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authorAllen Byrne <byrn@hdfgroup.org>2013-02-18 20:56:21 (GMT)
committerAllen Byrne <byrn@hdfgroup.org>2013-02-18 20:56:21 (GMT)
commitaff5c20a6ae123dd4250ee46e1cdadbae00fd823 (patch)
tree9bc8c1e2c2cdf4227053fa6beedfe14fb4a9a1a2 /tools
parentdbad502865d8817fe0db94dd6d6b9656ee257790 (diff)
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[svn-r23305] HDFFV-8257: szip still used even if headers are not found. Change configure to test the result of the CHECK HEADERS call before checking for the library.
Tested: local linux, h5committest
Diffstat (limited to 'tools')
-rw-r--r--tools/Makefile.in2
-rw-r--r--tools/h5copy/Makefile.in2
-rw-r--r--tools/h5diff/Makefile.in2
-rw-r--r--tools/h5dump/Makefile.in2
-rw-r--r--tools/h5import/Makefile.in2
-rw-r--r--tools/h5jam/Makefile.in2
-rw-r--r--tools/h5ls/Makefile.in2
-rw-r--r--tools/h5repack/Makefile.in2
-rw-r--r--tools/h5stat/Makefile.in2
-rw-r--r--tools/lib/Makefile.in2
-rw-r--r--tools/lib/h5tools_dump.c2
-rw-r--r--tools/lib/h5tools_str.c379
-rw-r--r--tools/misc/Makefile.in2
13 files changed, 198 insertions, 205 deletions
diff --git a/tools/Makefile.in b/tools/Makefile.in
index 70e11ae..46c7d53 100644
--- a/tools/Makefile.in
+++ b/tools/Makefile.in
@@ -228,6 +228,7 @@ H5_VERSION = @H5_VERSION@
HADDR_T = @HADDR_T@
HAVE_DMALLOC = @HAVE_DMALLOC@
HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
HDF5_HL = @HDF5_HL@
HDF5_INTERFACES = @HDF5_INTERFACES@
HDF_CXX = @HDF_CXX@
@@ -279,7 +280,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
PARALLEL = @PARALLEL@
PATH_SEPARATOR = @PATH_SEPARATOR@
PERL = @PERL@
-PTHREAD = @PTHREAD@
RANLIB = @RANLIB@
ROOT = @ROOT@
RUNPARALLEL = @RUNPARALLEL@
diff --git a/tools/h5copy/Makefile.in b/tools/h5copy/Makefile.in
index da9d0b7..3278f80 100644
--- a/tools/h5copy/Makefile.in
+++ b/tools/h5copy/Makefile.in
@@ -234,6 +234,7 @@ H5_VERSION = @H5_VERSION@
HADDR_T = @HADDR_T@
HAVE_DMALLOC = @HAVE_DMALLOC@
HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
HDF5_HL = @HDF5_HL@
HDF5_INTERFACES = @HDF5_INTERFACES@
HDF_CXX = @HDF_CXX@
@@ -285,7 +286,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
PARALLEL = @PARALLEL@
PATH_SEPARATOR = @PATH_SEPARATOR@
PERL = @PERL@
-PTHREAD = @PTHREAD@
RANLIB = @RANLIB@
ROOT = @ROOT@
RUNPARALLEL = @RUNPARALLEL@
diff --git a/tools/h5diff/Makefile.in b/tools/h5diff/Makefile.in
index 4676341..5567ceb 100644
--- a/tools/h5diff/Makefile.in
+++ b/tools/h5diff/Makefile.in
@@ -241,6 +241,7 @@ H5_VERSION = @H5_VERSION@
HADDR_T = @HADDR_T@
HAVE_DMALLOC = @HAVE_DMALLOC@
HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
HDF5_HL = @HDF5_HL@
HDF5_INTERFACES = @HDF5_INTERFACES@
HDF_CXX = @HDF_CXX@
@@ -292,7 +293,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
PARALLEL = @PARALLEL@
PATH_SEPARATOR = @PATH_SEPARATOR@
PERL = @PERL@
-PTHREAD = @PTHREAD@
RANLIB = @RANLIB@
ROOT = @ROOT@
RUNPARALLEL = @RUNPARALLEL@
diff --git a/tools/h5dump/Makefile.in b/tools/h5dump/Makefile.in
index 6b4a6e6..4741683 100644
--- a/tools/h5dump/Makefile.in
+++ b/tools/h5dump/Makefile.in
@@ -240,6 +240,7 @@ H5_VERSION = @H5_VERSION@
HADDR_T = @HADDR_T@
HAVE_DMALLOC = @HAVE_DMALLOC@
HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
HDF5_HL = @HDF5_HL@
HDF5_INTERFACES = @HDF5_INTERFACES@
HDF_CXX = @HDF_CXX@
@@ -291,7 +292,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
PARALLEL = @PARALLEL@
PATH_SEPARATOR = @PATH_SEPARATOR@
PERL = @PERL@
-PTHREAD = @PTHREAD@
RANLIB = @RANLIB@
ROOT = @ROOT@
RUNPARALLEL = @RUNPARALLEL@
diff --git a/tools/h5import/Makefile.in b/tools/h5import/Makefile.in
index 16e8901..9ad2341 100644
--- a/tools/h5import/Makefile.in
+++ b/tools/h5import/Makefile.in
@@ -234,6 +234,7 @@ H5_VERSION = @H5_VERSION@
HADDR_T = @HADDR_T@
HAVE_DMALLOC = @HAVE_DMALLOC@
HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
HDF5_HL = @HDF5_HL@
HDF5_INTERFACES = @HDF5_INTERFACES@
HDF_CXX = @HDF_CXX@
@@ -285,7 +286,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
PARALLEL = @PARALLEL@
PATH_SEPARATOR = @PATH_SEPARATOR@
PERL = @PERL@
-PTHREAD = @PTHREAD@
RANLIB = @RANLIB@
ROOT = @ROOT@
RUNPARALLEL = @RUNPARALLEL@
diff --git a/tools/h5jam/Makefile.in b/tools/h5jam/Makefile.in
index ff8b089..fd170fd 100644
--- a/tools/h5jam/Makefile.in
+++ b/tools/h5jam/Makefile.in
@@ -248,6 +248,7 @@ H5_VERSION = @H5_VERSION@
HADDR_T = @HADDR_T@
HAVE_DMALLOC = @HAVE_DMALLOC@
HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
HDF5_HL = @HDF5_HL@
HDF5_INTERFACES = @HDF5_INTERFACES@
HDF_CXX = @HDF_CXX@
@@ -299,7 +300,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
PARALLEL = @PARALLEL@
PATH_SEPARATOR = @PATH_SEPARATOR@
PERL = @PERL@
-PTHREAD = @PTHREAD@
RANLIB = @RANLIB@
ROOT = @ROOT@
RUNPARALLEL = @RUNPARALLEL@
diff --git a/tools/h5ls/Makefile.in b/tools/h5ls/Makefile.in
index 7aa4329..1861b03 100644
--- a/tools/h5ls/Makefile.in
+++ b/tools/h5ls/Makefile.in
@@ -228,6 +228,7 @@ H5_VERSION = @H5_VERSION@
HADDR_T = @HADDR_T@
HAVE_DMALLOC = @HAVE_DMALLOC@
HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
HDF5_HL = @HDF5_HL@
HDF5_INTERFACES = @HDF5_INTERFACES@
HDF_CXX = @HDF_CXX@
@@ -279,7 +280,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
PARALLEL = @PARALLEL@
PATH_SEPARATOR = @PATH_SEPARATOR@
PERL = @PERL@
-PTHREAD = @PTHREAD@
RANLIB = @RANLIB@
ROOT = @ROOT@
RUNPARALLEL = @RUNPARALLEL@
diff --git a/tools/h5repack/Makefile.in b/tools/h5repack/Makefile.in
index 389339f..fe3a11c 100644
--- a/tools/h5repack/Makefile.in
+++ b/tools/h5repack/Makefile.in
@@ -248,6 +248,7 @@ H5_VERSION = @H5_VERSION@
HADDR_T = @HADDR_T@
HAVE_DMALLOC = @HAVE_DMALLOC@
HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
HDF5_HL = @HDF5_HL@
HDF5_INTERFACES = @HDF5_INTERFACES@
HDF_CXX = @HDF_CXX@
@@ -299,7 +300,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
PARALLEL = @PARALLEL@
PATH_SEPARATOR = @PATH_SEPARATOR@
PERL = @PERL@
-PTHREAD = @PTHREAD@
RANLIB = @RANLIB@
ROOT = @ROOT@
RUNPARALLEL = @RUNPARALLEL@
diff --git a/tools/h5stat/Makefile.in b/tools/h5stat/Makefile.in
index 389e460..ec77732 100644
--- a/tools/h5stat/Makefile.in
+++ b/tools/h5stat/Makefile.in
@@ -263,6 +263,7 @@ H5_VERSION = @H5_VERSION@
HADDR_T = @HADDR_T@
HAVE_DMALLOC = @HAVE_DMALLOC@
HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
HDF5_HL = @HDF5_HL@
HDF5_INTERFACES = @HDF5_INTERFACES@
HDF_CXX = @HDF_CXX@
@@ -314,7 +315,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
PARALLEL = @PARALLEL@
PATH_SEPARATOR = @PATH_SEPARATOR@
PERL = @PERL@
-PTHREAD = @PTHREAD@
RANLIB = @RANLIB@
ROOT = @ROOT@
RUNPARALLEL = @RUNPARALLEL@
diff --git a/tools/lib/Makefile.in b/tools/lib/Makefile.in
index 6a76e1d..743e158 100644
--- a/tools/lib/Makefile.in
+++ b/tools/lib/Makefile.in
@@ -226,6 +226,7 @@ H5_VERSION = @H5_VERSION@
HADDR_T = @HADDR_T@
HAVE_DMALLOC = @HAVE_DMALLOC@
HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
HDF5_HL = @HDF5_HL@
HDF5_INTERFACES = @HDF5_INTERFACES@
HDF_CXX = @HDF_CXX@
@@ -277,7 +278,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
PARALLEL = @PARALLEL@
PATH_SEPARATOR = @PATH_SEPARATOR@
PERL = @PERL@
-PTHREAD = @PTHREAD@
RANLIB = @RANLIB@
ROOT = @ROOT@
RUNPARALLEL = @RUNPARALLEL@
diff --git a/tools/lib/h5tools_dump.c b/tools/lib/h5tools_dump.c
index f83c664..dbb5f98 100644
--- a/tools/lib/h5tools_dump.c
+++ b/tools/lib/h5tools_dump.c
@@ -302,7 +302,7 @@ h5tools_dump_simple_data(FILE *stream, const h5tool_format_t *info, hid_t contai
*/
curr_pos = ctx->sm_pos;
- if (region_output && H5Tequal(type, H5T_STD_REF_DSETREG)) {
+ if (region_output && (size == H5R_DSET_REG_REF_BUF_SIZE)) {
for (i = 0; i < nelmts; i++, ctx->cur_elmt++, elmt_counter++) {
void* memref = mem + i * size;
char ref_name[1024];
diff --git a/tools/lib/h5tools_str.c b/tools/lib/h5tools_str.c
index 1646351..e17ae89 100644
--- a/tools/lib/h5tools_str.c
+++ b/tools/lib/h5tools_str.c
@@ -685,7 +685,8 @@ char *
h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t container,
hid_t type, void *vp, h5tools_context_t *ctx)
{
- size_t n, offset, size=0, nelmts, start;
+ size_t nsize, offset, size=0, nelmts, start;
+ H5T_sign_t nsign;
char *name;
unsigned char *ucp_vp = (unsigned char *)vp;
char *cp_vp = (char *)vp;
@@ -715,15 +716,16 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai
/* Append value depending on data type */
start = h5tools_str_len(str);
+ nsize = H5Tget_size(type);
+ nsign = H5Tget_sign(type);
if (info->raw) {
size_t i;
- n = H5Tget_size(type);
- if (1 == n) {
+ if (1 == nsize) {
h5tools_str_append(str, OPT(info->fmt_raw, "0x%02x"), ucp_vp[0]);
}
else {
- for (i = 0; i < n; i++) {
+ for (i = 0; i < nsize; i++) {
if (i)
h5tools_str_append(str, ":");
h5tools_str_append(str, OPT(info->fmt_raw, "%02x"), ucp_vp[i]);
@@ -735,20 +737,23 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai
return NULL;
switch (type_class) {
case H5T_FLOAT:
- if (H5Tequal(type, H5T_NATIVE_FLOAT)) {
+ if (sizeof(float) == nsize) {
+ /* if (H5Tequal(type, H5T_NATIVE_FLOAT)) */
float tempfloat;
HDmemcpy(&tempfloat, vp, sizeof(float));
h5tools_str_append(str, OPT(info->fmt_float, "%g"), tempfloat);
}
- else if (H5Tequal(type, H5T_NATIVE_DOUBLE)) {
+ else if (sizeof(double) == nsize) {
+ /* if (H5Tequal(type, H5T_NATIVE_DOUBLE)) */
double tempdouble;
HDmemcpy(&tempdouble, vp, sizeof(double));
h5tools_str_append(str, OPT(info->fmt_double, "%g"), tempdouble);
#if H5_SIZEOF_LONG_DOUBLE !=0
}
- else if (H5Tequal(type, H5T_NATIVE_LDOUBLE)) {
+ else if (sizeof(long double) == nsize) {
+ /* if (H5Tequal(type, H5T_NATIVE_LDOUBLE)) */
long double templdouble;
HDmemcpy(&templdouble, vp, sizeof(long double));
@@ -833,147 +838,140 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai
}
break;
case H5T_INTEGER:
- if (H5Tequal(type, H5T_NATIVE_INT)) {
- HDmemcpy(&tempint, vp, sizeof(int));
- if (packed_bits_num) {
- if (packed_data_offset >= 8 * sizeof(int))
- tempint = 0;
- else
- tempint = (tempint >> packed_data_offset) & packed_data_mask;
- }
- h5tools_str_append(str, OPT(info->fmt_int, "%d"), tempint);
- }
- else if (H5Tequal(type, H5T_NATIVE_UINT)) {
- HDmemcpy(&tempuint, vp, sizeof(unsigned int));
- if (packed_bits_num) {
- if (packed_data_offset >= 8 * sizeof(unsigned int))
- tempuint = 0;
- else
- tempuint = (tempuint >> packed_data_offset) & packed_data_mask;
- }
- h5tools_str_append(str, OPT(info->fmt_uint, "%u"), tempuint);
- }
- else if (info->ascii && (H5Tequal(type, H5T_NATIVE_SCHAR) || H5Tequal(type, H5T_NATIVE_UCHAR))) {
- h5tools_print_char(str, info, (char) (*ucp_vp));
- }
- else if (H5Tequal(type, H5T_NATIVE_SCHAR)) {
- signed char tempchar;
- HDmemcpy(&tempchar, cp_vp, sizeof(char));
- if (packed_bits_num) {
- if (packed_data_offset >= 8 * sizeof(char))
- tempchar = 0;
- else
- tempchar = (tempchar >> packed_data_offset) & packed_data_mask;
- }
-#ifdef H5_VMS
- h5tools_str_append(str, OPT(info->fmt_schar, "%hd"), tempchar);
-#else
- h5tools_str_append(str, OPT(info->fmt_schar, "%hhd"), tempchar);
-#endif
- }
- else if (H5Tequal(type, H5T_NATIVE_UCHAR)) {
- unsigned char tempuchar;
- HDmemcpy(&tempuchar, ucp_vp, sizeof(unsigned char));
- if (packed_bits_num) {
- if (packed_data_offset >= 8 * sizeof(unsigned char))
- tempuchar = 0;
- else
- tempuchar = (tempuchar >> packed_data_offset) & packed_data_mask;
- }
- h5tools_str_append(str, OPT(info->fmt_uchar, "%u"), tempuchar);
- }
- else if (H5Tequal(type, H5T_NATIVE_SHORT)) {
- short tempshort;
-
- HDmemcpy(&tempshort, vp, sizeof(short));
- if (packed_bits_num) {
- if (packed_data_offset >= 8 * sizeof(short))
- tempshort = 0;
- else
- tempshort = (tempshort >> packed_data_offset) & packed_data_mask;
- }
- h5tools_str_append(str, OPT(info->fmt_short, "%d"), tempshort);
- }
- else if (H5Tequal(type, H5T_NATIVE_USHORT)) {
- unsigned short tempushort;
-
- HDmemcpy(&tempushort, vp, sizeof(unsigned short));
- if (packed_bits_num) {
- if (packed_data_offset >= 8 * sizeof(unsigned short))
- tempushort = 0;
- else
- tempushort = (tempushort >> packed_data_offset) & packed_data_mask;
- }
- h5tools_str_append(str, OPT(info->fmt_ushort, "%u"), tempushort);
- }
- else if (H5Tequal(type, H5T_NATIVE_LONG)) {
- HDmemcpy(&templong, vp, sizeof(long));
- if (packed_bits_num) {
- if (packed_data_offset >= 8 * sizeof(long))
- templong = 0;
- else
- templong = (templong >> packed_data_offset) & packed_data_mask;
+ if (sizeof(char) == nsize) {
+ /* if ((H5Tequal(type, H5T_NATIVE_SCHAR) || H5Tequal(type, H5T_NATIVE_UCHAR))) */
+ if (info->ascii) {
+ h5tools_print_char(str, info, (char) (*ucp_vp));
}
- h5tools_str_append(str, OPT(info->fmt_long, "%ld"), templong);
- }
- else if (H5Tequal(type, H5T_NATIVE_ULONG)) {
- HDmemcpy(&tempulong, vp, sizeof(unsigned long));
- if (packed_bits_num) {
- if (packed_data_offset >= 8 * sizeof(unsigned long))
- tempulong = 0;
- else
- tempulong = (tempulong >> packed_data_offset) & packed_data_mask;
+ else if(H5T_SGN_NONE == nsign) {
+ /* if (H5Tequal(type, H5T_NATIVE_UCHAR)) */
+ unsigned char tempuchar;
+ HDmemcpy(&tempuchar, ucp_vp, sizeof(unsigned char));
+ if (packed_bits_num) {
+ if (packed_data_offset >= 8 * sizeof(unsigned char))
+ tempuchar = 0;
+ else
+ tempuchar = (tempuchar >> packed_data_offset) & packed_data_mask;
+ }
+ h5tools_str_append(str, OPT(info->fmt_uchar, "%u"), tempuchar);
}
- h5tools_str_append(str, OPT(info->fmt_ulong, "%lu"), tempulong);
- }
- else if (H5Tequal(type, H5T_NATIVE_LLONG)) {
- HDmemcpy(&templlong, vp, sizeof(long long));
- if (packed_bits_num) {
- if (packed_data_offset >= 8 * sizeof(long long))
- templlong = 0;
- else
- templlong = (templlong >> packed_data_offset) & packed_data_mask;
+ else {
+ /* if (H5Tequal(type, H5T_NATIVE_SCHAR)) */
+ signed char tempchar;
+ HDmemcpy(&tempchar, cp_vp, sizeof(char));
+ if (packed_bits_num) {
+ if (packed_data_offset >= 8 * sizeof(char))
+ tempchar = 0;
+ else
+ tempchar = (tempchar >> packed_data_offset) & packed_data_mask;
+ }
+ #ifdef H5_VMS
+ h5tools_str_append(str, OPT(info->fmt_schar, "%hd"), tempchar);
+ #else
+ h5tools_str_append(str, OPT(info->fmt_schar, "%hhd"), tempchar);
+ #endif
}
- h5tools_str_append(str, OPT(info->fmt_llong, fmt_llong), templlong);
- }
- else if (H5Tequal(type, H5T_NATIVE_ULLONG)) {
- HDmemcpy(&tempullong, vp, sizeof(unsigned long long));
- if (packed_bits_num) {
- if (packed_data_offset >= 8 * sizeof(unsigned long long))
- tempullong = 0;
- else
- tempullong = (tempullong >> packed_data_offset) & packed_data_mask;
+ } /* end if (sizeof(char) == nsize) */
+ else if (sizeof(int) == nsize) {
+ if(H5T_SGN_NONE == nsign) {
+ /* if (H5Tequal(type, H5T_NATIVE_UINT)) */
+ HDmemcpy(&tempuint, vp, sizeof(unsigned int));
+ if (packed_bits_num) {
+ if (packed_data_offset >= 8 * sizeof(unsigned int))
+ tempuint = 0;
+ else
+ tempuint = (tempuint >> packed_data_offset) & packed_data_mask;
+ }
+ h5tools_str_append(str, OPT(info->fmt_uint, "%u"), tempuint);
}
- h5tools_str_append(str, OPT(info->fmt_ullong, fmt_ullong), tempullong);
- }
- else if (H5Tequal(type, H5T_NATIVE_HSSIZE)) {
- if (sizeof(hssize_t) == sizeof(int)) {
+ else {
+ /* if (H5Tequal(type, H5T_NATIVE_INT)) */
HDmemcpy(&tempint, vp, sizeof(int));
+ if (packed_bits_num) {
+ if (packed_data_offset >= 8 * sizeof(int))
+ tempint = 0;
+ else
+ tempint = (tempint >> packed_data_offset) & packed_data_mask;
+ }
h5tools_str_append(str, OPT(info->fmt_int, "%d"), tempint);
}
- else if (sizeof(hssize_t) == sizeof(long)) {
- HDmemcpy(&templong, vp, sizeof(long));
- h5tools_str_append(str, OPT(info->fmt_long, "%ld"), templong);
+ } /* end if (sizeof(int) == nsize) */
+ else if (sizeof(short) == nsize) {
+ if(H5T_SGN_NONE == nsign) {
+ /* if (H5Tequal(type, H5T_NATIVE_USHORT)) */
+ unsigned short tempushort;
+
+ HDmemcpy(&tempushort, vp, sizeof(unsigned short));
+ if (packed_bits_num) {
+ if (packed_data_offset >= 8 * sizeof(unsigned short))
+ tempushort = 0;
+ else
+ tempushort = (tempushort >> packed_data_offset) & packed_data_mask;
+ }
+ h5tools_str_append(str, OPT(info->fmt_ushort, "%u"), tempushort);
}
else {
- HDmemcpy(&templlong, vp, sizeof(long long));
- h5tools_str_append(str, OPT(info->fmt_llong, fmt_llong), templlong);
- }
- }
- else if (H5Tequal(type, H5T_NATIVE_HSIZE)) {
- if (sizeof(hsize_t) == sizeof(int)) {
- HDmemcpy(&tempuint, vp, sizeof(unsigned int));
- h5tools_str_append(str, OPT(info->fmt_uint, "%u"), tempuint);
+ /* if (H5Tequal(type, H5T_NATIVE_SHORT)) */
+ short tempshort;
+
+ HDmemcpy(&tempshort, vp, sizeof(short));
+ if (packed_bits_num) {
+ if (packed_data_offset >= 8 * sizeof(short))
+ tempshort = 0;
+ else
+ tempshort = (tempshort >> packed_data_offset) & packed_data_mask;
+ }
+ h5tools_str_append(str, OPT(info->fmt_short, "%d"), tempshort);
}
- else if (sizeof(hsize_t) == sizeof(long)) {
- HDmemcpy(&tempulong, vp, sizeof(long));
+ } /* end if (sizeof(short) == nsize) */
+ else if (sizeof(long) == nsize) {
+ if(H5T_SGN_NONE == nsign) {
+ /* if (H5Tequal(type, H5T_NATIVE_ULONG)) */
+ HDmemcpy(&tempulong, vp, sizeof(unsigned long));
+ if (packed_bits_num) {
+ if (packed_data_offset >= 8 * sizeof(unsigned long))
+ tempulong = 0;
+ else
+ tempulong = (tempulong >> packed_data_offset) & packed_data_mask;
+ }
h5tools_str_append(str, OPT(info->fmt_ulong, "%lu"), tempulong);
}
else {
+ /* if (H5Tequal(type, H5T_NATIVE_LONG)) */
+ HDmemcpy(&templong, vp, sizeof(long));
+ if (packed_bits_num) {
+ if (packed_data_offset >= 8 * sizeof(long))
+ templong = 0;
+ else
+ templong = (templong >> packed_data_offset) & packed_data_mask;
+ }
+ h5tools_str_append(str, OPT(info->fmt_long, "%ld"), templong);
+ }
+ } /* end if (sizeof(long) == nsize) */
+ else if (sizeof(long long) == nsize) {
+ if(H5T_SGN_NONE == nsign) {
+ /* if (H5Tequal(type, H5T_NATIVE_ULLONG)) */
HDmemcpy(&tempullong, vp, sizeof(unsigned long long));
+ if (packed_bits_num) {
+ if (packed_data_offset >= 8 * sizeof(unsigned long long))
+ tempullong = 0;
+ else
+ tempullong = (tempullong >> packed_data_offset) & packed_data_mask;
+ }
h5tools_str_append(str, OPT(info->fmt_ullong, fmt_ullong), tempullong);
}
- }
+ else {
+ /* if (H5Tequal(type, H5T_NATIVE_LLONG)) */
+ HDmemcpy(&templlong, vp, sizeof(long long));
+ if (packed_bits_num) {
+ if (packed_data_offset >= 8 * sizeof(long long))
+ templlong = 0;
+ else
+ templlong = (templlong >> packed_data_offset) & packed_data_mask;
+ }
+ h5tools_str_append(str, OPT(info->fmt_llong, fmt_llong), templlong);
+ }
+ } /* end if (sizeof(long long) == nsize) */
break;
case H5T_COMPOUND:
{
@@ -1024,75 +1022,71 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai
}
else {
size_t i;
- n = H5Tget_size(type);
- if (1 == n) {
+ if (1 == nsize) {
h5tools_str_append(str, "0x%02x", ucp_vp[0]);
}
else {
- for (i = 0; i < n; i++)
+ for (i = 0; i < nsize; i++)
h5tools_str_append(str, "%s%02x", i ? ":" : "", ucp_vp[i]);
}
}
}
break;
case H5T_REFERENCE:
- if (H5Tequal(type, H5T_STD_REF_DSETREG)) {
- if (h5tools_str_is_zero(vp, H5Tget_size(type))) {
- h5tools_str_append(str, "NULL");
- }
- else {
- h5tools_str_sprint_region(str, info, container, vp);
- }
+ if (h5tools_str_is_zero(vp, nsize)) {
+ h5tools_str_append(str, "NULL");
}
- else if (H5Tequal(type, H5T_STD_REF_OBJ)) {
- /*
- * Object references -- show the type and OID of the referenced
- * object.
- */
- if (h5tools_str_is_zero(vp, H5Tget_size(type))) {
- h5tools_str_append(str, "NULL");
+ else {
+ if (nsize == H5R_DSET_REG_REF_BUF_SIZE) {
+ /* if (H5Tequal(type, H5T_STD_REF_DSETREG)) */
+ h5tools_str_sprint_region(str, info, container, vp);
}
- else {
- H5O_info_t oi;
- const char *path;
-
- obj = H5Rdereference2(container, H5P_DEFAULT, H5R_OBJECT, vp);
- H5Oget_info(obj, &oi);
-
- /* Print object type and close object */
- switch (oi.type) {
- case H5O_TYPE_GROUP:
- h5tools_str_append(str, H5_TOOLS_GROUP);
- break;
-
- case H5O_TYPE_DATASET:
- h5tools_str_append(str, H5_TOOLS_DATASET);
- break;
-
- case H5O_TYPE_NAMED_DATATYPE:
- h5tools_str_append(str, H5_TOOLS_DATATYPE);
- break;
-
- default:
- h5tools_str_append(str, "%u-", (unsigned) oi.type);
- break;
- } /* end switch */
- H5Oclose(obj);
-
- /* Print OID */
- if (info->obj_hidefileno)
- h5tools_str_append(str, info->obj_format, oi.addr);
- else
- h5tools_str_append(str, info->obj_format, oi.fileno, oi.addr);
-
- /* Print name */
- path = lookup_ref_path(*(haddr_t *) vp);
- if (path) {
- h5tools_str_append(str, " ");
- h5tools_str_append(str, path);
- h5tools_str_append(str, " ");
- } /* end if */
- } /* end else */
+ else if (nsize == H5R_OBJ_REF_BUF_SIZE) {
+ /* if (H5Tequal(type, H5T_STD_REF_OBJ)) */
+ /*
+ * Object references -- show the type and OID of the referenced
+ * object.
+ */
+ H5O_info_t oi;
+ const char *path;
+
+ obj = H5Rdereference2(container, H5P_DEFAULT, H5R_OBJECT, vp);
+ H5Oget_info(obj, &oi);
+
+ /* Print object type and close object */
+ switch (oi.type) {
+ case H5O_TYPE_GROUP:
+ h5tools_str_append(str, H5_TOOLS_GROUP);
+ break;
+
+ case H5O_TYPE_DATASET:
+ h5tools_str_append(str, H5_TOOLS_DATASET);
+ break;
+
+ case H5O_TYPE_NAMED_DATATYPE:
+ h5tools_str_append(str, H5_TOOLS_DATATYPE);
+ break;
+
+ default:
+ h5tools_str_append(str, "%u-", (unsigned) oi.type);
+ break;
+ } /* end switch */
+ H5Oclose(obj);
+
+ /* Print OID */
+ if (info->obj_hidefileno)
+ h5tools_str_append(str, info->obj_format, oi.addr);
+ else
+ h5tools_str_append(str, info->obj_format, oi.fileno, oi.addr);
+
+ /* Print name */
+ path = lookup_ref_path(*(haddr_t *) vp);
+ if (path) {
+ h5tools_str_append(str, " ");
+ h5tools_str_append(str, path);
+ h5tools_str_append(str, " ");
+ } /* end if */
+ } /* end else if (H5Tequal(type, H5T_STD_REF_OBJ)) */
}
break;
case H5T_ARRAY:
@@ -1206,12 +1200,11 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai
{
/* All other types get printed as hexadecimal */
size_t i;
- n = H5Tget_size(type);
- if (1 == n) {
+ if (1 == nsize) {
h5tools_str_append(str, "0x%02x", ucp_vp[0]);
}
else {
- for (i = 0; i < n; i++)
+ for (i = 0; i < nsize; i++)
h5tools_str_append(str, "%s%02x", i ? ":" : "", ucp_vp[i]);
}
}
diff --git a/tools/misc/Makefile.in b/tools/misc/Makefile.in
index 8c2e1c1..3320276 100644
--- a/tools/misc/Makefile.in
+++ b/tools/misc/Makefile.in
@@ -288,6 +288,7 @@ H5_VERSION = @H5_VERSION@
HADDR_T = @HADDR_T@
HAVE_DMALLOC = @HAVE_DMALLOC@
HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
HDF5_HL = @HDF5_HL@
HDF5_INTERFACES = @HDF5_INTERFACES@
HDF_CXX = @HDF_CXX@
@@ -339,7 +340,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
PARALLEL = @PARALLEL@
PATH_SEPARATOR = @PATH_SEPARATOR@
PERL = @PERL@
-PTHREAD = @PTHREAD@
RANLIB = @RANLIB@
ROOT = @ROOT@
RUNPARALLEL = @RUNPARALLEL@