOLS_SRC_H5DUMP_SOURCE_DIR}/h5dump_xml.h
   )
-  target_include_directories (h5dump-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5dump-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5dump-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5dump-shared SHARED)
   target_link_libraries (h5dump-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
diff --git a/tools/src/h5format_convert/CMakeLists.txt b/tools/src/h5format_convert/CMakeLists.txt
index d0ddb32..6802bca 100644
--- a/tools/src/h5format_convert/CMakeLists.txt
+++ b/tools/src/h5format_convert/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_SRC_H5FC C)
 # --------------------------------------------------------------------
 if (NOT ONLY_SHARED_LIBS)
   add_executable (h5format_convert ${HDF5_TOOLS_SRC_H5FC_SOURCE_DIR}/h5format_convert.c)
-  target_include_directories (h5format_convert PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5format_convert PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5format_convert PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5format_convert STATIC)
   target_link_libraries (h5format_convert PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -17,7 +17,7 @@ if (NOT ONLY_SHARED_LIBS)
 endif ()
 if (BUILD_SHARED_LIBS)
   add_executable (h5format_convert-shared ${HDF5_TOOLS_SRC_H5FC_SOURCE_DIR}/h5format_convert.c)
-  target_include_directories (h5format_convert-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5format_convert-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5format_convert-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5format_convert-shared SHARED)
   target_link_libraries (h5format_convert-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
diff --git a/tools/src/h5import/CMakeLists.txt b/tools/src/h5import/CMakeLists.txt
index a7f238e..2f9adf9 100644
--- a/tools/src/h5import/CMakeLists.txt
+++ b/tools/src/h5import/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_SRC_H5IMPORT C)
 # --------------------------------------------------------------------
 if (NOT ONLY_SHARED_LIBS)
   add_executable (h5import ${HDF5_TOOLS_SRC_H5IMPORT_SOURCE_DIR}/h5import.c ${HDF5_TOOLS_SRC_H5IMPORT_SOURCE_DIR}/h5import.h)
-  target_include_directories (h5import PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5import PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5import STATIC)
   target_link_libraries (h5import PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
   #set_target_properties (h5import PROPERTIES COMPILE_DEFINITIONS H5DEBUGIMPORT)
@@ -18,7 +18,7 @@ endif ()
 
 if (BUILD_SHARED_LIBS)
   add_executable (h5import-shared ${HDF5_TOOLS_SRC_H5IMPORT_SOURCE_DIR}/h5import.c ${HDF5_TOOLS_SRC_H5IMPORT_SOURCE_DIR}/h5import.h)
-  target_include_directories (h5import-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5import-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5import-shared SHARED)
   target_link_libraries (h5import-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
   #set_target_properties (h5import-shared PROPERTIES COMPILE_DEFINITIONS H5DEBUGIMPORT)
diff --git a/tools/src/h5jam/CMakeLists.txt b/tools/src/h5jam/CMakeLists.txt
index 0a31215..7e971fb 100644
--- a/tools/src/h5jam/CMakeLists.txt
+++ b/tools/src/h5jam/CMakeLists.txt
@@ -6,14 +6,14 @@ project (HDF5_TOOLS_SRC_H5JAM C)
 # --------------------------------------------------------------------
 if (NOT ONLY_SHARED_LIBS)
   add_executable (h5jam ${HDF5_TOOLS_SRC_H5JAM_SOURCE_DIR}/h5jam.c)
-  target_include_directories (h5jam PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5jam PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5jam STATIC)
   target_link_libraries (h5jam PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
   set_target_properties (h5jam PROPERTIES FOLDER tools)
   set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5jam")
 
   add_executable (h5unjam ${HDF5_TOOLS_SRC_H5JAM_SOURCE_DIR}/h5unjam.c)
-  target_include_directories (h5unjam PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5unjam PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5unjam STATIC)
   target_link_libraries (h5unjam PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
   set_target_properties (h5unjam PROPERTIES FOLDER tools)
@@ -27,14 +27,14 @@ endif ()
 
 if (BUILD_SHARED_LIBS)
   add_executable (h5jam-shared ${HDF5_TOOLS_SRC_H5JAM_SOURCE_DIR}/h5jam.c)
-  target_include_directories (h5jam-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5jam-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5jam-shared SHARED)
   target_link_libraries (h5jam-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
   set_target_properties (h5jam-shared PROPERTIES FOLDER tools)
   set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5jam-shared")
 
   add_executable (h5unjam-shared ${HDF5_TOOLS_SRC_H5JAM_SOURCE_DIR}/h5unjam.c)
-  target_include_directories (h5unjam-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5unjam-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5unjam-shared SHARED)
   target_link_libraries (h5unjam-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
   set_target_properties (h5unjam-shared PROPERTIES FOLDER tools)
diff --git a/tools/src/h5ls/CMakeLists.txt b/tools/src/h5ls/CMakeLists.txt
index 80b9b0c..d208cf8 100644
--- a/tools/src/h5ls/CMakeLists.txt
+++ b/tools/src/h5ls/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_SRC_H5LS C)
 #-----------------------------------------------------------------------------
 if (NOT ONLY_SHARED_LIBS)
   add_executable (h5ls ${HDF5_TOOLS_SRC_H5LS_SOURCE_DIR}/h5ls.c)
-  target_include_directories (h5ls PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5ls PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5ls PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   #target_compile_definitions(h5ls PRIVATE H5_TOOLS_DEBUG)
   TARGET_C_PROPERTIES (h5ls STATIC)
@@ -19,7 +19,7 @@ endif ()
 
 if (BUILD_SHARED_LIBS)
   add_executable (h5ls-shared ${HDF5_TOOLS_SRC_H5LS_SOURCE_DIR}/h5ls.c)
-  target_include_directories (h5ls-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5ls-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5ls-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   #target_compile_definitions(h5ls-shared PRIVATE H5_TOOLS_DEBUG)
   TARGET_C_PROPERTIES (h5ls-shared SHARED)
diff --git a/tools/src/h5perf/CMakeLists.txt b/tools/src/h5perf/CMakeLists.txt
index bc6f60e..80853f0 100644
--- a/tools/src/h5perf/CMakeLists.txt
+++ b/tools/src/h5perf/CMakeLists.txt
@@ -9,7 +9,7 @@ set (h5perf_serial_SOURCES
     ${HDF5_TOOLS_SRC_H5PERF_SOURCE_DIR}/sio_engine.c
 )
 add_executable (h5perf_serial ${h5perf_serial_SOURCES})
-target_include_directories (h5perf_serial PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (h5perf_serial PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT ONLY_SHARED_LIBS)
   TARGET_C_PROPERTIES (h5perf_serial STATIC)
   target_link_libraries (h5perf_serial PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -35,7 +35,7 @@ if (H5_HAVE_PARALLEL)
       ${HDF5_TOOLS_SRC_H5PERF_SOURCE_DIR}/pio_engine.c
   )
   add_executable (h5perf ${h5perf_SOURCES})
-  target_include_directories (h5perf PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5perf PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   if (NOT ONLY_SHARED_LIBS)
     TARGET_C_PROPERTIES (h5perf STATIC)
     target_link_libraries (h5perf PRIVATE ${LINK_LIBS} ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}  "$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_LIBRARIES}>")
diff --git a/tools/src/h5repack/CMakeLists.txt b/tools/src/h5repack/CMakeLists.txt
index b8b4709..f6df8a9 100644
--- a/tools/src/h5repack/CMakeLists.txt
+++ b/tools/src/h5repack/CMakeLists.txt
@@ -17,7 +17,7 @@ set (REPACK_COMMON_SOURCES
 
 if (NOT ONLY_SHARED_LIBS)
   add_executable (h5repack ${REPACK_COMMON_SOURCES} ${HDF5_TOOLS_SRC_H5REPACK_SOURCE_DIR}/h5repack_main.c)
-  target_include_directories (h5repack PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5repack PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5repack PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5repack STATIC)
   target_link_libraries (h5repack PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -29,7 +29,7 @@ endif ()
 
 if (BUILD_SHARED_LIBS)
   add_executable (h5repack-shared ${REPACK_COMMON_SOURCES} ${HDF5_TOOLS_SRC_H5REPACK_SOURCE_DIR}/h5repack_main.c)
-  target_include_directories (h5repack-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5repack-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5repack-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5repack-shared SHARED)
   target_link_libraries (h5repack-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
diff --git a/tools/src/h5stat/CMakeLists.txt b/tools/src/h5stat/CMakeLists.txt
index 88c0d3d..974cc6e 100644
--- a/tools/src/h5stat/CMakeLists.txt
+++ b/tools/src/h5stat/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_SRC_H5STAT C)
 # --------------------------------------------------------------------
 if (NOT ONLY_SHARED_LIBS)
   add_executable (h5stat ${HDF5_TOOLS_SRC_H5STAT_SOURCE_DIR}/h5stat.c)
-  target_include_directories (h5stat PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5stat PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5stat PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5stat STATIC)
   target_link_libraries (h5stat PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -18,7 +18,7 @@ endif ()
 
 if (BUILD_SHARED_LIBS)
   add_executable (h5stat-shared ${HDF5_TOOLS_SRC_H5STAT_SOURCE_DIR}/h5stat.c)
-  target_include_directories (h5stat-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5stat-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5stat-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5stat-shared SHARED)
   target_link_libraries (h5stat-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
diff --git a/tools/src/misc/CMakeLists.txt b/tools/src/misc/CMakeLists.txt
index 8811f97..70e90f3 100644
--- a/tools/src/misc/CMakeLists.txt
+++ b/tools/src/misc/CMakeLists.txt
@@ -7,7 +7,7 @@ project (HDF5_TOOLS_SRC_MISC C)
 #-- Misc Executables
 if (NOT ONLY_SHARED_LIBS)
   add_executable (h5debug ${HDF5_TOOLS_SRC_MISC_SOURCE_DIR}/h5debug.c)
-  target_include_directories (h5debug PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5debug PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5debug PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5debug STATIC)
   target_link_libraries (h5debug PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -15,7 +15,7 @@ if (NOT ONLY_SHARED_LIBS)
   set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5debug")
 
   add_executable (h5repart ${HDF5_TOOLS_SRC_MISC_SOURCE_DIR}/h5repart.c)
-  target_include_directories (h5repart PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5repart PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5repart PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5repart STATIC)
   target_link_libraries (h5repart PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -23,7 +23,7 @@ if (NOT ONLY_SHARED_LIBS)
   set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5repart")
 
   add_executable (h5mkgrp ${HDF5_TOOLS_SRC_MISC_SOURCE_DIR}/h5mkgrp.c)
-  target_include_directories (h5mkgrp PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5mkgrp PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5mkgrp PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5mkgrp STATIC)
   target_link_libraries (h5mkgrp PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -31,7 +31,7 @@ if (NOT ONLY_SHARED_LIBS)
   set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5mkgrp")
 
   add_executable (h5clear ${HDF5_TOOLS_SRC_MISC_SOURCE_DIR}/h5clear.c)
-  target_include_directories (h5clear PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5clear PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5clear PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5clear STATIC)
   target_link_libraries (h5clear PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -39,7 +39,7 @@ if (NOT ONLY_SHARED_LIBS)
   set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5clear")
 
   add_executable (h5delete ${HDF5_TOOLS_SRC_MISC_SOURCE_DIR}/h5delete.c)
-  target_include_directories (h5delete PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5delete PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5delete PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5delete STATIC)
   target_link_libraries (h5delete PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -56,7 +56,7 @@ if (NOT ONLY_SHARED_LIBS)
 endif ()
 if (BUILD_SHARED_LIBS)
   add_executable (h5debug-shared ${HDF5_TOOLS_SRC_MISC_SOURCE_DIR}/h5debug.c)
-  target_include_directories (h5debug-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5debug-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5debug-shared SHARED)
   target_compile_options(h5debug-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   target_link_libraries (h5debug-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
@@ -64,7 +64,7 @@ if (BUILD_SHARED_LIBS)
   set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5debug-shared")
 
   add_executable (h5repart-shared ${HDF5_TOOLS_SRC_MISC_SOURCE_DIR}/h5repart.c)
-  target_include_directories (h5repart-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5repart-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5repart-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5repart-shared SHARED)
   target_link_libraries (h5repart-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
@@ -72,7 +72,7 @@ if (BUILD_SHARED_LIBS)
   set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5repart-shared")
 
   add_executable (h5mkgrp-shared ${HDF5_TOOLS_SRC_MISC_SOURCE_DIR}/h5mkgrp.c)
-  target_include_directories (h5mkgrp-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5mkgrp-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5mkgrp-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5mkgrp-shared SHARED)
   target_link_libraries (h5mkgrp-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
@@ -80,7 +80,7 @@ if (BUILD_SHARED_LIBS)
   set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5mkgrp-shared")
 
   add_executable (h5clear-shared ${HDF5_TOOLS_SRC_MISC_SOURCE_DIR}/h5clear.c)
-  target_include_directories (h5clear-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5clear-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5clear-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5clear-shared SHARED)
   target_link_libraries (h5clear-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
@@ -88,7 +88,7 @@ if (BUILD_SHARED_LIBS)
   set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5clear-shared")
 
   add_executable (h5delete-shared ${HDF5_TOOLS_SRC_MISC_SOURCE_DIR}/h5delete.c)
-  target_include_directories (h5delete-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5delete-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   target_compile_options(h5delete-shared PRIVATE "${HDF5_CMAKE_C_FLAGS}")
   TARGET_C_PROPERTIES (h5delete-shared SHARED)
   target_link_libraries (h5delete-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET})
diff --git a/tools/test/h5copy/CMakeLists.txt b/tools/test/h5copy/CMakeLists.txt
index f63eb84..b89344f 100644
--- a/tools/test/h5copy/CMakeLists.txt
+++ b/tools/test/h5copy/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_TEST_H5COPY C)
 # --------------------------------------------------------------------
 if (HDF5_BUILD_GENERATORS AND NOT ONLY_SHARED_LIBS)
   add_executable (h5copygentest ${HDF5_TOOLS_TEST_H5COPY_SOURCE_DIR}/h5copygentest.c)
-  target_include_directories (h5copygentest PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5copygentest PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5copygentest STATIC)
   target_link_libraries (h5copygentest PRIVATE ${HDF5_LIB_TARGET})
   set_target_properties (h5copygentest PROPERTIES FOLDER generator/tools)
@@ -30,7 +30,7 @@ if (BUILD_SHARED_LIBS)
   set (H5COPY_TOOL_PLUGIN_LIB_TARGET           ${H5COPY_TOOL_PLUGIN_LIB_CORENAME})
 
   add_library (${H5COPY_TOOL_PLUGIN_LIB_TARGET} SHARED dynlib_copy.c)
-  target_include_directories (${H5COPY_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (${H5COPY_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (${H5COPY_TOOL_PLUGIN_LIB_TARGET} SHARED)
   target_link_libraries (${H5COPY_TOOL_PLUGIN_LIB_TARGET} PRIVATE ${HDF5_LIBSH_TARGET})
   H5_SET_LIB_OPTIONS (${H5COPY_TOOL_PLUGIN_LIB_TARGET} ${H5COPY_TOOL_PLUGIN_LIB_NAME} SHARED "LIB")
diff --git a/tools/test/h5diff/CMakeLists.txt b/tools/test/h5diff/CMakeLists.txt
index f74db0f..21a65fc 100644
--- a/tools/test/h5diff/CMakeLists.txt
+++ b/tools/test/h5diff/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_TEST_H5DIFF C)
 # --------------------------------------------------------------------
 if (HDF5_BUILD_GENERATORS AND NOT ONLY_SHARED_LIBS)
   add_executable (h5diffgentest ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/h5diffgentest.c)
-  target_include_directories (h5diffgentest PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5diffgentest PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5diffgentest STATIC)
   target_link_libraries (h5diffgentest PRIVATE ${HDF5_LIB_TARGET})
   set_target_properties (h5diffgentest PROPERTIES FOLDER generator/tools)
@@ -30,7 +30,7 @@ if (BUILD_SHARED_LIBS)
   set (H5DIFF_TOOL_PLUGIN_LIB_TARGET           ${H5DIFF_TOOL_PLUGIN_LIB_CORENAME})
 
   add_library (${H5DIFF_TOOL_PLUGIN_LIB_TARGET} SHARED dynlib_diff.c)
-  target_include_directories (${H5DIFF_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (${H5DIFF_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (${H5DIFF_TOOL_PLUGIN_LIB_TARGET} SHARED)
   target_link_libraries (${H5DIFF_TOOL_PLUGIN_LIB_TARGET} PRIVATE ${HDF5_LIBSH_TARGET})
   H5_SET_LIB_OPTIONS (${H5DIFF_TOOL_PLUGIN_LIB_TARGET} ${H5DIFF_TOOL_PLUGIN_LIB_NAME} SHARED "LIB")
diff --git a/tools/test/h5dump/CMakeLists.txt b/tools/test/h5dump/CMakeLists.txt
index a7b4846..417a66e 100644
--- a/tools/test/h5dump/CMakeLists.txt
+++ b/tools/test/h5dump/CMakeLists.txt
@@ -10,7 +10,7 @@ if (BUILD_SHARED_LIBS)
   set (H5DUMP_TOOL_PLUGIN_LIB_TARGET           ${H5DUMP_TOOL_PLUGIN_LIB_CORENAME})
 
   add_library (${H5DUMP_TOOL_PLUGIN_LIB_TARGET} SHARED dynlib_dump.c)
-  target_include_directories (${H5DUMP_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (${H5DUMP_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (${H5DUMP_TOOL_PLUGIN_LIB_TARGET} SHARED)
   target_link_libraries (${H5DUMP_TOOL_PLUGIN_LIB_TARGET} PRIVATE ${HDF5_LIBSH_TARGET})
   H5_SET_LIB_OPTIONS (${H5DUMP_TOOL_PLUGIN_LIB_TARGET} ${H5DUMP_TOOL_PLUGIN_LIB_NAME} SHARED "LIB")
@@ -42,7 +42,7 @@ endif ()
 # --------------------------------------------------------------------
 if (HDF5_BUILD_GENERATORS AND NOT ONLY_SHARED_LIBS)
   add_executable (h5dumpgentest ${HDF5_TOOLS_TEST_H5DUMP_SOURCE_DIR}/h5dumpgentest.c)
-  target_include_directories (h5dumpgentest PRIVATE "${HDF5_SRC_DIR};${HDF5_TEST_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5dumpgentest PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_TEST_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5dumpgentest STATIC)
   target_link_libraries (h5dumpgentest PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
   set_target_properties (h5dumpgentest PROPERTIES FOLDER generator/tools)
diff --git a/tools/test/h5format_convert/CMakeLists.txt b/tools/test/h5format_convert/CMakeLists.txt
index 34a3c7b..9b647e8 100644
--- a/tools/test/h5format_convert/CMakeLists.txt
+++ b/tools/test/h5format_convert/CMakeLists.txt
@@ -5,7 +5,7 @@ project (HDF5_TOOLS_TEST_H5FC C)
 # Add the h5format_convert test executables
 # --------------------------------------------------------------------
 add_executable (h5fc_chk_idx ${HDF5_TOOLS_TEST_H5FC_SOURCE_DIR}/h5fc_chk_idx.c)
-target_include_directories (h5fc_chk_idx PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (h5fc_chk_idx PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT ONLY_SHARED_LIBS)
   TARGET_C_PROPERTIES (h5fc_chk_idx STATIC)
   target_link_libraries (h5fc_chk_idx PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -24,7 +24,7 @@ endif ()
 
 if (HDF5_BUILD_GENERATORS AND NOT ONLY_SHARED_LIBS)
   add_executable (h5fc_gentest ${HDF5_TOOLS_TEST_H5FC_SOURCE_DIR}/h5fc_gentest.c)
-  target_include_directories (h5fc_gentest PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5fc_gentest PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5fc_gentest STATIC)
   target_link_libraries (h5fc_gentest PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
   set_target_properties (h5fc_gentest PROPERTIES FOLDER generator/tools)
diff --git a/tools/test/h5import/CMakeLists.txt b/tools/test/h5import/CMakeLists.txt
index e8b5bce..990e6e6 100644
--- a/tools/test/h5import/CMakeLists.txt
+++ b/tools/test/h5import/CMakeLists.txt
@@ -5,7 +5,7 @@ project (HDF5_TOOLS_TEST_H5IMPORT C)
 # Add the h5import executables
 # --------------------------------------------------------------------
 add_executable (h5importtest ${HDF5_TOOLS_TEST_H5IMPORT_SOURCE_DIR}/h5importtest.c)
-target_include_directories (h5importtest PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (h5importtest PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT ONLY_SHARED_LIBS)
   TARGET_C_PROPERTIES (h5importtest STATIC)
   target_link_libraries (h5importtest PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
diff --git a/tools/test/h5jam/CMakeLists.txt b/tools/test/h5jam/CMakeLists.txt
index 9da7080..0cc3f04 100644
--- a/tools/test/h5jam/CMakeLists.txt
+++ b/tools/test/h5jam/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_TEST_H5JAM C)
 # --------------------------------------------------------------------
 if (HDF5_BUILD_GENERATORS AND NOT ONLY_SHARED_LIBS)
   add_executable (h5jamgentest ${HDF5_TOOLS_TEST_H5JAM_SOURCE_DIR}/h5jamgentest.c)
-  target_include_directories (h5jamgentest PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5jamgentest PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5jamgentest STATIC)
   target_link_libraries (h5jamgentest PRIVATE ${HDF5_LIB_TARGET})
   set_target_properties (h5jamgentest PROPERTIES FOLDER generator/tools)
@@ -22,7 +22,7 @@ if (HDF5_BUILD_GENERATORS AND NOT ONLY_SHARED_LIBS)
 endif ()
 
 add_executable (getub ${HDF5_TOOLS_TEST_H5JAM_SOURCE_DIR}/getub.c)
-target_include_directories (getub PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (getub PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT ONLY_SHARED_LIBS)
   TARGET_C_PROPERTIES (getub STATIC)
   target_link_libraries (getub PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -33,7 +33,7 @@ endif ()
 set_target_properties (getub PROPERTIES FOLDER tools)
 
 add_executable (tellub ${HDF5_TOOLS_TEST_H5JAM_SOURCE_DIR}/tellub.c)
-target_include_directories (tellub PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (tellub PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT ONLY_SHARED_LIBS)
   TARGET_C_PROPERTIES (tellub STATIC)
   target_link_libraries (tellub PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
diff --git a/tools/test/h5ls/CMakeLists.txt b/tools/test/h5ls/CMakeLists.txt
index ba6e468..b6c1057 100644
--- a/tools/test/h5ls/CMakeLists.txt
+++ b/tools/test/h5ls/CMakeLists.txt
@@ -10,7 +10,7 @@ if (BUILD_SHARED_LIBS)
   set (H5LS_TOOL_PLUGIN_LIB_TARGET           ${H5LS_TOOL_PLUGIN_LIB_CORENAME})
 
   add_library (${H5LS_TOOL_PLUGIN_LIB_TARGET} SHARED dynlib_ls.c)
-  target_include_directories (${H5LS_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (${H5LS_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (${H5LS_TOOL_PLUGIN_LIB_TARGET} SHARED)
   target_link_libraries (${H5LS_TOOL_PLUGIN_LIB_TARGET} PRIVATE ${HDF5_LIBSH_TARGET})
   H5_SET_LIB_OPTIONS (${H5LS_TOOL_PLUGIN_LIB_TARGET} ${H5LS_TOOL_PLUGIN_LIB_NAME} SHARED "LIB")
diff --git a/tools/test/h5repack/CMakeLists.txt b/tools/test/h5repack/CMakeLists.txt
index 0b90750..6772df6 100644
--- a/tools/test/h5repack/CMakeLists.txt
+++ b/tools/test/h5repack/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_TEST_H5REPACK C)
 # --------------------------------------------------------------------
 add_executable (testh5repack_detect_szip ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testh5repack_detect_szip.c)
 target_include_directories (testh5repack_detect_szip
-    PRIVATE "${HDF5_TOOLS_SRC_H5REPACK_SOURCE_DIR};${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+    PRIVATE "${HDF5_TOOLS_SRC_H5REPACK_SOURCE_DIR};${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
 )
 if (NOT ONLY_SHARED_LIBS)
   TARGET_C_PROPERTIES (testh5repack_detect_szip STATIC)
@@ -29,7 +29,7 @@ set (REPACK_COMMON_SOURCES
 )
 add_executable (h5repacktest ${REPACK_COMMON_SOURCES} ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/h5repacktst.c)
 target_include_directories (h5repacktest
-    PRIVATE "${HDF5_TOOLS_SRC_H5REPACK_SOURCE_DIR};${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_TEST_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
+    PRIVATE "${HDF5_TOOLS_SRC_H5REPACK_SOURCE_DIR};${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_INCLUDE_DIRS};${HDF5_TEST_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
 )
 if (NOT ONLY_SHARED_LIBS)
   TARGET_C_PROPERTIES (h5repacktest STATIC)
@@ -52,13 +52,13 @@ if (BUILD_SHARED_LIBS)
   set (H5REPACK_TOOL_PLUGIN_LIB_VTARGET          ${H5REPACK_TOOL_PLUGIN_LIB_VCORENAME})
 
   add_library (${H5REPACK_TOOL_PLUGIN_LIB_TARGET} SHARED dynlib_rpk.c)
-  target_include_directories (${H5REPACK_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (${H5REPACK_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (${H5REPACK_TOOL_PLUGIN_LIB_TARGET} SHARED)
   target_link_libraries (${H5REPACK_TOOL_PLUGIN_LIB_TARGET} PRIVATE ${HDF5_LIBSH_TARGET})
   H5_SET_LIB_OPTIONS (${H5REPACK_TOOL_PLUGIN_LIB_TARGET} ${H5REPACK_TOOL_PLUGIN_LIB_NAME} SHARED "LIB")
 
   add_library (${H5REPACK_TOOL_PLUGIN_LIB_VTARGET} SHARED dynlib_vrpk.c)
-  target_include_directories (${H5REPACK_TOOL_PLUGIN_LIB_VTARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (${H5REPACK_TOOL_PLUGIN_LIB_VTARGET} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (${H5REPACK_TOOL_PLUGIN_LIB_VTARGET} SHARED)
   target_link_libraries (${H5REPACK_TOOL_PLUGIN_LIB_VTARGET} PRIVATE ${HDF5_LIBSH_TARGET})
   H5_SET_LIB_OPTIONS (${H5REPACK_TOOL_PLUGIN_LIB_VTARGET} ${H5REPACK_TOOL_PLUGIN_LIB_VNAME} SHARED "LIB")
@@ -99,7 +99,7 @@ endif ()
 # --------------------------------------------------------------------
 if (HDF5_BUILD_GENERATORS AND NOT ONLY_SHARED_LIBS)
   add_executable (h5repackgentest ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/h5repackgentest.c)
-  target_include_directories (h5repackgentest PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5repackgentest PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5repackgentest STATIC)
   target_link_libraries (h5repackgentest PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
   set_target_properties (h5repackgentest PROPERTIES FOLDER generator/tools)
diff --git a/tools/test/h5repack/CMakeVFDTests.cmake b/tools/test/h5repack/CMakeVFDTests.cmake
index f8ac10b..0514bfb 100644
--- a/tools/test/h5repack/CMakeVFDTests.cmake
+++ b/tools/test/h5repack/CMakeVFDTests.cmake
@@ -17,6 +17,10 @@
 ##############################################################################
 H5_CREATE_VFD_DIR()
 
+set (H5REPACK_VFD_subfiling_SKIP_TESTS
+  h5repacktest
+)
+
 ##############################################################################
 ##############################################################################
 ###           T H E   T E S T S  M A C R O S                               ###
@@ -61,20 +65,22 @@ macro (ADD_VFD_TEST vfdname resultcode)
               h5repack_paged_persist.h5
         WORKING_DIRECTORY ${PROJECT_BINARY_DIR}/${vfdname}
     )
-    add_test (
-        NAME H5REPACK_VFD-${vfdname}-h5repacktest
-        COMMAND "${CMAKE_COMMAND}"
-            -D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}"
-            -D "TEST_PROGRAM=$<TARGET_FILE:h5repacktest>"
-            -D "TEST_ARGS:STRING="
-            -D "TEST_VFD:STRING=${vfdname}"
-            -D "TEST_EXPECT=${resultcode}"
-            -D "TEST_OUTPUT=${vfdname}-h5repacktest.out"
-            -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/${vfdname}"
-            -P "${HDF_RESOURCES_DIR}/vfdTest.cmake"
-    )
-    set_tests_properties (H5REPACK_VFD-${vfdname}-h5repacktest PROPERTIES DEPENDS H5REPACK_VFD-${vfdname}-h5repacktest-clear-objects)
-    set_tests_properties (H5REPACK_VFD-${vfdname}-h5repacktest PROPERTIES TIMEOUT ${CTEST_SHORT_TIMEOUT})
+    if (NOT "h5repacktest" IN_LIST H5REPACK_VFD_${vfdname}_SKIP_TESTS)
+      add_test (
+          NAME H5REPACK_VFD-${vfdname}-h5repacktest
+          COMMAND "${CMAKE_COMMAND}"
+              -D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}"
+              -D "TEST_PROGRAM=$<TARGET_FILE:h5repacktest>"
+              -D "TEST_ARGS:STRING="
+              -D "TEST_VFD:STRING=${vfdname}"
+              -D "TEST_EXPECT=${resultcode}"
+              -D "TEST_OUTPUT=${vfdname}-h5repacktest.out"
+              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/${vfdname}"
+              -P "${HDF_RESOURCES_DIR}/vfdTest.cmake"
+      )
+      set_tests_properties (H5REPACK_VFD-${vfdname}-h5repacktest PROPERTIES DEPENDS H5REPACK_VFD-${vfdname}-h5repacktest-clear-objects)
+      set_tests_properties (H5REPACK_VFD-${vfdname}-h5repacktest PROPERTIES TIMEOUT ${CTEST_SHORT_TIMEOUT})
+    endif ()
   endif ()
 endmacro ()
 
diff --git a/tools/test/h5repack/h5repacktst.c b/tools/test/h5repack/h5repacktst.c
index b89a501..da4ea54 100644
--- a/tools/test/h5repack/h5repacktst.c
+++ b/tools/test/h5repack/h5repacktst.c
@@ -183,6 +183,7 @@ main(void)
 
     h5_stat_t      file_stat;
     h5_stat_size_t fsize1, fsize2; /* file sizes */
+    hbool_t        driver_is_parallel;
 #if defined(H5_HAVE_FILTER_SZIP)
     int szip_can_encode = 0;
 #endif
@@ -206,6 +207,9 @@ main(void)
         GOERROR;
     PASSED();
 
+    if (h5_using_parallel_driver(H5P_DEFAULT, &driver_is_parallel) < 0)
+        GOERROR;
+
     /*-------------------------------------------------------------------------
      * Format of the tests:
      *
@@ -391,7 +395,7 @@ main(void)
      * file with all kinds of dataset datatypes
      *-------------------------------------------------------------------------
      */
-    if (!h5_using_parallel_driver(NULL)) {
+    if (!driver_is_parallel) {
         TESTING("    copy of datasets (all datatypes)");
         if (h5repack_init(&pack_options, 0, FALSE) < 0)
             GOERROR;
@@ -1516,7 +1520,7 @@ main(void)
      * test --latest options
      *-------------------------------------------------------------------------
      */
-    if (!h5_using_parallel_driver(NULL)) {
+    if (!driver_is_parallel) {
         TESTING("    latest file format options");
         if (h5repack_init(&pack_options, 0, FALSE) < 0)
             GOERROR;
@@ -1759,6 +1763,10 @@ make_testfiles(void)
     hid_t    fcpl = H5I_INVALID_HID; /* File creation property list */
     hid_t    fapl = H5I_INVALID_HID; /* File access property list */
     unsigned j;                      /* Local index variable */
+    hbool_t  driver_is_parallel;
+
+    if (h5_using_parallel_driver(H5P_DEFAULT, &driver_is_parallel) < 0)
+        return -1;
 
     /*-------------------------------------------------------------------------
      * create a file for general copy test
@@ -1775,7 +1783,7 @@ make_testfiles(void)
      * create another file for general copy test (all datatypes)
      *-------------------------------------------------------------------------
      */
-    if (!h5_using_parallel_driver(NULL)) {
+    if (!driver_is_parallel) {
         if ((fid = H5Fcreate(FNAME1, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT)) < 0)
             return -1;
         if (make_all_objects(fid) < 0)
@@ -1978,7 +1986,7 @@ make_testfiles(void)
     if (H5Fclose(fid) < 0)
         return -1;
 
-    if (!h5_using_parallel_driver(NULL)) {
+    if (!driver_is_parallel) {
         /*-------------------------------------------------------------------------
          * create obj and region reference type datasets (bug1814)
          * add attribute with int type (bug1726)
@@ -2780,12 +2788,18 @@ make_nbit(hid_t loc_id)
         goto error;
 
 #ifdef H5_HAVE_PARALLEL
-    /* Set up collective writes for parallel driver */
-    if (h5_using_parallel_driver(NULL)) {
-        if ((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0)
-            goto error;
-        if (H5Pset_dxpl_mpio(dxpl, H5FD_MPIO_COLLECTIVE) < 0)
+    {
+        hbool_t driver_is_parallel;
+
+        /* Set up collective writes for parallel driver */
+        if (h5_using_parallel_driver(H5P_DEFAULT, &driver_is_parallel) < 0)
             goto error;
+        if (driver_is_parallel) {
+            if ((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0)
+                goto error;
+            if (H5Pset_dxpl_mpio(dxpl, H5FD_MPIO_COLLECTIVE) < 0)
+                goto error;
+        }
     }
 #endif
 
@@ -2882,12 +2896,18 @@ make_scaleoffset(hid_t loc_id)
         goto error;
 
 #ifdef H5_HAVE_PARALLEL
-    /* Set up collective writes for parallel driver */
-    if (h5_using_parallel_driver(NULL)) {
-        if ((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0)
-            goto error;
-        if (H5Pset_dxpl_mpio(dxpl, H5FD_MPIO_COLLECTIVE) < 0)
+    {
+        hbool_t driver_is_parallel;
+
+        if (h5_using_parallel_driver(H5P_DEFAULT, &driver_is_parallel) < 0)
             goto error;
+        /* Set up collective writes for parallel driver */
+        if (driver_is_parallel) {
+            if ((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0)
+                goto error;
+            if (H5Pset_dxpl_mpio(dxpl, H5FD_MPIO_COLLECTIVE) < 0)
+                goto error;
+        }
     }
 #endif
 
@@ -2985,12 +3005,18 @@ make_all_filters(hid_t loc_id)
         goto error;
 
 #ifdef H5_HAVE_PARALLEL
-    /* Set up collective writes for parallel driver */
-    if (h5_using_parallel_driver(NULL)) {
-        if ((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0)
-            goto error;
-        if (H5Pset_dxpl_mpio(dxpl, H5FD_MPIO_COLLECTIVE) < 0)
+    {
+        hbool_t driver_is_parallel;
+
+        if (h5_using_parallel_driver(H5P_DEFAULT, &driver_is_parallel) < 0)
             goto error;
+        /* Set up collective writes for parallel driver */
+        if (driver_is_parallel) {
+            if ((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0)
+                goto error;
+            if (H5Pset_dxpl_mpio(dxpl, H5FD_MPIO_COLLECTIVE) < 0)
+                goto error;
+        }
     }
 #endif
 
@@ -5888,12 +5914,18 @@ make_dset(hid_t loc_id, const char *name, hid_t sid, hid_t dcpl, void *buf)
         return -1;
 
 #ifdef H5_HAVE_PARALLEL
-    /* Set up collective writes for parallel driver */
-    if (h5_using_parallel_driver(NULL)) {
-        if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0)
-            goto out;
-        if (H5Pset_dxpl_mpio(dxpl_id, H5FD_MPIO_COLLECTIVE) < 0)
+    {
+        hbool_t driver_is_parallel;
+
+        if (h5_using_parallel_driver(H5P_DEFAULT, &driver_is_parallel) < 0)
             goto out;
+        /* Set up collective writes for parallel driver */
+        if (driver_is_parallel) {
+            if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0)
+                goto out;
+            if (H5Pset_dxpl_mpio(dxpl_id, H5FD_MPIO_COLLECTIVE) < 0)
+                goto out;
+        }
     }
 #endif
 
@@ -5938,12 +5970,18 @@ write_dset(hid_t loc_id, int rank, hsize_t *dims, const char *dset_name, hid_t t
         goto out;
     if (buf) {
 #ifdef H5_HAVE_PARALLEL
-        /* Set up collective writes for parallel driver */
-        if (h5_using_parallel_driver(NULL)) {
-            if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0)
-                goto out;
-            if (H5Pset_dxpl_mpio(dxpl_id, H5FD_MPIO_COLLECTIVE) < 0)
+        {
+            hbool_t driver_is_parallel;
+
+            if (h5_using_parallel_driver(H5P_DEFAULT, &driver_is_parallel) < 0)
                 goto out;
+            /* Set up collective writes for parallel driver */
+            if (driver_is_parallel) {
+                if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0)
+                    goto out;
+                if (H5Pset_dxpl_mpio(dxpl_id, H5FD_MPIO_COLLECTIVE) < 0)
+                    goto out;
+            }
         }
 #endif
 
diff --git a/tools/test/h5stat/CMakeLists.txt b/tools/test/h5stat/CMakeLists.txt
index a40d196..0242f94 100644
--- a/tools/test/h5stat/CMakeLists.txt
+++ b/tools/test/h5stat/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_TEST_H5STAT C)
 # --------------------------------------------------------------------
 if (HDF5_BUILD_GENERATORS AND NOT ONLY_SHARED_LIBS)
   add_executable (h5stat_gentest ${HDF5_TOOLS_TEST_H5STAT_SOURCE_DIR}/h5stat_gentest.c)
-  target_include_directories (h5stat_gentest PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5stat_gentest PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   TARGET_C_PROPERTIES (h5stat_gentest STATIC)
   target_link_libraries (h5stat_gentest PRIVATE ${HDF5_LIB_TARGET})
   set_target_properties (h5stat_gentest PROPERTIES FOLDER generator/tools)
diff --git a/tools/test/misc/CMakeLists.txt b/tools/test/misc/CMakeLists.txt
index f67f36b..c3dc303 100644
--- a/tools/test/misc/CMakeLists.txt
+++ b/tools/test/misc/CMakeLists.txt
@@ -6,7 +6,7 @@ project (HDF5_TOOLS_TEST_MISC C)
 # --------------------------------------------------------------------
 if (HDF5_BUILD_GENERATORS AND NOT ONLY_SHARED_LIBS)
   add_executable (h5repart_gentest ${HDF5_TOOLS_TEST_MISC_SOURCE_DIR}/h5repart_gentest.c)
-  target_include_directories (h5repart_gentest PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5repart_gentest PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   if (NOT ONLY_SHARED_LIBS)
     TARGET_C_PROPERTIES (h5repart_gentest STATIC)
     target_link_libraries (h5repart_gentest PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET})
@@ -25,7 +25,7 @@ if (HDF5_BUILD_GENERATORS AND NOT ONLY_SHARED_LIBS)
   endif ()
 
   add_executable (h5clear_gentest ${HDF5_TOOLS_TEST_MISC_SOURCE_DIR}/h5clear_gentest.c)
-  target_include_directories (h5clear_gentest PRIVATE "${HDF5_SRC_DIR};${HDF5_TEST_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (h5clear_gentest PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_TEST_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   if (NOT ONLY_SHARED_LIBS)
     TARGET_C_PROPERTIES (h5clear_gentest STATIC)
     target_link_libraries (h5clear_gentest PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET})
@@ -48,7 +48,7 @@ if (HDF5_BUILD_GENERATORS AND NOT ONLY_SHARED_LIBS)
 endif ()
 
 add_executable (h5repart_test ${HDF5_TOOLS_TEST_MISC_SOURCE_DIR}/repart_test.c)
-target_include_directories (h5repart_test PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (h5repart_test PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT ONLY_SHARED_LIBS)
   TARGET_C_PROPERTIES (h5repart_test STATIC)
   target_link_libraries (h5repart_test PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -66,7 +66,7 @@ if (HDF5_ENABLE_FORMATTERS)
 endif ()
 
 add_executable (clear_open_chk ${HDF5_TOOLS_TEST_MISC_SOURCE_DIR}/clear_open_chk.c)
-target_include_directories (clear_open_chk PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (clear_open_chk PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT ONLY_SHARED_LIBS)
   TARGET_C_PROPERTIES (clear_open_chk STATIC)
   target_link_libraries (clear_open_chk PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
diff --git a/tools/test/misc/vds/CMakeLists.txt b/tools/test/misc/vds/CMakeLists.txt
index e8eb960..e1b3014 100644
--- a/tools/test/misc/vds/CMakeLists.txt
+++ b/tools/test/misc/vds/CMakeLists.txt
@@ -3,7 +3,7 @@ project (HDF5_TOOLS_TEST_MISC_VDS C)
 
 macro (ADD_H5_GENERATOR genfile)
   add_executable (${genfile} ${HDF5_TOOLS_TEST_MISC_VDS_SOURCE_DIR}/${genfile}.c)
-  target_include_directories (${genfile} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+  target_include_directories (${genfile} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
   if (NOT ONLY_SHARED_LIBS)
     TARGET_C_PROPERTIES (${genfile} STATIC)
     target_link_libraries (${genfile} PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
diff --git a/tools/test/perform/CMakeLists.txt b/tools/test/perform/CMakeLists.txt
index 15d1467..adc9a04 100644
--- a/tools/test/perform/CMakeLists.txt
+++ b/tools/test/perform/CMakeLists.txt
@@ -8,7 +8,7 @@ set (chunk_SOURCES
     ${HDF5_TOOLS_TEST_PERFORM_SOURCE_DIR}/chunk.c
 )
 add_executable(chunk ${chunk_SOURCES})
-target_include_directories (chunk PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (chunk PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (chunk STATIC)
   target_link_libraries (chunk PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -29,7 +29,7 @@ set (iopipe_SOURCES
     ${HDF5_TOOLS_TEST_PERFORM_SOURCE_DIR}/iopipe.c
 )
 add_executable (iopipe ${iopipe_SOURCES})
-target_include_directories (iopipe PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (iopipe PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (iopipe STATIC)
   target_link_libraries (iopipe PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -50,7 +50,7 @@ set (chunk_cache_SOURCES
     ${HDF5_TOOLS_TEST_PERFORM_SOURCE_DIR}/chunk_cache.c
 )
 add_executable (chunk_cache ${chunk_cache_SOURCES})
-target_include_directories (chunk_cache PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (chunk_cache PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (chunk_cache STATIC)
   target_link_libraries (chunk_cache PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -71,7 +71,7 @@ set (overhead_SOURCES
     ${HDF5_TOOLS_TEST_PERFORM_SOURCE_DIR}/overhead.c
 )
 add_executable (overhead ${overhead_SOURCES})
-target_include_directories (overhead PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (overhead PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (overhead STATIC)
   target_link_libraries (overhead PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -92,7 +92,7 @@ set (perf_meta_SOURCES
     ${HDF5_TOOLS_TEST_PERFORM_SOURCE_DIR}/perf_meta.c
 )
 add_executable (perf_meta ${perf_meta_SOURCES})
-target_include_directories (perf_meta PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (perf_meta PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (perf_meta STATIC)
   target_link_libraries (perf_meta PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET} ${HDF5_LIB_TARGET})
@@ -113,7 +113,7 @@ set (zip_perf_SOURCES
     ${HDF5_TOOLS_TEST_PERFORM_SOURCE_DIR}/zip_perf.c
 )
 add_executable (zip_perf ${zip_perf_SOURCES})
-target_include_directories (zip_perf PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
+target_include_directories (zip_perf PRIVATE "${HDF5_TEST_SRC_DIR};${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>")
 if (NOT BUILD_SHARED_LIBS)
   TARGET_C_PROPERTIES (zip_perf STATIC)
   target_link_libraries (zip_perf PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET} ${LINK_COMP_LIBS})
author	jhendersonHDF <jhenderson@hdfgroup.org>	2022-07-22 20:03:12 (GMT)
committer	GitHub <noreply@github.com>	2022-07-22 20:03:12 (GMT)
commit	27bb358f7ab1d23f3f8ce081c6b4f1602033e4d7 (patch)
tree	e8a69bdfbc16f9acf073ddb3ebff586eccfca009 /tools
parent	32caa567a26680c5f98d0ea0cc989c45c89dc654 (diff)
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