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| author | Neil Fortner <nfortne2@hdfgroup.org> | 2015-04-10 23:00:48 (GMT) |
|---|---|---|
| committer | Neil Fortner <nfortne2@hdfgroup.org> | 2015-04-10 23:00:48 (GMT) |
| commit | 6a27582a4488d4d18a0b6cd584b8950ab02b81a7 (patch) | |
| tree | 01615f7679a3d3ef4b2d9caa487874aa421df506 /tools | |
| parent | 7a4b02567e4de16d7478c10ffa07562b0daf320b (diff) | |
| parent | 3875cc6960266775e8078c782c8864516865be67 (diff) | |
| download | hdf5-6a27582a4488d4d18a0b6cd584b8950ab02b81a7.zip hdf5-6a27582a4488d4d18a0b6cd584b8950ab02b81a7.tar.gz hdf5-6a27582a4488d4d18a0b6cd584b8950ab02b81a7.tar.bz2 | |
[svn-r26781] Merge revisions 26305 through 26780 from trunk to vds branch.
Tested: ummon
Diffstat (limited to 'tools')
58 files changed, 377 insertions, 874 deletions
diff --git a/tools/Makefile.in b/tools/Makefile.in index 4bd80af..974e6b4 100644 --- a/tools/Makefile.in +++ b/tools/Makefile.in @@ -406,7 +406,6 @@ AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@ AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@ AM_MAKEFLAGS = @AM_MAKEFLAGS@ AR = @AR@ -AS = @AS@ AUTOCONF = @AUTOCONF@ AUTOHEADER = @AUTOHEADER@ AUTOMAKE = @AUTOMAKE@ @@ -438,7 +437,6 @@ DIRECT_VFD = @DIRECT_VFD@ DLLTOOL = @DLLTOOL@ DSYMUTIL = @DSYMUTIL@ DUMPBIN = @DUMPBIN@ -DYNAMIC_DIRS = @DYNAMIC_DIRS@ ECHO_C = @ECHO_C@ ECHO_N = @ECHO_N@ ECHO_T = @ECHO_T@ @@ -457,17 +455,14 @@ FCFLAGS_f90 = @FCFLAGS_f90@ FCLIBS = @FCLIBS@ FC_VERSION = @FC_VERSION@ FGREP = @FGREP@ -FILTERS = @FILTERS@ FSEARCH_DIRS = @FSEARCH_DIRS@ GREP = @GREP@ H5_CFLAGS = @H5_CFLAGS@ H5_CPPFLAGS = @H5_CPPFLAGS@ H5_CXXFLAGS = @H5_CXXFLAGS@ -H5_CXX_SHARED = @H5_CXX_SHARED@ H5_FCFLAGS = @H5_FCFLAGS@ H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@ H5_LDFLAGS = @H5_LDFLAGS@ -H5_LONE_COLON = @H5_LONE_COLON@ H5_VERSION = @H5_VERSION@ HADDR_T = @HADDR_T@ HAVE_DMALLOC = @HAVE_DMALLOC@ @@ -530,7 +525,6 @@ R_INTEGER = @R_INTEGER@ R_LARGE = @R_LARGE@ SEARCH = @SEARCH@ SED = @SED@ -SETX = @SETX@ SET_MAKE = @SET_MAKE@ SHELL = @SHELL@ SIZE_T = @SIZE_T@ @@ -545,10 +539,6 @@ TR = @TR@ TRACE_API = @TRACE_API@ UNAME_INFO = @UNAME_INFO@ USE_FILTER_DEFLATE = @USE_FILTER_DEFLATE@ -USE_FILTER_FLETCHER32 = @USE_FILTER_FLETCHER32@ -USE_FILTER_NBIT = @USE_FILTER_NBIT@ -USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@ -USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@ USE_FILTER_SZIP = @USE_FILTER_SZIP@ USINGMEMCHECKER = @USINGMEMCHECKER@ VERSION = @VERSION@ diff --git a/tools/h5copy/CMakeLists.txt b/tools/h5copy/CMakeLists.txt index 8c27536..7291197 100644 --- a/tools/h5copy/CMakeLists.txt +++ b/tools/h5copy/CMakeLists.txt @@ -11,7 +11,7 @@ INCLUDE_DIRECTORIES (${HDF5_TOOLS_SRC_DIR}/lib) # -------------------------------------------------------------------- add_executable (h5copy ${HDF5_TOOLS_H5COPY_SOURCE_DIR}/h5copy.c) TARGET_NAMING (h5copy ${LIB_TYPE}) -TARGET_C_PROPERTIES (h5copy " " " ") +TARGET_C_PROPERTIES (h5copy ${LIB_TYPE} " " " ") target_link_libraries (h5copy ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) set_target_properties (h5copy PROPERTIES FOLDER tools) @@ -20,8 +20,8 @@ set (H5_DEP_EXECUTABLES h5copy) if (BUILD_TESTING) if (HDF5_BUILD_GENERATORS AND NOT BUILD_SHARED_LIBS) add_executable (h5copygentest ${HDF5_TOOLS_H5COPY_SOURCE_DIR}/h5copygentest.c) - TARGET_NAMING (h5copygentest ${LIB_TYPE}) - TARGET_C_PROPERTIES (h5copygentest " " " ") + TARGET_NAMING (h5copygentest STATIC) + TARGET_C_PROPERTIES (h5copygentest STATIC " " " ") target_link_libraries (h5copygentest ${HDF5_LIB_TARGET}) set_target_properties (h5copygentest PROPERTIES FOLDER generator/tools) diff --git a/tools/h5copy/Makefile.in b/tools/h5copy/Makefile.in index e9a5e62..e128cfe 100644 --- a/tools/h5copy/Makefile.in +++ b/tools/h5copy/Makefile.in @@ -414,7 +414,6 @@ AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@ AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@ AM_MAKEFLAGS = @AM_MAKEFLAGS@ AR = @AR@ -AS = @AS@ AUTOCONF = @AUTOCONF@ AUTOHEADER = @AUTOHEADER@ AUTOMAKE = @AUTOMAKE@ @@ -446,7 +445,6 @@ DIRECT_VFD = @DIRECT_VFD@ DLLTOOL = @DLLTOOL@ DSYMUTIL = @DSYMUTIL@ DUMPBIN = @DUMPBIN@ -DYNAMIC_DIRS = @DYNAMIC_DIRS@ ECHO_C = @ECHO_C@ ECHO_N = @ECHO_N@ ECHO_T = @ECHO_T@ @@ -465,17 +463,14 @@ FCFLAGS_f90 = @FCFLAGS_f90@ FCLIBS = @FCLIBS@ FC_VERSION = @FC_VERSION@ FGREP = @FGREP@ -FILTERS = @FILTERS@ FSEARCH_DIRS = @FSEARCH_DIRS@ GREP = @GREP@ H5_CFLAGS = @H5_CFLAGS@ H5_CPPFLAGS = @H5_CPPFLAGS@ H5_CXXFLAGS = @H5_CXXFLAGS@ -H5_CXX_SHARED = @H5_CXX_SHARED@ H5_FCFLAGS = @H5_FCFLAGS@ H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@ H5_LDFLAGS = @H5_LDFLAGS@ -H5_LONE_COLON = @H5_LONE_COLON@ H5_VERSION = @H5_VERSION@ HADDR_T = @HADDR_T@ HAVE_DMALLOC = @HAVE_DMALLOC@ @@ -538,7 +533,6 @@ R_INTEGER = @R_INTEGER@ R_LARGE = @R_LARGE@ SEARCH = @SEARCH@ SED = @SED@ -SETX = @SETX@ SET_MAKE = @SET_MAKE@ SHELL = @SHELL@ SIZE_T = @SIZE_T@ @@ -553,10 +547,6 @@ TR = @TR@ TRACE_API = @TRACE_API@ UNAME_INFO = @UNAME_INFO@ USE_FILTER_DEFLATE = @USE_FILTER_DEFLATE@ -USE_FILTER_FLETCHER32 = @USE_FILTER_FLETCHER32@ -USE_FILTER_NBIT = @USE_FILTER_NBIT@ -USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@ -USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@ USE_FILTER_SZIP = @USE_FILTER_SZIP@ USINGMEMCHECKER = @USINGMEMCHECKER@ VERSION = @VERSION@ diff --git a/tools/h5diff/CMakeLists.txt b/tools/h5diff/CMakeLists.txt index f539d20..39095a5 100644 --- a/tools/h5diff/CMakeLists.txt +++ b/tools/h5diff/CMakeLists.txt @@ -14,7 +14,7 @@ add_executable (h5diff ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/h5diff_main.c ) TARGET_NAMING (h5diff ${LIB_TYPE}) -TARGET_C_PROPERTIES (h5diff " " " ") +TARGET_C_PROPERTIES (h5diff ${LIB_TYPE} " " " ") target_link_libraries (h5diff ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) set_target_properties (h5diff PROPERTIES FOLDER tools) @@ -26,7 +26,7 @@ if (H5_HAVE_PARALLEL) ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/ph5diff_main.c ) TARGET_NAMING (ph5diff ${LIB_TYPE}) - TARGET_C_PROPERTIES (ph5diff " " " ") + TARGET_C_PROPERTIES (ph5diff ${LIB_TYPE} " " " ") target_link_libraries (ph5diff ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) set_target_properties (ph5diff PROPERTIES FOLDER tools) endif (H5_HAVE_PARALLEL) @@ -37,8 +37,8 @@ if (BUILD_TESTING) # -------------------------------------------------------------------- if (HDF5_BUILD_GENERATORS AND NOT BUILD_SHARED_LIBS) add_executable (h5diffgentest ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/h5diffgentest.c) - TARGET_NAMING (h5diffgentest ${LIB_TYPE}) - TARGET_C_PROPERTIES (h5diffgentest " " " ") + TARGET_NAMING (h5diffgentest STATIC) + TARGET_C_PROPERTIES (h5diffgentest STATIC " " " ") target_link_libraries (h5diffgentest ${HDF5_LIB_TARGET}) set_target_properties (h5diffgentest PROPERTIES FOLDER generator/tools) diff --git a/tools/h5diff/Makefile.in b/tools/h5diff/Makefile.in index 29543a4..c95967d 100644 --- a/tools/h5diff/Makefile.in +++ b/tools/h5diff/Makefile.in @@ -421,7 +421,6 @@ AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@ AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@ AM_MAKEFLAGS = @AM_MAKEFLAGS@ AR = @AR@ -AS = @AS@ AUTOCONF = @AUTOCONF@ AUTOHEADER = @AUTOHEADER@ AUTOMAKE = @AUTOMAKE@ @@ -453,7 +452,6 @@ DIRECT_VFD = @DIRECT_VFD@ DLLTOOL = @DLLTOOL@ DSYMUTIL = @DSYMUTIL@ DUMPBIN = @DUMPBIN@ -DYNAMIC_DIRS = @DYNAMIC_DIRS@ ECHO_C = @ECHO_C@ ECHO_N = @ECHO_N@ ECHO_T = @ECHO_T@ @@ -472,17 +470,14 @@ FCFLAGS_f90 = @FCFLAGS_f90@ FCLIBS = @FCLIBS@ FC_VERSION = @FC_VERSION@ FGREP = @FGREP@ -FILTERS = @FILTERS@ FSEARCH_DIRS = @FSEARCH_DIRS@ GREP = @GREP@ H5_CFLAGS = @H5_CFLAGS@ H5_CPPFLAGS = @H5_CPPFLAGS@ H5_CXXFLAGS = @H5_CXXFLAGS@ -H5_CXX_SHARED = @H5_CXX_SHARED@ H5_FCFLAGS = @H5_FCFLAGS@ H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@ H5_LDFLAGS = @H5_LDFLAGS@ -H5_LONE_COLON = @H5_LONE_COLON@ H5_VERSION = @H5_VERSION@ HADDR_T = @HADDR_T@ HAVE_DMALLOC = @HAVE_DMALLOC@ @@ -545,7 +540,6 @@ R_INTEGER = @R_INTEGER@ R_LARGE = @R_LARGE@ SEARCH = @SEARCH@ SED = @SED@ -SETX = @SETX@ SET_MAKE = @SET_MAKE@ SHELL = @SHELL@ SIZE_T = @SIZE_T@ @@ -560,10 +554,6 @@ TR = @TR@ TRACE_API = @TRACE_API@ UNAME_INFO = @UNAME_INFO@ USE_FILTER_DEFLATE = @USE_FILTER_DEFLATE@ -USE_FILTER_FLETCHER32 = @USE_FILTER_FLETCHER32@ -USE_FILTER_NBIT = @USE_FILTER_NBIT@ -USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@ -USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@ USE_FILTER_SZIP = @USE_FILTER_SZIP@ USINGMEMCHECKER = @USINGMEMCHECKER@ VERSION = @VERSION@ diff --git a/tools/h5diff/h5diffgentest.c b/tools/h5diff/h5diffgentest.c index 80405e9..1b80317 100644 --- a/tools/h5diff/h5diffgentest.c +++ b/tools/h5diff/h5diffgentest.c @@ -317,10 +317,10 @@ int test_basic(const char *fname1, const char *fname2, const char *fname3) */ { - double data1[3][2] = {{1,1}, {1,1}, {0,0}}; - double data2[3][2] = {{0,1.1},{1.01,1.001},{0,1}}; - double data3[3][2] = {{100,100},{100,100},{100,100}}; - double data4[3][2] = {{105,120},{160,95},{80,40}}; + double data1[3][2] = {{ 1.0F, 1.0F}, { 1.00F, 1.000F}, { 0.0F, 0.0F}}; + double data2[3][2] = {{ 0.0F, 1.1F}, { 1.01F, 1.001F}, { 0.0F, 1.0F}}; + double data3[3][2] = {{100.0F, 100.0F}, {100.00F, 100.000F}, {100.0F, 100.0F}}; + double data4[3][2] = {{105.0F, 120.0F}, {160.00F, 95.000F}, { 80.0F, 40.0F}}; write_dset(gid1,2,dims2,"dset1",H5T_NATIVE_DOUBLE,data1); write_dset(gid2,2,dims2,"dset2",H5T_NATIVE_DOUBLE,data2); @@ -371,8 +371,8 @@ int test_basic(const char *fname1, const char *fname2, const char *fname3) *------------------------------------------------------------------------- */ { - double data9[3][2] = {{100,100},{100,0},{0,100}}; - double data10[3][2] ={{120,80}, {0,100},{0,50}}; + double data9[3][2] = {{100.0F, 100.0F}, {100.0F, 0.0F}, {0.0F, 100.0F}}; + double data10[3][2] ={{120.0F, 80.0F}, { 0.0F, 100.0F}, {0.0F, 50.0F}}; write_dset(gid1,2,dims2,"dset9",H5T_NATIVE_DOUBLE,data9); write_dset(gid1,2,dims2,"dset10",H5T_NATIVE_DOUBLE,data10); @@ -393,8 +393,14 @@ int test_basic(const char *fname1, const char *fname2, const char *fname3) /* epsilon = 0.0000000000000001 = 1e-16 * system epsilon for double : DBL_EPSILON = 2.22045E-16 */ - double data13[3][2] ={{0.0000000000000000, 0.0000000000000001},{0.0000000000000001, 0.0000000000000000},{0.00000000000000033, 0.0000000000000001}}; - double data14[3][2] ={{0.0000000000000000, 0.0000000000000004},{0.0000000000000002, 0.0000000000000001},{0.0000000000000001, 0.00000000000000000}}; + double data13[3][2] ={ + {H5_DOUBLE(0.0000000000000000), H5_DOUBLE(0.0000000000000001)}, + {H5_DOUBLE(0.0000000000000001), H5_DOUBLE(0.0000000000000000)}, + {H5_DOUBLE(0.00000000000000033), H5_DOUBLE(0.0000000000000001)}}; + double data14[3][2] ={ + {H5_DOUBLE(0.0000000000000000), H5_DOUBLE(0.0000000000000004)}, + {H5_DOUBLE(0.0000000000000002), H5_DOUBLE(0.0000000000000001)}, + {H5_DOUBLE(0.0000000000000001), H5_DOUBLE(0.00000000000000000)}}; write_dset(gid1,2,dims2,"fp1",H5T_NATIVE_FLOAT,data11); write_dset(gid1,2,dims2,"fp2",H5T_NATIVE_FLOAT,data12); @@ -412,7 +418,7 @@ int test_basic(const char *fname1, const char *fname2, const char *fname3) *------------------------------------------------------------------------- */ - long double data15[3][2] ={{1,1},{1,1},{1,1}}; + long double data15[3][2] ={{1.0L,1.0L},{1.0L,1.0L},{1.0L,1.0L}}; write_dset(gid1,2,dims2,"ld",H5T_NATIVE_LDOUBLE,data15); @@ -430,19 +436,19 @@ int test_basic(const char *fname1, const char *fname2, const char *fname3) float data15[6]; float data16[6]; - data15[0] = (float) sqrt( (double)-1 ); - data15[1] = 1; - data15[2] = (float) sqrt( (double)-1 ); - data15[3] = 1; - data15[4] = 1; - data15[5] = 1; + data15[0] = (float)HDsqrt(-1.0F); + data15[1] = 1.0F; + data15[2] = (float)HDsqrt(-1.0F); + data15[3] = 1.0F; + data15[4] = 1.0F; + data15[5] = 1.0F; - data16[0] = (float) sqrt( (double)-1 ); - data16[1] = (float) sqrt( (double)-1 ); - data16[2] = 1; - data16[3] = 1; - data16[4] = 1; - data16[5] = 1; + data16[0] = (float)HDsqrt(-1.0F); + data16[1] = (float)HDsqrt(-1.0F); + data16[2] = 1.0F; + data16[3] = 1.0F; + data16[4] = 1.0F; + data16[5] = 1.0F; write_dset(gid1,1,dims1,"fp15",H5T_NATIVE_FLOAT,data15); write_dset(gid1,1,dims1,"fp16",H5T_NATIVE_FLOAT,data16); @@ -458,19 +464,19 @@ int test_basic(const char *fname1, const char *fname2, const char *fname3) double data17[6]; double data18[6]; - data17[0] = sqrt( (double)-1 ); - data17[1] = 1; - data17[2] = sqrt( (double)-1 ); - data17[3] = 1; - data17[4] = 1; - data17[5] = 1; + data17[0] = HDsqrt(-1.0F); + data17[1] = 1.0F; + data17[2] = HDsqrt(-1.0F); + data17[3] = 1.0F; + data17[4] = 1.0F; + data17[5] = 1.0F; - data18[0] = (float) sqrt( (double)-1 ); - data18[1] = (float) sqrt( (double)-10000 ); - data18[2] = 1; - data18[3] = 1; - data18[4] = 1; - data18[5] = 1; + data18[0] = HDsqrt(-1.0F); + data18[1] = HDsqrt(-10000.0F); + data18[2] = 1.0F; + data18[3] = 1.0F; + data18[4] = 1.0F; + data18[5] = 1.0F; write_dset(gid1,1,dims1,"fp17",H5T_NATIVE_DOUBLE,data17); write_dset(gid1,1,dims1,"fp18",H5T_NATIVE_DOUBLE,data18); @@ -485,11 +491,11 @@ int test_basic(const char *fname1, const char *fname2, const char *fname3) float data19[6]; double data20[6]; - data19[0] = data19[1] = data19[2] = log(0); - data19[3] = data19[4] = data19[5] = -log(0); + data19[0] = data19[1] = data19[2] = (float)HDlog(0.0F); + data19[3] = data19[4] = data19[5] = (float)-HDlog(0.0F); - data20[0] = data20[1] = data20[2] = log(0); - data20[3] = data20[4] = data20[5] = -log(0); + data20[0] = data20[1] = data20[2] = HDlog(0.0F); + data20[3] = data20[4] = data20[5] = -HDlog(0.0F); write_dset(gid1,1,dims1,"fp19",H5T_NATIVE_FLOAT,data19); write_dset(gid1,1,dims1,"fp19_COPY",H5T_NATIVE_FLOAT,data19); @@ -514,15 +520,15 @@ int test_basic(const char *fname1, const char *fname2, const char *fname3) size_t type_size; hid_t tid; - buf1[0].d = sqrt( (double)-1 ); - buf1[0].f = (float) sqrt( (double)-1 ); - buf2[0].d = sqrt( (double)-1 ); - buf2[0].f = (float) sqrt( (double)-1 ); + buf1[0].d = HDsqrt(-1.0F); + buf1[0].f = (float)HDsqrt(-1.0F); + buf2[0].d = HDsqrt(-1.0F); + buf2[0].f = (float)HDsqrt(-1.0F); - buf1[1].d = sqrt( (double)-1 ); - buf1[1].f = (float) sqrt( (double)-1 ); - buf2[1].d = 0; - buf2[1].f = 0; + buf1[1].d = HDsqrt(-1.0F); + buf1[1].f = (float)HDsqrt(-1.0F); + buf2[1].d = 0.0F; + buf2[1].f = 0.0F; type_size = sizeof( cmp1_t ); tid = H5Tcreate (H5T_COMPOUND, type_size ); @@ -555,7 +561,7 @@ int test_basic(const char *fname1, const char *fname2, const char *fname3) int i; } cmp3_t; - double data2[6] = {0,0,0,0,0,0}; + double data2[6] = {0.0F, 0.0F, 0.0F, 0.0F, 0.0F, 0.0F}; int data3[6] = {0,0,0,0,0,0}; int data4[3][2] = {{0,0},{0,0},{0,0}}; int data5[2][2] = {{0,0},{0,0}}; @@ -770,10 +776,10 @@ int test_datatypes(const char *fname) int buf3b[3][2] = {{1,1},{3,4},{5,6}}; long buf4a[3][2] = {{1,1},{1,1},{1,1}}; long buf4b[3][2] = {{1,1},{3,4},{5,6}}; - float buf5a[3][2] = {{1,1},{1,1},{1,1}}; - float buf5b[3][2] = {{1,1},{3,4},{5,6}}; - double buf6a[3][2] = {{1,1},{1,1},{1,1}}; - double buf6b[3][2] = {{1,1},{3,4},{5,6}}; + float buf5a[3][2] = {{1.0F, 1.0F}, {1.0F, 1.0F}, {1.0F, 1.0F}}; + float buf5b[3][2] = {{1.0F, 1.0F}, {3.0F, 4.0F}, {5.0F, 6.0F}}; + double buf6a[3][2] = {{1.0F, 1.0F}, {1.0F, 1.0F}, {1.0F, 1.0F}}; + double buf6b[3][2] = {{1.0F, 1.0F}, {3.0F, 4.0F}, {5.0F, 6.0F}}; /*unsigned/signed test signed char -128 to 127 @@ -1025,10 +1031,10 @@ static int test_attributes_verbose_level(const char *fname1, const char *fname2) /* file1 attr */ int f1_attr_idata[2]= {1,2}; /* integer */ - float f1_attr_fdata[2]= {1.1,2.2}; /* float */ + float f1_attr_fdata[2]= {1.1F,2.2F}; /* float */ /* file2 attr */ int f2_attr_idata[2]= {2,3}; /* integer */ - float f2_attr_fdata[2]= {2.1,3.2}; /* float */ + float f2_attr_fdata[2]= {2.1F,3.2F}; /* float */ /*---------------------------------------------------------------------- @@ -4363,7 +4369,7 @@ static void test_comps_array (const char *fname, const char *dset, const char *a for(j=0; j < SDIM_CMPD_ARRAY; j++) { wdata[i].cmpd2[j].i2 = i*10 + diff; - wdata[i].cmpd2[j].f2 = (float)(i*10.5) + diff; + wdata[i].cmpd2[j].f2 = (float)(i*10.5F) + diff; } /* end for */ } @@ -4480,7 +4486,7 @@ static void test_comps_vlen (const char * fname, const char *dset, const char *a for(j=0; j<(i+1); j++) { ((cmpd2_t *)wdata[i].vl.p)[j].i2 = i*10 + diff; - ((cmpd2_t *)wdata[i].vl.p)[j].f2 = (float)(i*10.5) + diff; + ((cmpd2_t *)wdata[i].vl.p)[j].f2 = (float)(i*10.5F) + diff; } /* end for */ } /* end for */ @@ -4606,7 +4612,7 @@ static void test_comps_array_vlen (const char * fname, const char *dset,const ch { /* Initialize data of compound3 */ ((cmpd3_t *)wdata[i].cmpd2[j].vl.p)[k].i3 = j*10 + diff; - ((cmpd3_t *)wdata[i].cmpd2[j].vl.p)[k].f3 = (float)(j*10.5) + diff; + ((cmpd3_t *)wdata[i].cmpd2[j].vl.p)[k].f3 = (float)(j*10.5F) + diff; } /* end for */ } /* end for */ } @@ -4753,8 +4759,8 @@ static void test_comps_vlen_arry (const char * fname, const char *dset, const ch for (k=0; k < SDIM_CMPD_ARRAY; k++) { /* compound 3 data */ - ((cmpd2_t *)(wdata[i].vl.p))[j].cmpd3[k].i3 = k*10.5 + diff; - ((cmpd2_t *)(wdata[i].vl.p))[j].cmpd3[k].f3 = (float)(k*10.5) + diff; + ((cmpd2_t *)(wdata[i].vl.p))[j].cmpd3[k].i3 = k*10.5F + diff; + ((cmpd2_t *)(wdata[i].vl.p))[j].cmpd3[k].f3 = (float)(k*10.5F) + diff; } } /* end for */ } /* end for */ @@ -5246,27 +5252,27 @@ void write_attr_in(hid_t loc_id, char buf1[2][STR_SIZE]= {"ab","de"}; /* string */ char *buf1a[2]; /* VL string */ char buf2[2]= {1,2}; /* bitfield, opaque */ - s_t buf3[2]= {{1,2},{3,4}}; /* compound */ + s_t buf3[2]= {{1,2.0F},{3,4.0F}}; /* compound */ hobj_ref_t buf4[2]; /* reference */ e_t buf45[2]= {RED,RED}; /* enum */ hvl_t buf5[2]; /* vlen */ hsize_t dimarray[1]={3}; /* array dimension */ int buf6[2][3]= {{1,2,3},{4,5,6}}; /* array */ int buf7[2]= {1,2}; /* integer */ - float buf8[2]= {1,2}; /* float */ + float buf8[2]= {1.0F, 2.0F}; /* float */ /* create 2D attributes with dimension [3][2], 6 elements */ hsize_t dims2[2]={3,2}; - char buf12[3][2][STR_SIZE]= {{"ab","cd"},{"ef","gh"},{"ij","kl"}}; /* string */ - char *buf12a[3][2]; /* VL string */ - char buf22[3][2]= {{1,2},{3,4},{5,6}}; /* bitfield, opaque */ - s_t buf32[6]= {{1,2},{3,4},{5,6},{7,8},{9,10},{11,12}}; /* compound */ - hobj_ref_t buf42[3][2]; /* reference */ - e_t buf452[3][2]; /* enum */ - hvl_t buf52[3][2]; /* vlen */ - int buf62[6][3]= {{1,2,3},{4,5,6},{7,8,9},{10,11,12},{13,14,15},{16,17,18}}; /* array */ - int buf72[3][2]= {{1,2},{3,4},{5,6}}; /* integer */ - float buf82[3][2]= {{1,2},{3,4},{5,6}}; /* float */ + char buf12[3][2][STR_SIZE]= {{"ab","cd"},{"ef","gh"},{"ij","kl"}}; /* string */ + char *buf12a[3][2]; /* VL string */ + char buf22[3][2]= {{1,2},{3,4},{5,6}}; /* bitfield, opaque */ + s_t buf32[6]= {{1,2.0F},{3,4.0F},{5,6.0F},{7,8.0F},{9,10.0F},{11,12.0F}}; /* compound */ + hobj_ref_t buf42[3][2]; /* reference */ + e_t buf452[3][2]; /* enum */ + hvl_t buf52[3][2]; /* vlen */ + int buf62[6][3]= {{1,2,3},{4,5,6},{7,8,9},{10,11,12},{13,14,15},{16,17,18}}; /* array */ + int buf72[3][2]= {{1,2},{3,4},{5,6}}; /* integer */ + float buf82[3][2]= {{1.0F,2.0F},{3.0F,4.0F},{5.0F,6.0F}}; /* float */ /* create 3D attributes with dimension [4][3][2], 24 elements */ hsize_t dims3[3]={4,3,2}; @@ -6017,7 +6023,7 @@ void write_attr_in(hid_t loc_id, for (k = 0; k < 2; k++) { if (make_diffs) { buf33[i][j][k].a=0; - buf33[i][j][k].b=0; + buf33[i][j][k].b=0.0F; } else { buf33[i][j][k].a=n++; @@ -6231,7 +6237,7 @@ void write_attr_in(hid_t loc_id, for (k = 0; k < 2; k++) { if (make_diffs) { buf73[i][j][k]=0; - buf83[i][j][k]=0; + buf83[i][j][k]=0.0F; } else { buf73[i][j][k]=n++; @@ -6303,26 +6309,26 @@ void write_dset_in(hid_t loc_id, char buf1[2][STR_SIZE]= {"ab","de"}; /* string */ char *buf1a[2]; /* VL string */ char buf2[2]= {1,2}; /* bitfield, opaque */ - s_t buf3[2]= {{1,2},{3,4}}; /* compound */ + s_t buf3[2]= {{1,2.0F},{3,4.0F}}; /* compound */ hobj_ref_t buf4[2]; /* reference */ e_t buf45[2]= {RED,GREEN}; /* enum */ hvl_t buf5[2]; /* vlen */ hsize_t dimarray[1]={3}; /* array dimension */ int buf6[2][3]= {{1,2,3},{4,5,6}}; /* array */ int buf7[2]= {1,2}; /* integer */ - float buf8[2]= {1,2}; /* float */ + float buf8[2]= {1.0F,2.0F}; /* float */ /* create 2D attributes with dimension [3][2], 6 elements */ hsize_t dims2[2]={3,2}; char buf12[3][2][STR_SIZE]= {{"ab","cd"},{"ef","gh"},{"ij","kl"}}; /* string */ char *buf12a[3][2]; /* VL string */ char buf22[3][2]= {{1,2},{3,4},{5,6}}; /* bitfield, opaque */ - s_t buf32[6]= {{1,2},{3,4},{5,6},{7,8},{9,10},{11,12}}; /* compound */ + s_t buf32[6]= {{1,2.0F},{3,4.0F},{5,6.0F},{7,8.0F},{9,10.0F},{11,12.0F}}; /* compound */ hobj_ref_t buf42[3][2]; /* reference */ hvl_t buf52[3][2]; /* vlen */ int buf62[6][3]= {{1,2,3},{4,5,6},{7,8,9},{10,11,12},{13,14,15},{16,17,18}}; /* array */ int buf72[3][2]= {{1,2},{3,4},{5,6}}; /* integer */ - float buf82[3][2]= {{1,2},{3,4},{5,6}}; /* float */ + float buf82[3][2]= {{1.0F,2.0F},{3.0F,4.0F},{5.0F,6.0F}}; /* float */ /* create 3D attributes with dimension [4][3][2], 24 elements */ hsize_t dims3[3]={4,3,2}; @@ -6859,7 +6865,7 @@ void write_dset_in(hid_t loc_id, if (make_diffs) { buf33[i][j][k].a=0; - buf33[i][j][k].b=0; + buf33[i][j][k].b=0.0F; } else { buf33[i][j][k].a=n++; @@ -6968,7 +6974,7 @@ void write_dset_in(hid_t loc_id, for (k = 0; k < 2; k++) { if (make_diffs) { buf73[i][j][k]=0; - buf83[i][j][k]=0; + buf83[i][j][k]=0.0F; } else { buf73[i][j][k]=n++; diff --git a/tools/h5dump/CMakeLists.txt b/tools/h5dump/CMakeLists.txt index 4559ae3..7658c04 100644 --- a/tools/h5dump/CMakeLists.txt +++ b/tools/h5dump/CMakeLists.txt @@ -15,7 +15,7 @@ add_executable (h5dump ${HDF5_TOOLS_H5DUMP_SOURCE_DIR}/h5dump_xml.c ) TARGET_NAMING (h5dump ${LIB_TYPE}) -TARGET_C_PROPERTIES (h5dump " " " ") +TARGET_C_PROPERTIES (h5dump ${LIB_TYPE} " " " ") target_link_libraries (h5dump ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) set_target_properties (h5dump PROPERTIES FOLDER tools) @@ -27,8 +27,8 @@ if (BUILD_TESTING) # -------------------------------------------------------------------- if (HDF5_BUILD_GENERATORS AND NOT BUILD_SHARED_LIBS) add_executable (h5dumpgentest ${HDF5_TOOLS_H5DUMP_SOURCE_DIR}/h5dumpgentest.c) - TARGET_NAMING (h5dumpgentest ${LIB_TYPE}) - TARGET_C_PROPERTIES (h5dumpgentest " " " ") + TARGET_NAMING (h5dumpgentest STATIC) + TARGET_C_PROPERTIES (h5dumpgentest STATIC " " " ") target_link_libraries (h5dumpgentest ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET}) set_target_properties (h5dumpgentest PROPERTIES FOLDER generator/tools) diff --git a/tools/h5dump/CMakeTests.cmake b/tools/h5dump/CMakeTests.cmake index afb482e..00ec760 100644 --- a/tools/h5dump/CMakeTests.cmake +++ b/tools/h5dump/CMakeTests.cmake @@ -1340,30 +1340,14 @@ set (USE_FILTER_SZIP "true") endif (H5_HAVE_FILTER_SZIP) - if (H5_HAVE_FILTER_SHUFFLE) - set (USE_FILTER_SHUFFLE "true") - endif (H5_HAVE_FILTER_SHUFFLE) - - if (H5_HAVE_FILTER_FLETCHER32) - set (USE_FILTER_FLETCHER32 "true") - endif (H5_HAVE_FILTER_FLETCHER32) - - if (H5_HAVE_FILTER_NBIT) - set (USE_FILTER_NBIT "true") - endif (H5_HAVE_FILTER_NBIT) - - if (H5_HAVE_FILTER_SCALEOFFSET) - set (USE_FILTER_SCALEOFFSET "true") - endif (H5_HAVE_FILTER_SCALEOFFSET) - - if (USE_FILTER_DEFLATE AND USE_FILTER_SHUFFLE AND USE_FILTER_FLETCHER32 AND USE_FILTER_NBIT AND USE_FILTER_SCALEOFFSET) + if (USE_FILTER_DEFLATE) # data read internal filters ADD_H5_TEST (treadintfilter 0 --enable-error-stack -d deflate -d shuffle -d fletcher32 -d nbit -d scaleoffset tfilters.h5) if (HDF5_ENABLE_SZIP_SUPPORT) # data read all filters ADD_H5_TEST (treadfilter 0 --enable-error-stack -d all -d szip tfilters.h5) endif (HDF5_ENABLE_SZIP_SUPPORT) - endif (USE_FILTER_DEFLATE AND USE_FILTER_SHUFFLE AND USE_FILTER_FLETCHER32 AND USE_FILTER_NBIT AND USE_FILTER_SCALEOFFSET) + endif (USE_FILTER_DEFLATE) # test for displaying objects with very long names ADD_H5_TEST (tlonglinks 0 --enable-error-stack tlonglinks.h5) diff --git a/tools/h5dump/CMakeTestsXML.cmake b/tools/h5dump/CMakeTestsXML.cmake index a939d78..0a667c4 100644 --- a/tools/h5dump/CMakeTestsXML.cmake +++ b/tools/h5dump/CMakeTestsXML.cmake @@ -411,14 +411,6 @@ ADD_XML_H5_TEST (tempty-dtd.h5 0 --use-dtd tempty.h5) ADD_XML_H5_TEST (tempty-dtd-2.h5 0 -u tempty.h5) - # The lone colon here confuses some systems (Cray X1). Skip - # it if configure detects that this is a problem. - set (TESTTYPE "TEST") - if (NOT ${H5_LONE_COLON}) - set (TESTTYPE "SKIP") - endif (NOT ${H5_LONE_COLON}) - ADD_XML_SKIP_H5_TEST (tempty-nons.h5 0 ${TESTTYPE} -X : tempty.h5) - ADD_XML_H5_TEST (tempty-nons-2.h5 0 --xml-ns=: tempty.h5) ## Some of these combinations are syntactically correct but diff --git a/tools/h5dump/Makefile.in b/tools/h5dump/Makefile.in index fb8cc9b..7371adf 100644 --- a/tools/h5dump/Makefile.in +++ b/tools/h5dump/Makefile.in @@ -420,7 +420,6 @@ AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@ AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@ AM_MAKEFLAGS = @AM_MAKEFLAGS@ AR = @AR@ -AS = @AS@ AUTOCONF = @AUTOCONF@ AUTOHEADER = @AUTOHEADER@ AUTOMAKE = @AUTOMAKE@ @@ -452,7 +451,6 @@ DIRECT_VFD = @DIRECT_VFD@ DLLTOOL = @DLLTOOL@ DSYMUTIL = @DSYMUTIL@ DUMPBIN = @DUMPBIN@ -DYNAMIC_DIRS = @DYNAMIC_DIRS@ ECHO_C = @ECHO_C@ ECHO_N = @ECHO_N@ ECHO_T = @ECHO_T@ @@ -471,17 +469,14 @@ FCFLAGS_f90 = @FCFLAGS_f90@ FCLIBS = @FCLIBS@ FC_VERSION = @FC_VERSION@ FGREP = @FGREP@ -FILTERS = @FILTERS@ FSEARCH_DIRS = @FSEARCH_DIRS@ GREP = @GREP@ H5_CFLAGS = @H5_CFLAGS@ H5_CPPFLAGS = @H5_CPPFLAGS@ H5_CXXFLAGS = @H5_CXXFLAGS@ -H5_CXX_SHARED = @H5_CXX_SHARED@ H5_FCFLAGS = @H5_FCFLAGS@ H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@ H5_LDFLAGS = @H5_LDFLAGS@ -H5_LONE_COLON = @H5_LONE_COLON@ H5_VERSION = @H5_VERSION@ HADDR_T = @HADDR_T@ HAVE_DMALLOC = @HAVE_DMALLOC@ @@ -544,7 +539,6 @@ R_INTEGER = @R_INTEGER@ R_LARGE = @R_LARGE@ SEARCH = @SEARCH@ SED = @SED@ -SETX = @SETX@ SET_MAKE = @SET_MAKE@ SHELL = @SHELL@ SIZE_T = @SIZE_T@ @@ -559,10 +553,6 @@ TR = @TR@ TRACE_API = @TRACE_API@ UNAME_INFO = @UNAME_INFO@ USE_FILTER_DEFLATE = @USE_FILTER_DEFLATE@ -USE_FILTER_FLETCHER32 = @USE_FILTER_FLETCHER32@ -USE_FILTER_NBIT = @USE_FILTER_NBIT@ -USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@ -USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@ USE_FILTER_SZIP = @USE_FILTER_SZIP@ USINGMEMCHECKER = @USINGMEMCHECKER@ VERSION = @VERSION@ diff --git a/tools/h5dump/binread.c b/tools/h5dump/binread.c index 5abb9af..74db92c 100644 --- a/tools/h5dump/binread.c +++ b/tools/h5dump/binread.c @@ -49,8 +49,7 @@ static void usage (void) { - fprintf(stderr, "\ - usage: binread FILE_NAME\n"); + fprintf(stderr, "usage: binread FILE_NAME\n"); } /*------------------------------------------------------------------------- @@ -64,38 +63,35 @@ usage (void) int main (int argc, const char *argv[]) { - FILE *stream; - int numread; - TYPE buf[NELMTS]; - size_t i, nelmts = NELMTS; - char *fname=NULL; - - if (argc != 2) - { - usage(); - exit(1); - } - - fname = strdup(argv[1]); - - if( (stream = fopen(fname, "rb" )) != NULL ) - { - numread = fread( buf, sizeof( TYPE ), nelmts, stream ); - printf( "Number of items read = %d\n", numread ); - - for (i = 0; i < nelmts; i++) - { - printf(FORMAT,buf[i]); - } - printf("\n"); - - fclose( stream ); - } - else - printf( "File %s could not be opened\n",fname ); - - free(fname); - - return 0; + FILE *stream; + size_t numread; + TYPE buf[NELMTS]; + size_t i, nelmts = NELMTS; + char *fname=NULL; + + if (argc != 2) { + usage(); + exit(1); + } + + fname = strdup(argv[1]); + + if((stream = fopen(fname, "rb")) != NULL) { + numread = fread(buf, sizeof( TYPE ), nelmts, stream); + printf("Number of items read = %llu\n", (unsigned long long)numread); + + for (i = 0; i < nelmts; i++) { + printf(FORMAT,buf[i]); + } + printf("\n"); + + fclose(stream); + } + else + printf("File %s could not be opened\n", fname); + + free(fname); + + return 0; } diff --git a/tools/h5dump/errfiles/tarray1_big.err b/tools/h5dump/errfiles/tarray1_big.err index 457afdd..7a0fd7b 100644 --- a/tools/h5dump/errfiles/tarray1_big.err +++ b/tools/h5dump/errfiles/tarray1_big.err @@ -2,59 +2,23 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Rdereference2(): unable to dereference object major: References minor: Unable to initialize object - #001: (file name) line (number) in H5R_dereference(): Unable to read dataset region information - major: References - minor: Read failed - #002: (file name) line (number) in H5HG_read(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #003: (file name) line (number) in H5HG_protect(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #004: (file name) line (number) in H5AC_protect(): H5C_protect() failed. - major: Object cache - minor: Unable to protect metadata - #005: (file name) line (number) in H5C_protect(): incorrect cache entry type - major: Object cache - minor: Inappropriate type + #001: (file name) line (number) in H5R_dereference(): Undefined reference pointer + major: Invalid arguments to routine + minor: Bad value HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Rdereference2(): unable to dereference object major: References minor: Unable to initialize object - #001: (file name) line (number) in H5R_dereference(): Unable to read dataset region information - major: References - minor: Read failed - #002: (file name) line (number) in H5HG_read(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #003: (file name) line (number) in H5HG_protect(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #004: (file name) line (number) in H5AC_protect(): H5C_protect() failed. - major: Object cache - minor: Unable to protect metadata - #005: (file name) line (number) in H5C_protect(): incorrect cache entry type - major: Object cache - minor: Inappropriate type + #001: (file name) line (number) in H5R_dereference(): Undefined reference pointer + major: Invalid arguments to routine + minor: Bad value HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Rdereference2(): unable to dereference object major: References minor: Unable to initialize object - #001: (file name) line (number) in H5R_dereference(): Unable to read dataset region information - major: References - minor: Read failed - #002: (file name) line (number) in H5HG_read(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #003: (file name) line (number) in H5HG_protect(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #004: (file name) line (number) in H5AC_protect(): H5C_protect() failed. - major: Object cache - minor: Unable to protect metadata - #005: (file name) line (number) in H5C_protect(): incorrect cache entry type - major: Object cache - minor: Inappropriate type + #001: (file name) line (number) in H5R_dereference(): Undefined reference pointer + major: Invalid arguments to routine + minor: Bad value H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): #000: (file name) line (number) in h5tools_dump_simple_data(): H5Rdereference failed major: Failure in tools library diff --git a/tools/h5dump/errfiles/tattrregR.err b/tools/h5dump/errfiles/tattrregR.err index 7ab9afd..9449a6d 100644 --- a/tools/h5dump/errfiles/tattrregR.err +++ b/tools/h5dump/errfiles/tattrregR.err @@ -2,40 +2,16 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Rdereference2(): unable to dereference object major: References minor: Unable to initialize object - #001: (file name) line (number) in H5R_dereference(): Unable to read dataset region information - major: References - minor: Read failed - #002: (file name) line (number) in H5HG_read(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #003: (file name) line (number) in H5HG_protect(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #004: (file name) line (number) in H5AC_protect(): H5C_protect() failed. - major: Object cache - minor: Unable to protect metadata - #005: (file name) line (number) in H5C_protect(): incorrect cache entry type - major: Object cache - minor: Inappropriate type + #001: (file name) line (number) in H5R_dereference(): Undefined reference pointer + major: Invalid arguments to routine + minor: Bad value HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Rdereference2(): unable to dereference object major: References minor: Unable to initialize object - #001: (file name) line (number) in H5R_dereference(): Unable to read dataset region information - major: References - minor: Read failed - #002: (file name) line (number) in H5HG_read(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #003: (file name) line (number) in H5HG_protect(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #004: (file name) line (number) in H5AC_protect(): H5C_protect() failed. - major: Object cache - minor: Unable to protect metadata - #005: (file name) line (number) in H5C_protect(): incorrect cache entry type - major: Object cache - minor: Inappropriate type + #001: (file name) line (number) in H5R_dereference(): Undefined reference pointer + major: Invalid arguments to routine + minor: Bad value H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): #000: (file name) line (number) in h5tools_dump_simple_data(): H5Rdereference failed major: Failure in tools library diff --git a/tools/h5dump/errfiles/tdataregR.err b/tools/h5dump/errfiles/tdataregR.err index 7ab9afd..9449a6d 100644 --- a/tools/h5dump/errfiles/tdataregR.err +++ b/tools/h5dump/errfiles/tdataregR.err @@ -2,40 +2,16 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Rdereference2(): unable to dereference object major: References minor: Unable to initialize object - #001: (file name) line (number) in H5R_dereference(): Unable to read dataset region information - major: References - minor: Read failed - #002: (file name) line (number) in H5HG_read(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #003: (file name) line (number) in H5HG_protect(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #004: (file name) line (number) in H5AC_protect(): H5C_protect() failed. - major: Object cache - minor: Unable to protect metadata - #005: (file name) line (number) in H5C_protect(): incorrect cache entry type - major: Object cache - minor: Inappropriate type + #001: (file name) line (number) in H5R_dereference(): Undefined reference pointer + major: Invalid arguments to routine + minor: Bad value HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Rdereference2(): unable to dereference object major: References minor: Unable to initialize object - #001: (file name) line (number) in H5R_dereference(): Unable to read dataset region information - major: References - minor: Read failed - #002: (file name) line (number) in H5HG_read(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #003: (file name) line (number) in H5HG_protect(): unable to protect global heap - major: Heap - minor: Unable to protect metadata - #004: (file name) line (number) in H5AC_protect(): H5C_protect() failed. - major: Object cache - minor: Unable to protect metadata - #005: (file name) line (number) in H5C_protect(): incorrect cache entry type - major: Object cache - minor: Inappropriate type + #001: (file name) line (number) in H5R_dereference(): Undefined reference pointer + major: Invalid arguments to routine + minor: Bad value H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): #000: (file name) line (number) in h5tools_dump_simple_data(): H5Rdereference failed major: Failure in tools library diff --git a/tools/h5dump/h5dump_xml.c b/tools/h5dump/h5dump_xml.c index 64667cb..6ccbc8c 100644 --- a/tools/h5dump/h5dump_xml.c +++ b/tools/h5dump/h5dump_xml.c @@ -3563,7 +3563,7 @@ xml_dump_fill_value(hid_t dcpl, hid_t type) /* Render the element */ h5tools_str_reset(&buffer); - h5tools_str_append(&buffer, "\"%f\"", *(float *) buf); + h5tools_str_append(&buffer, "\"%f\"", (double)*(float *)buf); h5tools_render_element(rawoutstream, outputformat, &ctx, &buffer, &curr_pos, (size_t)outputformat->line_ncols, (hsize_t)0, (hsize_t)0); ctx.need_prefix = TRUE; diff --git a/tools/h5dump/h5dumpgentest.c b/tools/h5dump/h5dumpgentest.c index 82273a3..c04afe9 100644 --- a/tools/h5dump/h5dumpgentest.c +++ b/tools/h5dump/h5dumpgentest.c @@ -429,7 +429,7 @@ gent_dataset(void) for(i = 0; i < 30; i++) for(j = 0; j < 20; j++) - dset2[i][j] = 0.0001 * j + i; + dset2[i][j] = 0.0001F * j + i; H5Dwrite(dataset, H5T_NATIVE_DOUBLE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset2); @@ -524,7 +524,7 @@ gent_attribute(void) space = H5Screate_simple(1, dims, NULL); attr = H5Acreate2(root, "attr3", H5T_IEEE_F64BE, space, H5P_DEFAULT, H5P_DEFAULT); - for(i = 0; i < 10; i++) d[i] = 0.1 * i; + for(i = 0; i < 10; i++) d[i] = 0.1F * i; H5Awrite(attr, H5T_NATIVE_DOUBLE, d); H5Sclose(space); @@ -952,16 +952,16 @@ static void gent_compound_dt(void) { /* test compound data type */ for(i = 0; i < (int)sdim; i++) { dset1[i].a = i; dset1[i].b = (float)(i*i); - dset1[i].c = (float)(1./(i+1)); + dset1[i].c = (float)(1.0F/(i+1)); dset2[i].a = i; - dset2[i].b = (float)(i+ i*0.1); + dset2[i].b = (float)(i+ i*0.1F); dset4[i].a = i; dset4[i].b = (float)(i+3); dset5[i].a = i; - dset5[i].b = (float)(i*0.1); + dset5[i].b = (float)(i*0.1F); } @@ -1137,16 +1137,16 @@ static void gent_compound_dt2(void) { /* test compound data type */ for(i = 0; i < (int)sdim; i++) { dset1[i].a = i; dset1[i].b = (float)(i*i); - dset1[i].c = (float)(1./(i+1)); + dset1[i].c = (float)(1.0F/(i+1)); dset2[i].a = i; - dset2[i].b = (float)(i+ i*0.1); + dset2[i].b = (float)(i+ i*0.1F); dset4[i].a = i; - dset4[i].b = (float)(i*1.0); + dset4[i].b = (float)(i*1.0F); dset5[i].a = i; - dset5[i].b = (float)(i*1.0); + dset5[i].b = (float)(i*1.0F); } fid = H5Fcreate(FILE9, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); @@ -1386,7 +1386,7 @@ static void gent_all(void) space = H5Screate_simple(1, dims, NULL); dataset = H5Dcreate2(group, "dset2.1", H5T_IEEE_F32BE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); for(i = 0; i < 10; i++) - dset2_1[i] = (float)(i * 0.1 + 1); + dset2_1[i] = (float)(i * 0.1F + 1); H5Dwrite(dataset, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset2_1); H5Sclose(space); H5Dclose(dataset); @@ -1397,7 +1397,7 @@ static void gent_all(void) dataset = H5Dcreate2(group, "dset2.2", H5T_IEEE_F32BE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); for(i = 0; i < 3; i++) for(j = 0; j < 5; j++) - dset2_2[i][j] = (float)((i + 1) * j * 0.1); + dset2_2[i][j] = (float)((i + 1) * j * 0.1F); H5Dwrite(dataset, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset2_2); H5Sclose(space); H5Dclose(dataset); @@ -1565,7 +1565,7 @@ gent_many(void) space2 = H5Screate_simple(1, dims, NULL); attr = H5Acreate2(dataset, "attr3", H5T_IEEE_F64BE, space2, H5P_DEFAULT, H5P_DEFAULT); for(i = 0; i < 10; i++) - d[i] = 0.1 * i; + d[i] = 0.1F * i; H5Awrite(attr, H5T_NATIVE_DOUBLE, d); H5Sclose(space2); H5Aclose(attr); @@ -2378,10 +2378,10 @@ static void gent_nestcomp(void) for(i = 0; i< 10; i++) { s1[i].a = i; s1[i].b = (float)(i*i); - s1[i].c = 1./(i+1); + s1[i].c = 1.0F/(i+1); s1[i].d.a = 65 + i; - s1[i].d.b[0] = -100.; - s1[i].d.b[1] = 100.; + s1[i].d.b[0] = -100.0F; + s1[i].d.b[1] = 100.0F; } /* @@ -2582,7 +2582,7 @@ static void gent_vldatatypes(void) wdata[i].len = i + 1; for(j = 0; j < i + 1; j++) - ((float *)wdata[i].p)[j] = (float)(i * 10 + ((float)j) / 10.0); + ((float *)wdata[i].p)[j] = (float)(i * 10 + ((float)j) / 10.0F); } /* write out the floats in little-endian format */ @@ -2716,7 +2716,7 @@ static void gent_vldatatypes3(void) /* Allocate and initialize VL data to write */ for(i=0; i<SPACE1_DIM1; i++) { wdata[i].i=i*10; - wdata[i].f=(float)((i*20)/3.0); + wdata[i].f=(float)((i*20)/3.0F); wdata[i].v.p=HDmalloc((i+1)*sizeof(unsigned int)); wdata[i].v.len=i+1; for(j=0; j<(i+1); j++) @@ -2788,7 +2788,7 @@ static void gent_vldatatypes4(void) wdata[i].len=i+1; for(j=0; j<(i+1); j++) { ((s1 *)wdata[i].p)[j].i=i*10+j; - ((s1 *)wdata[i].p)[j].f=(float)((i*20+j)/3.0); + ((s1 *)wdata[i].p)[j].f=(float)((i*20+j)/3.0F); } /* end for */ } /* end for */ @@ -3159,7 +3159,7 @@ static void gent_array4(void) for(i=0; i<SPACE1_DIM1; i++) for(j=0; j<ARRAY1_DIM1; j++) { wdata[i][j].i=i*10+j; - wdata[i][j].f=(float)(i*2.5+j); + wdata[i][j].f=(float)(i*2.5F+j); } /* end for */ /* Create file */ @@ -3227,7 +3227,7 @@ static void gent_array5(void) for(j=0; j<ARRAY1_DIM1; j++) { wdata[i][j].i=i*10+j; for(k=0; k<ARRAY1_DIM1; k++) - wdata[i][j].f[k]=(float)(i*10+j*2.5+k); + wdata[i][j].f[k]=(float)(i*10+j*2.5F+k); } /* end for */ /* Create file */ @@ -4933,10 +4933,10 @@ static void gent_compound_complex(void) } } - Array1[m].e = (float)( m * .96 ); + Array1[m].e = (float)( m * 0.96F ); for(n = 0; n < F41_ARRAY_DIMf; n++) { - Array1[m].f[n] = ( m * 1024.9637 ); + Array1[m].f[n] = ( m * 1024.9637F ); } Array1[m].g = 'm'; @@ -5433,7 +5433,7 @@ static void gent_filters(void) * shuffle *------------------------------------------------------------------------- */ -#if defined (H5_HAVE_FILTER_SHUFFLE) + /* remove the filters from the dcpl */ ret = H5Premove_filter(dcpl,H5Z_FILTER_ALL); HDassert(ret >= 0); @@ -5444,14 +5444,13 @@ static void gent_filters(void) ret=make_dset(fid,"shuffle",sid,H5T_NATIVE_INT,dcpl,buf1); HDassert(ret >= 0); -#endif /*------------------------------------------------------------------------- * checksum *------------------------------------------------------------------------- */ -#if defined (H5_HAVE_FILTER_FLETCHER32) + /* remove the filters from the dcpl */ ret = H5Premove_filter(dcpl,H5Z_FILTER_ALL); HDassert(ret >= 0); @@ -5462,13 +5461,12 @@ static void gent_filters(void) ret=make_dset(fid,"fletcher32",sid,H5T_NATIVE_INT,dcpl,buf1); HDassert(ret >= 0); -#endif /*------------------------------------------------------------------------- * nbit *------------------------------------------------------------------------- */ -#if defined (H5_HAVE_FILTER_NBIT) + /* remove the filters from the dcpl */ ret = H5Premove_filter(dcpl,H5Z_FILTER_ALL); HDassert(ret >= 0); @@ -5481,13 +5479,12 @@ static void gent_filters(void) H5Tset_precision(tid,H5Tget_size(tid)-1); ret=make_dset(fid,"nbit",sid,tid,dcpl,buf1); HDassert(ret >= 0); -#endif /*------------------------------------------------------------------------- * scaleoffset *------------------------------------------------------------------------- */ -#if defined (H5_HAVE_FILTER_SCALEOFFSET) + /* remove the filters from the dcpl */ ret = H5Premove_filter(dcpl,H5Z_FILTER_ALL); HDassert(ret >= 0); @@ -5498,7 +5495,6 @@ static void gent_filters(void) ret=make_dset(fid,"scaleoffset",sid,H5T_NATIVE_INT,dcpl,buf1); HDassert(ret >= 0); -#endif /*------------------------------------------------------------------------- * all filters @@ -5508,11 +5504,9 @@ static void gent_filters(void) ret = H5Premove_filter(dcpl,H5Z_FILTER_ALL); HDassert(ret >= 0); -#if defined (H5_HAVE_FILTER_SHUFFLE) /* set the shuffle filter */ ret = H5Pset_shuffle(dcpl); HDassert(ret >= 0); -#endif #ifdef H5_HAVE_FILTER_SZIP if(h5tools_can_encode(H5Z_FILTER_SZIP) == 1) { @@ -5529,17 +5523,13 @@ static void gent_filters(void) HDassert(ret >= 0); #endif -#if defined (H5_HAVE_FILTER_FLETCHER32) /* set the checksum filter */ ret = H5Pset_fletcher32(dcpl); HDassert(ret >= 0); -#endif -#if defined (H5_HAVE_FILTER_NBIT) /* set the nbit filter */ ret = H5Pset_nbit(dcpl); HDassert(ret >= 0); -#endif ret=make_dset(fid,"all",sid,H5T_NATIVE_INT,dcpl,buf1); HDassert(ret >= 0); @@ -6883,7 +6873,7 @@ gent_fpformat(void) { hid_t fid, sid, did; hsize_t dims[1] = {6}; - double dbuf[6] = {-0.1234567, 0.1234567, 0, 0, 0, 0}; + double dbuf[6] = {-0.1234567f, 0.1234567f, 0, 0, 0, 0}; float fbuf[6] = {-0.1234567f, 0.1234567f, 0, 0, 0, 0}; fid = H5Fcreate(FILE60, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); @@ -7203,7 +7193,7 @@ gent_packedbits(void) for(i = 0; i < dims[0]; i++) for(j = 0; j < dims[1]; j++) - dsetdbl[i][j] = 0.0001 * j + i; + dsetdbl[i][j] = 0.0001F * j + i; H5Dwrite(dataset, H5T_NATIVE_DOUBLE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetdbl); @@ -7393,7 +7383,7 @@ gent_attr_intsize(void) for(i = 0; i < dims[0]; i++) for(j = 0; j < dims[1]; j++) - dsetdbl[i][j] = 0.0001 * j + i; + dsetdbl[i][j] = 0.0001F * j + i; H5Awrite(attr, H5T_NATIVE_DOUBLE, dsetdbl); @@ -7601,7 +7591,7 @@ static void gent_compound_intsizes(void) { for(n = 0; n < dims[0]; n++) for(o = 0; o < dims[1]; o++) - Array1[m].dsetdbl[n][o] = 0.0001 * o + n; + Array1[m].dsetdbl[n][o] = 0.0001F * o + n; } /* Create the array data type for the 8 bits signed int array */ @@ -7876,7 +7866,7 @@ static void gent_compound_attr_intsizes(void) { for(n = 0; n < dims[0]; n++) for(o = 0; o < dims[1]; o++) - Array1[m].dsetdbl[n][o] = 0.0001 * o + n; + Array1[m].dsetdbl[n][o] = 0.0001F * o + n; } /* Create the array data type for the 8 bits signed int array */ @@ -8044,17 +8034,17 @@ static void gent_nested_compound_dt(void) { /* test nested data type */ dset1[i].b = (float)(i*i); dset2[i].a = i; - dset2[i].b = (float)(i+i*0.1); + dset2[i].b = (float)(i+i*0.1F); dset2[i].c = GREEN; for(j = 0; j < 5; j++) { dset3[i].a[j] = i*j; for(k = 0; k < 6; k++) { - dset3[i].b[j][k] = (float)(i*j*k*1.0); + dset3[i].b[j][k] = (float)(i*j*k*1.0F); } } dset3[i].c.a = i; - dset3[i].c.b = (float)(i*1.0); + dset3[i].c.b = (float)(i*1.0F); } fid = H5Fcreate(FILE72, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); @@ -8342,7 +8332,7 @@ gent_intscalars(void) for(i = 0; i < dims[0]; i++) for(j = 0; j < dims[1]; j++) - dsetdbl[i][j] = 0.0001 * j + i; + dsetdbl[i][j] = 0.0001F * j + i; H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetdbl); @@ -8541,7 +8531,7 @@ gent_attr_intscalars(void) for(i = 0; i < dims[0]; i++) for(j = 0; j < dims[1]; j++) - dsetdbl[i][j] = 0.0001 * j + i; + dsetdbl[i][j] = 0.0001F * j + i; H5Awrite(attr, tid, dsetdbl); @@ -8727,7 +8717,7 @@ static void gent_compound_int_array(void) { dims[0] = F76_DIM8; for(n = 0; n < dims[0]; n++) - Cmpd1[m].dsetdbl[n] = 0.0001 + n; + Cmpd1[m].dsetdbl[n] = 0.0001F + n; } /* Create the array data type for the 8 bits signed int array */ @@ -8958,8 +8948,8 @@ static void gent_compound_ints(void) { val64bits <<= 1; /* Double Dummy set for failure tests */ - Cmpd1[m].dsetdbl = 0.0001 + m; - Cmpd2[m].dsetdbl = 0.0001 + m; + Cmpd1[m].dsetdbl = 0.0001F + m; + Cmpd2[m].dsetdbl = 0.0001F + m; } /* Create the dataspace */ @@ -9296,7 +9286,7 @@ gent_intattrscalars(void) for(i = 0; i < dims[0]; i++) for(j = 0; j < dims[1]; j++) - dsetdbl[i][j] = 0.0001 * j + i; + dsetdbl[i][j] = 0.0001F * j + i; H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetdbl); /* Attribute of double */ @@ -9561,7 +9551,7 @@ gent_intsattrs(void) for(i = 0; i < dims[0]; i++) for(j = 0; j < dims[1]; j++) { - dsetdbl[i][j] = 0.0001 * j + i; + dsetdbl[i][j] = 0.0001F * j + i; asetdbl[i*dims[1]+j] = dsetdbl[i][j]; } diff --git a/tools/h5dump/testh5dump.sh.in b/tools/h5dump/testh5dump.sh.in index 0c72a8d..95f8091 100644 --- a/tools/h5dump/testh5dump.sh.in +++ b/tools/h5dump/testh5dump.sh.in @@ -19,10 +19,6 @@ srcdir=@srcdir@ USE_FILTER_SZIP="@USE_FILTER_SZIP@" USE_FILTER_DEFLATE="@USE_FILTER_DEFLATE@" -USE_FILTER_SHUFFLE="@USE_FILTER_SHUFFLE@" -USE_FILTER_FLETCHER32="@USE_FILTER_FLETCHER32@" -USE_FILTER_NBIT="@USE_FILTER_NBIT@" -USE_FILTER_SCALEOFFSET="@USE_FILTER_SCALEOFFSET@" TESTNAME=h5dump EXIT_SUCCESS=0 @@ -440,8 +436,21 @@ TESTING() { # the actual output file is calculated by replacing the `.ddl' with # `.out'. The actual output is not removed if $HDF5_NOCLEANUP has a # non-zero value. +# If $1 == ignorecase then do caseless CMP and DIFF. # ADD_H5_TEST TOOLTEST() { + # check if caseless compare and diff requested + if [ "$1" = ignorecase ]; then + caseless="-i" + # replace cmp with diff which runs much longer. + xCMP="$DIFF -i" + shift + else + caseless="" + # stick with faster cmp if ignorecase is not requested. + xCMP="$CMP" + fi + expect="$TESTDIR/$1" actual="$TESTDIR/`basename $1 .ddl`.out" actual_err="$TESTDIR/`basename $1 .ddl`.err" @@ -467,13 +476,13 @@ TOOLTEST() { # Create the expect file if it doesn't yet exist. echo " CREATED" cp $actual $expect - elif $CMP $expect $actual; then + elif $xCMP $expect $actual > /dev/null 2>&1 ; then echo " PASSED" else echo "*FAILED*" echo " Expected result (*.ddl) differs from actual result (*.out)" nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + test yes = "$verbose" && $DIFF $caseless $expect $actual |sed 's/^/ /' fi # Clean up output file @@ -1184,7 +1193,7 @@ TOOLTEST tallfilters.ddl --enable-error-stack -H -p -d all tfilters.h5 # user defined TOOLTEST tuserfilter.ddl --enable-error-stack -H -p -d myfilter tfilters.h5 -if test $USE_FILTER_DEFLATE = "yes" -a $USE_FILTER_SHUFFLE = "yes" -a $USE_FILTER_FLETCHER32 = "yes" -a $USE_FILTER_NBIT = "yes" -a $USE_FILTER_SCALEOFFSET = "yes" ; then +if test $USE_FILTER_DEFLATE = "yes" ; then # data read internal filters TOOLTEST treadintfilter.ddl --enable-error-stack -d deflate -d shuffle -d fletcher32 -d nbit -d scaleoffset tfilters.h5 if test $USE_FILTER_SZIP = "yes"; then diff --git a/tools/h5dump/testh5dumppbits.sh.in b/tools/h5dump/testh5dumppbits.sh.in index 0f6503d..6556ff5 100644 --- a/tools/h5dump/testh5dumppbits.sh.in +++ b/tools/h5dump/testh5dumppbits.sh.in @@ -20,10 +20,6 @@ srcdir=@srcdir@ # Determine which filters are available USE_FILTER_SZIP="@USE_FILTER_SZIP@" USE_FILTER_DEFLATE="@USE_FILTER_DEFLATE@" -USE_FILTER_SHUFFLE="@USE_FILTER_SHUFFLE@" -USE_FILTER_FLETCHER32="@USE_FILTER_FLETCHER32@" -USE_FILTER_NBIT="@USE_FILTER_NBIT@" -USE_FILTER_SCALEOFFSET="@USE_FILTER_SCALEOFFSET@" TESTNAME=h5dump EXIT_SUCCESS=0 diff --git a/tools/h5dump/testh5dumpxml.sh.in b/tools/h5dump/testh5dumpxml.sh.in index 4dad9cd..1efde85 100644 --- a/tools/h5dump/testh5dumpxml.sh.in +++ b/tools/h5dump/testh5dumpxml.sh.in @@ -21,8 +21,6 @@ TESTNAME=h5dumpxml EXIT_SUCCESS=0 EXIT_FAILURE=1 -H5_LONE_COLON="@H5_LONE_COLON@" - DUMPER=h5dump # The tool name DUMPER_BIN=`pwd`/$DUMPER # The path of the tool binary @@ -356,15 +354,7 @@ TOOLTEST tnamed_dtype_attr.h5.xml --xml tnamed_dtype_attr.h5 TOOLTEST tempty-dtd.h5.xml --xml --use-dtd tempty.h5 TOOLTEST tempty-dtd-2.h5.xml --xml -u tempty.h5 - -# The lone colon here confuses some systems (Cray X1). Skip -# it if configure detects that this is a problem. -if test "X$H5_LONE_COLON" != "Xno"; then - TOOLTEST tempty-nons.h5.xml --xml -X ":" tempty.h5 -else - SKIP tempty-nons.h5.xml --xml -X ":" tempty.h5 -fi - +TOOLTEST tempty-nons.h5.xml --xml -X ":" tempty.h5 TOOLTEST tempty-nons-2.h5.xml --xml --xml-ns=":" tempty.h5 ## Some of these combinations are syntactically correct but diff --git a/tools/h5import/CMakeLists.txt b/tools/h5import/CMakeLists.txt index 2ba2b78..bf1515e 100644 --- a/tools/h5import/CMakeLists.txt +++ b/tools/h5import/CMakeLists.txt @@ -11,7 +11,7 @@ INCLUDE_DIRECTORIES (${HDF5_TOOLS_SRC_DIR}/lib) # -------------------------------------------------------------------- add_executable (h5import ${HDF5_TOOLS_H5IMPORT_SOURCE_DIR}/h5import.c) TARGET_NAMING (h5import ${LIB_TYPE}) -TARGET_C_PROPERTIES (h5import " " " ") +TARGET_C_PROPERTIES (h5import ${LIB_TYPE} " " " ") target_link_libraries (h5import ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) #set_target_properties (h5import PROPERTIES COMPILE_DEFINITIONS H5DEBUGIMPORT) set_target_properties (h5import PROPERTIES FOLDER tools) @@ -24,7 +24,7 @@ if (BUILD_TESTING) # -------------------------------------------------------------------- add_executable (h5importtest ${HDF5_TOOLS_H5IMPORT_SOURCE_DIR}/h5importtest.c) TARGET_NAMING (h5importtest ${LIB_TYPE}) - TARGET_C_PROPERTIES (h5importtest " " " ") + TARGET_C_PROPERTIES (h5importtest ${LIB_TYPE} " " " ") target_link_libraries (h5importtest ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET}) set_target_properties (h5importtest PROPERTIES FOLDER tools) diff --git a/tools/h5import/Makefile.in b/tools/h5import/Makefile.in index ed26aab..0778fc2 100644 --- a/tools/h5import/Makefile.in +++ b/tools/h5import/Makefile.in @@ -414,7 +414,6 @@ AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@ AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@ AM_MAKEFLAGS = @AM_MAKEFLAGS@ AR = @AR@ -AS = @AS@ AUTOCONF = @AUTOCONF@ AUTOHEADER = @AUTOHEADER@ AUTOMAKE = @AUTOMAKE@ @@ -446,7 +445,6 @@ DIRECT_VFD = @DIRECT_VFD@ DLLTOOL = @DLLTOOL@ DSYMUTIL = @DSYMUTIL@ DUMPBIN = @DUMPBIN@ -DYNAMIC_DIRS = @DYNAMIC_DIRS@ ECHO_C = @ECHO_C@ ECHO_N = @ECHO_N@ ECHO_T = @ECHO_T@ @@ -465,17 +463,14 @@ FCFLAGS_f90 = @FCFLAGS_f90@ FCLIBS = @FCLIBS@ FC_VERSION = @FC_VERSION@ FGREP = @FGREP@ -FILTERS = @FILTERS@ FSEARCH_DIRS = @FSEARCH_DIRS@ GREP = @GREP@ H5_CFLAGS = @H5_CFLAGS@ H5_CPPFLAGS = @H5_CPPFLAGS@ H5_CXXFLAGS = @H5_CXXFLAGS@ -H5_CXX_SHARED = @H5_CXX_SHARED@ H5_FCFLAGS = @H5_FCFLAGS@ H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@ H5_LDFLAGS = @H5_LDFLAGS@ -H5_LONE_COLON = @H5_LONE_COLON@ H5_VERSION = @H5_VERSION@ HADDR_T = @HADDR_T@ HAVE_DMALLOC = @HAVE_DMALLOC@ @@ -538,7 +533,6 @@ R_INTEGER = @R_INTEGER@ R_LARGE = @R_LARGE@ SEARCH = @SEARCH@ SED = @SED@ -SETX = @SETX@ SET_MAKE = @SET_MAKE@ SHELL = @SHELL@ SIZE_T = @SIZE_T@ @@ -553,10 +547,6 @@ TR = @TR@ TRACE_API = @TRACE_API@ UNAME_INFO = @UNAME_INFO@ USE_FILTER_DEFLATE = @USE_FILTER_DEFLATE@ -USE_FILTER_FLETCHER32 = @USE_FILTER_FLETCHER32@ -USE_FILTER_NBIT = @USE_FILTER_NBIT@ -USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@ -USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@ USE_FILTER_SZIP = @USE_FILTER_SZIP@ USINGMEMCHECKER = @USINGMEMCHECKER@ VERSION = @VERSION@ diff --git a/tools/h5import/h5importtest.c b/tools/h5import/h5importtest.c index 49f977c..ac839fb 100644 --- a/tools/h5import/h5importtest.c +++ b/tools/h5import/h5importtest.c @@ -40,13 +40,13 @@ main(void) FILE *sp; float row4[3], col4[4], pln4[5]; - float rowo4 = (float)11.0e0, colo4 = (float)21.0e0, plno4 = (float)51.0e0; - float rowi4 = (float)1.0e0, coli4 = (float)2.0e0, plni4 = (float)5.0e0; + float rowo4 = 11.0F, colo4 = 21.0F, plno4 = 51.0F; + float rowi4 = 1.0F, coli4 = 2.0F, plni4 = 5.0F; int b32i3[5][3][4]; int row4i[3], col4i[4], pln4i[5]; - int rowo4i = (int)11 , colo4i = (int)21 , plno4i = (int)51 ; - int rowi4i = (int)1 , coli4i = (int)2 , plni4i = (int)5 ; + int rowo4i = 11 , colo4i = 21 , plno4i = 51 ; + int rowi4i = 1 , coli4i = 2 , plni4i = 5 ; #ifdef H5_SIZEOF_LONG_LONG long long row4i64[3], col4i64[4], pln4i64[5]; @@ -66,8 +66,8 @@ main(void) double b64r3[5][3][4]; double row8[3], col8[4], pln8[5]; - double rowo8 = 11.0e0, colo8 = 21.0e0, plno8 = 51.0e0; - double rowi8 = 1.0e0, coli8 = 2.0e0, plni8 = 5.0e0; + double rowo8 = 11.0F, colo8 = 21.0F, plno8 = 51.0F; + double rowi8 = 1.0F, coli8 = 2.0F, plni8 = 5.0F; /* diff --git a/tools/h5jam/CMakeLists.txt b/tools/h5jam/CMakeLists.txt index 412a2f0..4498132 100644 --- a/tools/h5jam/CMakeLists.txt +++ b/tools/h5jam/CMakeLists.txt @@ -11,25 +11,25 @@ INCLUDE_DIRECTORIES (${HDF5_TOOLS_SRC_DIR}/lib) # -------------------------------------------------------------------- add_executable (h5jam ${HDF5_TOOLS_H5JAM_SOURCE_DIR}/h5jam.c) TARGET_NAMING (h5jam ${LIB_TYPE}) -TARGET_C_PROPERTIES (h5jam " " " ") +TARGET_C_PROPERTIES (h5jam ${LIB_TYPE} " " " ") target_link_libraries (h5jam ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) set_target_properties (h5jam PROPERTIES FOLDER tools) add_executable (getub ${HDF5_TOOLS_H5JAM_SOURCE_DIR}/getub.c) TARGET_NAMING (getub ${LIB_TYPE}) -TARGET_C_PROPERTIES (getub " " " ") +TARGET_C_PROPERTIES (getub ${LIB_TYPE} " " " ") target_link_libraries (getub ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) set_target_properties (getub PROPERTIES FOLDER tools) add_executable (tellub ${HDF5_TOOLS_H5JAM_SOURCE_DIR}/tellub.c) TARGET_NAMING (tellub ${LIB_TYPE}) -TARGET_C_PROPERTIES (tellub " " " ") +TARGET_C_PROPERTIES (tellub ${LIB_TYPE} " " " ") target_link_libraries (tellub ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) set_target_properties (tellub PROPERTIES FOLDER tools) add_executable (h5unjam ${HDF5_TOOLS_H5JAM_SOURCE_DIR}/h5unjam.c) TARGET_NAMING (h5unjam ${LIB_TYPE}) -TARGET_C_PROPERTIES (h5unjam " " " ") +TARGET_C_PROPERTIES (h5unjam ${LIB_TYPE} " " " ") target_link_libraries (h5unjam ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) set_target_properties (h5unjam PROPERTIES FOLDER tools) @@ -47,7 +47,7 @@ if (BUILD_TESTING) if (HDF5_BUILD_GENERATORS AND NOT BUILD_SHARED_LIBS) add_executable (h5jamgentest ${HDF5_TOOLS_H5JAM_SOURCE_DIR}/h5jamgentest.c) TARGET_NAMING (h5jamgentest ${LIB_TYPE}) - TARGET_C_PROPERTIES (testhdf5 " " " ") + TARGET_C_PROPERTIES (testhdf5 ${LIB_TYPE} " " " ") target_link_libraries (h5jamgentest ${HDF5_LIB_TARGET}) set_target_properties (h5jamgentest PROPERTIES FOLDER generator/tools) diff --git a/tools/h5jam/Makefile.in b/tools/h5jam/Makefile.in index 855b708..ed8151f 100644 --- a/tools/h5jam/Makefile.in +++ b/tools/h5jam/Makefile.in @@ -426,7 +426,6 @@ AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@ AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@ AM_MAKEFLAGS = @AM_MAKEFLAGS@ AR = @AR@ -AS = @AS@ AUTOCONF = @AUTOCONF@ AUTOHEADER = @AUTOHEADER@ AUTOMAKE = @AUTOMAKE@ @@ -458,7 +457,6 @@ DIRECT_VFD = @DIRECT_VFD@ DLLTOOL = @DLLTOOL@ DSYMUTIL = @DSYMUTIL@ DUMPBIN = @DUMPBIN@ -DYNAMIC_DIRS = @DYNAMIC_DIRS@ ECHO_C = @ECHO_C@ ECHO_N = @ECHO_N@ ECHO_T = @ECHO_T@ @@ -477,17 +475,14 @@ FCFLAGS_f90 = @FCFLAGS_f90@ FCLIBS = @FCLIBS@ FC_VERSION = @FC_VERSION@ FGREP = @FGREP@ -FILTERS = @FILTERS@ FSEARCH_DIRS = @FSEARCH_DIRS@ GREP = @GREP@ H5_CFLAGS = @H5_CFLAGS@ H5_CPPFLAGS = @H5_CPPFLAGS@ H5_CXXFLAGS = @H5_CXXFLAGS@ -H5_CXX_SHARED = @H5_CXX_SHARED@ H5_FCFLAGS = @H5_FCFLAGS@ H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@ H5_LDFLAGS = @H5_LDFLAGS@ -H5_LONE_COLON = @H5_LONE_COLON@ H5_VERSION = @H5_VERSION@ HADDR_T = @HADDR_T@ HAVE_DMALLOC = @HAVE_DMALLOC@ @@ -550,7 +545,6 @@ R_INTEGER = @R_INTEGER@ R_LARGE = @R_LARGE@ SEARCH = @SEARCH@ SED = @SED@ -SETX = @SETX@ SET_MAKE = @SET_MAKE@ SHELL = @SHELL@ SIZE_T = @SIZE_T@ @@ -565,10 +559,6 @@ TR = @TR@ TRACE_API = @TRACE_API@ UNAME_INFO = @UNAME_INFO@ USE_FILTER_DEFLATE = @USE_FILTER_DEFLATE@ -USE_FILTER_FLETCHER32 = @USE_FILTER_FLETCHER32@ -USE_FILTER_NBIT = @USE_FILTER_NBIT@ -USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@ -USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@ USE_FILTER_SZIP = @USE_FILTER_SZIP@ USINGMEMCHECKER = @USINGMEMCHECKER@ VERSION = @VERSION@ diff --git a/tools/h5jam/h5jamgentest.c b/tools/h5jam/h5jamgentest.c index 9636597..5a93c13 100644 --- a/tools/h5jam/h5jamgentest.c +++ b/tools/h5jam/h5jamgentest.c @@ -254,7 +254,7 @@ gent_ub(const char * filename, size_t ub_size, size_t ub_fill) space = H5Screate_simple(1, dims, NULL); dataset = H5Dcreate2(group, "dset2.1", H5T_IEEE_F32BE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); for (i = 0; i < 10; i++) - dset2_1[i] = (float)(i*0.1+1); + dset2_1[i] = (float)(i*0.1F+1); H5Dwrite(dataset, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset2_1); H5Sclose(space); H5Dclose(dataset); @@ -265,7 +265,7 @@ gent_ub(const char * filename, size_t ub_size, size_t ub_fill) dataset = H5Dcreate2(group, "dset2.2", H5T_IEEE_F32BE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); for (i = 0; i < 3; i++) for (j = 0; j < 5; j++) - dset2_2[i][j] = (float)((i+1)*j*0.1); + dset2_2[i][j] = (float)((i+1)*j*0.1F); H5Dwrite(dataset, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset2_2); H5Sclose(space); H5Dclose(dataset); diff --git a/tools/h5jam/testh5jam.sh.in b/tools/h5jam/testh5jam.sh.in index 36f0657..1664d6b 100644 --- a/tools/h5jam/testh5jam.sh.in +++ b/tools/h5jam/testh5jam.sh.in @@ -20,8 +20,6 @@ srcdir=@srcdir@ # Determine which filters are available USE_FILTER_SZIP="@USE_FILTER_SZIP@" USE_FILTER_DEFLATE="@USE_FILTER_DEFLATE@" -USE_FILTER_SHUFFLE="@USE_FILTER_SHUFFLE@" -USE_FILTER_FLETCHER32="@USE_FILTER_FLETCHER32@" TESTNAME=h5jam/h5unjam EXIT_SUCCESS=0 diff --git a/tools/h5ls/CMakeLists.txt b/tools/h5ls/CMakeLists.txt index 0d163ce..984b36b 100644 --- a/tools/h5ls/CMakeLists.txt +++ b/tools/h5ls/CMakeLists.txt @@ -11,7 +11,7 @@ INCLUDE_DIRECTORIES (${HDF5_TOOLS_SRC_DIR}/lib) #----------------------------------------------------------------------------- add_executable (h5ls ${HDF5_TOOLS_H5LS_SOURCE_DIR}/h5ls.c) TARGET_NAMING (h5ls ${LIB_TYPE}) -TARGET_C_PROPERTIES (h5ls " " " ") +TARGET_C_PROPERTIES (h5ls ${LIB_TYPE} " " " ") target_link_libraries (h5ls ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) set_target_properties (h5ls PROPERTIES FOLDER tools) diff --git a/tools/h5ls/Makefile.in b/tools/h5ls/Makefile.in index 0a33e29..c77784e 100644 --- a/tools/h5ls/Makefile.in +++ b/tools/h5ls/Makefile.in @@ -406,7 +406,6 @@ AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@ AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@ AM_MAKEFLAGS = @AM_MAKEFLAGS@ AR = @AR@ -AS = @AS@ AUTOCONF = @AUTOCONF@ AUTOHEADER = @AUTOHEADER@ AUTOMAKE = @AUTOMAKE@ @@ -438,7 +437,6 @@ DIRECT_VFD = @DIRECT_VFD@ DLLTOOL = @DLLTOOL@ DSYMUTIL = @DSYMUTIL@ DUMPBIN = @DUMPBIN@ -DYNAMIC_DIRS = @DYNAMIC_DIRS@ ECHO_C = @ECHO_C@ ECHO_N = @ECHO_N@ ECHO_T = @ECHO_T@ @@ -457,17 +455,14 @@ FCFLAGS_f90 = @FCFLAGS_f90@ FCLIBS = @FCLIBS@ FC_VERSION = @FC_VERSION@ FGREP = @FGREP@ -FILTERS = @FILTERS@ FSEARCH_DIRS = @FSEARCH_DIRS@ GREP = @GREP@ H5_CFLAGS = @H5_CFLAGS@ H5_CPPFLAGS = @H5_CPPFLAGS@ H5_CXXFLAGS = @H5_CXXFLAGS@ -H5_CXX_SHARED = @H5_CXX_SHARED@ H5_FCFLAGS = @H5_FCFLAGS@ H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@ H5_LDFLAGS = @H5_LDFLAGS@ -H5_LONE_COLON = @H5_LONE_COLON@ H5_VERSION = @H5_VERSION@ HADDR_T = @HADDR_T@ HAVE_DMALLOC = @HAVE_DMALLOC@ @@ -530,7 +525,6 @@ R_INTEGER = @R_INTEGER@ R_LARGE = @R_LARGE@ SEARCH = @SEARCH@ SED = @SED@ -SETX = @SETX@ SET_MAKE = @SET_MAKE@ SHELL = @SHELL@ SIZE_T = @SIZE_T@ @@ -545,10 +539,6 @@ TR = @TR@ TRACE_API = @TRACE_API@ UNAME_INFO = @UNAME_INFO@ USE_FILTER_DEFLATE = @USE_FILTER_DEFLATE@ -USE_FILTER_FLETCHER32 = @USE_FILTER_FLETCHER32@ -USE_FILTER_NBIT = @USE_FILTER_NBIT@ -USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@ -USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@ USE_FILTER_SZIP = @USE_FILTER_SZIP@ USINGMEMCHECKER = @USINGMEMCHECKER@ VERSION = @VERSION@ diff --git a/tools/h5repack/CMakeLists.txt b/tools/h5repack/CMakeLists.txt index f6c3050..42d9f3d 100644 --- a/tools/h5repack/CMakeLists.txt +++ b/tools/h5repack/CMakeLists.txt @@ -22,7 +22,7 @@ set (REPACK_COMMON_SRCS add_executable (h5repack ${REPACK_COMMON_SRCS} ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/h5repack_main.c) TARGET_NAMING (h5repack ${LIB_TYPE}) -TARGET_C_PROPERTIES (h5repack " " " ") +TARGET_C_PROPERTIES (h5repack ${LIB_TYPE} " " " ") target_link_libraries (h5repack ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) set_target_properties (h5repack PROPERTIES FOLDER tools) @@ -34,13 +34,13 @@ if (BUILD_TESTING) # -------------------------------------------------------------------- add_executable (testh5repack_detect_szip ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testh5repack_detect_szip.c) TARGET_NAMING (testh5repack_detect_szip ${LIB_TYPE}) - TARGET_C_PROPERTIES (testh5repack_detect_szip " " " ") + TARGET_C_PROPERTIES (testh5repack_detect_szip ${LIB_TYPE} " " " ") target_link_libraries (testh5repack_detect_szip ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET}) set_target_properties (testh5repack_detect_szip PROPERTIES FOLDER tools) add_executable (h5repacktest ${REPACK_COMMON_SRCS} ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/h5repacktst.c) TARGET_NAMING (h5repacktest ${LIB_TYPE}) - TARGET_C_PROPERTIES (h5repacktest " " " ") + TARGET_C_PROPERTIES (h5repacktest ${LIB_TYPE} " " " ") target_link_libraries (h5repacktest ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET}) set_target_properties (h5repacktest PROPERTIES FOLDER tools) @@ -54,12 +54,12 @@ if (BUILD_TESTING) add_definitions (${HDF_EXTRA_C_FLAGS}) INCLUDE_DIRECTORIES (${HDF5_SRC_DIR}) - add_library (${HDF5_TOOL_PLUGIN_LIB_TARGET} ${LIB_TYPE} dynlib_rpk.c) - TARGET_C_PROPERTIES (${HDF5_TOOL_PLUGIN_LIB_TARGET} " " " ") + add_library (${HDF5_TOOL_PLUGIN_LIB_TARGET} SHARED dynlib_rpk.c) + TARGET_C_PROPERTIES (${HDF5_TOOL_PLUGIN_LIB_TARGET} SHARED " " " ") target_link_libraries (${HDF5_TOOL_PLUGIN_LIB_TARGET} ${HDF5_TEST_LIB_TARGET}) H5_SET_LIB_OPTIONS ( ${HDF5_TOOL_PLUGIN_LIB_TARGET} ${HDF5_TOOL_PLUGIN_LIB_NAME} - ${LIB_TYPE} + SHARED HDF5_TOOL_PLUGIN_LIB_NAME_RELEASE HDF5_TOOL_PLUGIN_LIB_NAME_DEBUG ) diff --git a/tools/h5repack/CMakeTests.cmake b/tools/h5repack/CMakeTests.cmake index 220c871..3391c3f 100644 --- a/tools/h5repack/CMakeTests.cmake +++ b/tools/h5repack/CMakeTests.cmake @@ -649,22 +649,6 @@ set (USE_FILTER_SZIP "true") endif (H5_HAVE_FILTER_SZIP) - if (H5_HAVE_FILTER_SHUFFLE) - set (USE_FILTER_SHUFFLE "true") - endif (H5_HAVE_FILTER_SHUFFLE) - - if (H5_HAVE_FILTER_FLETCHER32) - set (USE_FILTER_FLETCHER32 "true") - endif (H5_HAVE_FILTER_FLETCHER32) - - if (H5_HAVE_FILTER_NBIT) - set (USE_FILTER_NBIT "true") - endif (H5_HAVE_FILTER_NBIT) - - if (H5_HAVE_FILTER_SCALEOFFSET) - set (USE_FILTER_SCALEOFFSET "true") - endif (H5_HAVE_FILTER_SCALEOFFSET) - # copy files (these files have no filters) ADD_H5_TEST (fill "TEST" ${FILE0}) ADD_H5_TEST (objs "TEST" ${FILE1}) @@ -709,42 +693,26 @@ # shuffle with individual object set (arg ${FILE4} -f dset2:SHUF -l dset2:CHUNK=20x10) - set (TESTTYPE "TEST") - if (NOT USE_FILTER_SHUFFLE) - set (TESTTYPE "SKIP") - endif (NOT USE_FILTER_SHUFFLE) - ADD_H5_TEST (shuffle_individual ${TESTTYPE} ${arg}) + ADD_H5_TEST (shuffle_individual "TEST" ${arg}) # shuffle for all set (arg ${FILE4} -f SHUF) - set (TESTTYPE "TEST") - if (NOT USE_FILTER_SHUFFLE) - set (TESTTYPE "SKIP") - endif (NOT USE_FILTER_SHUFFLE) - ADD_H5_TEST (shuffle_all ${TESTTYPE} ${arg}) + ADD_H5_TEST (shuffle_all "TEST" ${arg}) # fletcher32 with individual object set (arg ${FILE4} -f dset2:FLET -l dset2:CHUNK=20x10) - set (TESTTYPE "TEST") - if (NOT USE_FILTER_FLETCHER32) - set (TESTTYPE "SKIP") - endif (NOT USE_FILTER_FLETCHER32) - ADD_H5_TEST (fletcher_individual ${TESTTYPE} ${arg}) + ADD_H5_TEST (fletcher_individual "TEST" ${arg}) # fletcher32 for all set (arg ${FILE4} -f FLET) - set (TESTTYPE "TEST") - if (NOT USE_FILTER_FLETCHER32) - set (TESTTYPE "SKIP") - endif (NOT USE_FILTER_FLETCHER32) - ADD_H5_TEST (fletcher_all ${TESTTYPE} ${arg}) + ADD_H5_TEST (fletcher_all "TEST" ${arg}) # all filters set (arg ${FILE4} -f dset2:SHUF -f dset2:FLET -f dset2:SZIP=8,NN -f dset2:GZIP=1 -l dset2:CHUNK=20x10) set (TESTTYPE "TEST") - if (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_SHUFFLE OR NOT USE_FILTER_FLETCHER32 OR NOT USE_FILTER_DEFLATE) + if (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_DEFLATE) set (TESTTYPE "SKIP") - endif (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_SHUFFLE OR NOT USE_FILTER_FLETCHER32 OR NOT USE_FILTER_DEFLATE) + endif (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_DEFLATE) ADD_H5_TEST (all_filters ${TESTTYPE} ${arg}) # verbose gzip with individual object @@ -793,90 +761,50 @@ # shuffle copy set (arg ${FILE9}) - set (TESTTYPE "TEST") - if (NOT USE_FILTER_SHUFFLE) - set (TESTTYPE "SKIP") - endif (NOT USE_FILTER_SHUFFLE) - ADD_H5_TEST (shuffle_copy ${TESTTYPE} ${arg}) + ADD_H5_TEST (shuffle_copy "TEST" ${arg}) # shuffle remove set (arg ${FILE9} -f dset_shuffle:NONE) - set (TESTTYPE "TEST") - if (NOT USE_FILTER_SHUFFLE) - set (TESTTYPE "SKIP") - endif (NOT USE_FILTER_SHUFFLE) - ADD_H5_TEST (shuffle_remove ${TESTTYPE} ${arg}) + ADD_H5_TEST (shuffle_remove "TEST" ${arg}) # fletcher32 copy set (arg ${FILE10}) - set (TESTTYPE "TEST") - if (NOT USE_FILTER_FLETCHER32) - set (TESTTYPE "SKIP") - endif (NOT USE_FILTER_FLETCHER32) - ADD_H5_TEST (fletcher_copy ${TESTTYPE} ${arg}) + ADD_H5_TEST (fletcher_copy "TEST" ${arg}) # fletcher32 remove set (arg ${FILE10} -f dset_fletcher32:NONE) - set (TESTTYPE "TEST") - if (NOT USE_FILTER_FLETCHER32) - set (TESTTYPE "SKIP") - endif (NOT USE_FILTER_FLETCHER32) - ADD_H5_TEST (fletcher_remove ${TESTTYPE} ${arg}) + ADD_H5_TEST (fletcher_remove "TEST" ${arg}) # nbit copy set (arg ${FILE12}) - set (TESTTYPE "TEST") - if (NOT USE_FILTER_NBIT) - set (TESTTYPE "SKIP") - endif (NOT USE_FILTER_NBIT) - ADD_H5_TEST (nbit_copy ${TESTTYPE} ${arg}) + ADD_H5_TEST (nbit_copy "TEST" ${arg}) # nbit remove set (arg ${FILE12} -f dset_nbit:NONE) - set (TESTTYPE "TEST") - if (NOT USE_FILTER_NBIT) - set (TESTTYPE "SKIP") - endif (NOT USE_FILTER_NBIT) - ADD_H5_TEST (nbit_remove ${TESTTYPE} ${arg}) + ADD_H5_TEST (nbit_remove "TEST" ${arg}) # nbit add set (arg ${FILE12} -f dset_int31:NBIT) - set (TESTTYPE "TEST") - if (NOT USE_FILTER_NBIT) - set (TESTTYPE "SKIP") - endif (NOT USE_FILTER_NBIT) - ADD_H5_TEST (nbit_add ${TESTTYPE} ${arg}) + ADD_H5_TEST (nbit_add "TEST" ${arg}) # scaleoffset copy set (arg ${FILE13}) - set (TESTTYPE "TEST") - if (NOT USE_FILTER_SCALEOFFSET) - set (TESTTYPE "SKIP") - endif (NOT USE_FILTER_SCALEOFFSET) - ADD_H5_TEST (scale_copy ${TESTTYPE} ${arg}) + ADD_H5_TEST (scale_copy "TEST" ${arg}) # scaleoffset add set (arg ${FILE13} -f dset_none:SOFF=31,IN) - set (TESTTYPE "TEST") - if (NOT USE_FILTER_SCALEOFFSET) - set (TESTTYPE "SKIP") - endif (NOT USE_FILTER_SCALEOFFSET) - ADD_H5_TEST (scale_add ${TESTTYPE} ${arg}) + ADD_H5_TEST (scale_add "TEST" ${arg}) # scaleoffset remove set (arg ${FILE13} -f dset_scaleoffset:NONE) - set (TESTTYPE "TEST") - if (NOT USE_FILTER_SCALEOFFSET) - set (TESTTYPE "SKIP") - endif (NOT USE_FILTER_SCALEOFFSET) - ADD_H5_TEST (scale_remove ${TESTTYPE} ${arg}) + ADD_H5_TEST (scale_remove "TEST" ${arg}) # remove all filters set (arg ${FILE11} -f NONE) set (TESTTYPE "TEST") - if (NOT USE_FILTER_FLETCHER32 OR NOT USE_FILTER_DEFLATE OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SHUFFLE OR NOT USE_FILTER_NBIT OR NOT USE_FILTER_SCALEOFFSET) + if (NOT USE_FILTER_DEFLATE OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_SZIP_ENCODER) set (TESTTYPE "SKIP") - endif (NOT USE_FILTER_FLETCHER32 OR NOT USE_FILTER_DEFLATE OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SHUFFLE OR NOT USE_FILTER_NBIT OR NOT USE_FILTER_SCALEOFFSET) + endif (NOT USE_FILTER_DEFLATE OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_SZIP_ENCODER) ADD_H5_TEST (remove_all ${TESTTYPE} ${arg}) #filter conversions @@ -943,14 +871,14 @@ # Use first dset to test. #--------------------------------------------------------------------------- # chunk to chunk - specify chunk dim bigger than any current dim -ADD_H5_VERIFY_TEST (chunk2chunk "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 CHUNK -l chunk_unlimit1:CHUNK=100x300) + ADD_H5_VERIFY_TEST (chunk2chunk "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 CHUNK -l chunk_unlimit1:CHUNK=100x300) # chunk to contiguous -ADD_H5_VERIFY_TEST (chunk2conti "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 CONTI -l chunk_unlimit1:CONTI) + ADD_H5_VERIFY_TEST (chunk2conti "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 CONTI -l chunk_unlimit1:CONTI) # chunk to compact - convert big dataset (should be > 64k) for this purpose, # should remain as original layout (chunk) -ADD_H5_VERIFY_TEST (chunk2compa "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 CHUNK -l chunk_unlimit1:COMPA) + ADD_H5_VERIFY_TEST (chunk2compa "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 CHUNK -l chunk_unlimit1:COMPA) #-------------------------------------------------------------------------- # Test -f for some specific cases. Chunked dataset with unlimited max dims. @@ -960,16 +888,16 @@ ADD_H5_VERIFY_TEST (chunk2compa "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 CHUN # - should not change max dims from unlimit # chunk dim is bigger than dataset dim. ( dset size < 64k ) -ADD_H5_VERIFY_TEST (error1 "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 H5S_UNLIMITED -f chunk_unlimit1:NONE) + ADD_H5_VERIFY_TEST (error1 "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 H5S_UNLIMITED -f chunk_unlimit1:NONE) # chunk dim is bigger than dataset dim. ( dset size > 64k ) -ADD_H5_VERIFY_TEST (error2 "TEST" 0 h5repack_layout3.h5 chunk_unlimit2 H5S_UNLIMITED -f chunk_unlimit2:NONE) + ADD_H5_VERIFY_TEST (error2 "TEST" 0 h5repack_layout3.h5 chunk_unlimit2 H5S_UNLIMITED -f chunk_unlimit2:NONE) # chunk dims are smaller than dataset dims. ( dset size < 64k ) -ADD_H5_VERIFY_TEST (error3 "TEST" 0 h5repack_layout3.h5 chunk_unlimit3 H5S_UNLIMITED -f chunk_unlimit3:NONE) + ADD_H5_VERIFY_TEST (error3 "TEST" 0 h5repack_layout3.h5 chunk_unlimit3 H5S_UNLIMITED -f chunk_unlimit3:NONE) # file input - should not fail -ADD_H5_TEST (error4 "TEST" h5repack_layout3.h5 -f NONE) + ADD_H5_TEST (error4 "TEST" h5repack_layout3.h5 -f NONE) #-------------------------------------------------------------------------- # Test base: Convert CHUNK to CONTI for a chunked dataset with small dataset @@ -977,9 +905,9 @@ ADD_H5_TEST (error4 "TEST" h5repack_layout3.h5 -f NONE) # (HDFFV-8214) #-------------------------------------------------------------------------- # chunk dim is bigger than dataset dim. should succeed. -ADD_H5_VERIFY_TEST (ckdim_biger "TEST" 0 h5repack_layout3.h5 chunk_unlimit2 CONTI -l chunk_unlimit2:CONTI) + ADD_H5_VERIFY_TEST (ckdim_biger "TEST" 0 h5repack_layout3.h5 chunk_unlimit2 CONTI -l chunk_unlimit2:CONTI) # chunk dim is smaller than dataset dim. should succeed. -ADD_H5_VERIFY_TEST (ckdim_smaller "TEST" 0 h5repack_layout3.h5 chunk_unlimit3 CONTI -l chunk_unlimit3:CONTI) + ADD_H5_VERIFY_TEST (ckdim_smaller "TEST" 0 h5repack_layout3.h5 chunk_unlimit3 CONTI -l chunk_unlimit3:CONTI) @@ -1008,9 +936,9 @@ ADD_H5_VERIFY_TEST (ckdim_smaller "TEST" 0 h5repack_layout3.h5 chunk_unlimit3 CO # several global filters set (arg ${FILE4} --filter GZIP=1 --filter SHUF) set (TESTTYPE "TEST") - if (NOT USE_FILTER_DEFLATE OR NOT USE_FILTER_SHUFFLE) + if (NOT USE_FILTER_DEFLATE) set (TESTTYPE "SKIP") - endif (NOT USE_FILTER_DEFLATE OR NOT USE_FILTER_SHUFFLE) + endif (NOT USE_FILTER_DEFLATE) ADD_H5_TEST (global_filters ${TESTTYPE} ${arg}) # syntax of -i infile -o outfile diff --git a/tools/h5repack/Makefile.in b/tools/h5repack/Makefile.in index 698b8a3..6d1bfd6 100644 --- a/tools/h5repack/Makefile.in +++ b/tools/h5repack/Makefile.in @@ -438,7 +438,6 @@ AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@ AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@ AM_MAKEFLAGS = @AM_MAKEFLAGS@ AR = @AR@ -AS = @AS@ AUTOCONF = @AUTOCONF@ AUTOHEADER = @AUTOHEADER@ AUTOMAKE = @AUTOMAKE@ @@ -470,7 +469,6 @@ DIRECT_VFD = @DIRECT_VFD@ DLLTOOL = @DLLTOOL@ DSYMUTIL = @DSYMUTIL@ DUMPBIN = @DUMPBIN@ -DYNAMIC_DIRS = @DYNAMIC_DIRS@ ECHO_C = @ECHO_C@ ECHO_N = @ECHO_N@ ECHO_T = @ECHO_T@ @@ -489,17 +487,14 @@ FCFLAGS_f90 = @FCFLAGS_f90@ FCLIBS = @FCLIBS@ FC_VERSION = @FC_VERSION@ FGREP = @FGREP@ -FILTERS = @FILTERS@ FSEARCH_DIRS = @FSEARCH_DIRS@ GREP = @GREP@ H5_CFLAGS = @H5_CFLAGS@ H5_CPPFLAGS = @H5_CPPFLAGS@ H5_CXXFLAGS = @H5_CXXFLAGS@ -H5_CXX_SHARED = @H5_CXX_SHARED@ H5_FCFLAGS = @H5_FCFLAGS@ H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@ H5_LDFLAGS = @H5_LDFLAGS@ -H5_LONE_COLON = @H5_LONE_COLON@ H5_VERSION = @H5_VERSION@ HADDR_T = @HADDR_T@ HAVE_DMALLOC = @HAVE_DMALLOC@ @@ -562,7 +557,6 @@ R_INTEGER = @R_INTEGER@ R_LARGE = @R_LARGE@ SEARCH = @SEARCH@ SED = @SED@ -SETX = @SETX@ SET_MAKE = @SET_MAKE@ SHELL = @SHELL@ SIZE_T = @SIZE_T@ @@ -577,10 +571,6 @@ TR = @TR@ TRACE_API = @TRACE_API@ UNAME_INFO = @UNAME_INFO@ USE_FILTER_DEFLATE = @USE_FILTER_DEFLATE@ -USE_FILTER_FLETCHER32 = @USE_FILTER_FLETCHER32@ -USE_FILTER_NBIT = @USE_FILTER_NBIT@ -USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@ -USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@ USE_FILTER_SZIP = @USE_FILTER_SZIP@ USINGMEMCHECKER = @USINGMEMCHECKER@ VERSION = @VERSION@ diff --git a/tools/h5repack/h5repack.sh.in b/tools/h5repack/h5repack.sh.in index a4d12bd..4a32491 100644 --- a/tools/h5repack/h5repack.sh.in +++ b/tools/h5repack/h5repack.sh.in @@ -24,10 +24,6 @@ srcdir=@srcdir@ USE_FILTER_SZIP="@USE_FILTER_SZIP@" USE_FILTER_DEFLATE="@USE_FILTER_DEFLATE@" -USE_FILTER_SHUFFLE="@USE_FILTER_SHUFFLE@" -USE_FILTER_FLETCHER32="@USE_FILTER_FLETCHER32@" -USE_FILTER_NBIT="@USE_FILTER_NBIT@" -USE_FILTER_SCALEOFFSET="@USE_FILTER_SCALEOFFSET@" TESTNAME=h5repack EXIT_SUCCESS=0 @@ -97,6 +93,8 @@ $SRC_H5REPACK_TESTFILES/h5repack_layouto.h5 $SRC_H5REPACK_TESTFILES/h5repack_layout2.h5 $SRC_H5REPACK_TESTFILES/h5repack_layout3.h5 $SRC_H5REPACK_TESTFILES/h5repack_named_dtypes.h5 +$SRC_H5REPACK_TESTFILES/h5repack_nested_8bit_enum.h5 +$SRC_H5REPACK_TESTFILES/h5repack_nested_8bit_enum_deflated.h5 $SRC_H5REPACK_TESTFILES/h5repack_nbit.h5 $SRC_H5REPACK_TESTFILES/h5repack_objs.h5 $SRC_H5REPACK_TESTFILES/h5repack_refs.h5 @@ -705,6 +703,12 @@ TOOLTEST hlink h5repack_hlink.h5 TOOLTEST layout h5repack_layout.h5 TOOLTEST early h5repack_early.h5 +# nested 8bit enum in both deflated and non-deflated datafiles +if [ $USE_FILTER_DEFLATE != "yes" ]; then +TOOLTEST nested_8bit_enum h5repack_nested_8bit_enum.h5 +else +TOOLTEST nested_8bit_enum h5repack_nested_8bit_enum_deflated.h5 +fi # use h5repack_layout.h5 to write some filters (this file has no filters) @@ -742,40 +746,24 @@ fi # shuffle with individual object arg="h5repack_layout.h5 -f dset2:SHUF -l dset2:CHUNK=20x10" -if test $USE_FILTER_SHUFFLE != "yes" ; then - SKIP $arg -else - TOOLTEST shuffle_individual $arg -fi +TOOLTEST shuffle_individual $arg # shuffle for all arg="h5repack_layout.h5 -f SHUF" -if test $USE_FILTER_SHUFFLE != "yes" ; then - SKIP $arg -else - TOOLTEST shuffle_all $arg -fi +TOOLTEST shuffle_all $arg # fletcher32 with individual object arg="h5repack_layout.h5 -f dset2:FLET -l dset2:CHUNK=20x10" -if test $USE_FILTER_FLETCHER32 != "yes" ; then - SKIP $arg -else - TOOLTEST fletcher_individual $arg -fi +TOOLTEST fletcher_individual $arg # fletcher32 for all arg="h5repack_layout.h5 -f FLET" -if test $USE_FILTER_FLETCHER32 != "yes" ; then - SKIP $arg -else - TOOLTEST fletcher_all $arg -fi +TOOLTEST fletcher_all $arg # all filters arg="h5repack_layout.h5 -f dset2:SHUF -f dset2:FLET -f dset2:SZIP=8,NN -f dset2:GZIP=1 -l dset2:CHUNK=20x10" -if test $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SZIP != "yes" -o $USE_FILTER_SHUFFLE != "yes" -o $USE_FILTER_FLETCHER32 != "yes" -o $USE_FILTER_DEFLATE != "yes" ; then +if test $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SZIP != "yes" -o $USE_FILTER_DEFLATE != "yes" ; then SKIP $arg else TOOLTEST all_filters $arg @@ -828,87 +816,47 @@ fi # shuffle copy arg="h5repack_shuffle.h5" -if test $USE_FILTER_SHUFFLE != "yes" ; then - SKIP $arg -else - TOOLTEST shuffle_copy $arg -fi +TOOLTEST shuffle_copy $arg # shuffle remove arg="h5repack_shuffle.h5 -f dset_shuffle:NONE" -if test $USE_FILTER_SHUFFLE != "yes" ; then - SKIP $arg -else - TOOLTEST shuffle_remove $arg -fi +TOOLTEST shuffle_remove $arg # fletcher32 copy arg="h5repack_fletcher.h5" -if test $USE_FILTER_FLETCHER32 != "yes" ; then - SKIP $arg -else - TOOLTEST fletcher_copy $arg -fi +TOOLTEST fletcher_copy $arg # fletcher32 remove arg="h5repack_fletcher.h5 -f dset_fletcher32:NONE" -if test $USE_FILTER_FLETCHER32 != "yes" ; then - SKIP $arg -else - TOOLTEST fletcher_remove $arg -fi +TOOLTEST fletcher_remove $arg # nbit copy arg="h5repack_nbit.h5" -if test $USE_FILTER_NBIT != "yes" ; then - SKIP $arg -else - TOOLTEST nbit_copy $arg -fi +TOOLTEST nbit_copy $arg # nbit remove arg="h5repack_nbit.h5 -f dset_nbit:NONE" -if test $USE_FILTER_NBIT != "yes" ; then - SKIP $arg -else - TOOLTEST nbit_remove $arg -fi +TOOLTEST nbit_remove $arg # nbit add arg="h5repack_nbit.h5 -f dset_int31:NBIT" -if test $USE_FILTER_NBIT != "yes" ; then - SKIP $arg -else - TOOLTEST nbit_add $arg -fi +TOOLTEST nbit_add $arg # scaleoffset copy arg="h5repack_soffset.h5" -if test $USE_FILTER_SCALEOFFSET != "yes" ; then - SKIP $arg -else - TOOLTEST scale_copy $arg -fi +TOOLTEST scale_copy $arg # scaleoffset add arg="h5repack_soffset.h5 -f dset_none:SOFF=31,IN" -if test $USE_FILTER_SCALEOFFSET != "yes" ; then - SKIP $arg -else - TOOLTEST scale_add $arg -fi +TOOLTEST scale_add $arg # scaleoffset remove arg="h5repack_soffset.h5 -f dset_scaleoffset:NONE" -if test $USE_FILTER_SCALEOFFSET != "yes" ; then - SKIP $arg -else - TOOLTEST scale_remove $arg -fi +TOOLTEST scale_remove $arg # remove all filters arg="h5repack_filters.h5 -f NONE" -if test $USE_FILTER_FLETCHER32 != "yes" -o $USE_FILTER_DEFLATE != "yes" -o $USE_FILTER_SZIP != "yes" -o $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SHUFFLE != "yes" -o $USE_FILTER_NBIT != "yes" -o $USE_FILTER_SCALEOFFSET != "yes" ; then +if test $USE_FILTER_DEFLATE != "yes" -o $USE_FILTER_SZIP != "yes" -o $USE_FILTER_SZIP_ENCODER != "yes" ; then SKIP $arg else TOOLTEST remove_all $arg @@ -1061,7 +1009,7 @@ fi # several global filters arg="h5repack_layout.h5 --filter GZIP=1 --filter SHUF" -if test $USE_FILTER_DEFLATE != "yes" -o $USE_FILTER_SHUFFLE != "yes" ; then +if test $USE_FILTER_DEFLATE != "yes" ; then SKIP $arg else TOOLTEST global_filters $arg diff --git a/tools/h5repack/h5repacktst.c b/tools/h5repack/h5repacktst.c index 5ec9a8d..46d895c 100644 --- a/tools/h5repack/h5repacktst.c +++ b/tools/h5repack/h5repacktst.c @@ -445,8 +445,6 @@ int main (void) TESTING(" addding shuffle filter"); -#ifdef H5_HAVE_FILTER_SHUFFLE - /*------------------------------------------------------------------------- * test an individual object option *------------------------------------------------------------------------- @@ -468,9 +466,6 @@ int main (void) GOERROR; PASSED(); -#else - SKIPPED(); -#endif /*------------------------------------------------------------------------- * test all objects option @@ -479,8 +474,6 @@ int main (void) TESTING(" addding shuffle filter to all"); -#ifdef H5_HAVE_FILTER_SHUFFLE - /* fs_type = H5F_FILE_SPACE_ALL_PERSIST; fs_size = 1 */ if (h5repack_init (&pack_options, 0, H5_INC_ENUM(H5F_file_space_type_t, fs_type), ++fs_size) < 0) GOERROR; @@ -498,13 +491,9 @@ int main (void) GOERROR; PASSED(); -#else - SKIPPED(); -#endif - TESTING(" adding checksum filter"); -#ifdef H5_HAVE_FILTER_FLETCHER32 + TESTING(" adding checksum filter"); /*------------------------------------------------------------------------- * test an individual object option @@ -527,9 +516,6 @@ int main (void) GOERROR; PASSED(); -#else - SKIPPED(); -#endif /*------------------------------------------------------------------------- * test all objects option @@ -539,8 +525,6 @@ int main (void) TESTING(" adding checksum filter to all"); -#ifdef H5_HAVE_FILTER_FLETCHER32 - if (h5repack_init (&pack_options, 0, fs_type, fs_size) < 0) GOERROR; if (h5repack_addfilter("FLET",&pack_options) < 0) @@ -557,9 +541,6 @@ int main (void) GOERROR; PASSED(); -#else - SKIPPED(); -#endif TESTING(" filter queue fletcher, shuffle, deflate, szip"); @@ -573,16 +554,10 @@ int main (void) GOERROR; if (h5repack_addlayout("dset1:CHUNK 20x10",&pack_options) < 0) GOERROR; - -#if defined (H5_HAVE_FILTER_FLETCHER32) if (h5repack_addfilter("dset1:FLET",&pack_options) < 0) GOERROR; -#endif - -#ifdef H5_HAVE_FILTER_SHUFFLE if (h5repack_addfilter("dset1:SHUF",&pack_options) < 0) GOERROR; -#endif #if defined (H5_HAVE_FILTER_SZIP) if (szip_can_encode) { @@ -1039,7 +1014,6 @@ int main (void) TESTING(" copy of shuffle filter"); -#ifdef H5_HAVE_FILTER_SHUFFLE if (h5repack_init (&pack_options, 0, fs_type, fs_size) < 0) GOERROR; if (h5repack(FNAME9,FNAME9OUT,&pack_options) < 0) @@ -1052,13 +1026,10 @@ int main (void) GOERROR; PASSED(); -#else - SKIPPED(); -#endif + TESTING(" removing shuffle filter"); -#ifdef H5_HAVE_FILTER_SHUFFLE if (h5repack_init (&pack_options, 0, fs_type, fs_size) < 0) GOERROR; if (h5repack_addfilter("dset_shuffle:NONE",&pack_options) < 0) @@ -1073,13 +1044,10 @@ int main (void) GOERROR; PASSED(); -#else - SKIPPED(); -#endif + TESTING(" copy of fletcher filter"); -#ifdef H5_HAVE_FILTER_FLETCHER32 if (h5repack_init (&pack_options, 0, fs_type, fs_size) < 0) GOERROR; if (h5repack(FNAME10,FNAME10OUT,&pack_options) < 0) @@ -1092,13 +1060,10 @@ int main (void) GOERROR; PASSED(); -#else - SKIPPED(); -#endif + TESTING(" removing fletcher filter"); -#ifdef H5_HAVE_FILTER_FLETCHER32 if (h5repack_init (&pack_options, 0, fs_type, fs_size) < 0) GOERROR; if (h5repack_addfilter("dset_fletcher32:NONE",&pack_options) < 0) @@ -1113,14 +1078,10 @@ int main (void) GOERROR; PASSED(); -#else - SKIPPED(); -#endif TESTING(" copy of nbit filter"); -#ifdef H5_HAVE_FILTER_NBIT if (h5repack_init (&pack_options, 0, fs_type, fs_size) < 0) GOERROR; if (h5repack(FNAME12,FNAME12OUT,&pack_options) < 0) @@ -1133,13 +1094,10 @@ int main (void) GOERROR; PASSED(); -#else - SKIPPED(); -#endif + TESTING(" removing nbit filter"); -#ifdef H5_HAVE_FILTER_NBIT if (h5repack_init (&pack_options, 0, fs_type, fs_size) < 0) GOERROR; if (h5repack_addfilter("dset_nbit:NONE",&pack_options) < 0) @@ -1154,14 +1112,10 @@ int main (void) GOERROR; PASSED(); -#else - SKIPPED(); -#endif TESTING(" adding nbit filter"); -#ifdef H5_HAVE_FILTER_NBIT if (h5repack_init (&pack_options, 0, fs_type, fs_size) < 0) GOERROR; if (h5repack_addfilter("dset_int31:NBIT",&pack_options) < 0) @@ -1176,14 +1130,10 @@ int main (void) GOERROR; PASSED(); -#else - SKIPPED(); -#endif TESTING(" copy of scaleoffset filter"); -#ifdef H5_HAVE_FILTER_SCALEOFFSET if (h5repack_init (&pack_options, 0, fs_type, fs_size) < 0) GOERROR; if (h5repack(FNAME13,FNAME13OUT,&pack_options) < 0) @@ -1196,13 +1146,10 @@ int main (void) GOERROR; PASSED(); -#else - SKIPPED(); -#endif + TESTING(" removing scaleoffset filter"); -#ifdef H5_HAVE_FILTER_SCALEOFFSET if (h5repack_init (&pack_options, 0, fs_type, fs_size) < 0) GOERROR; if (h5repack_addfilter("dset_scaleoffset:NONE",&pack_options) < 0) @@ -1217,14 +1164,10 @@ int main (void) GOERROR; PASSED(); -#else - SKIPPED(); -#endif TESTING(" adding scaleoffset filter"); -#ifdef H5_HAVE_FILTER_SCALEOFFSET if (h5repack_init (&pack_options, 0, fs_type, fs_size) < 0) GOERROR; if (h5repack_addfilter("dset_none:SOFF=31,IN",&pack_options) < 0) @@ -1239,10 +1182,6 @@ int main (void) GOERROR; PASSED(); -#else - SKIPPED(); -#endif - /*------------------------------------------------------------------------- @@ -1258,9 +1197,7 @@ int main (void) TESTING(" filter conversion from deflate to szip"); -#if defined (H5_HAVE_FILTER_SZIP) \ - && defined (H5_HAVE_FILTER_DEFLATE) \ - && defined (H5_HAVE_FILTER_FLETCHER32) && defined (H5_HAVE_FILTER_SHUFFLE) +#if defined (H5_HAVE_FILTER_SZIP) && defined (H5_HAVE_FILTER_DEFLATE) if (szip_can_encode) { /* fs_type = H5F_FILE_SPACE_VFD; fs_size = 4 */ @@ -1287,9 +1224,7 @@ int main (void) TESTING(" filter conversion from szip to deflate"); -#if defined (H5_HAVE_FILTER_SZIP) \ - && defined (H5_HAVE_FILTER_DEFLATE) \ - && defined (H5_HAVE_FILTER_FLETCHER32) && defined (H5_HAVE_FILTER_SHUFFLE) +#if defined (H5_HAVE_FILTER_SZIP) && defined (H5_HAVE_FILTER_DEFLATE) if (szip_can_encode) { if (h5repack_init (&pack_options, 0, fs_type, fs_size) < 0) @@ -1321,8 +1256,7 @@ int main (void) TESTING(" removing all filters"); -#if defined (H5_HAVE_FILTER_SZIP) && defined (H5_HAVE_FILTER_DEFLATE) \ - && defined (H5_HAVE_FILTER_FLETCHER32) && defined (H5_HAVE_FILTER_SHUFFLE) +#if defined (H5_HAVE_FILTER_SZIP) && defined (H5_HAVE_FILTER_DEFLATE) if (h5repack_init (&pack_options, 0, fs_type, fs_size) < 0) GOERROR; @@ -1429,7 +1363,7 @@ int main (void) TESTING(" several global filters"); -#if defined (H5_HAVE_FILTER_DEFLATE) && defined (H5_HAVE_FILTER_SHUFFLE) +#if defined (H5_HAVE_FILTER_DEFLATE) if (h5repack_init (&pack_options, 0, fs_type, fs_size) < 0) GOERROR; @@ -2347,13 +2281,12 @@ int make_shuffle(hid_t loc_id) * shuffle *------------------------------------------------------------------------- */ -#if defined (H5_HAVE_FILTER_SHUFFLE) + /* set the shuffle filter */ if (H5Pset_shuffle(dcpl) < 0) goto out; if (make_dset(loc_id,"dset_shuffle",sid,dcpl,buf) < 0) goto out; -#endif /*------------------------------------------------------------------------- @@ -2414,7 +2347,7 @@ int make_fletcher32(hid_t loc_id) * fletcher32 *------------------------------------------------------------------------- */ -#if defined (H5_HAVE_FILTER_FLETCHER32) + /* remove the filters from the dcpl */ if (H5Premove_filter(dcpl,H5Z_FILTER_ALL) < 0) goto out; @@ -2423,7 +2356,6 @@ int make_fletcher32(hid_t loc_id) goto out; if (make_dset(loc_id,"dset_fletcher32",sid,dcpl,buf) < 0) goto out; -#endif /*------------------------------------------------------------------------- * close space and dcpl @@ -2488,7 +2420,6 @@ int make_nbit(hid_t loc_id) goto out; } -#if defined H5_HAVE_FILTER_NBIT /* remove the filters from the dcpl */ if(H5Premove_filter(dcpl, H5Z_FILTER_ALL) < 0) { @@ -2522,7 +2453,6 @@ int make_nbit(hid_t loc_id) goto out; } H5Dclose(dsid); -#endif /*------------------------------------------------------------------------- * close @@ -2584,7 +2514,6 @@ int make_scaleoffset(hid_t loc_id) dtid = H5Tcopy(H5T_NATIVE_INT); -#if defined (H5_HAVE_FILTER_SCALEOFFSET) /* remove the filters from the dcpl */ if(H5Premove_filter(dcpl, H5Z_FILTER_ALL) < 0) { H5Tclose(dtid); @@ -2613,7 +2542,6 @@ int make_scaleoffset(hid_t loc_id) } H5Tclose(dtid); H5Dclose(dsid); -#endif /*------------------------------------------------------------------------- * close space and dcpl @@ -2647,10 +2575,8 @@ int make_all_filters(hid_t loc_id) { hid_t dcpl; /* dataset creation property list */ hid_t sid; /* dataspace ID */ -#if defined (H5_HAVE_FILTER_NBIT) hid_t dtid; hid_t dsid; -#endif /* H5_HAVE_FILTER_NBIT */ #if defined (H5_HAVE_FILTER_SZIP) unsigned szip_options_mask=H5_SZIP_ALLOW_K13_OPTION_MASK|H5_SZIP_NN_OPTION_MASK; unsigned szip_pixels_per_block=8; @@ -2680,17 +2606,13 @@ int make_all_filters(hid_t loc_id) if (H5Pset_chunk(dcpl, RANK, chunk_dims) < 0) goto out; -#if defined (H5_HAVE_FILTER_SHUFFLE) /* set the shuffle filter */ if (H5Pset_shuffle(dcpl) < 0) goto out; -#endif -#if defined (H5_HAVE_FILTER_FLETCHER32) /* set the checksum filter */ if (H5Pset_fletcher32(dcpl) < 0) goto out; -#endif #if defined (H5_HAVE_FILTER_SZIP) if (h5tools_can_encode(H5Z_FILTER_SZIP) == 1) @@ -2716,7 +2638,6 @@ int make_all_filters(hid_t loc_id) if (make_dset(loc_id,"dset_all",sid,dcpl,buf) < 0) goto out; -#if defined (H5_HAVE_FILTER_FLETCHER32) /* remove the filters from the dcpl */ if (H5Premove_filter(dcpl,H5Z_FILTER_ALL) < 0) goto out; @@ -2725,7 +2646,6 @@ int make_all_filters(hid_t loc_id) goto out; if (make_dset(loc_id,"dset_fletcher32",sid,dcpl,buf) < 0) goto out; -#endif /* Make sure encoding is enabled */ @@ -2747,7 +2667,6 @@ int make_all_filters(hid_t loc_id) #endif -#if defined (H5_HAVE_FILTER_SHUFFLE) /* remove the filters from the dcpl */ if (H5Premove_filter(dcpl,H5Z_FILTER_ALL) < 0) goto out; @@ -2756,7 +2675,6 @@ int make_all_filters(hid_t loc_id) goto out; if (make_dset(loc_id,"dset_shuffle",sid,dcpl,buf) < 0) goto out; -#endif #if defined (H5_HAVE_FILTER_DEFLATE) @@ -2772,7 +2690,6 @@ int make_all_filters(hid_t loc_id) -#if defined (H5_HAVE_FILTER_NBIT) /* remove the filters from the dcpl */ if (H5Premove_filter(dcpl, H5Z_FILTER_ALL) < 0) goto out; @@ -2793,8 +2710,6 @@ int make_all_filters(hid_t loc_id) return -1; if(H5Dclose(dsid) < 0) return -1; -#endif - if(H5Sclose(sid) < 0) goto out; diff --git a/tools/h5repack/testfiles/README b/tools/h5repack/testfiles/README new file mode 100644 index 0000000..4096dee --- /dev/null +++ b/tools/h5repack/testfiles/README @@ -0,0 +1,5 @@ +h5repack_nested_8bit_enum_deflated.h5: +h5repack_nested_8bit_enum.h5: + enuberated 8bit type nested in compount type. Original file provided + by a user (HDFFV-8667) as a test file. Used h5copy to extract only the + Compound type dataset. The non-deflated version is produced by h5repack. diff --git a/tools/h5repack/testfiles/h5repack_nested_8bit_enum.h5 b/tools/h5repack/testfiles/h5repack_nested_8bit_enum.h5 Binary files differnew file mode 100644 index 0000000..f1bd8e9 --- /dev/null +++ b/tools/h5repack/testfiles/h5repack_nested_8bit_enum.h5 diff --git a/tools/h5repack/testfiles/h5repack_nested_8bit_enum_deflated.h5 b/tools/h5repack/testfiles/h5repack_nested_8bit_enum_deflated.h5 Binary files differnew file mode 100644 index 0000000..2e66da2 --- /dev/null +++ b/tools/h5repack/testfiles/h5repack_nested_8bit_enum_deflated.h5 diff --git a/tools/h5stat/CMakeLists.txt b/tools/h5stat/CMakeLists.txt index 2969405..5230693 100644 --- a/tools/h5stat/CMakeLists.txt +++ b/tools/h5stat/CMakeLists.txt @@ -11,7 +11,7 @@ INCLUDE_DIRECTORIES (${HDF5_TOOLS_SRC_DIR}/lib) # -------------------------------------------------------------------- add_executable (h5stat ${HDF5_TOOLS_H5STAT_SOURCE_DIR}/h5stat.c) TARGET_NAMING (h5stat ${LIB_TYPE}) -TARGET_C_PROPERTIES (h5stat " " " ") +TARGET_C_PROPERTIES (h5stat ${LIB_TYPE} " " " ") target_link_libraries (h5stat ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) set_target_properties (h5stat PROPERTIES FOLDER tools) @@ -23,8 +23,8 @@ if (BUILD_TESTING) # -------------------------------------------------------------------- if (HDF5_BUILD_GENERATORS AND NOT BUILD_SHARED_LIBS) add_executable (h5stat_gentest ${HDF5_TOOLS_H5STAT_SOURCE_DIR}/h5stat_gentest.c) - TARGET_NAMING (h5stat_gentest ${LIB_TYPE}) - TARGET_C_PROPERTIES (h5stat_gentest " " " ") + TARGET_NAMING (h5stat_gentest STATIC) + TARGET_C_PROPERTIES (h5stat_gentest STATIC " " " ") target_link_libraries (h5stat_gentest ${HDF5_LIB_TARGET}) set_target_properties (h5stat_gentest PROPERTIES FOLDER generator/tools) diff --git a/tools/h5stat/Makefile.in b/tools/h5stat/Makefile.in index 993a226..1bbefe9 100644 --- a/tools/h5stat/Makefile.in +++ b/tools/h5stat/Makefile.in @@ -416,7 +416,6 @@ AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@ AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@ AM_MAKEFLAGS = @AM_MAKEFLAGS@ AR = @AR@ -AS = @AS@ AUTOCONF = @AUTOCONF@ AUTOHEADER = @AUTOHEADER@ AUTOMAKE = @AUTOMAKE@ @@ -448,7 +447,6 @@ DIRECT_VFD = @DIRECT_VFD@ DLLTOOL = @DLLTOOL@ DSYMUTIL = @DSYMUTIL@ DUMPBIN = @DUMPBIN@ -DYNAMIC_DIRS = @DYNAMIC_DIRS@ ECHO_C = @ECHO_C@ ECHO_N = @ECHO_N@ ECHO_T = @ECHO_T@ @@ -467,17 +465,14 @@ FCFLAGS_f90 = @FCFLAGS_f90@ FCLIBS = @FCLIBS@ FC_VERSION = @FC_VERSION@ FGREP = @FGREP@ -FILTERS = @FILTERS@ FSEARCH_DIRS = @FSEARCH_DIRS@ GREP = @GREP@ H5_CFLAGS = @H5_CFLAGS@ H5_CPPFLAGS = @H5_CPPFLAGS@ H5_CXXFLAGS = @H5_CXXFLAGS@ -H5_CXX_SHARED = @H5_CXX_SHARED@ H5_FCFLAGS = @H5_FCFLAGS@ H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@ H5_LDFLAGS = @H5_LDFLAGS@ -H5_LONE_COLON = @H5_LONE_COLON@ H5_VERSION = @H5_VERSION@ HADDR_T = @HADDR_T@ HAVE_DMALLOC = @HAVE_DMALLOC@ @@ -540,7 +535,6 @@ R_INTEGER = @R_INTEGER@ R_LARGE = @R_LARGE@ SEARCH = @SEARCH@ SED = @SED@ -SETX = @SETX@ SET_MAKE = @SET_MAKE@ SHELL = @SHELL@ SIZE_T = @SIZE_T@ @@ -555,10 +549,6 @@ TR = @TR@ TRACE_API = @TRACE_API@ UNAME_INFO = @UNAME_INFO@ USE_FILTER_DEFLATE = @USE_FILTER_DEFLATE@ -USE_FILTER_FLETCHER32 = @USE_FILTER_FLETCHER32@ -USE_FILTER_NBIT = @USE_FILTER_NBIT@ -USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@ -USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@ USE_FILTER_SZIP = @USE_FILTER_SZIP@ USINGMEMCHECKER = @USINGMEMCHECKER@ VERSION = @VERSION@ diff --git a/tools/h5stat/testh5stat.sh.in b/tools/h5stat/testh5stat.sh.in index cb0446b..4d698da 100644 --- a/tools/h5stat/testh5stat.sh.in +++ b/tools/h5stat/testh5stat.sh.in @@ -25,10 +25,6 @@ srcdir=@srcdir@ # Determine which filters are available USE_FILTER_SZIP="@USE_FILTER_SZIP@" USE_FILTER_DEFLATE="@USE_FILTER_DEFLATE@" -USE_FILTER_SHUFFLE="@USE_FILTER_SHUFFLE@" -USE_FILTER_FLETCHER32="@USE_FILTER_FLETCHER32@" -USE_FILTER_NBIT="@USE_FILTER_NBIT@" -USE_FILTER_SCALEOFFSET="@USE_FILTER_SCALEOFFSET@" TESTNAME=h5stat EXIT_SUCCESS=0 diff --git a/tools/lib/CMakeLists.txt b/tools/lib/CMakeLists.txt index 35ad46e..dbd72cd 100644 --- a/tools/lib/CMakeLists.txt +++ b/tools/lib/CMakeLists.txt @@ -38,14 +38,14 @@ set (H5_TOOLS_LIB_HDRS ) add_library (${HDF5_TOOLS_LIB_TARGET} ${LIB_TYPE} ${H5_TOOLS_LIB_SRCS} ${H5_TOOLS_LIB_HDRS}) -TARGET_C_PROPERTIES (${HDF5_TOOLS_LIB_TARGET} " " " ") +TARGET_C_PROPERTIES (${HDF5_TOOLS_LIB_TARGET} ${LIB_TYPE} " " " ") target_link_libraries (${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) set_global_variable (HDF5_LIBRARIES_TO_EXPORT "${HDF5_LIBRARIES_TO_EXPORT};${HDF5_TOOLS_LIB_TARGET}") H5_SET_LIB_OPTIONS ( ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TOOLS_LIB_NAME} ${LIB_TYPE} HDF5_TOOLS_LIB_NAME_RELEASE - HDF5_TOOLS_LIB_NAME_DEBUG + HDF5_TOOLS_LIB_NAME_DEBUG ) #set_target_properties (${HDF5_TOOLS_LIB_TARGET} PROPERTIES COMPILE_DEFINITIONS H5DIFF_DEBUG) set_target_properties (${HDF5_TOOLS_LIB_TARGET} PROPERTIES diff --git a/tools/lib/Makefile.in b/tools/lib/Makefile.in index 607f1ed..0b531b3 100644 --- a/tools/lib/Makefile.in +++ b/tools/lib/Makefile.in @@ -403,7 +403,6 @@ AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@ AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@ AM_MAKEFLAGS = @AM_MAKEFLAGS@ AR = @AR@ -AS = @AS@ AUTOCONF = @AUTOCONF@ AUTOHEADER = @AUTOHEADER@ AUTOMAKE = @AUTOMAKE@ @@ -435,7 +434,6 @@ DIRECT_VFD = @DIRECT_VFD@ DLLTOOL = @DLLTOOL@ DSYMUTIL = @DSYMUTIL@ DUMPBIN = @DUMPBIN@ -DYNAMIC_DIRS = @DYNAMIC_DIRS@ ECHO_C = @ECHO_C@ ECHO_N = @ECHO_N@ ECHO_T = @ECHO_T@ @@ -454,17 +452,14 @@ FCFLAGS_f90 = @FCFLAGS_f90@ FCLIBS = @FCLIBS@ FC_VERSION = @FC_VERSION@ FGREP = @FGREP@ -FILTERS = @FILTERS@ FSEARCH_DIRS = @FSEARCH_DIRS@ GREP = @GREP@ H5_CFLAGS = @H5_CFLAGS@ H5_CPPFLAGS = @H5_CPPFLAGS@ H5_CXXFLAGS = @H5_CXXFLAGS@ -H5_CXX_SHARED = @H5_CXX_SHARED@ H5_FCFLAGS = @H5_FCFLAGS@ H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@ H5_LDFLAGS = @H5_LDFLAGS@ -H5_LONE_COLON = @H5_LONE_COLON@ H5_VERSION = @H5_VERSION@ HADDR_T = @HADDR_T@ HAVE_DMALLOC = @HAVE_DMALLOC@ @@ -527,7 +522,6 @@ R_INTEGER = @R_INTEGER@ R_LARGE = @R_LARGE@ SEARCH = @SEARCH@ SED = @SED@ -SETX = @SETX@ SET_MAKE = @SET_MAKE@ SHELL = @SHELL@ SIZE_T = @SIZE_T@ @@ -542,10 +536,6 @@ TR = @TR@ TRACE_API = @TRACE_API@ UNAME_INFO = @UNAME_INFO@ USE_FILTER_DEFLATE = @USE_FILTER_DEFLATE@ -USE_FILTER_FLETCHER32 = @USE_FILTER_FLETCHER32@ -USE_FILTER_NBIT = @USE_FILTER_NBIT@ -USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@ -USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@ USE_FILTER_SZIP = @USE_FILTER_SZIP@ USINGMEMCHECKER = @USINGMEMCHECKER@ VERSION = @VERSION@ diff --git a/tools/lib/h5tools_dump.c b/tools/lib/h5tools_dump.c index 7d25c7a..29a6d68 100644 --- a/tools/lib/h5tools_dump.c +++ b/tools/lib/h5tools_dump.c @@ -2914,7 +2914,6 @@ h5tools_print_virtual_selection(hid_t vspace, hid_t dcpl_id, size_t index, h5tools_render_element(stream, info, ctx, buffer, curr_pos, (size_t) ncols, (hsize_t) 0, (hsize_t) 0); } - /*------------------------------------------------------------------------- * Function: dump_fill_value * diff --git a/tools/lib/h5tools_filters.c b/tools/lib/h5tools_filters.c index 79cf253..ccdba26 100644 --- a/tools/lib/h5tools_filters.c +++ b/tools/lib/h5tools_filters.c @@ -107,44 +107,24 @@ int h5tools_canreadf(const char* name, /* object name, serves also as boolean pr *------------------------------------------------------------------------- */ case H5Z_FILTER_SHUFFLE: -#ifndef H5_HAVE_FILTER_SHUFFLE - if (name) - print_warning(name,"shuffle"); - return 0; -#endif break; /*------------------------------------------------------------------------- * H5Z_FILTER_FLETCHER32 3 , fletcher32 checksum of EDC *------------------------------------------------------------------------- */ case H5Z_FILTER_FLETCHER32: -#ifndef H5_HAVE_FILTER_FLETCHER32 - if (name) - print_warning(name,"fletcher32"); - return 0; -#endif break; /*------------------------------------------------------------------------- * H5Z_FILTER_NBIT *------------------------------------------------------------------------- */ case H5Z_FILTER_NBIT: -#ifndef H5_HAVE_FILTER_NBIT - if (name) - print_warning(name,"nbit"); - return 0; -#endif break; /*------------------------------------------------------------------------- * H5Z_FILTER_SCALEOFFSET *------------------------------------------------------------------------- */ case H5Z_FILTER_SCALEOFFSET: -#ifndef H5_HAVE_FILTER_SCALEOFFSET - if (name) - print_warning(name,"scaleoffset"); - return 0; -#endif break; }/*switch*/ }/*for*/ @@ -211,24 +191,12 @@ int h5tools_can_encode(H5Z_filter_t filtn) { #endif break; case H5Z_FILTER_SHUFFLE: -#ifndef H5_HAVE_FILTER_SHUFFLE - return 0; -#endif break; case H5Z_FILTER_FLETCHER32: -#ifndef H5_HAVE_FILTER_FLETCHER32 - return 0; -#endif break; case H5Z_FILTER_NBIT: -#ifndef H5_HAVE_FILTER_NBIT - return 0; -#endif break; case H5Z_FILTER_SCALEOFFSET: -#ifndef H5_HAVE_FILTER_SCALEOFFSET - return 0; -#endif break; }/*switch*/ diff --git a/tools/lib/h5tools_str.c b/tools/lib/h5tools_str.c index 8302c48..4381df8 100644 --- a/tools/lib/h5tools_str.c +++ b/tools/lib/h5tools_str.c @@ -155,11 +155,7 @@ h5tools_str_append(h5tools_str_t *str/*in,out*/, const char *fmt, ...) * to lack of buffer size, so try one more time after realloc more * buffer size before return NULL. */ - if (nchars < 0 -#ifndef H5_VSNPRINTF_WORKS - && (HDstrlen(str->s) < str->nalloc) -#endif - ) { + if (nchars < 0) { /* failure, such as bad format */ return NULL; } @@ -809,7 +805,7 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai float tempfloat; HDmemcpy(&tempfloat, vp, sizeof(float)); - h5tools_str_append(str, OPT(info->fmt_float, "%g"), tempfloat); + h5tools_str_append(str, OPT(info->fmt_float, "%g"), (double)tempfloat); } else if (sizeof(double) == nsize) { /* if (H5Tequal(type, H5T_NATIVE_DOUBLE)) */ diff --git a/tools/lib/h5tools_utils.c b/tools/lib/h5tools_utils.c index d7c5adb..fc8cf1d 100644 --- a/tools/lib/h5tools_utils.c +++ b/tools/lib/h5tools_utils.c @@ -89,28 +89,11 @@ void parallel_print(const char* format, ...) HDvprintf(format, ap); else { if(overflow_file == NULL) /*no overflow has occurred yet */ { -#if 0 - printf("calling HDvsnprintf: OUTBUFF_SIZE=%ld, outBuffOffset=%ld, ", (long)OUTBUFF_SIZE, (long)outBuffOffset); -#endif bytes_written = HDvsnprintf(outBuff+outBuffOffset, OUTBUFF_SIZE-outBuffOffset, format, ap); -#if 0 - printf("bytes_written=%ld\n", (long)bytes_written); -#endif HDva_end(ap); HDva_start(ap, format); -#if 0 - printf("Result: bytes_written=%ld, OUTBUFF_SIZE-outBuffOffset=%ld\n", (long)bytes_written, (long)OUTBUFF_SIZE-outBuffOffset); -#endif - - if ((bytes_written < 0) || -#ifdef H5_VSNPRINTF_WORKS - (bytes_written >= (OUTBUFF_SIZE-outBuffOffset)) -#else - ((bytes_written+1) == (OUTBUFF_SIZE-outBuffOffset)) -#endif - ) - { + if((bytes_written < 0) || (bytes_written >= (OUTBUFF_SIZE - outBuffOffset))) { /* Terminate the outbuff at the end of the previous output */ outBuff[outBuffOffset] = '\0'; diff --git a/tools/lib/h5tools_utils.h b/tools/lib/h5tools_utils.h index 3285278..fd588b9 100644 --- a/tools/lib/h5tools_utils.h +++ b/tools/lib/h5tools_utils.h @@ -124,9 +124,9 @@ H5TOOLS_DLLVAR int h5tools_nCols; /*max number of columns for /* Definitions of useful routines */ H5TOOLS_DLL void indentation(int); H5TOOLS_DLL void print_version(const char *progname); -H5TOOLS_DLL void parallel_print(const char* format, ... ); -H5TOOLS_DLL void error_msg(const char *fmt, ...); -H5TOOLS_DLL void warn_msg(const char *fmt, ...); +H5TOOLS_DLL void parallel_print(const char* format, ... )__attribute__((format (printf, 1, 2))); +H5TOOLS_DLL void error_msg(const char *fmt, ...)__attribute__((format (printf, 1, 2))); +H5TOOLS_DLL void warn_msg(const char *fmt, ...)__attribute__((format (printf, 1, 2))); H5TOOLS_DLL void help_ref_msg(FILE *output); H5TOOLS_DLL void free_table(table_t *table); #ifdef H5DUMP_DEBUG diff --git a/tools/lib/h5trav.c b/tools/lib/h5trav.c index d0a4a76..90e6d3d 100644 --- a/tools/lib/h5trav.c +++ b/tools/lib/h5trav.c @@ -50,6 +50,10 @@ typedef struct { hid_t fid; /* File ID being traversed */ } trav_print_udata_t; +typedef struct trav_path_op_data_t { + const char *path; +} trav_path_op_data_t; + /* format for hsize_t */ #ifdef H5TRAV_PRINT_SPACE #define HSIZE_T_FORMAT "%" H5_PRINTF_LL_WIDTH "u" @@ -899,11 +903,11 @@ trav_attr(hid_t #ifndef H5TRAV_PRINT_SPACE UNUSED #endif /* H5TRAV_PRINT_SPACE */ -obj, const char *attr_name, const H5A_info_t UNUSED *ainfo, void *op_data) +obj, const char *attr_name, const H5A_info_t UNUSED *ainfo, void *_op_data) { - char *buf; + trav_path_op_data_t *op_data = (trav_path_op_data_t *)_op_data; + const char *buf = op_data->path; - buf = (char*)op_data; if((strlen(buf)==1) && (*buf=='/')) printf(" %-10s %s%s", "attribute", buf, attr_name); else @@ -1009,10 +1013,14 @@ trav_print_visit_obj(const char *path, const H5O_info_t *oinfo, /* Check if we've already seen this object */ if(NULL == already_visited) { + trav_path_op_data_t op_data; + + op_data.path = path; /* Finish printing line about object */ printf("\n"); if(trav_verbosity > 0) - H5Aiterate_by_name(print_udata->fid, path, trav_index_by, trav_index_order, NULL, trav_attr, (void *)path, H5P_DEFAULT); + H5Aiterate_by_name(print_udata->fid, path, trav_index_by, trav_index_order, + NULL, trav_attr, &op_data, H5P_DEFAULT); } else /* Print the link's original name */ diff --git a/tools/lib/io_timer.c b/tools/lib/io_timer.c index 78e7fe9..b8d44de 100644 --- a/tools/lib/io_timer.c +++ b/tools/lib/io_timer.c @@ -40,7 +40,7 @@ * The number to divide the tv_usec field with to get a nice decimal to add to * the number of seconds. */ -#define MICROSECOND 1000000.0 +#define MICROSECOND 1000000.0F /* global variables */ io_time_t *timer_g; /* timer: global for stub functions */ diff --git a/tools/misc/CMakeLists.txt b/tools/misc/CMakeLists.txt index 932948d..e0f94d0 100644 --- a/tools/misc/CMakeLists.txt +++ b/tools/misc/CMakeLists.txt @@ -12,19 +12,19 @@ INCLUDE_DIRECTORIES (${HDF5_TOOLS_SRC_DIR}/lib) #-- Misc Executables add_executable (h5debug ${HDF5_TOOLS_MISC_SOURCE_DIR}/h5debug.c) TARGET_NAMING (h5debug ${LIB_TYPE}) -TARGET_C_PROPERTIES (h5debug " " " ") +TARGET_C_PROPERTIES (h5debug ${LIB_TYPE} " " " ") target_link_libraries (h5debug ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET}) set_target_properties (h5debug PROPERTIES FOLDER tools) add_executable (h5repart ${HDF5_TOOLS_MISC_SOURCE_DIR}/h5repart.c) TARGET_NAMING (h5repart ${LIB_TYPE}) -TARGET_C_PROPERTIES (h5repart " " " ") +TARGET_C_PROPERTIES (h5repart ${LIB_TYPE} " " " ") target_link_libraries (h5repart ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET}) set_target_properties (h5repart PROPERTIES FOLDER tools) add_executable (h5mkgrp ${HDF5_TOOLS_MISC_SOURCE_DIR}/h5mkgrp.c) TARGET_NAMING (h5mkgrp ${LIB_TYPE}) -TARGET_C_PROPERTIES (h5mkgrp " " " ") +TARGET_C_PROPERTIES (h5mkgrp ${LIB_TYPE} " " " ") target_link_libraries (h5mkgrp ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) set_target_properties (h5mkgrp PROPERTIES FOLDER tools) @@ -47,8 +47,8 @@ if (BUILD_TESTING) # -------------------------------------------------------------------- if (HDF5_BUILD_GENERATORS AND NOT BUILD_SHARED_LIBS) add_executable (h5repart_gentest ${HDF5_TOOLS_MISC_SOURCE_DIR}/h5repart_gentest.c) - TARGET_NAMING (h5repart_gentest ${LIB_TYPE}) - TARGET_C_PROPERTIES (h5repart_gentest " " " ") + TARGET_NAMING (h5repart_gentest STATIC) + TARGET_C_PROPERTIES (h5repart_gentest STATIC " " " ") target_link_libraries (h5repart_gentest ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET}) set_target_properties (h5repart_gentest PROPERTIES FOLDER generator/tools) #add_test (NAME h5repart_gentest COMMAND $<TARGET_FILE:h5repart_gentest>) @@ -56,7 +56,7 @@ if (BUILD_TESTING) add_executable (h5repart_test ${HDF5_TOOLS_MISC_SOURCE_DIR}/repart_test.c) TARGET_NAMING (h5repart_test ${LIB_TYPE}) - TARGET_C_PROPERTIES (h5repart_test " " " ") + TARGET_C_PROPERTIES (h5repart_test ${LIB_TYPE} " " " ") target_link_libraries (h5repart_test ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET}) set_target_properties (h5repart_test PROPERTIES FOLDER tools) diff --git a/tools/misc/Makefile.in b/tools/misc/Makefile.in index e11838f..1b8e0eb 100644 --- a/tools/misc/Makefile.in +++ b/tools/misc/Makefile.in @@ -441,7 +441,6 @@ AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@ AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@ AM_MAKEFLAGS = @AM_MAKEFLAGS@ AR = @AR@ -AS = @AS@ AUTOCONF = @AUTOCONF@ AUTOHEADER = @AUTOHEADER@ AUTOMAKE = @AUTOMAKE@ @@ -473,7 +472,6 @@ DIRECT_VFD = @DIRECT_VFD@ DLLTOOL = @DLLTOOL@ DSYMUTIL = @DSYMUTIL@ DUMPBIN = @DUMPBIN@ -DYNAMIC_DIRS = @DYNAMIC_DIRS@ ECHO_C = @ECHO_C@ ECHO_N = @ECHO_N@ ECHO_T = @ECHO_T@ @@ -492,17 +490,14 @@ FCFLAGS_f90 = @FCFLAGS_f90@ FCLIBS = @FCLIBS@ FC_VERSION = @FC_VERSION@ FGREP = @FGREP@ -FILTERS = @FILTERS@ FSEARCH_DIRS = @FSEARCH_DIRS@ GREP = @GREP@ H5_CFLAGS = @H5_CFLAGS@ H5_CPPFLAGS = @H5_CPPFLAGS@ H5_CXXFLAGS = @H5_CXXFLAGS@ -H5_CXX_SHARED = @H5_CXX_SHARED@ H5_FCFLAGS = @H5_FCFLAGS@ H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@ H5_LDFLAGS = @H5_LDFLAGS@ -H5_LONE_COLON = @H5_LONE_COLON@ H5_VERSION = @H5_VERSION@ HADDR_T = @HADDR_T@ HAVE_DMALLOC = @HAVE_DMALLOC@ @@ -565,7 +560,6 @@ R_INTEGER = @R_INTEGER@ R_LARGE = @R_LARGE@ SEARCH = @SEARCH@ SED = @SED@ -SETX = @SETX@ SET_MAKE = @SET_MAKE@ SHELL = @SHELL@ SIZE_T = @SIZE_T@ @@ -580,10 +574,6 @@ TR = @TR@ TRACE_API = @TRACE_API@ UNAME_INFO = @UNAME_INFO@ USE_FILTER_DEFLATE = @USE_FILTER_DEFLATE@ -USE_FILTER_FLETCHER32 = @USE_FILTER_FLETCHER32@ -USE_FILTER_NBIT = @USE_FILTER_NBIT@ -USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@ -USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@ USE_FILTER_SZIP = @USE_FILTER_SZIP@ USINGMEMCHECKER = @USINGMEMCHECKER@ VERSION = @VERSION@ diff --git a/tools/misc/h5cc.in b/tools/misc/h5cc.in index da1a26d..cabd83f 100644 --- a/tools/misc/h5cc.in +++ b/tools/misc/h5cc.in @@ -347,7 +347,7 @@ if test "x$do_link" = "xyes"; then hpux*) flag="-Wl,+b -Wl," ;; freebsd*|solaris*) flag="-R" ;; rs6000*|aix*) flag="-L" ;; - irix*|sgi) flag="-rpath " ;; + sgi) flag="-rpath " ;; *) flag="" ;; esac diff --git a/tools/perform/CMakeLists.txt b/tools/perform/CMakeLists.txt index e6abf7f..17b40fa 100644 --- a/tools/perform/CMakeLists.txt +++ b/tools/perform/CMakeLists.txt @@ -22,7 +22,7 @@ set (h5perf_serial_SRCS ) add_executable (h5perf_serial ${h5perf_serial_SRCS}) TARGET_NAMING (h5perf_serial ${LIB_TYPE}) -TARGET_C_PROPERTIES (h5perf_serial " " " ") +TARGET_C_PROPERTIES (h5perf_serial ${LIB_TYPE} " " " ") target_link_libraries (h5perf_serial ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET}) set_target_properties (h5perf_serial PROPERTIES FOLDER perform) @@ -33,13 +33,13 @@ if (HDF5_BUILD_PERFORM_STANDALONE) ${HDF5_PERFORM_SOURCE_DIR}/sio_engine.c ) add_executable (h5perf_serial_alone ${h5perf_serial_alone_SRCS}) - set_property (TARGET h5perf_serial_alone - APPEND PROPERTY COMPILE_DEFINITIONS STANDALONE - ) TARGET_NAMING (h5perf_serial_alone ${LIB_TYPE}) - TARGET_C_PROPERTIES (h5perf_serial_alone " " " ") + TARGET_C_PROPERTIES (h5perf_serial_alone ${LIB_TYPE} " " " ") target_link_libraries (h5perf_serial_alone ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET}) set_target_properties (h5perf_serial_alone PROPERTIES FOLDER perform) + set_property (TARGET h5perf_serial_alone + APPEND PROPERTY COMPILE_DEFINITIONS STANDALONE + ) endif (HDF5_BUILD_PERFORM_STANDALONE) #-- Adding test for chunk @@ -48,7 +48,7 @@ set (chunk_SRCS ) ADD_EXECUTABLE(chunk ${chunk_SRCS}) TARGET_NAMING (chunk ${LIB_TYPE}) -TARGET_C_PROPERTIES (chunk " " " ") +TARGET_C_PROPERTIES (chunk ${LIB_TYPE} " " " ") TARGET_LINK_LIBRARIES(chunk ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET}) set_target_properties (chunk PROPERTIES FOLDER perform) @@ -58,7 +58,7 @@ set (iopipe_SRCS ) add_executable (iopipe ${iopipe_SRCS}) TARGET_NAMING (iopipe ${LIB_TYPE}) -TARGET_C_PROPERTIES (iopipe " " " ") +TARGET_C_PROPERTIES (iopipe ${LIB_TYPE} " " " ") target_link_libraries (iopipe ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET}) set_target_properties (iopipe PROPERTIES FOLDER perform) @@ -68,7 +68,7 @@ set (overhead_SRCS ) add_executable (overhead ${overhead_SRCS}) TARGET_NAMING (overhead ${LIB_TYPE}) -TARGET_C_PROPERTIES (overhead " " " ") +TARGET_C_PROPERTIES (overhead ${LIB_TYPE} " " " ") target_link_libraries (overhead ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET}) set_target_properties (overhead PROPERTIES FOLDER perform) @@ -79,7 +79,7 @@ if (BUILD_TESTING) ) add_executable (perf_meta ${perf_meta_SRCS}) TARGET_NAMING (perf_meta ${LIB_TYPE}) - TARGET_C_PROPERTIES (perf_meta " " " ") + TARGET_C_PROPERTIES (perf_meta ${LIB_TYPE} " " " ") target_link_libraries (perf_meta ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET}) set_target_properties (perf_meta PROPERTIES FOLDER perform) endif (BUILD_TESTING) @@ -90,7 +90,7 @@ set (zip_perf_SRCS ) add_executable (zip_perf ${zip_perf_SRCS}) TARGET_NAMING (zip_perf ${LIB_TYPE}) -TARGET_C_PROPERTIES (zip_perf " " " ") +TARGET_C_PROPERTIES (zip_perf ${LIB_TYPE} " " " ") target_link_libraries (zip_perf ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) set_target_properties (zip_perf PROPERTIES FOLDER perform) @@ -102,7 +102,7 @@ if (H5_HAVE_PARALLEL AND BUILD_TESTING) ) add_executable (h5perf ${h5perf_SRCS}) TARGET_NAMING (h5perf ${LIB_TYPE}) - TARGET_C_PROPERTIES (h5perf " " " ") + TARGET_C_PROPERTIES (h5perf ${LIB_TYPE} " " " ") target_link_libraries (h5perf ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET}) set_target_properties (h5perf PROPERTIES FOLDER perform) @@ -113,13 +113,13 @@ if (H5_HAVE_PARALLEL AND BUILD_TESTING) ${HDF5_PERFORM_SOURCE_DIR}/pio_engine.c ) add_executable (h5perf_alone ${h5perf_alone_SRCS}) - set_property (TARGET h5perf_alone - APPEND PROPERTY COMPILE_DEFINITIONS STANDALONE - ) TARGET_NAMING (h5perf_alone ${LIB_TYPE}) - TARGET_C_PROPERTIES (h5perf_alone " " " ") + TARGET_C_PROPERTIES (h5perf_alone ${LIB_TYPE} " " " ") target_link_libraries (h5perf_alone ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET}) set_target_properties (h5perf_alone PROPERTIES FOLDER perform) + set_property (TARGET h5perf_alone + APPEND PROPERTY COMPILE_DEFINITIONS STANDALONE + ) endif (HDF5_BUILD_PERFORM_STANDALONE) endif (H5_HAVE_PARALLEL AND BUILD_TESTING) diff --git a/tools/perform/Makefile.in b/tools/perform/Makefile.in index 1f903c5..325bc4d 100644 --- a/tools/perform/Makefile.in +++ b/tools/perform/Makefile.in @@ -445,7 +445,6 @@ AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@ AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@ AM_MAKEFLAGS = @AM_MAKEFLAGS@ AR = @AR@ -AS = @AS@ AUTOCONF = @AUTOCONF@ AUTOHEADER = @AUTOHEADER@ AUTOMAKE = @AUTOMAKE@ @@ -477,7 +476,6 @@ DIRECT_VFD = @DIRECT_VFD@ DLLTOOL = @DLLTOOL@ DSYMUTIL = @DSYMUTIL@ DUMPBIN = @DUMPBIN@ -DYNAMIC_DIRS = @DYNAMIC_DIRS@ ECHO_C = @ECHO_C@ ECHO_N = @ECHO_N@ ECHO_T = @ECHO_T@ @@ -496,17 +494,14 @@ FCFLAGS_f90 = @FCFLAGS_f90@ FCLIBS = @FCLIBS@ FC_VERSION = @FC_VERSION@ FGREP = @FGREP@ -FILTERS = @FILTERS@ FSEARCH_DIRS = @FSEARCH_DIRS@ GREP = @GREP@ H5_CFLAGS = @H5_CFLAGS@ H5_CPPFLAGS = @H5_CPPFLAGS@ H5_CXXFLAGS = @H5_CXXFLAGS@ -H5_CXX_SHARED = @H5_CXX_SHARED@ H5_FCFLAGS = @H5_FCFLAGS@ H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@ H5_LDFLAGS = @H5_LDFLAGS@ -H5_LONE_COLON = @H5_LONE_COLON@ H5_VERSION = @H5_VERSION@ HADDR_T = @HADDR_T@ HAVE_DMALLOC = @HAVE_DMALLOC@ @@ -569,7 +564,6 @@ R_INTEGER = @R_INTEGER@ R_LARGE = @R_LARGE@ SEARCH = @SEARCH@ SED = @SED@ -SETX = @SETX@ SET_MAKE = @SET_MAKE@ SHELL = @SHELL@ SIZE_T = @SIZE_T@ @@ -584,10 +578,6 @@ TR = @TR@ TRACE_API = @TRACE_API@ UNAME_INFO = @UNAME_INFO@ USE_FILTER_DEFLATE = @USE_FILTER_DEFLATE@ -USE_FILTER_FLETCHER32 = @USE_FILTER_FLETCHER32@ -USE_FILTER_NBIT = @USE_FILTER_NBIT@ -USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@ -USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@ USE_FILTER_SZIP = @USE_FILTER_SZIP@ USINGMEMCHECKER = @USINGMEMCHECKER@ VERSION = @VERSION@ diff --git a/tools/perform/chunk.c b/tools/perform/chunk.c index a3c11c1..6825a4c 100644 --- a/tools/perform/chunk.c +++ b/tools/perform/chunk.c @@ -57,20 +57,20 @@ #define RM_CACHE_STRT 25 #define RM_CACHE_END 25 #define RM_CACHE_DELT 5 -#define RM_START 0.50 -#define RM_END 5.00 -#define RM_DELTA 0.50 -#define RM_W0 0.0 +#define RM_START 0.50F +#define RM_END 5.00F +#define RM_DELTA 0.50F +#define RM_W0 0.0F #define RM_NRDCC 521 /* Diagonal test */ #define DIAG_CACHE_STRT 25 #define DIAG_CACHE_END 25 #define DIAG_CACHE_DELT 5 -#define DIAG_START 0.50 -#define DIAG_END 5.00 -#define DIAG_DELTA 0.50 -/* #define DIAG_W0 0.65 */ +#define DIAG_START 0.50F +#define DIAG_END 5.00F +#define DIAG_DELTA 0.50F +/* #define DIAG_W0 0.65F */ /* #define DIAG_NRDCC 521 */ static size_t nio_g; diff --git a/tools/perform/iopipe.c b/tools/perform/iopipe.c index 85063fa..a04ef82 100644 --- a/tools/perform/iopipe.c +++ b/tools/perform/iopipe.c @@ -81,25 +81,25 @@ print_stats (const char *prefix, double u_time, s_time; u_time = ((double)(r_stop->ru_utime.tv_sec)+ - (double)(r_stop->ru_utime.tv_usec)/1000000.0) - + (double)(r_stop->ru_utime.tv_usec)/1000000.0F) - ((double)(r_start->ru_utime.tv_sec)+ - (double)(r_start->ru_utime.tv_usec)/1000000.0); + (double)(r_start->ru_utime.tv_usec)/1000000.0F); s_time = ((double)(r_stop->ru_stime.tv_sec)+ - (double)(r_stop->ru_stime.tv_usec)/1000000.0) - + (double)(r_stop->ru_stime.tv_usec)/1000000.0F) - ((double)(r_start->ru_stime.tv_sec)+ - (double)(r_start->ru_stime.tv_usec)/1000000.0); + (double)(r_start->ru_stime.tv_usec)/1000000.0F); #endif #ifndef H5_HAVE_SYS_TIMEB e_time = ((double)(t_stop->tv_sec)+ - (double)(t_stop->tv_usec)/1000000.0) - + (double)(t_stop->tv_usec)/1000000.0F) - ((double)(t_start->tv_sec)+ - (double)(t_start->tv_usec)/1000000.0); + (double)(t_start->tv_usec)/1000000.0F); #else e_time = ((double)(t_stop->tv_sec)+ - (double)(t_stop->tv_usec)/1000.0) - + (double)(t_stop->tv_usec)/1000.0F) - ((double)(t_start->tv_sec)+ - (double)(t_start->tv_usec)/1000.0); + (double)(t_start->tv_usec)/1000.0F); #endif bw = (double)nbytes / e_time; @@ -191,7 +191,7 @@ main (void) * 1998-11-06 ptl */ printf ("I/O request size is %1.1fMB\n", - (double)(hssize_t)(size[0]*size[1])/1024.0*1024); + (double)(hssize_t)(size[0]*size[1])/1024.0F*1024); /* Open the files */ file = H5Fcreate (HDF5_FILE_NAME, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); diff --git a/tools/perform/overhead.c b/tools/perform/overhead.c index 9341e64..046668f 100644 --- a/tools/perform/overhead.c +++ b/tools/perform/overhead.c @@ -209,7 +209,7 @@ test(fill_t fill_style, const double splits[], if((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) goto error; if(!use_rdcc) { if(H5Pget_cache(fapl, &mdc_nelmts, NULL, NULL, NULL) < 0) goto error; - if(H5Pset_cache(fapl, mdc_nelmts, 0, 0, 0.0) < 0) goto error; + if(H5Pset_cache(fapl, mdc_nelmts, 0, 0, 0.0F) < 0) goto error; } if((file = H5Fcreate(FILE_NAME_1, H5F_ACC_TRUNC, H5P_DEFAULT, fapl)) < 0) goto error; if((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0) goto error; diff --git a/tools/perform/sio_perf.c b/tools/perform/sio_perf.c index 1828d6f..7d75a2d 100644 --- a/tools/perform/sio_perf.c +++ b/tools/perform/sio_perf.c @@ -68,7 +68,7 @@ #define SIO_HDF5 0x4 /* report 0.0 in case t is zero too */ -#define MB_PER_SEC(bytes,t) (((t)==0.0) ? 0.0 : ((((double)bytes) / ONE_MB) / (t))) +#define MB_PER_SEC(bytes,t) (((t)==0.0F) ? 0.0F : ((((double)bytes) / ONE_MB) / (t))) #ifndef TRUE #define TRUE 1 @@ -451,14 +451,14 @@ run_test(iotype iot, parameters parms, struct options *opts) minmax *read_mm_table=NULL; minmax *read_gross_mm_table=NULL; minmax *read_raw_mm_table=NULL; - minmax write_sys_mm = {0.0, 0.0, 0.0, 0}; - minmax write_mm = {0.0, 0.0, 0.0, 0}; - minmax write_gross_mm = {0.0, 0.0, 0.0, 0}; - minmax write_raw_mm = {0.0, 0.0, 0.0, 0}; - minmax read_sys_mm = {0.0, 0.0, 0.0, 0}; - minmax read_mm = {0.0, 0.0, 0.0, 0}; - minmax read_gross_mm = {0.0, 0.0, 0.0, 0}; - minmax read_raw_mm = {0.0, 0.0, 0.0, 0}; + minmax write_sys_mm = {0.0F, 0.0F, 0.0F, 0}; + minmax write_mm = {0.0F, 0.0F, 0.0F, 0}; + minmax write_gross_mm = {0.0F, 0.0F, 0.0F, 0}; + minmax write_raw_mm = {0.0F, 0.0F, 0.0F, 0}; + minmax read_sys_mm = {0.0F, 0.0F, 0.0F, 0}; + minmax read_mm = {0.0F, 0.0F, 0.0F, 0}; + minmax read_gross_mm = {0.0F, 0.0F, 0.0F, 0}; + minmax read_raw_mm = {0.0F, 0.0F, 0.0F, 0}; raw_size = (off_t)parms.num_bytes; parms.io_type = iot; @@ -717,7 +717,7 @@ accumulate_minmax_stuff(minmax *mm, int count) int i; minmax total_mm; - total_mm.sum = 0.0; + total_mm.sum = 0.0F; total_mm.max = -DBL_MAX; total_mm.min = DBL_MAX; total_mm.num = count; diff --git a/tools/perform/zip_perf.c b/tools/perform/zip_perf.c index edd5b0f..f73ba40 100644 --- a/tools/perform/zip_perf.c +++ b/tools/perform/zip_perf.c @@ -43,10 +43,10 @@ #define ONE_MB (ONE_KB * ONE_KB) #define ONE_GB (ONE_MB * ONE_KB) -#define MICROSECOND 1000000.0 +#define MICROSECOND 1000000.0F /* report 0.0 in case t is zero too */ -#define MB_PER_SEC(bytes,t) ((fabs(t)<0.0000000001) ? 0.0 : ((((double)bytes) / ONE_MB) / (t))) +#define MB_PER_SEC(bytes,t) ((fabs(t)<0.0000000001F) ? 0.0F : ((((double)bytes) / ONE_MB) / (t))) #ifndef TRUE #define TRUE 1 @@ -182,7 +182,7 @@ write_file(Bytef *source, uLongf sourceLen) /* destination buffer needs to be at least 0.1% larger than sourceLen * plus 12 bytes */ - destLen = (uLongf)((double)sourceLen + ((double)sourceLen * 0.1)) + 12; + destLen = (uLongf)((double)sourceLen + ((double)sourceLen * 0.1F)) + 12; dest = (Bytef *)HDmalloc(destLen); if (!dest) @@ -464,7 +464,7 @@ do_write_test(unsigned long file_size, unsigned long min_buf_size, error("out of memory"); } - compression_time = 0.0; + compression_time = 0.0F; if (random_test) fill_with_random_data(src, src_len); |