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authorKimmy Mu <kmu@hdfgroup.org>2020-01-29 20:12:18 (GMT)
committerKimmy Mu <kmu@hdfgroup.org>2020-01-29 20:12:18 (GMT)
commit8c60f6264c46cd9155ce34e12e29e9b0272c0c67 (patch)
tree4ee7db9cfd3ff489825e82a23b6e010245fe4183 /tools
parent91d29817413e00f1dcd006d13790df6ce7aeb5c0 (diff)
parent781fa57f6ee816e037dd12fff02d37ff7ec9c2b1 (diff)
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Merge pull request #2324 in HDFFV/hdf5 from ~KMU/hdf5:hdf5_1_12 to hdf5_1_12
* commit '781fa57f6ee816e037dd12fff02d37ff7ec9c2b1': pick up missing piece from merge Merge pull request #2311 in HDFFV/hdf5 from ~KMU/hdf5:misc to develop remove redundent definition Merge pull request #2311 in HDFFV/hdf5 from ~KMU/hdf5:misc to develop Merge pull request #2311 in HDFFV/hdf5 from ~KMU/hdf5:misc to develop Merge pull request #2315 in HDFFV/hdf5 from ~KMU/hdf5:develop to develop missing prototype warning prototype issue Merge pull request #2306 in HDFFV/hdf5 from ~KMU/hdf5:develop to develop Merge pull request #2300 in HDFFV/hdf5 from ~KMU/hdf5:squashed_cast to develop Merge pull request #2291 in HDFFV/hdf5 from ~KMU/hdf5:bugfix/uninitialized to develop Merge pull request #2295 in HDFFV/hdf5 from ~KMU/hdf5:bugfix/float to develop Merge pull request #2292 in HDFFV/hdf5 from ~KMU/hdf5:bugfix/prototype to develop Merge pull request #2094 in HDFFV/hdf5 from ~KMU/hdf5:bugfix/unused to develop
Diffstat (limited to 'tools')
-rw-r--r--tools/lib/h5diff.c8
-rw-r--r--tools/lib/h5diff_array.c6
-rw-r--r--tools/lib/h5tools_dump.c2
-rw-r--r--tools/src/h5diff/ph5diff_main.c2
-rw-r--r--tools/src/h5dump/h5dump_xml.c5
-rw-r--r--tools/src/h5import/h5import.c8
-rw-r--r--tools/src/h5ls/h5ls.c16
-rw-r--r--tools/src/h5repack/h5repack_main.c2
-rw-r--r--tools/src/h5repack/h5repack_parse.c2
-rw-r--r--tools/src/misc/h5clear.c2
-rw-r--r--tools/test/h5copy/h5copygentest.c8
-rw-r--r--tools/test/h5diff/h5diffgentest.c16
-rw-r--r--tools/test/h5dump/h5dumpgentest.c233
-rw-r--r--tools/test/h5repack/h5repackgentest.c21
-rw-r--r--tools/test/h5repack/h5repacktst.c12
-rw-r--r--tools/test/perform/chunk_cache.c11
-rw-r--r--tools/test/perform/iopipe.c36
-rw-r--r--tools/test/perform/perf.c34
-rw-r--r--tools/test/perform/pio_engine.c342
-rw-r--r--tools/test/perform/pio_perf.c56
20 files changed, 426 insertions, 396 deletions
diff --git a/tools/lib/h5diff.c b/tools/lib/h5diff.c
index 8c434ac..86726b4 100644
--- a/tools/lib/h5diff.c
+++ b/tools/lib/h5diff.c
@@ -1048,7 +1048,7 @@ diff_match(hid_t file1_id, const char *grp1, trav_info_t *info1,
*/
#ifdef H5_HAVE_PARALLEL
{
- char *workerTasks = (char*)HDmalloc((g_nTasks - 1) * sizeof(char));
+ char *workerTasks = (char*)HDmalloc((size_t)(g_nTasks - 1) * sizeof(char));
int n;
int busyTasks = 0;
struct diffs_found nFoundbyWorker;
@@ -1057,7 +1057,7 @@ diff_match(hid_t file1_id, const char *grp1, trav_info_t *info1,
MPI_Status Status;
/*set all tasks as free */
- HDmemset(workerTasks, 1, (g_nTasks - 1));
+ HDmemset(workerTasks, 1, (size_t)(g_nTasks - 1) * sizeof(char));
#endif
for(i = 0; i < table->nobjs; i++) {
@@ -1345,8 +1345,8 @@ diff_match(hid_t file1_id, const char *grp1, trav_info_t *info1,
} /* end else */
} /* end while */
- for(i = 1; i < g_nTasks; i++)
- MPI_Send(NULL, 0, MPI_BYTE, i, MPI_TAG_END, MPI_COMM_WORLD);
+ for(i = 1; (int)i < g_nTasks; i++)
+ MPI_Send(NULL, 0, MPI_BYTE, (int)i, MPI_TAG_END, MPI_COMM_WORLD);
/* Print any final data waiting in our queue */
print_incoming_data();
diff --git a/tools/lib/h5diff_array.c b/tools/lib/h5diff_array.c
index 088e230..6cfe3d2 100644
--- a/tools/lib/h5diff_array.c
+++ b/tools/lib/h5diff_array.c
@@ -4559,7 +4559,7 @@ static hbool_t equal_double(double value, double expected, diff_opt_t *opts) {
return FALSE;
}
- if (value == expected)
+ if (H5_DBL_ABS_EQUAL(value, expected))
return TRUE;
if (opts->use_system_epsilon)
@@ -4603,7 +4603,7 @@ hbool_t equal_ldouble(long double value, long double expected, diff_opt_t *opts)
return FALSE;
}
- if (value == expected)
+ if (H5_LDBL_ABS_EQUAL(value, expected))
return TRUE;
if (opts->use_system_epsilon)
@@ -4645,7 +4645,7 @@ static hbool_t equal_float(float value, float expected, diff_opt_t *opts) {
return FALSE;
}
- if (value == expected)
+ if (H5_FLT_ABS_EQUAL(value, expected))
return TRUE;
if (opts->use_system_epsilon)
diff --git a/tools/lib/h5tools_dump.c b/tools/lib/h5tools_dump.c
index d6d94a6..3cca910 100644
--- a/tools/lib/h5tools_dump.c
+++ b/tools/lib/h5tools_dump.c
@@ -3317,7 +3317,7 @@ h5tools_dump_dcpl(FILE *stream, const h5tool_format_t *info,
if (vmaps) {
size_t next;
- ssize_t ssize_out;
+ ssize_t H5_ATTR_NDEBUG_UNUSED ssize_out;
ctx->indent_level++;
for (next = 0; next < (unsigned) vmaps; next++) {
diff --git a/tools/src/h5diff/ph5diff_main.c b/tools/src/h5diff/ph5diff_main.c
index 5ba5fb3..c473c8b 100644
--- a/tools/src/h5diff/ph5diff_main.c
+++ b/tools/src/h5diff/ph5diff_main.c
@@ -166,7 +166,7 @@ ph5diff_worker(int nID)
{
struct diff_mpi_args args;
struct diffs_found diffs;
- int i;
+ unsigned i;
/* Make certain we've received the filenames and opened the files already */
if(file1_id < 0 || file2_id < 0)
diff --git a/tools/src/h5dump/h5dump_xml.c b/tools/src/h5dump/h5dump_xml.c
index 7a3ad80..d9f1f67 100644
--- a/tools/src/h5dump/h5dump_xml.c
+++ b/tools/src/h5dump/h5dump_xml.c
@@ -1798,12 +1798,7 @@ xml_dump_data(hid_t obj_id, int obj_data, struct subset_t H5_ATTR_UNUSED *sset,
hid_t space = H5I_INVALID_HID;
hid_t type = H5I_INVALID_HID;
hid_t p_type = H5I_INVALID_HID;
- hsize_t size[64];
- hsize_t nelmts = 1;
- int ndims;
- int i;
int status = -1;
- void *buf = NULL;
hsize_t curr_pos = 0; /* total data element position */
h5tools_str_t buffer; /* string into which to render */
h5tools_context_t ctx; /* print context */
diff --git a/tools/src/h5import/h5import.c b/tools/src/h5import/h5import.c
index 81f9a32..00fe7cf 100644
--- a/tools/src/h5import/h5import.c
+++ b/tools/src/h5import/h5import.c
@@ -4725,15 +4725,15 @@ uint32_t swap_uint32(uint32_t val)
int32_t swap_int32(int32_t val)
{
- val = ((val << 8) & 0xFF00FF00) | ((val >> 8) & 0xFF00FF);
+ val = (int32_t)(((uint32_t)(val << 8) & 0xFF00FF00) | ((val >> 8) & 0xFF00FF));
return (val << 16) | ((val >> 16) & 0xFFFF);
}
int64_t swap_int64(int64_t val)
{
- val = ((val << 8) & 0xFF00FF00FF00FF00ULL) | ((val >> 8) & 0x00FF00FF00FF00FFULL);
- val = ((val << 16) & 0xFFFF0000FFFF0000ULL) | ((val >> 16) & 0x0000FFFF0000FFFFULL);
- return (val << 32) | ((val >> 32) & 0xFFFFFFFFULL);
+ val = (int64_t)(((uint64_t)(val << 8) & 0xFF00FF00FF00FF00ULL) | ((uint64_t)(val >> 8) & 0x00FF00FF00FF00FFULL));
+ val = (int64_t)(((uint64_t)(val << 16) & 0xFFFF0000FFFF0000ULL) | ((uint64_t)(val >> 16) & 0x0000FFFF0000FFFFULL));
+ return (int64_t)((uint64_t)(val << 32) | ((uint64_t)(val >> 32) & 0xFFFFFFFFULL));
}
uint64_t swap_uint64(uint64_t val)
diff --git a/tools/src/h5ls/h5ls.c b/tools/src/h5ls/h5ls.c
index 279a598..f3f9ede 100644
--- a/tools/src/h5ls/h5ls.c
+++ b/tools/src/h5ls/h5ls.c
@@ -1302,7 +1302,7 @@ dump_reference(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx
hid_t new_obj_sid = H5I_INVALID_HID;
hsize_t elmt_counter = 0; /*counts the # elements printed. */
size_t ncols = 80; /* available output width */
- size_t i;
+ int i;
hsize_t curr_pos = 0; /* total data element position */
h5tools_str_t buffer; /* string into which to render */
h5tools_context_t datactx; /* print context */
@@ -1312,7 +1312,7 @@ dump_reference(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx
datactx = *ctx; /* print context */
/* Assume entire data space to be printed */
if (datactx.ndims > 0)
- for (i = 0; i < (size_t)datactx.ndims; i++)
+ for (i = 0; (unsigned)i < datactx.ndims; i++)
datactx.p_min_idx[i] = 0;
datactx.need_prefix = TRUE;
@@ -1447,13 +1447,13 @@ dump_reference(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx
/* Print point information */
H5TOOLS_DEBUG("H5S_SEL_POINTS H5R_DATASET_REGION2");
h5tools_dump_region_data_points(new_obj_sid, new_obj_id, stream, info, &datactx,
- &buffer, &curr_pos, ncols, i, elmt_counter);
+ &buffer, &curr_pos, ncols, (hsize_t)i, elmt_counter);
}
else if(region_type == H5S_SEL_HYPERSLABS) {
/* Print block information */
H5TOOLS_DEBUG("H5S_SEL_HYPERSLABS H5R_DATASET_REGION2");
h5tools_dump_region_data_blocks(new_obj_sid, new_obj_id, stream, info, &datactx,
- &buffer, &curr_pos, ncols, i, elmt_counter);
+ &buffer, &curr_pos, ncols, (hsize_t)i, elmt_counter);
}
else
H5TOOLS_INFO("invalid region type");
@@ -1656,7 +1656,7 @@ dump_dataset_values(hid_t dset)
init_acc_pos(&ctx, total_size);
ctx.need_prefix = TRUE;
- if (NULL != (ref_buf = (H5R_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(H5R_ref_t)), ndims))) {
+ if (NULL != (ref_buf = (H5R_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(H5R_ref_t)), (size_t)ndims))) {
H5TOOLS_DEBUG("H5Dread reference read");
if(H5Dread(dset, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, ref_buf) < 0) {
HDfree(ref_buf);
@@ -1695,7 +1695,7 @@ done:
*-------------------------------------------------------------------------
*/
static void
-dump_attribute_values(hid_t attr, const char *attr_name)
+dump_attribute_values(hid_t attr)
{
hid_t f_type = H5I_INVALID_HID;
hid_t space = H5I_INVALID_HID;
@@ -1827,7 +1827,7 @@ dump_attribute_values(hid_t attr, const char *attr_name)
init_acc_pos(&ctx, total_size);
ctx.need_prefix = TRUE;
- if (NULL != (ref_buf = (H5R_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(H5R_ref_t)), ndims))) {
+ if (NULL != (ref_buf = (H5R_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(H5R_ref_t)), (size_t)ndims))) {
H5TOOLS_DEBUG("H5Aread reference read");
if(H5Aread(attr, H5T_STD_REF, ref_buf) < 0) {
HDfree(ref_buf);
@@ -1955,7 +1955,7 @@ list_attr(hid_t obj, const char *attr_name, const H5A_info_t H5_ATTR_UNUSED *ain
h5tools_str_close(&buffer);
if (data_g)
- dump_attribute_values(attr, attr_name);
+ dump_attribute_values(attr);
H5Aclose(attr);
}
else {
diff --git a/tools/src/h5repack/h5repack_main.c b/tools/src/h5repack/h5repack_main.c
index df8c7ef..ea6b0e1 100644
--- a/tools/src/h5repack/h5repack_main.c
+++ b/tools/src/h5repack/h5repack_main.c
@@ -280,7 +280,7 @@ int read_info(const char *filename, pack_opt_t *options)
char comp_info[1024];
FILE *fp = NULL;
char c;
- int i, rc = 1;
+ int i;
int ret_value = EXIT_SUCCESS;
if (NULL == (fp = HDfopen(filename, "r"))) {
diff --git a/tools/src/h5repack/h5repack_parse.c b/tools/src/h5repack/h5repack_parse.c
index 03fcf0e..95cacc1 100644
--- a/tools/src/h5repack/h5repack_parse.c
+++ b/tools/src/h5repack/h5repack_parse.c
@@ -228,7 +228,7 @@ obj_list_t* parse_filter(const char *str, unsigned *n_objs, filter_info_t *filt,
l = 0;
}
else if (f == -1) {
- filt->filt_flag = HDstrtoul(stype, NULL, 0);
+ filt->filt_flag = (unsigned)HDstrtoul(stype, NULL, 0);
f = 0;
}
else if (p == -1) {
diff --git a/tools/src/misc/h5clear.c b/tools/src/misc/h5clear.c
index 927167b..38fa6a2 100644
--- a/tools/src/misc/h5clear.c
+++ b/tools/src/misc/h5clear.c
@@ -175,7 +175,7 @@ parse_command_line(int argc, const char **argv)
usage(h5tools_getprogname());
goto done;
}
- increment = HDatoi(opt_arg);
+ increment = (hsize_t)HDatoi(opt_arg);
}
break;
diff --git a/tools/test/h5copy/h5copygentest.c b/tools/test/h5copy/h5copygentest.c
index 716b0d2..2a8a575 100644
--- a/tools/test/h5copy/h5copygentest.c
+++ b/tools/test/h5copy/h5copygentest.c
@@ -744,9 +744,9 @@ static void Test_Obj_Copy(void)
/* Set the FAPL for the type of format */
/* Create source file */
if(new_format)
- fid = H5Fcreate(HDF_FILE1, H5F_ACC_TRUNC, H5P_DEFAULT, fapl_new);
- else
- fid = H5Fcreate(HDF_FILE1_NEW, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ fid = H5Fcreate(HDF_FILE1, H5F_ACC_TRUNC, H5P_DEFAULT, fapl_new);
+ else
+ fid = H5Fcreate(HDF_FILE1_NEW, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
if(fid < 0) {
HDfprintf(stderr, "Error: H5Fcreate failed.\n");
goto out;
@@ -756,7 +756,7 @@ static void Test_Obj_Copy(void)
gent_empty_group(fid);
gent_nested_datasets(fid);
gent_nested_group(fid);
- gent_att_compound_vlstr(fid);
+ gent_att_compound_vlstr(fid);
H5Fclose(fid);
fid = (-1);
diff --git a/tools/test/h5diff/h5diffgentest.c b/tools/test/h5diff/h5diffgentest.c
index 05bad77..98001ff 100644
--- a/tools/test/h5diff/h5diffgentest.c
+++ b/tools/test/h5diff/h5diffgentest.c
@@ -4227,7 +4227,7 @@ static void test_comps_array(const char *fname, const char *dset, const char *at
hsize_t sdims_dset[] = { SDIM_DSET };
hsize_t sdims_cmpd_arry[] = { SDIM_CMPD_ARRAY };
int i, j;
- herr_t ret; /* Generic return value */
+ herr_t H5_ATTR_NDEBUG_UNUSED ret; /* Generic return value */
/* Initialize array data to write */
for (i = 0; i < SDIM_DSET; i++) {
@@ -4336,7 +4336,7 @@ static void test_comps_vlen(const char * fname, const char *dset, const char *at
hsize_t sdims_dset[] = { SDIM_DSET };
unsigned i, j; /* counting variables */
- herr_t ret; /* Generic return value */
+ herr_t H5_ATTR_NDEBUG_UNUSED ret; /* Generic return value */
/* Allocate and initialize VL data to write */
for (i = 0; i < SDIM_DSET; i++) {
@@ -4454,7 +4454,7 @@ static void test_comps_array_vlen(const char * fname, const char *dset, const ch
hsize_t sdims_dset[] = { SDIM_DSET };
hsize_t sdims_arry[] = { SDIM_CMPD_ARRAY };
unsigned i, j, k; /* counting variables */
- herr_t ret; /* Generic return value */
+ herr_t H5_ATTR_NDEBUG_UNUSED ret; /* Generic return value */
/* Initialize array data to write in compound1 */
for (i = 0; i < SDIM_DSET; i++) {
@@ -4597,7 +4597,7 @@ static void test_comps_vlen_arry(const char * fname, const char *dset, const cha
hsize_t sdims_cmpd_arry[] = { SDIM_CMPD_ARRAY };
unsigned i, j, k; /* counting variables */
- herr_t ret; /* Generic return value */
+ herr_t H5_ATTR_NDEBUG_UNUSED ret; /* Generic return value */
/* Allocate and initialize VL data to write */
for (i = 0; i < SDIM_DSET; i++) {
@@ -5214,7 +5214,7 @@ void write_attr_strings(hid_t loc_id, const char* dset_name, hid_t fid, int make
hid_t aid = H5I_INVALID_HID;
hid_t sid = H5I_INVALID_HID;
hid_t tid = H5I_INVALID_HID;
- herr_t status;
+ herr_t H5_ATTR_NDEBUG_UNUSED status;
int val, i, j, k, l, n;
float f;
@@ -6205,7 +6205,7 @@ void write_attr_in(hid_t loc_id, const char* dset_name, hid_t fid, int make_diff
hid_t aid = H5I_INVALID_HID;
hid_t sid = H5I_INVALID_HID;
hid_t tid = H5I_INVALID_HID;
- herr_t status;
+ herr_t H5_ATTR_NDEBUG_UNUSED status;
int val, i, j, k, l, n;
float f;
@@ -7197,7 +7197,7 @@ void write_dset_in(hid_t loc_id, const char* dset_name, hid_t fid, int make_diff
hid_t sid = H5I_INVALID_HID;
hid_t tid = H5I_INVALID_HID;
hid_t dcpl = H5I_INVALID_HID;
- herr_t status;
+ herr_t H5_ATTR_NDEBUG_UNUSED status;
int val, i, j, k, l, n;
float f;
int fillvalue = 2;
@@ -7832,7 +7832,7 @@ void gen_datareg(hid_t fid, int make_diffs /* flag to modify data buffers */)
hsize_t start[10]; /* starting location of hyperslab */
hsize_t count[10]; /* element count of hyperslab */
hsize_t coord[5][2]; /* coordinates for point selection */
- herr_t status;
+ herr_t H5_ATTR_NDEBUG_UNUSED status;
int i;
/* allocate the buffer for write the references */
diff --git a/tools/test/h5dump/h5dumpgentest.c b/tools/test/h5dump/h5dumpgentest.c
index a686660..026ab20 100644
--- a/tools/test/h5dump/h5dumpgentest.c
+++ b/tools/test/h5dump/h5dumpgentest.c
@@ -1554,7 +1554,7 @@ gent_many(void)
dset1_t dset1[6];
hsize_t dim[4];
- herr_t ret;
+ herr_t H5_ATTR_NDEBUG_UNUSED ret;
fid = H5Fcreate(FILE12, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
@@ -2603,7 +2603,7 @@ static void gent_vldatatypes(void)
hid_t file, dset, space, type;
hsize_t dims[] = { SPACE1_DIM1 };
int i;
- herr_t ret=0;
+ herr_t H5_ATTR_NDEBUG_UNUSED ret=0;
file = H5Fcreate(FILE21, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
@@ -2698,7 +2698,7 @@ gent_vldatatypes2(void)
hid_t tid1, tid2; /* Datatype IDs */
hsize_t dims1[] = {SPACE1_DIM1};
unsigned i,j,k; /* counting variables */
- herr_t ret; /* Generic return value */
+ herr_t H5_ATTR_NDEBUG_UNUSED ret; /* Generic return value */
/* Allocate and initialize VL data to write */
for(i = 0; i < SPACE1_DIM1; i++) {
@@ -2771,7 +2771,7 @@ static void gent_vldatatypes3(void)
hid_t tid1, tid2; /* Datatype IDs */
hsize_t dims1[] = {SPACE1_DIM1};
unsigned i,j; /* counting variables */
- herr_t ret; /* Generic return value */
+ herr_t H5_ATTR_NDEBUG_UNUSED ret; /* Generic return value */
/* Allocate and initialize VL data to write */
for(i=0; i<SPACE1_DIM1; i++) {
@@ -2840,7 +2840,7 @@ static void gent_vldatatypes4(void)
hid_t tid1, tid2; /* Datatype IDs */
hsize_t dims1[] = {SPACE1_DIM1};
unsigned i,j; /* counting variables */
- herr_t ret; /* Generic return value */
+ herr_t H5_ATTR_NDEBUG_UNUSED ret; /* Generic return value */
/* Allocate and initialize VL data to write */
for(i=0; i<SPACE1_DIM1; i++) {
@@ -2897,14 +2897,14 @@ static void gent_vldatatypes4(void)
/* Generate a variable-length dataset with NULL values in it */
static void gent_vldatatypes5(void)
{
- hvl_t wdata [SPACE1_DIM1];
- hid_t fid1;
- hid_t dataset;
- hid_t sid1;
- hid_t tid1;
- hsize_t dims1[] = {SPACE1_DIM1};
- int i,j; /* counting variable */
- herr_t ret; /* Generic return value */
+ hvl_t wdata [SPACE1_DIM1];
+ hid_t fid1;
+ hid_t dataset;
+ hid_t sid1;
+ hid_t tid1;
+ hsize_t dims1[] = {SPACE1_DIM1};
+ int i,j; /* counting variable */
+ herr_t H5_ATTR_NDEBUG_UNUSED ret; /* Generic return value */
/* initialize data for dataset */
for(i=0; i<SPACE1_DIM1; i++) {
@@ -2966,16 +2966,15 @@ static void gent_vldatatypes5(void)
static void gent_array1_big(void)
{
- int *wdata; /* Information to write */
- hid_t fid1; /* HDF5 File IDs */
- hid_t dataset; /* Dataset ID */
- hid_t sid1; /* Dataspace ID */
- hid_t tid1; /* Datatype ID */
- hsize_t sdims1[] = {SPACE_ARRAY1BIG_DIM};
- hsize_t tdims1[] = {ARRAY1BIG_DIM};
- int i,j; /* counting variables */
- herr_t ret; /* Generic return value */
-
+ int *wdata; /* Information to write */
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t dataset; /* Dataset ID */
+ hid_t sid1; /* Dataspace ID */
+ hid_t tid1; /* Datatype ID */
+ hsize_t sdims1[] = {SPACE_ARRAY1BIG_DIM};
+ hsize_t tdims1[] = {ARRAY1BIG_DIM};
+ int i,j; /* counting variables */
+ herr_t H5_ATTR_NDEBUG_UNUSED ret; /* Generic return value */
/* for region reference dataset */
hid_t dset2;
@@ -3101,15 +3100,15 @@ static void gent_array1(void)
static void gent_array2(void)
{
- int wdata[SPACE1_DIM1][ARRAY2_DIM1][ARRAY2_DIM2][ARRAY2_DIM3]; /* Information to write */
- hid_t fid; /* HDF5 File IDs */
- hid_t dataset; /* Dataset ID */
- hid_t sid; /* Dataspace ID */
- hid_t tid; /* Datatype ID */
- hsize_t sdims1[] = {SPACE1_DIM1};
- hsize_t tdims2[] = {ARRAY2_DIM1,ARRAY2_DIM2,ARRAY2_DIM3};
- int i,j,k,l; /* counting variables */
- herr_t ret; /* Generic return value */
+ int wdata[SPACE1_DIM1][ARRAY2_DIM1][ARRAY2_DIM2][ARRAY2_DIM3]; /* Information to write */
+ hid_t fid; /* HDF5 File IDs */
+ hid_t dataset; /* Dataset ID */
+ hid_t sid; /* Dataspace ID */
+ hid_t tid; /* Datatype ID */
+ hsize_t sdims1[] = {SPACE1_DIM1};
+ hsize_t tdims2[] = {ARRAY2_DIM1,ARRAY2_DIM2,ARRAY2_DIM3};
+ int i,j,k,l; /* counting variables */
+ herr_t H5_ATTR_NDEBUG_UNUSED ret; /* Generic return value */
/* Allocate and initialize array data to write */
for(i=0; i<SPACE1_DIM1; i++)
@@ -3147,17 +3146,17 @@ static void gent_array2(void)
static void gent_array3(void)
{
- int wdata[SPACE1_DIM1][ARRAY1_DIM1][ARRAY3_DIM1][ARRAY3_DIM2]; /* Information to write */
- hid_t fid; /* HDF5 File IDs */
- hid_t dataset; /* Dataset ID */
- hid_t sid; /* Dataspace ID */
- hid_t tid1; /* 1-D array Datatype ID */
- hid_t tid2; /* 2-D array Datatype ID */
- hsize_t sdims1[] = {SPACE1_DIM1};
- hsize_t tdims1[] = {ARRAY1_DIM1};
- hsize_t tdims2[] = {ARRAY3_DIM1,ARRAY3_DIM2};
- int i,j,k,l; /* counting variables */
- herr_t ret; /* Generic return value */
+ int wdata[SPACE1_DIM1][ARRAY1_DIM1][ARRAY3_DIM1][ARRAY3_DIM2]; /* Information to write */
+ hid_t fid; /* HDF5 File IDs */
+ hid_t dataset; /* Dataset ID */
+ hid_t sid; /* Dataspace ID */
+ hid_t tid1; /* 1-D array Datatype ID */
+ hid_t tid2; /* 2-D array Datatype ID */
+ hsize_t sdims1[] = {SPACE1_DIM1};
+ hsize_t tdims1[] = {ARRAY1_DIM1};
+ hsize_t tdims2[] = {ARRAY3_DIM1,ARRAY3_DIM2};
+ int i,j,k,l; /* counting variables */
+ herr_t H5_ATTR_NDEBUG_UNUSED ret; /* Generic return value */
/* Allocate and initialize array data to write */
for(i=0; i<SPACE1_DIM1; i++)
@@ -3204,16 +3203,16 @@ static void gent_array4(void)
int i;
float f;
} s2_t;
- s2_t wdata[SPACE1_DIM1][ARRAY1_DIM1]; /* Information to write */
- hid_t fid1; /* HDF5 File IDs */
- hid_t dataset; /* Dataset ID */
- hid_t sid1; /* Dataspace ID */
- hid_t tid1; /* Array Datatype ID */
- hid_t tid2; /* Compound Datatype ID */
- hsize_t sdims1[] = {SPACE1_DIM1};
- hsize_t tdims1[] = {ARRAY1_DIM1};
- int i,j; /* counting variables */
- herr_t ret; /* Generic return value */
+ s2_t wdata[SPACE1_DIM1][ARRAY1_DIM1]; /* Information to write */
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t dataset; /* Dataset ID */
+ hid_t sid1; /* Dataspace ID */
+ hid_t tid1; /* Array Datatype ID */
+ hid_t tid2; /* Compound Datatype ID */
+ hsize_t sdims1[] = {SPACE1_DIM1};
+ hsize_t tdims1[] = {ARRAY1_DIM1};
+ int i,j; /* counting variables */
+ herr_t H5_ATTR_NDEBUG_UNUSED ret; /* Generic return value */
/* Initialize array data to write */
for(i=0; i<SPACE1_DIM1; i++)
@@ -3270,17 +3269,17 @@ static void gent_array5(void)
int i;
float f[ARRAY1_DIM1];
} s2_t;
- s2_t wdata[SPACE1_DIM1][ARRAY1_DIM1]; /* Information to write */
- hid_t fid1; /* HDF5 File IDs */
- hid_t dataset; /* Dataset ID */
- hid_t sid1; /* Dataspace ID */
- hid_t tid1; /* Array Datatype ID */
- hid_t tid2; /* Compound Datatype ID */
- hid_t tid3; /* Nested Array Datatype ID */
- hsize_t sdims1[] = {SPACE1_DIM1};
- hsize_t tdims1[] = {ARRAY1_DIM1};
- int i,j,k; /* counting variables */
- herr_t ret; /* Generic return value */
+ s2_t wdata[SPACE1_DIM1][ARRAY1_DIM1]; /* Information to write */
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t dataset; /* Dataset ID */
+ hid_t sid1; /* Dataspace ID */
+ hid_t tid1; /* Array Datatype ID */
+ hid_t tid2; /* Compound Datatype ID */
+ hid_t tid3; /* Nested Array Datatype ID */
+ hsize_t sdims1[] = {SPACE1_DIM1};
+ hsize_t tdims1[] = {ARRAY1_DIM1};
+ int i,j,k; /* counting variables */
+ herr_t H5_ATTR_NDEBUG_UNUSED ret; /* Generic return value */
/* Initialize array data to write */
for(i=0; i<SPACE1_DIM1; i++)
@@ -3341,16 +3340,16 @@ static void gent_array5(void)
static void gent_array6(void)
{
- hvl_t wdata[SPACE1_DIM1][ARRAY1_DIM1]; /* Information to write */
- hid_t fid1; /* HDF5 File IDs */
- hid_t dataset; /* Dataset ID */
- hid_t sid1; /* Dataspace ID */
- hid_t tid1; /* Array Datatype ID */
- hid_t tid2; /* VL Datatype ID */
- hsize_t sdims1[] = {SPACE1_DIM1};
- hsize_t tdims1[] = {ARRAY1_DIM1};
- int i,j,k; /* counting variables */
- herr_t ret; /* Generic return value */
+ hvl_t wdata[SPACE1_DIM1][ARRAY1_DIM1]; /* Information to write */
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t dataset; /* Dataset ID */
+ hid_t sid1; /* Dataspace ID */
+ hid_t tid1; /* Array Datatype ID */
+ hid_t tid2; /* VL Datatype ID */
+ hsize_t sdims1[] = {SPACE1_DIM1};
+ hsize_t tdims1[] = {ARRAY1_DIM1};
+ int i,j,k; /* counting variables */
+ herr_t H5_ATTR_NDEBUG_UNUSED ret; /* Generic return value */
/* Initialize array data to write */
for(i=0; i<SPACE1_DIM1; i++)
@@ -3401,17 +3400,17 @@ static void gent_array6(void)
static void gent_array7(void)
{
- hvl_t wdata[SPACE1_DIM1][ARRAY1_DIM1]; /* Information to write */
- hid_t fid1; /* HDF5 File IDs */
- hid_t dataset; /* Dataset ID */
- hid_t sid1; /* Dataspace ID */
- hid_t tid1; /* Array Datatype ID */
- hid_t tid2; /* VL Datatype ID */
- hid_t tid3; /* Nested Array Datatype ID */
- hsize_t sdims1[] = {SPACE1_DIM1};
- hsize_t tdims1[] = {ARRAY1_DIM1};
- int i,j,k,l; /* Index variables */
- herr_t ret; /* Generic return value */
+ hvl_t wdata[SPACE1_DIM1][ARRAY1_DIM1]; /* Information to write */
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t dataset; /* Dataset ID */
+ hid_t sid1; /* Dataspace ID */
+ hid_t tid1; /* Array Datatype ID */
+ hid_t tid2; /* VL Datatype ID */
+ hid_t tid3; /* Nested Array Datatype ID */
+ hsize_t sdims1[] = {SPACE1_DIM1};
+ hsize_t tdims1[] = {ARRAY1_DIM1};
+ int i,j,k,l; /* Index variables */
+ herr_t H5_ATTR_NDEBUG_UNUSED ret; /* Generic return value */
/* Initialize array data to write */
for(i=0; i<SPACE1_DIM1; i++)
@@ -3475,7 +3474,7 @@ static void gent_array8(void)
hid_t filetype = H5I_INVALID_HID; /* Handles */
hid_t space = H5I_INVALID_HID; /* Handles */
hid_t dset = H5I_INVALID_HID; /* Handles */
- herr_t status = -1;
+ herr_t H5_ATTR_NDEBUG_UNUSED status = -1;
hsize_t sdims[] = {F64_DIM0};
hsize_t tdims[] = {F64_DIM1};
int *wdata; /* Write buffer */
@@ -3542,7 +3541,7 @@ static void gent_empty(void)
} empty_struct;
hid_t file, dset, space, type;
hsize_t dims[] = { SPACE1_DIM1 };
- herr_t ret=0;
+ herr_t H5_ATTR_NDEBUG_UNUSED ret=0;
file = H5Fcreate(FILE32, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
@@ -3930,7 +3929,7 @@ static void write_attr_in(hid_t loc_id,
hid_t aid;
hid_t sid;
hid_t tid;
- herr_t status;
+ herr_t H5_ATTR_NDEBUG_UNUSED status;
int val, i, j, k, n;
float f;
@@ -4371,7 +4370,7 @@ static void write_dset_in(hid_t loc_id,
hid_t sid;
hid_t tid;
hid_t plist_id;
- herr_t status;
+ herr_t H5_ATTR_NDEBUG_UNUSED status;
int val, i, j, k, n;
float f;
int fillvalue=2;
@@ -4809,7 +4808,7 @@ static void gent_attr_all(void)
hid_t root_id;
hid_t sid;
hsize_t dims[1] = {2};
- herr_t status;
+ herr_t H5_ATTR_NDEBUG_UNUSED status;
/* Create a file and a dataset */
fid = H5Fcreate(FILE40, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
@@ -4967,7 +4966,7 @@ static void gent_compound_complex(void)
hid_t array4_tid; /* Array datatype handle */
hid_t datafile, dataset; /* Datafile/dataset handles */
hid_t dataspace; /* Dataspace handle */
- herr_t status; /* Error checking variable */
+ herr_t H5_ATTR_NDEBUG_UNUSED status; /* Error checking variable */
hsize_t dim[] = {F41_LENGTH}; /* Dataspace dimensions */
hsize_t array_dimb[] = {F41_DIMb}; /* Array dimensions */
hsize_t array_dimd[]={F41_ARRAY_DIMd1,F41_ARRAY_DIMd2}; /* Array dimensions */
@@ -5116,7 +5115,7 @@ static void gent_named_dtype_attr(void)
hid_t aid;
hid_t gid;
int data=8;
- herr_t ret;
+ herr_t H5_ATTR_NDEBUG_UNUSED ret;
/* Create a file */
fid=H5Fcreate(FILE42, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
@@ -5338,7 +5337,7 @@ make_external(hid_t fid)
hsize_t cur_size[1]; /*data space current size */
hsize_t max_size[1]; /*data space maximum size */
hsize_t size; /*bytes reserved for data in the external file*/
- int ret;
+ int H5_ATTR_NDEBUG_UNUSED ret;
cur_size[0] = max_size[0] = 100;
size = (max_size[0]*sizeof(int)/2);
@@ -5386,7 +5385,8 @@ static void gent_filters(void)
hsize_t dims1[RANK] = {DIM1,DIM2};
hsize_t chunk_dims[RANK] = {CDIM1,CDIM2};
int buf1[DIM1][DIM2];
- int i, j, n, ret;
+ int i, j, n;
+ int H5_ATTR_NDEBUG_UNUSED ret;
for(i=n=0; i<DIM1; i++){
for(j=0; j<DIM2; j++){
@@ -5732,8 +5732,7 @@ static void gent_fcontents(void)
hid_t tid; /* datatype ID */
hsize_t dims[1]={4};
int buf[4]={1,2,3,4};
- int ret;
-
+ int H5_ATTR_NDEBUG_UNUSED ret;
/* create a file */
fid = H5Fcreate(FILE46, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
@@ -5866,7 +5865,7 @@ static void gent_fvalues(void)
hvl_t fillval3; /* vlen fill value */
hsize_t dimarray[1]={3}; /* array dimension */
int buf4[2][3]= {{1,2,3},{4,5,6}}; /* array */
- int ret;
+ int H5_ATTR_NDEBUG_UNUSED ret;
/* create a file */
fid = H5Fcreate(FILE48, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
@@ -6024,9 +6023,9 @@ static void gent_string(void)
c_t buf3 = {24, "Four score and seven\n years ago our forefathers brought forth on this continent a new nation"};
char buf4[] = {"Four score and seven\n years ago our forefathers brought forth on this continent a new nation"};
hsize_t dims1[] = {1};
- hsize_t dims2[] = {SPACE1_DIM1};
- hsize_t dims4[1];
- int ret;
+ hsize_t dims2[] = {SPACE1_DIM1};
+ hsize_t dims4[1];
+ int H5_ATTR_NDEBUG_UNUSED ret;
dims4[0] = sizeof(buf4);
@@ -6121,7 +6120,8 @@ static void gent_aindices(void)
int buf2[10][10];
int buf3[2][10][10];
int buf4[2][2][10][10];
- int i, j, k, l, n, ret;
+ int i, j, k, l, n;
+ int H5_ATTR_NDEBUG_UNUSED ret;
for(i = n = 0; i < 100; i++)
buf1[i] = n++;
@@ -6188,11 +6188,11 @@ static void gent_aindices(void)
*/
static void gent_longlinks(void)
{
- hid_t fid = (-1); /* File ID */
- hid_t gid = (-1); /* Group ID */
- hid_t gid2 = (-1); /* Datatype ID */
- char *objname = NULL; /* Name of object [Long] */
- size_t u; /* Local index variable */
+ hid_t fid = (-1); /* File ID */
+ hid_t gid = (-1); /* Group ID */
+ hid_t H5_ATTR_NDEBUG_UNUSED gid2 = (-1); /* Datatype ID */
+ char *objname = NULL; /* Name of object [Long] */
+ size_t u; /* Local index variable */
/* Create files */
fid = H5Fcreate(FILE51, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
@@ -6369,7 +6369,7 @@ gent_bigdims(void)
hsize_t i;
char c;
size_t nelmts;
- int ret;
+ int H5_ATTR_NDEBUG_UNUSED ret;
/* create a file */
fid = H5Fcreate(FILE56, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
@@ -6465,7 +6465,8 @@ gent_hyperslab(void)
hid_t fid; /* file id */
hsize_t dims[2] = {32,4097}; /* big enough data size to force a second stripmine read */
double *buf;
- int i, ret;
+ int i;
+ int H5_ATTR_NDEBUG_UNUSED ret;
buf = (double*) HDmalloc(32 * 4097 * sizeof(double) );
for(i = 0; i < 32 * 4097; i++)
@@ -7091,7 +7092,8 @@ gent_dataset_idx(void)
hsize_t dims[2];
hsize_t maxdims[2];
int buf[20][10];
- int i, j, ret;
+ int i, j;
+ int H5_ATTR_NDEBUG_UNUSED ret;
/* Get a copy of the file aaccess property */
fapl = H5Pcreate(H5P_FILE_ACCESS);
@@ -7615,7 +7617,7 @@ static void
gent_charsets(void)
{
hid_t fid, did, sid;
- herr_t status;
+ herr_t H5_ATTR_NDEBUG_UNUSED status;
hsize_t dim[] = {1}; /* Dataspace dimensions */
typedef struct CharSetInfo {
const char *ascii_p_;
@@ -7689,7 +7691,7 @@ static void gent_compound_intsizes(void) {
Array1Struct *Array1;
hid_t Array1Structid; /* File datatype identifier */
- herr_t status; /* Error checking variable */
+ herr_t H5_ATTR_NDEBUG_UNUSED status; /* Error checking variable */
hsize_t dim[] = { F70_LENGTH }; /* Dataspace dimensions */
int m, n, o; /* Array init loop vars */
@@ -7962,7 +7964,7 @@ static void gent_compound_attr_intsizes(void) {
Array1Struct Array1[F70_LENGTH];
hid_t Array1Structid; /* File datatype identifier */
- herr_t status; /* Error checking variable */
+ herr_t H5_ATTR_NDEBUG_UNUSED status; /* Error checking variable */
hsize_t dim[] = { F70_LENGTH }; /* Dataspace dimensions */
int m, n, o; /* Array init loop vars */
@@ -8838,7 +8840,7 @@ static void gent_compound_int_array(void) {
Cmpd1Struct *Cmpd1;
hid_t Cmpd1Structid; /* File datatype identifier */
- herr_t status; /* Error checking variable */
+ herr_t H5_ATTR_NDEBUG_UNUSED status; /* Error checking variable */
hsize_t dim[] = { F76_LENGTH }; /* Dataspace dimensions */
int m, n; /* Array init loop vars */
@@ -9094,7 +9096,7 @@ static void gent_compound_ints(void) {
hid_t Cmpd1Structid; /* File datatype identifier */
hid_t Cmpd2Structid; /* File datatype identifier */
- herr_t status; /* Error checking variable */
+ herr_t H5_ATTR_NDEBUG_UNUSED status; /* Error checking variable */
hsize_t dim[] = { F77_LENGTH }; /* Dataspace dimensions */
int m; /* Array init loop vars */
@@ -10396,7 +10398,8 @@ static void gent_udfilter(void)
hsize_t dims1[RANK] = {DIM1,DIM2};
hsize_t chunk_dims[RANK] = {CDIM1,CDIM2};
int buf1[DIM1][DIM2];
- int i, j, n, ret;
+ int i, j, n;
+ int H5_ATTR_NDEBUG_UNUSED ret;
for(i=n=0; i<DIM1; i++){
for(j=0; j<DIM2; j++){
diff --git a/tools/test/h5repack/h5repackgentest.c b/tools/test/h5repack/h5repackgentest.c
index 77fb28a..7604964 100644
--- a/tools/test/h5repack/h5repackgentest.c
+++ b/tools/test/h5repack/h5repackgentest.c
@@ -147,7 +147,7 @@ __make_file(const char *basename, struct external_def *ext,
H5REPACKGENTEST_OOPS;
}
- space_id = H5Screate_simple(rank, dims, NULL);
+ space_id = H5Screate_simple((int)rank, dims, NULL);
if (space_id == H5I_INVALID_HID)
H5REPACKGENTEST_OOPS;
@@ -231,9 +231,9 @@ generate_int32le_3d(hbool_t external) {
/* generate values, alternating positive and negative
*/
- for (i = 0, n = 0; i < dims[0]; i++) {
- for (j = 0; j < dims[1]; j++) {
- for (k = 0; k < dims[2]; k++, n++) {
+ for (i = 0, n = 0; (hsize_t)i < dims[0]; i++) {
+ for (j = 0; (hsize_t)j < dims[1]; j++) {
+ for (k = 0; (hsize_t)k < dims[2]; k++, n++) {
wdata[n] = (k + j * 512 + i * 4096) * ((n & 1) ? (-1) : (1));
}
}
@@ -263,9 +263,9 @@ generate_uint8be(hbool_t external) {
/* Generate values, ping-pong from ends of range
*/
- for (i = 0, n = 0; i < dims[0]; i++) {
- for (j = 0; j < dims[1]; j++) {
- for (k = 0; k < dims[2]; k++, n++) {
+ for (i = 0, n = 0; (hsize_t)i < dims[0]; i++) {
+ for (j = 0; (hsize_t)j < dims[1]; j++) {
+ for (k = 0; (hsize_t)k < dims[2]; k++, n++) {
wdata[n] = (uint8_t)((n & 1) ? -n : n);
}
}
@@ -294,9 +294,9 @@ generate_f32le(hbool_t external) {
int ret_value = 0;
/* Generate values */
- for (i = 0, k = 0, n = 0; i < dims[0]; i++) {
- for (j = 0; j < dims[1]; j++, k++, n++) {
- wdata[k] = (float)(n * 801.1 * ((k % 5 == 1) ? (-1) : (1)));
+ for (i = 0, k = 0, n = 0; (hsize_t)i < dims[0]; i++) {
+ for (j = 0; (hsize_t)j < dims[1]; j++, k++, n++) {
+ wdata[k] = n * 801.1f * ((k % 5 == 1) ? (-1) : (1));
}
}
@@ -314,7 +314,6 @@ generate_f32le(hbool_t external) {
int
main(void) {
int i = 0;
- int ret_value = 0;
for (i = 0; i < 2; i++) {
hbool_t external = (i & 1) ? TRUE : FALSE;
diff --git a/tools/test/h5repack/h5repacktst.c b/tools/test/h5repack/h5repacktst.c
index f32e87c..2654685 100644
--- a/tools/test/h5repack/h5repacktst.c
+++ b/tools/test/h5repack/h5repacktst.c
@@ -3684,10 +3684,10 @@ make_userblock(void)
{
hid_t fid = H5I_INVALID_HID;
hid_t fcpl = H5I_INVALID_HID;
- int fd = -1; /* File descriptor for writing userblock */
- char ub[USERBLOCK_SIZE]; /* User block data */
- ssize_t nwritten; /* # of bytes written */
- size_t u; /* Local index variable */
+ int fd = -1; /* File descriptor for writing userblock */
+ char ub[USERBLOCK_SIZE]; /* User block data */
+ ssize_t H5_ATTR_NDEBUG_UNUSED nwritten; /* # of bytes written */
+ size_t u; /* Local index variable */
/* Create file creation property list with userblock set */
if((fcpl = H5Pcreate(H5P_FILE_CREATE)) < 0)
@@ -3749,7 +3749,7 @@ verify_userblock( const char* filename)
int fd = -1; /* File descriptor for writing userblock */
char ub[USERBLOCK_SIZE]; /* User block data */
hsize_t ub_size = 0; /* User block size */
- ssize_t nread; /* # of bytes read */
+ ssize_t H5_ATTR_NDEBUG_UNUSED nread; /* # of bytes read */
size_t u; /* Local index variable */
/* Open file with userblock */
@@ -3816,7 +3816,7 @@ make_userblock_file(void)
{
int fd = -1; /* File descriptor for writing userblock */
char ub[USERBLOCK_SIZE]; /* User block data */
- ssize_t nwritten; /* # of bytes written */
+ ssize_t H5_ATTR_NDEBUG_UNUSED nwritten; /* # of bytes written */
size_t u; /* Local index variable */
/* initialize userblock data */
diff --git a/tools/test/perform/chunk_cache.c b/tools/test/perform/chunk_cache.c
index 1d2e791..5557558 100644
--- a/tools/test/perform/chunk_cache.c
+++ b/tools/test/perform/chunk_cache.c
@@ -247,7 +247,8 @@ static int check_partial_chunks_perf(hid_t file)
dataset = H5Dopen2 (file, DSET1_NAME, dapl);
- memspace = H5Screate_simple(row_rank, row_dim, NULL);
+ H5_CHECK_OVERFLOW(row_rank, hsize_t, int);
+ memspace = H5Screate_simple((int)row_rank, row_dim, NULL);
filespace = H5Dget_space(dataset);
nbytes_global = 0;
@@ -256,7 +257,7 @@ static int check_partial_chunks_perf(hid_t file)
/* Read the data row by row */
for(i = 0; i < DSET1_DIM1; i++) {
- start[0] = i;
+ start[0] = (hsize_t)i;
if(H5Sselect_hyperslab(filespace, H5S_SELECT_SET,
start, NULL, count, NULL) < 0)
goto error;
@@ -318,7 +319,9 @@ static int check_hash_value_perf(hid_t file)
if((dataset = H5Dopen2 (file, DSET2_NAME, dapl)) < 0)
goto error;
- if((memspace = H5Screate_simple(column_rank, column_dim, NULL)) < 0)
+
+ H5_CHECK_OVERFLOW(column_rank, hsize_t, int);
+ if((memspace = H5Screate_simple((int)column_rank, column_dim, NULL)) < 0)
goto error;
if((filespace = H5Dget_space(dataset)) < 0)
goto error;
@@ -329,7 +332,7 @@ static int check_hash_value_perf(hid_t file)
/* Read the data column by column */
for(i = 0; i < DSET2_DIM2; i++) {
- start[1] = i;
+ start[1] = (hsize_t)i;
if(H5Sselect_hyperslab(filespace, H5S_SELECT_SET,
start, NULL, count, NULL) < 0)
goto error;
diff --git a/tools/test/perform/iopipe.c b/tools/test/perform/iopipe.c
index 57c0d52..bf4728d 100644
--- a/tools/test/perform/iopipe.c
+++ b/tools/test/perform/iopipe.c
@@ -133,7 +133,7 @@ synchronize (void)
#if defined(H5_HAVE_WIN32_API) && ! defined(__CYGWIN__)
_flushall();
#else
- int status;
+ int H5_ATTR_NDEBUG_UNUSED status;
status = HDsystem("sync");
HDassert(status >= 0);
@@ -169,7 +169,6 @@ main (void)
unsigned char *the_data = NULL;
hid_t file, dset, file_space = H5I_INVALID_HID;
- herr_t status;
#ifdef H5_HAVE_GETRUSAGE
struct rusage r_start, r_stop;
#else
@@ -178,8 +177,9 @@ main (void)
struct timeval t_start, t_stop;
int fd;
unsigned u;
- hssize_t n;
- off_t offset;
+ herr_t H5_ATTR_NDEBUG_UNUSED status;
+ hssize_t H5_ATTR_NDEBUG_UNUSED n;
+ off_t H5_ATTR_NDEBUG_UNUSED offset;
hsize_t start[2];
hsize_t count[2];
@@ -198,15 +198,15 @@ main (void)
/* Open the files */
file = H5Fcreate (HDF5_FILE_NAME, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
- assert (file>=0);
+ HDassert (file>=0);
fd = HDopen (RAW_FILE_NAME, O_RDWR|O_CREAT|O_TRUNC, 0666);
- assert (fd>=0);
+ HDassert (fd>=0);
/* Create the dataset */
file_space = H5Screate_simple (2, size, size);
- assert(file_space >= 0);
+ HDassert(file_space >= 0);
dset = H5Dcreate2(file, "dset", H5T_NATIVE_UCHAR, file_space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- assert(dset >= 0);
+ HDassert(dset >= 0);
the_data = (unsigned char *)malloc((size_t)(size[0] * size[1]));
/* initial fill for lazy malloc */
@@ -268,7 +268,7 @@ main (void)
HDfflush(stderr);
status = H5Dread (dset, H5T_NATIVE_UCHAR, file_space, file_space,
H5P_DEFAULT, the_data);
- assert (status>=0);
+ HDassert (status>=0);
}
#ifdef H5_HAVE_GETRUSAGE
HDgetrusage(RUSAGE_SELF, &r_stop);
@@ -306,9 +306,9 @@ main (void)
putc (PROGRESS, stderr);
HDfflush(stderr);
offset = HDlseek (fd, (off_t)0, SEEK_SET);
- assert (0==offset);
+ HDassert (0==offset);
n = HDwrite (fd, the_data, (size_t)(size[0]*size[1]));
- assert (n>=0 && (size_t)n==size[0]*size[1]);
+ HDassert (n>=0 && (size_t)n==size[0]*size[1]);
}
#ifdef H5_HAVE_GETRUSAGE
HDgetrusage(RUSAGE_SELF, &r_stop);
@@ -347,7 +347,7 @@ main (void)
HDfflush(stderr);
status = H5Dwrite (dset, H5T_NATIVE_UCHAR, H5S_ALL, H5S_ALL,
H5P_DEFAULT, the_data);
- assert (status>=0);
+ HDassert (status>=0);
}
#ifdef H5_HAVE_GETRUSAGE
HDgetrusage(RUSAGE_SELF, &r_stop);
@@ -385,9 +385,9 @@ main (void)
putc (PROGRESS, stderr);
HDfflush(stderr);
offset = HDlseek (fd, (off_t)0, SEEK_SET);
- assert (0==offset);
+ HDassert (0==offset);
n = HDread (fd, the_data, (size_t)(size[0]*size[1]));
- assert (n>=0 && (size_t)n==size[0]*size[1]);
+ HDassert (n>=0 && (size_t)n==size[0]*size[1]);
}
#ifdef H5_HAVE_GETRUSAGE
HDgetrusage(RUSAGE_SELF, &r_stop);
@@ -427,7 +427,7 @@ main (void)
HDfflush(stderr);
status = H5Dread (dset, H5T_NATIVE_UCHAR, file_space, file_space,
H5P_DEFAULT, the_data);
- assert (status>=0);
+ HDassert (status>=0);
}
#ifdef H5_HAVE_GETRUSAGE
HDgetrusage(RUSAGE_SELF, &r_stop);
@@ -449,11 +449,11 @@ main (void)
(size_t)(nread*size[0]*size[1]));
/* Read hyperslab */
- assert (size[0]>20 && size[1]>20);
+ HDassert (size[0]>20 && size[1]>20);
start[0] = start[1] = 10;
count[0] = count[1] = size[0]-20;
status = H5Sselect_hyperslab (file_space, H5S_SELECT_SET, start, NULL, count, NULL);
- assert (status>=0);
+ HDassert (status>=0);
synchronize ();
#ifdef H5_HAVE_GETRUSAGE
HDgetrusage(RUSAGE_SELF, &r_start);
@@ -471,7 +471,7 @@ main (void)
HDfflush(stderr);
status = H5Dread (dset, H5T_NATIVE_UCHAR, file_space, file_space,
H5P_DEFAULT, the_data);
- assert (status>=0);
+ HDassert (status>=0);
}
#ifdef H5_HAVE_GETRUSAGE
HDgetrusage(RUSAGE_SELF, &r_stop);
diff --git a/tools/test/perform/perf.c b/tools/test/perform/perf.c
index 34b8a2d..364836f 100644
--- a/tools/test/perform/perf.c
+++ b/tools/test/perform/perf.c
@@ -110,15 +110,15 @@ const char *FILENAME[] = {
/* function prototypes */
static int parse_args(int argc, char **argv);
-extern int errno;
-
+#ifndef H5_HAVE_UNISTD_H
/* globals needed for getopt */
extern char *optarg;
+#endif
int main(int argc, char **argv)
{
- char *buf, *tmp, *buf2, *tmp2, *check;
- int i, j, mynod=0, nprocs=1, err, my_correct = 1, correct, myerrno;
+ char *buf, *tmp, *buf2 = NULL, *tmp2 = NULL, *check;
+ int i, j, mynod=0, nprocs=1, my_correct = 1, correct, myerrno;
double stim, etim;
double write_tim = 0;
double read_tim = 0;
@@ -127,10 +127,6 @@ int main(int argc, char **argv)
double min_read_tim, min_write_tim;
double ave_read_tim, ave_write_tim;
int64_t iter_jump = 0;
- int64_t seek_position = 0;
- MPI_File fh;
- MPI_Status status;
- int nchars;
char filename[MAX_PATH];
herr_t ret; /* Generic return value */
@@ -164,7 +160,7 @@ int main(int argc, char **argv)
iter_jump = nprocs * opt_block;
/* setup a buffer of data to write */
- if (!(tmp = (char *) malloc(opt_block + 256))) {
+ if (!(tmp = (char *) malloc((size_t)opt_block + 256))) {
perror("malloc");
goto die_jar_jar_die;
}
@@ -172,7 +168,7 @@ int main(int argc, char **argv)
if (opt_correct) {
/* do the same buffer setup for verifiable data */
- if (!(tmp2 = (char *) malloc(opt_block + 256))) {
+ if (!(tmp2 = (char *) malloc((size_t)opt_block + 256))) {
perror("malloc2");
goto die_jar_jar_die;
}
@@ -222,7 +218,7 @@ int main(int argc, char **argv)
VRFY((fid >= 0), "H5Fcreate succeeded", H5FATAL);
/* define a contiquous dataset of opt_iter*nprocs*opt_block chars */
- dims[0] = opt_iter * nprocs * opt_block;
+ dims[0] = (hsize_t)opt_iter * (hsize_t)nprocs * (hsize_t)opt_block;
sid = H5Screate_simple(RANK, dims, NULL);
VRFY((sid >= 0), "H5Screate_simple succeeded", H5FATAL);
dataset = H5Dcreate2(fid, "Dataset1", H5T_NATIVE_CHAR, sid,
@@ -230,7 +226,7 @@ int main(int argc, char **argv)
VRFY((dataset >= 0), "H5Dcreate2 succeeded", H5FATAL);
/* create the memory dataspace and the file dataspace */
- dims[0] = opt_block;
+ dims[0] = (hsize_t)opt_block;
mem_dataspace = H5Screate_simple(RANK, dims, NULL);
VRFY((mem_dataspace >= 0), "", H5FATAL);
file_dataspace = H5Dget_space(dataset);
@@ -242,7 +238,7 @@ int main(int argc, char **argv)
for(j=0; j < opt_iter; j++) {
/* setup a file dataspace selection */
start[0] = (hsize_t)((j * iter_jump) + (mynod * opt_block));
- stride[0] = block[0] = opt_block;
+ stride[0] = block[0] = (hsize_t)opt_block;
count[0]= 1;
ret=H5Sselect_hyperslab(file_dataspace, H5S_SELECT_SET, start, stride, count, block);
VRFY((ret >= 0), "H5Sset_hyperslab succeeded", H5FATAL);
@@ -295,7 +291,7 @@ int main(int argc, char **argv)
for (j=0; j < opt_iter; j++) {
/* setup a file dataspace selection */
start[0] = (hsize_t)((j * iter_jump) + (mynod * opt_block));
- stride[0] = block[0] = opt_block;
+ stride[0] = block[0] = (hsize_t)opt_block;
count[0]= 1;
ret=H5Sselect_hyperslab(file_dataspace, H5S_SELECT_SET, start, stride, count, block);
VRFY((ret >= 0), "H5Sset_hyperslab succeeded", H5FATAL);
@@ -326,7 +322,7 @@ int main(int argc, char **argv)
/* if the user wanted to check correctness, compare the write
* buffer to the read buffer */
- if (opt_correct && memcmp(buf, buf2, opt_block)) {
+ if (opt_correct && memcmp(buf, buf2, (size_t)opt_block)) {
HDfprintf(stderr, "node %d, correctness test failed\n", mynod);
my_correct = 0;
MPI_Allreduce(&my_correct, &correct, 1, MPI_INT, MPI_MIN,
@@ -367,8 +363,8 @@ int main(int argc, char **argv)
/* print out the results on one node */
if (mynod == 0) {
- read_bw = ((int64_t)(opt_block*nprocs*opt_iter))/(max_read_tim*1000000.0);
- write_bw = ((int64_t)(opt_block*nprocs*opt_iter))/(max_write_tim*1000000.0);
+ read_bw = (double)((int64_t)(opt_block*nprocs*opt_iter))/(max_read_tim*1000000.0);
+ write_bw = (double)((int64_t)(opt_block*nprocs*opt_iter))/(max_write_tim*1000000.0);
printf("nr_procs = %d, nr_iter = %d, blk_sz = %ld\n", nprocs,
opt_iter, (long)opt_block);
@@ -439,9 +435,9 @@ parse_args(int argc, char **argv)
{
char *p;
- opt_alignment = HDatoi(optarg);
+ opt_alignment = (hsize_t)HDatoi(optarg);
if(NULL != (p = (char*)HDstrchr(optarg, '/')))
- opt_threshold = HDatoi(p + 1);
+ opt_threshold = (hsize_t)HDatoi(p + 1);
}
HDfprintf(stdout,
"alignment/threshold=%Hu/%Hu\n",
diff --git a/tools/test/perform/pio_engine.c b/tools/test/perform/pio_engine.c
index d000f60..3863550 100644
--- a/tools/test/perform/pio_engine.c
+++ b/tools/test/perform/pio_engine.c
@@ -54,24 +54,15 @@
/* sizes of various items. these sizes won't change during program execution */
/* The following three must have the same type */
-#define ELMT_SIZE (sizeof(unsigned char)) /* we're doing bytes */
-#define ELMT_MPI_TYPE MPI_BYTE
#define ELMT_H5_TYPE H5T_NATIVE_UCHAR
#define GOTOERROR(errcode) { ret_code = errcode; goto done; }
-#define GOTODONE { goto done; }
#define ERRMSG(mesg) { \
HDfprintf(stderr, "Proc %d: ", pio_mpi_rank_g); \
HDfprintf(stderr, "*** Assertion failed (%s) at line %4d in %s\n", \
mesg, (int)__LINE__, __FILE__); \
}
-#define MSG(mesg) { \
- HDfprintf(stderr, "Proc %d: ", pio_mpi_rank_g); \
- HDfprintf(stderr, "(%s) at line %4d in %s\n", \
- mesg, (int)__LINE__, __FILE__); \
-}
-
/* verify: if val is false (0), print mesg. */
#define VRFY(val, mesg) do { \
if (!val) { \
@@ -260,7 +251,7 @@ do_pio(parameters param)
}
if (!param.dim2d){
- if(((snbytes/pio_mpi_nprocs_g)%buf_size)!=0) {
+ if(((size_t)(snbytes/pio_mpi_nprocs_g)%buf_size)!=0) {
HDfprintf(stderr,
"Dataset size/process (%" H5_PRINTF_LL_WIDTH "d) must be a multiple of the "
"trasfer buffer size (%zu)\n",
@@ -269,7 +260,7 @@ do_pio(parameters param)
}
}
else {
- if((snbytes%buf_size)!=0) {
+ if(((size_t)snbytes%buf_size)!=0) {
HDfprintf(stderr,
"Dataset side size (%" H5_PRINTF_LL_WIDTH "d) must be a multiple of the "
"trasfer buffer size (%zu)\n",
@@ -371,15 +362,17 @@ done:
switch (iot) {
case POSIXIO:
if (fd.posixfd != -1)
- hrc = do_fclose(iot, &fd);
+ hrc = do_fclose(iot, &fd);
break;
case MPIO:
if (fd.mpifd != MPI_FILE_NULL)
- hrc = do_fclose(iot, &fd);
+ hrc = do_fclose(iot, &fd);
break;
case PHDF5:
if (fd.h5fd != -1)
- hrc = do_fclose(iot, &fd);
+ hrc = do_fclose(iot, &fd);
+ break;
+ default:
break;
}
@@ -422,6 +415,8 @@ pio_create_filename(iotype iot, const char *base_name, char *fullname, size_t si
case PHDF5:
suffix = ".h5";
break;
+ default:
+ break;
}
/* First use the environment variable and then try the constant */
@@ -589,7 +584,7 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
} /* end if */
/* Interleaved Pattern: */
else {
- bytes_begin[0] = (off_t)(blk_size*pio_mpi_rank_g);
+ bytes_begin[0] = (off_t)(blk_size*(size_t)pio_mpi_rank_g);
} /* end else */
/* Prepare buffer for verifying data */
@@ -613,9 +608,9 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
bytes_begin[0] = 0;
if(!parms->h5_use_chunks || parms->io_type==PHDF5)
- bytes_begin[1] = (off_t)(blk_size*pio_mpi_rank_g);
+ bytes_begin[1] = (off_t)(blk_size*(size_t)pio_mpi_rank_g);
else
- bytes_begin[1] = (off_t)(blk_size*blk_size*pio_mpi_rank_g);
+ bytes_begin[1] = (off_t)(blk_size*blk_size*(size_t)pio_mpi_rank_g);
} /* end else */
/* Prepare buffer for verifying data */
@@ -693,7 +688,7 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
VRFY((mrc==MPI_SUCCESS), "MPIO_TYPE_COMMIT");
/* Build contiguous file's derived type */
- mrc = MPI_Type_vector((int)blk_size, (int)1, (int)(snbytes/buf_size),
+ mrc = MPI_Type_vector((int)blk_size, (int)1, (int)((size_t)snbytes/buf_size),
mpi_partial_buffer_cont, &mpi_cont_type);
VRFY((mrc==MPI_SUCCESS), "MPIO_TYPE_CREATE");
@@ -711,7 +706,7 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
VRFY((mrc==MPI_SUCCESS), "MPIO_TYPE_COMMIT");
/* Build interleaved file's derived type */
- mrc = MPI_Type_vector((int)buf_size, (int)1, (int)(snbytes/blk_size),
+ mrc = MPI_Type_vector((int)buf_size, (int)1, (int)((size_t)snbytes/blk_size),
mpi_partial_buffer_inter, &mpi_inter_type);
VRFY((mrc==MPI_SUCCESS), "MPIO_TYPE_CREATE");
@@ -738,7 +733,7 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
VRFY((mrc==MPI_SUCCESS), "MPIO_TYPE_COMMIT");
/* Build chunk interleaved file's derived type */
- mrc = MPI_Type_vector((int)(buf_size/blk_size), (int)1, (int)(snbytes/blk_size),
+ mrc = MPI_Type_vector((int)(buf_size/blk_size), (int)1, (int)((size_t)snbytes/blk_size),
mpi_full_chunk, &mpi_chunk_inter_type);
VRFY((mrc==MPI_SUCCESS), "MPIO_TYPE_CREATE");
@@ -754,22 +749,22 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
if (!parms->dim2d){
if(nbytes>0) {
/* define a contiguous dataset of nbytes native bytes */
- h5dims[0] = nbytes;
+ h5dims[0] = (hsize_t)nbytes;
h5dset_space_id = H5Screate_simple(1, h5dims, NULL);
VRFY((h5dset_space_id >= 0), "H5Screate_simple");
/* Set up the file dset space id to select the pattern to access */
if (!parms->interleaved){
/* Contiguous pattern */
- h5start[0] = bytes_begin[0];
+ h5start[0] = (hsize_t)bytes_begin[0];
h5stride[0] = h5block[0] = blk_size;
h5count[0] = buf_size/blk_size;
} /* end if */
else {
/* Interleaved access pattern */
/* Skip offset over blocks of other processes */
- h5start[0] = bytes_begin[0];
- h5stride[0] = blk_size*pio_mpi_nprocs_g;
+ h5start[0] = (hsize_t)bytes_begin[0];
+ h5stride[0] = blk_size*(size_t)pio_mpi_nprocs_g;
h5block[0] = blk_size;
h5count[0] = buf_size/blk_size;
} /* end else */
@@ -797,16 +792,16 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
else {
if(nbytes>0) {
/* define a contiguous dataset of nbytes native bytes */
- h5dims[0] = snbytes;
- h5dims[1] = snbytes;
+ h5dims[0] = (hsize_t)snbytes;
+ h5dims[1] = (hsize_t)snbytes;
h5dset_space_id = H5Screate_simple(2, h5dims, NULL);
VRFY((h5dset_space_id >= 0), "H5Screate_simple");
/* Set up the file dset space id to select the pattern to access */
if (!parms->interleaved){
/* Contiguous pattern */
- h5start[0] = bytes_begin[0];
- h5start[1] = bytes_begin[1];
+ h5start[0] = (hsize_t)bytes_begin[0];
+ h5start[1] = (hsize_t)bytes_begin[1];
h5stride[0] = 1;
h5stride[1] = h5block[0] = h5block[1] = blk_size;
h5count[0] = 1;
@@ -815,10 +810,10 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
else {
/* Interleaved access pattern */
/* Skip offset over blocks of other processes */
- h5start[0] = bytes_begin[0];
- h5start[1] = bytes_begin[1];
+ h5start[0] = (hsize_t)bytes_begin[0];
+ h5start[1] = (hsize_t)bytes_begin[1];
h5stride[0] = blk_size;
- h5stride[1] = blk_size*pio_mpi_nprocs_g;
+ h5stride[1] = blk_size*(size_t)pio_mpi_nprocs_g;
h5block[0] = h5block[1] = blk_size;
h5count[0] = buf_size/blk_size;
h5count[1] = 1;
@@ -866,6 +861,9 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
} /* end if */
} /* end if */
break;
+
+ default:
+ break;
} /* end switch */
for (ndset = 1; ndset <= ndsets; ++ndset) {
@@ -929,6 +927,9 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
GOTOERROR(FAIL);
}
break;
+
+ default:
+ break;
}
/* The task is to transfer bytes_count bytes, starting at
@@ -982,7 +983,7 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
VRFY((rc != 0), "POSIXWRITE");
/* Advance global offset in dataset */
- nbytes_xfer+=buf_size;
+ nbytes_xfer+=(ssize_t)buf_size;
} /* end if */
/* Interleaved access pattern */
else {
@@ -1011,7 +1012,7 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
buf_p+=blk_size;
/* Advance global offset in dataset */
- nbytes_xfer+=blk_size;
+ nbytes_xfer+=(ssize_t)blk_size;
/* Decrement number of bytes left this time */
nbytes_toxfer-=blk_size;
@@ -1025,8 +1026,8 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
/* Contiguous access pattern */
if (!parms->interleaved) {
/* Compute file offset */
- file_offset=posix_file_offset+(off_t)(((nbytes_xfer/blk_size)
- /snbytes)*(blk_size*snbytes)+((nbytes_xfer/blk_size)%snbytes));
+ file_offset=posix_file_offset+(off_t)((((size_t)nbytes_xfer/blk_size)
+ /(size_t)snbytes)*(blk_size*(size_t)snbytes)+(((size_t)nbytes_xfer/blk_size)%(size_t)snbytes));
/* Number of bytes to be transferred per I/O operation */
nbytes_xfer_advance = buf_size;
@@ -1037,9 +1038,9 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
/* Interleaved access pattern */
else {
/* Compute file offset */
- file_offset=posix_file_offset+(off_t)((((nbytes_xfer/buf_size)
- *pio_mpi_nprocs_g)/snbytes)*(buf_size*snbytes)
- +((nbytes_xfer/buf_size)*pio_mpi_nprocs_g)%snbytes);
+ file_offset=posix_file_offset+(off_t)(((((size_t)nbytes_xfer/buf_size)
+ *(size_t)pio_mpi_nprocs_g)/(size_t)snbytes)*(buf_size*(size_t)snbytes)
+ +(((size_t)nbytes_xfer/buf_size)*(size_t)pio_mpi_nprocs_g)%(size_t)snbytes);
/* Number of bytes to be transferred per I/O operation */
nbytes_xfer_advance = blk_size;
@@ -1070,16 +1071,16 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
*snbytes/blk_size*(blk_size*blk_size))+((nbytes_xfer/(buf_size/blk_size))
*pio_mpi_nprocs_g)%(snbytes/blk_size*(blk_size*blk_size))); */
- file_offset=posix_file_offset+(off_t)(((nbytes_xfer/(buf_size/blk_size)
- *pio_mpi_nprocs_g)/(snbytes*blk_size))*(buf_size*snbytes)+((nbytes_xfer/(buf_size/blk_size))
- *pio_mpi_nprocs_g)%(snbytes*blk_size));
+ file_offset=posix_file_offset+(off_t)((((size_t)nbytes_xfer/(buf_size/blk_size)
+ *(size_t)pio_mpi_nprocs_g)/((size_t)snbytes*blk_size))*(buf_size*(size_t)snbytes)+(((size_t)nbytes_xfer/(buf_size/blk_size))
+ *(size_t)pio_mpi_nprocs_g)%((size_t)snbytes*blk_size));
/* Number of bytes to be transferred per I/O operation */
nbytes_xfer_advance = blk_size * blk_size;
/* Global offset advance after each I/O operation */
/* file_offset_advance = (off_t)(snbytes/blk_size*(blk_size*blk_size)); */
- file_offset_advance = (off_t)(snbytes*blk_size);
+ file_offset_advance = (off_t)snbytes*(off_t)blk_size;
} /* end else */
} /* end else */
@@ -1106,7 +1107,7 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
buf_p+=nbytes_xfer_advance;
/* Advance global offset in dataset */
- nbytes_xfer+=nbytes_xfer_advance;
+ nbytes_xfer+=(ssize_t)nbytes_xfer_advance;
/* Decrement number of bytes left this time */
nbytes_toxfer-=nbytes_xfer_advance;
@@ -1137,7 +1138,7 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
VRFY((mrc==MPI_SUCCESS), "MPIO_WRITE");
/* Advance global offset in dataset */
- nbytes_xfer+=buf_size;
+ nbytes_xfer+=(ssize_t)buf_size;
} /* end if */
/* Interleaved access pattern */
else {
@@ -1162,7 +1163,7 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
buf_p+=blk_size;
/* Advance global offset in dataset */
- nbytes_xfer+=blk_size;
+ nbytes_xfer+=(ssize_t)blk_size;
/* Decrement number of bytes left this time */
nbytes_toxfer-=blk_size;
@@ -1183,7 +1184,7 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
VRFY((mrc==MPI_SUCCESS), "MPIO_WRITE");
/* Advance global offset in dataset */
- nbytes_xfer+=buf_size;
+ nbytes_xfer+=(ssize_t)buf_size;
} /* end if */
/* Interleaved access pattern */
else {
@@ -1202,7 +1203,7 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
VRFY((mrc==MPI_SUCCESS), "MPIO_WRITE");
/* Advance global offset in dataset */
- nbytes_xfer+=buf_size;
+ nbytes_xfer+=(ssize_t)buf_size;
} /* end else */
} /* end else */
} /* end if */
@@ -1213,8 +1214,8 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
/* Contiguous access pattern */
if (!parms->interleaved) {
/* Compute offset in file */
- mpi_offset=mpi_file_offset+((nbytes_xfer/blk_size)/snbytes)*
- (blk_size*snbytes)+((nbytes_xfer/blk_size)%snbytes);
+ mpi_offset=mpi_file_offset+(MPI_Offset)((((size_t)nbytes_xfer/blk_size)/(size_t)snbytes)*
+ (blk_size*(size_t)snbytes))+(MPI_Offset)(((size_t)nbytes_xfer/blk_size)%(size_t)snbytes);
/* Number of bytes to be transferred per I/O operation */
nbytes_xfer_advance = buf_size;
@@ -1228,8 +1229,8 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
/* Interleaved access pattern */
else {
/* Compute offset in file */
- mpi_offset=mpi_file_offset+(((nbytes_xfer/buf_size)*pio_mpi_nprocs_g)/snbytes)*
- (buf_size*snbytes)+((nbytes_xfer/buf_size)*pio_mpi_nprocs_g)%snbytes;
+ mpi_offset=mpi_file_offset+(MPI_Offset)(((((size_t)nbytes_xfer/buf_size)*(size_t)pio_mpi_nprocs_g)/(size_t)snbytes)*
+ (buf_size*(size_t)snbytes))+(MPI_Offset)((((size_t)nbytes_xfer/buf_size)*(size_t)pio_mpi_nprocs_g)%(size_t)snbytes);
/* Number of bytes to be transferred per I/O operation */
nbytes_xfer_advance = blk_size;
@@ -1266,16 +1267,16 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
(buf_size/blk_size*snbytes/blk_size*(blk_size*blk_size))+
((nbytes_xfer/(buf_size/blk_size))*pio_mpi_nprocs_g)%(snbytes
/blk_size*(blk_size*blk_size)); */
- mpi_offset=mpi_file_offset+((nbytes_xfer/(buf_size/blk_size)
- *pio_mpi_nprocs_g)/(snbytes*blk_size))*(buf_size*snbytes)
- +((nbytes_xfer/(buf_size/blk_size))*pio_mpi_nprocs_g)%(snbytes*blk_size);
+ mpi_offset=mpi_file_offset+(MPI_Offset)((((size_t)nbytes_xfer/(buf_size/blk_size)
+ *(size_t)pio_mpi_nprocs_g)/((size_t)snbytes*blk_size))*(buf_size*(size_t)snbytes))
+ +(MPI_Offset)((((size_t)nbytes_xfer/(buf_size/blk_size))*(size_t)pio_mpi_nprocs_g)%((size_t)snbytes*blk_size));
/* Number of bytes to be transferred per I/O operation */
nbytes_xfer_advance = blk_size * blk_size;
/* Global offset advance after each I/O operation */
/* mpi_offset_advance = (MPI_Offset)(snbytes/blk_size*(blk_size*blk_size)); */
- mpi_offset_advance = (MPI_Offset)(snbytes*blk_size);
+ mpi_offset_advance = (MPI_Offset)((size_t)snbytes*blk_size);
/* MPI type to be used for collective access */
mpi_collective_type = mpi_chunk_inter_type;
@@ -1301,7 +1302,7 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
buf_p+=nbytes_xfer_advance;
/* Advance global offset in dataset */
- nbytes_xfer+=nbytes_xfer_advance;
+ nbytes_xfer+=(ssize_t)nbytes_xfer_advance;
/* Decrement number of bytes left this time */
nbytes_toxfer-=nbytes_xfer_advance;
@@ -1324,7 +1325,7 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
VRFY((mrc==MPI_SUCCESS), "MPIO_WRITE");
/* Advance global offset in dataset */
- nbytes_xfer+=buf_size*blk_size;
+ nbytes_xfer+=(off_t)buf_size*(off_t)blk_size;
} /* end else */
} /* end else */
@@ -1353,22 +1354,22 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
VRFY((hrc >= 0), "H5Dwrite");
/* Increment number of bytes transferred */
- nbytes_xfer += buf_size;
+ nbytes_xfer += (ssize_t)buf_size;
} /* end if */
/* 2D dataspace */
else {
/* Set up the file dset space id to move the selection to process */
if (!parms->interleaved){
/* Contiguous pattern */
- h5offset[0] = (nbytes_xfer/(snbytes*blk_size))*blk_size;
- h5offset[1] = (nbytes_xfer%(snbytes*blk_size))/blk_size;
+ h5offset[0] = (hssize_t)(((size_t)nbytes_xfer/((size_t)snbytes*blk_size))*blk_size);
+ h5offset[1] = (hssize_t)(((size_t)nbytes_xfer%((size_t)snbytes*blk_size))/blk_size);
} /* end if */
else {
/* Interleaved access pattern */
/* Skip offset over blocks of other processes */
- h5offset[0] = ((nbytes_xfer*pio_mpi_nprocs_g)/(snbytes*buf_size))*buf_size;
- h5offset[1] = ((nbytes_xfer*pio_mpi_nprocs_g)%(snbytes*buf_size))/buf_size;
+ h5offset[0] = (hssize_t)((((size_t)nbytes_xfer*(size_t)pio_mpi_nprocs_g)/((size_t)snbytes*buf_size))*buf_size);
+ h5offset[1] = (hssize_t)((((size_t)nbytes_xfer*(size_t)pio_mpi_nprocs_g)%((size_t)snbytes*buf_size))/buf_size);
} /* end else */
hrc = H5Soffset_simple(h5dset_space_id, h5offset);
@@ -1380,11 +1381,14 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets,
VRFY((hrc >= 0), "H5Dwrite");
/* Increment number of bytes transferred */
- nbytes_xfer += buf_size*blk_size;
+ nbytes_xfer += (off_t)buf_size*(off_t)blk_size;
} /* end else */
break;
+
+ default:
+ break;
} /* switch (parms->io_type) */
} /* end while */
@@ -1569,7 +1573,7 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
} /* end if */
/* Interleaved Pattern: */
else {
- bytes_begin[0] = (off_t)(blk_size*pio_mpi_rank_g);
+ bytes_begin[0] = (off_t)blk_size*(off_t)pio_mpi_rank_g;
} /* end else */
}/* end if */
/* 2D dataspace */
@@ -1591,9 +1595,9 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
bytes_begin[0] = 0;
if (!parms->h5_use_chunks || parms->io_type==PHDF5)
- bytes_begin[1] = (off_t)(blk_size*pio_mpi_rank_g);
+ bytes_begin[1] = (off_t)blk_size*(off_t)pio_mpi_rank_g;
else
- bytes_begin[1] = (off_t)(blk_size*blk_size*pio_mpi_rank_g);
+ bytes_begin[1] = (off_t)blk_size*(off_t)blk_size*(off_t)pio_mpi_rank_g;
} /* end else */
} /* end else */
@@ -1665,7 +1669,7 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
VRFY((mrc==MPI_SUCCESS), "MPIO_TYPE_COMMIT");
/* Build contiguous file's derived type */
- mrc = MPI_Type_vector((int)blk_size, (int)1, (int)(snbytes/buf_size),
+ mrc = MPI_Type_vector((int)blk_size, (int)1, (int)((size_t)snbytes/buf_size),
mpi_partial_buffer_cont, &mpi_cont_type);
VRFY((mrc==MPI_SUCCESS), "MPIO_TYPE_CREATE");
@@ -1683,7 +1687,7 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
VRFY((mrc==MPI_SUCCESS), "MPIO_TYPE_COMMIT");
/* Build interleaved file's derived type */
- mrc = MPI_Type_vector((int)buf_size, (int)1, (int)(snbytes/blk_size),
+ mrc = MPI_Type_vector((int)buf_size, (int)1, (int)((size_t)snbytes/blk_size),
mpi_partial_buffer_inter, &mpi_inter_type);
VRFY((mrc==MPI_SUCCESS), "MPIO_TYPE_CREATE");
@@ -1710,7 +1714,7 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
VRFY((mrc==MPI_SUCCESS), "MPIO_TYPE_COMMIT");
/* Build chunk interleaved file's derived type */
- mrc = MPI_Type_vector((int)(buf_size/blk_size), (int)1, (int)(snbytes/blk_size),
+ mrc = MPI_Type_vector((int)(buf_size/blk_size), (int)1, (int)((size_t)snbytes/blk_size),
mpi_full_chunk, &mpi_chunk_inter_type);
VRFY((mrc==MPI_SUCCESS), "MPIO_TYPE_CREATE");
@@ -1725,22 +1729,22 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
if (!parms->dim2d){
if(nbytes>0) {
/* define a contiguous dataset of nbytes native bytes */
- h5dims[0] = nbytes;
+ h5dims[0] = (hsize_t)nbytes;
h5dset_space_id = H5Screate_simple(1, h5dims, NULL);
VRFY((h5dset_space_id >= 0), "H5Screate_simple");
/* Set up the file dset space id to select the pattern to access */
if (!parms->interleaved){
/* Contiguous pattern */
- h5start[0] = bytes_begin[0];
+ h5start[0] = (hsize_t)bytes_begin[0];
h5stride[0] = h5block[0] = blk_size;
h5count[0] = buf_size/blk_size;
} /* end if */
else {
/* Interleaved access pattern */
/* Skip offset over blocks of other processes */
- h5start[0] = bytes_begin[0];
- h5stride[0] = blk_size*pio_mpi_nprocs_g;
+ h5start[0] = (hsize_t)bytes_begin[0];
+ h5stride[0] = blk_size*(size_t)pio_mpi_nprocs_g;
h5block[0] = blk_size;
h5count[0] = buf_size/blk_size;
} /* end else */
@@ -1768,16 +1772,16 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
else {
if(nbytes>0) {
/* define a contiguous dataset of nbytes native bytes */
- h5dims[0] = snbytes;
- h5dims[1] = snbytes;
+ h5dims[0] = (hsize_t)snbytes;
+ h5dims[1] = (hsize_t)snbytes;
h5dset_space_id = H5Screate_simple(2, h5dims, NULL);
VRFY((h5dset_space_id >= 0), "H5Screate_simple");
/* Set up the file dset space id to select the pattern to access */
if (!parms->interleaved){
/* Contiguous pattern */
- h5start[0] = bytes_begin[0];
- h5start[1] = bytes_begin[1];
+ h5start[0] = (hsize_t)bytes_begin[0];
+ h5start[1] = (hsize_t)bytes_begin[1];
h5stride[0] = 1;
h5stride[1] = h5block[0] = h5block[1] = blk_size;
h5count[0] = 1;
@@ -1786,10 +1790,10 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
else {
/* Interleaved access pattern */
/* Skip offset over blocks of other processes */
- h5start[0] = bytes_begin[0];
- h5start[1] = bytes_begin[1];
+ h5start[0] = (hsize_t)bytes_begin[0];
+ h5start[1] = (hsize_t)bytes_begin[1];
h5stride[0] = blk_size;
- h5stride[1] = blk_size*pio_mpi_nprocs_g;
+ h5stride[1] = blk_size*(size_t)pio_mpi_nprocs_g;
h5block[0] = h5block[1] = blk_size;
h5count[0] = buf_size/blk_size;
h5count[1] = 1;
@@ -1824,19 +1828,22 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
/* Create the dataset transfer property list */
h5dxpl = H5Pcreate(H5P_DATASET_XFER);
if (h5dxpl < 0) {
- HDfprintf(stderr, "HDF5 Property List Create failed\n");
- GOTOERROR(FAIL);
+ HDfprintf(stderr, "HDF5 Property List Create failed\n");
+ GOTOERROR(FAIL);
}
/* Change to collective I/O, if asked */
if(parms->collective) {
- hrc = H5Pset_dxpl_mpio(h5dxpl, H5FD_MPIO_COLLECTIVE);
- if (hrc < 0) {
- HDfprintf(stderr, "HDF5 Property List Set failed\n");
- GOTOERROR(FAIL);
- } /* end if */
+ hrc = H5Pset_dxpl_mpio(h5dxpl, H5FD_MPIO_COLLECTIVE);
+ if (hrc < 0) {
+ HDfprintf(stderr, "HDF5 Property List Set failed\n");
+ GOTOERROR(FAIL);
+ } /* end if */
} /* end if */
break;
+
+ default:
+ break;
} /* end switch */
for (ndset = 1; ndset <= ndsets; ++ndset) {
@@ -1847,19 +1854,21 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
switch (parms->io_type) {
case POSIXIO:
case MPIO:
- /* both posix and mpi io just need dataset offset in file*/
- dset_offset = (ndset - 1) * nbytes;
- break;
+ /* both posix and mpi io just need dataset offset in file*/
+ dset_offset = (ndset - 1) * nbytes;
+ break;
case PHDF5:
HDsprintf(dname, "Dataset_%ld", ndset);
- h5ds_id = H5DOPEN(fd->h5fd, dname);
- if (h5ds_id < 0) {
- HDfprintf(stderr, "HDF5 Dataset open failed\n");
- GOTOERROR(FAIL);
- }
+ h5ds_id = H5DOPEN(fd->h5fd, dname);
+ if (h5ds_id < 0) {
+ HDfprintf(stderr, "HDF5 Dataset open failed\n");
+ GOTOERROR(FAIL);
+ }
+ break;
- break;
+ default:
+ break;
}
/* The task is to transfer bytes_count bytes, starting at
@@ -1913,7 +1922,7 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
VRFY((rc != 0), "POSIXREAD");
/* Advance global offset in dataset */
- nbytes_xfer+=buf_size;
+ nbytes_xfer+=(off_t)buf_size;
} /* end if */
/* Interleaved access pattern */
else {
@@ -1942,7 +1951,7 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
buf_p+=blk_size;
/* Advance global offset in dataset */
- nbytes_xfer+=blk_size;
+ nbytes_xfer+=(off_t)blk_size;
/* Decrement number of bytes left this time */
nbytes_toxfer-=blk_size;
@@ -1956,8 +1965,8 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
/* Contiguous access pattern */
if (!parms->interleaved) {
/* Compute file offset */
- file_offset=posix_file_offset+(off_t)(((nbytes_xfer/blk_size)
- /snbytes)*(blk_size*snbytes)+((nbytes_xfer/blk_size)%snbytes));
+ file_offset=posix_file_offset+(off_t)((((size_t)nbytes_xfer/blk_size)
+ /(size_t)snbytes)*(blk_size*(size_t)snbytes)+(((size_t)nbytes_xfer/blk_size)%(size_t)snbytes));
/* Number of bytes to be transferred per I/O operation */
nbytes_xfer_advance = buf_size;
@@ -1968,9 +1977,9 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
/* Interleaved access pattern */
else {
/* Compute file offset */
- file_offset=posix_file_offset+(off_t)((((nbytes_xfer/buf_size)
- *pio_mpi_nprocs_g)/snbytes)*(buf_size*snbytes)
- +((nbytes_xfer/buf_size)*pio_mpi_nprocs_g)%snbytes);
+ file_offset=posix_file_offset+(off_t)(((((size_t)nbytes_xfer/buf_size)
+ *(size_t)pio_mpi_nprocs_g)/(size_t)snbytes)*(buf_size*(size_t)snbytes)
+ +(((size_t)nbytes_xfer/buf_size)*(size_t)pio_mpi_nprocs_g)%(size_t)snbytes);
/* Number of bytes to be transferred per I/O operation */
nbytes_xfer_advance = blk_size;
@@ -2001,16 +2010,16 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
*snbytes/blk_size*(blk_size*blk_size))+((nbytes_xfer/(buf_size/blk_size))
*pio_mpi_nprocs_g)%(snbytes/blk_size*(blk_size*blk_size))); */
- file_offset=posix_file_offset+(off_t)(((nbytes_xfer/(buf_size/blk_size)
- *pio_mpi_nprocs_g)/(snbytes*blk_size))*(buf_size*snbytes)+((nbytes_xfer/(buf_size/blk_size))
- *pio_mpi_nprocs_g)%(snbytes*blk_size));
+ file_offset=posix_file_offset+(off_t)((((size_t)nbytes_xfer/(buf_size/blk_size)
+ *(size_t)pio_mpi_nprocs_g)/((size_t)snbytes*blk_size))*(buf_size*(size_t)snbytes)+(((size_t)nbytes_xfer/(buf_size/blk_size))
+ *(size_t)pio_mpi_nprocs_g)%((size_t)snbytes*blk_size));
/* Number of bytes to be transferred per I/O operation */
nbytes_xfer_advance = blk_size * blk_size;
/* Global offset advance after each I/O operation */
/* file_offset_advance = (off_t)(snbytes/blk_size*(blk_size*blk_size)); */
- file_offset_advance = (off_t)(snbytes*blk_size);
+ file_offset_advance = (off_t)((size_t)snbytes*blk_size);
} /* end else */
} /* end else */
@@ -2037,7 +2046,7 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
buf_p+=nbytes_xfer_advance;
/* Advance global offset in dataset */
- nbytes_xfer+=nbytes_xfer_advance;
+ nbytes_xfer+=(off_t)nbytes_xfer_advance;
/* Decrement number of bytes left this time */
nbytes_toxfer-=nbytes_xfer_advance;
@@ -2067,7 +2076,7 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
VRFY((mrc==MPI_SUCCESS), "MPIO_READ");
/* Advance global offset in dataset */
- nbytes_xfer+=buf_size;
+ nbytes_xfer+=(off_t)buf_size;
} /* end if */
/* Interleaved access pattern */
else {
@@ -2092,7 +2101,7 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
buf_p+=blk_size;
/* Advance global offset in dataset */
- nbytes_xfer+=blk_size;
+ nbytes_xfer+=(off_t)blk_size;
/* Decrement number of bytes left this time */
nbytes_toxfer-=blk_size;
@@ -2113,7 +2122,7 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
VRFY((mrc==MPI_SUCCESS), "MPIO_READ");
/* Advance global offset in dataset */
- nbytes_xfer+=buf_size;
+ nbytes_xfer+=(off_t)buf_size;
} /* end if */
/* Interleaved access pattern */
else {
@@ -2132,7 +2141,7 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
VRFY((mrc==MPI_SUCCESS), "MPIO_READ");
/* Advance global offset in dataset */
- nbytes_xfer+=buf_size;
+ nbytes_xfer+=(off_t)buf_size;
} /* end else */
} /* end else */
} /* end if */
@@ -2143,8 +2152,8 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
/* Contiguous access pattern */
if (!parms->interleaved) {
/* Compute offset in file */
- mpi_offset=mpi_file_offset+((nbytes_xfer/blk_size)/snbytes)*
- (blk_size*snbytes)+((nbytes_xfer/blk_size)%snbytes);
+ mpi_offset=mpi_file_offset+(MPI_Offset)((((size_t)nbytes_xfer/blk_size)/(size_t)snbytes)*
+ (blk_size*(size_t)snbytes))+(MPI_Offset)(((size_t)nbytes_xfer/blk_size)%(size_t)snbytes);
/* Number of bytes to be transferred per I/O operation */
nbytes_xfer_advance = buf_size;
@@ -2158,8 +2167,8 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
/* Interleaved access pattern */
else {
/* Compute offset in file */
- mpi_offset=mpi_file_offset+(((nbytes_xfer/buf_size)*pio_mpi_nprocs_g)/snbytes)*
- (buf_size*snbytes)+((nbytes_xfer/buf_size)*pio_mpi_nprocs_g)%snbytes;
+ mpi_offset=mpi_file_offset+(MPI_Offset)(((((size_t)nbytes_xfer/buf_size)*(size_t)pio_mpi_nprocs_g)/(size_t)snbytes)*
+ (buf_size*(size_t)snbytes))+(MPI_Offset)((((size_t)nbytes_xfer/buf_size)*(size_t)pio_mpi_nprocs_g)%(size_t)snbytes);
/* Number of bytes to be transferred per I/O operation */
nbytes_xfer_advance = blk_size;
@@ -2196,16 +2205,16 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
(buf_size/blk_size*snbytes/blk_size*(blk_size*blk_size))+
((nbytes_xfer/(buf_size/blk_size))*pio_mpi_nprocs_g)%(snbytes
/blk_size*(blk_size*blk_size)); */
- mpi_offset=mpi_file_offset+((nbytes_xfer/(buf_size/blk_size)
- *pio_mpi_nprocs_g)/(snbytes*blk_size))*(buf_size*snbytes)
- +((nbytes_xfer/(buf_size/blk_size))*pio_mpi_nprocs_g)%(snbytes*blk_size);
+ mpi_offset=mpi_file_offset+(MPI_Offset)((((size_t)nbytes_xfer/(buf_size/blk_size)
+ *(size_t)pio_mpi_nprocs_g)/((size_t)snbytes*blk_size))*(buf_size*(size_t)snbytes))
+ +(MPI_Offset)((((size_t)nbytes_xfer/(buf_size/blk_size))*(size_t)pio_mpi_nprocs_g)%((size_t)snbytes*blk_size));
/* Number of bytes to be transferred per I/O operation */
nbytes_xfer_advance = blk_size * blk_size;
/* Global offset advance after each I/O operation */
/* mpi_offset_advance = (MPI_Offset)(snbytes/blk_size*(blk_size*blk_size)); */
- mpi_offset_advance = (MPI_Offset)(snbytes*blk_size);
+ mpi_offset_advance = (MPI_Offset)((size_t)snbytes*blk_size);
/* MPI type to be used for collective access */
mpi_collective_type = mpi_chunk_inter_type;
@@ -2231,7 +2240,7 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
buf_p+=nbytes_xfer_advance;
/* Advance global offset in dataset */
- nbytes_xfer+=nbytes_xfer_advance;
+ nbytes_xfer+=(off_t)nbytes_xfer_advance;
/* Decrement number of bytes left this time */
nbytes_toxfer-=nbytes_xfer_advance;
@@ -2254,7 +2263,7 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
VRFY((mrc==MPI_SUCCESS), "MPIO_READ");
/* Advance global offset in dataset */
- nbytes_xfer+=buf_size*blk_size;
+ nbytes_xfer+=(off_t)buf_size*(off_t)blk_size;
} /* end else */
} /* end else */
@@ -2282,21 +2291,21 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
VRFY((hrc >= 0), "H5Dread");
/* Increment number of bytes transferred */
- nbytes_xfer += buf_size;
+ nbytes_xfer += (off_t)buf_size;
} /* end if */
/* 2D dataspace */
else {
/* Set up the file dset space id to move the selection to process */
if (!parms->interleaved){
/* Contiguous pattern */
- h5offset[0] = (nbytes_xfer/(snbytes*blk_size))*blk_size;
- h5offset[1] = (nbytes_xfer%(snbytes*blk_size))/blk_size;
+ h5offset[0] = (hssize_t)(((size_t)nbytes_xfer/((size_t)snbytes*blk_size))*blk_size);
+ h5offset[1] = (hssize_t)(((size_t)nbytes_xfer%((size_t)snbytes*blk_size))/blk_size);
} /* end if */
else {
/* Interleaved access pattern */
/* Skip offset over blocks of other processes */
- h5offset[0] = ((nbytes_xfer*pio_mpi_nprocs_g)/(snbytes*buf_size))*buf_size;
- h5offset[1] = ((nbytes_xfer*pio_mpi_nprocs_g)%(snbytes*buf_size))/buf_size;
+ h5offset[0] = (hssize_t)((((size_t)nbytes_xfer*(size_t)pio_mpi_nprocs_g)/((size_t)snbytes*buf_size))*buf_size);
+ h5offset[1] = (hssize_t)((((size_t)nbytes_xfer*(size_t)pio_mpi_nprocs_g)%((size_t)snbytes*buf_size))/buf_size);
} /* end else */
hrc = H5Soffset_simple(h5dset_space_id, h5offset);
@@ -2308,10 +2317,13 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets,
VRFY((hrc >= 0), "H5Dread");
/* Increment number of bytes transferred */
- nbytes_xfer += buf_size*blk_size;
+ nbytes_xfer += (off_t)buf_size*(off_t)blk_size;
} /* end else */
break;
+
+ default:
+ break;
} /* switch (parms->io_type) */
/* Verify raw data, if asked */
@@ -2541,6 +2553,9 @@ do_fopen(parameters *param, char *fname, file_descr *fd /*out*/, int flags)
}
break;
+
+ default:
+ break;
}
done:
@@ -2561,38 +2576,41 @@ do_fclose(iotype iot, file_descr *fd /*out*/)
int mrc = 0, rc = 0;
switch (iot) {
- case POSIXIO:
- rc = POSIXCLOSE(fd->posixfd);
+ case POSIXIO:
+ rc = POSIXCLOSE(fd->posixfd);
- if (rc != 0){
- HDfprintf(stderr, "POSIX File Close failed\n");
- GOTOERROR(FAIL);
- }
+ if (rc != 0){
+ HDfprintf(stderr, "POSIX File Close failed\n");
+ GOTOERROR(FAIL);
+ }
- fd->posixfd = -1;
- break;
+ fd->posixfd = -1;
+ break;
- case MPIO:
- mrc = MPI_File_close(&fd->mpifd);
+ case MPIO:
+ mrc = MPI_File_close(&fd->mpifd);
- if (mrc != MPI_SUCCESS){
- HDfprintf(stderr, "MPI File close failed\n");
- GOTOERROR(FAIL);
- }
+ if (mrc != MPI_SUCCESS){
+ HDfprintf(stderr, "MPI File close failed\n");
+ GOTOERROR(FAIL);
+ }
- fd->mpifd = MPI_FILE_NULL;
- break;
+ fd->mpifd = MPI_FILE_NULL;
+ break;
- case PHDF5:
- hrc = H5Fclose(fd->h5fd);
+ case PHDF5:
+ hrc = H5Fclose(fd->h5fd);
- if (hrc < 0) {
- HDfprintf(stderr, "HDF5 File Close failed\n");
- GOTOERROR(FAIL);
- }
+ if (hrc < 0) {
+ HDfprintf(stderr, "HDF5 File Close failed\n");
+ GOTOERROR(FAIL);
+ }
- fd->h5fd = -1;
- break;
+ fd->h5fd = -1;
+ break;
+
+ default:
+ break;
}
done:
@@ -2619,15 +2637,17 @@ do_cleanupfile(iotype iot, char *fname)
clean_file_g = (getenv("HDF5_NOCLEANUP")==NULL) ? 1 : 0;
if (clean_file_g){
- switch (iot){
- case POSIXIO:
- HDremove(fname);
- break;
- case MPIO:
- case PHDF5:
- MPI_File_delete(fname, h5_io_info_g);
- break;
- }
+ switch (iot){
+ case POSIXIO:
+ HDremove(fname);
+ break;
+ case MPIO:
+ case PHDF5:
+ MPI_File_delete(fname, h5_io_info_g);
+ break;
+ default:
+ break;
+ }
}
}
diff --git a/tools/test/perform/pio_perf.c b/tools/test/perform/pio_perf.c
index 5977731..826e7a9 100644
--- a/tools/test/perform/pio_perf.c
+++ b/tools/test/perform/pio_perf.c
@@ -80,8 +80,13 @@
#define PIO_MPI 0x2
#define PIO_HDF5 0x4
+#ifdef STANDALONE
+#define DBL_EPSILON 2.2204460492503131e-16
+#define H5_DBL_ABS_EQUAL(X,Y) (fabs((X)-(Y)) < DBL_EPSILON)
+#endif
+
/* report 0.0 in case t is zero too */
-#define MB_PER_SEC(bytes,t) (((t)==0.0) ? 0.0 : ((((double)bytes) / ONE_MB) / (t)))
+#define MB_PER_SEC(bytes,t) (H5_DBL_ABS_EQUAL((t), 0.0) ? 0.0 : ((((double)bytes) / ONE_MB) / (t)))
#ifndef TRUE
#define TRUE 1
@@ -311,6 +316,7 @@ static void output_report(const char *fmt, ...);
static void print_indent(register int indent);
static void usage(const char *prog);
static void report_parameters(struct options *opts);
+static off_t squareo(off_t);
/*
* Function: main
@@ -393,6 +399,12 @@ finish:
return exit_value;
}
+off_t
+squareo(off_t x)
+{
+ return x * x;
+}
+
/*
* Function: run_test_loop
* Purpose: Run the I/O tests. Write the results to OUTPUT.
@@ -428,8 +440,8 @@ run_test_loop(struct options *opts)
parms.interleaved = opts->interleaved;
parms.collective = opts->collective;
parms.dim2d = opts->dim2d;
- parms.h5_align = opts->h5_alignment;
- parms.h5_thresh = opts->h5_threshold;
+ parms.h5_align = (hsize_t)opts->h5_alignment;
+ parms.h5_thresh = (hsize_t)opts->h5_threshold;
parms.h5_use_chunks = opts->h5_use_chunks;
parms.h5_write_only = opts->h5_write_only;
parms.verify = opts->verify;
@@ -456,7 +468,7 @@ run_test_loop(struct options *opts)
parms.buf_size = buf_size;
if (parms.dim2d){
- parms.num_bytes = (off_t)pow((double)(opts->num_bpp*parms.num_procs),2);
+ parms.num_bytes = squareo(opts->num_bpp * parms.num_procs);
if (parms.interleaved)
output_report("Transfer Buffer Size: %ldx%ld bytes, File size: %.2f MB\n",
buf_size, opts->blk_size,
@@ -558,6 +570,8 @@ run_test(iotype iot, parameters parms, struct options *opts)
case PHDF5:
output_report("PHDF5 (w/MPI-IO driver)\n");
break;
+ default:
+ break;
}
MPI_Comm_size(pio_comm_g, &comm_size);
@@ -879,7 +893,7 @@ accumulate_minmax_stuff(minmax *mm, int count)
int i;
minmax total_mm;
- total_mm.sum = 0.0;
+ total_mm.sum = 0.0f;
total_mm.max = -DBL_MAX;
total_mm.min = DBL_MAX;
total_mm.num = count;
@@ -1155,10 +1169,10 @@ report_parameters(struct options *opts)
recover_size_and_print((long long)(opts->num_bpp * opts->max_num_procs), "\n");
HDfprintf(output, "rank %d: File size=", rank);
- recover_size_and_print((long long)(pow((double)(opts->num_bpp * opts->min_num_procs),2)
- * opts->num_dsets), ":");
- recover_size_and_print((long long)(pow((double)(opts->num_bpp * opts->max_num_procs),2)
- * opts->num_dsets), "\n");
+ recover_size_and_print((long long)(squareo(opts->num_bpp * opts->min_num_procs)
+ * opts->num_dsets), ":");
+ recover_size_and_print((long long)(squareo(opts->num_bpp * opts->max_num_procs)
+ * opts->num_dsets), "\n");
HDfprintf(output, "rank %d: Transfer buffer size=", rank);
if(opts->interleaved){
@@ -1322,7 +1336,7 @@ parse_command_line(int argc, char *argv[])
break;
#endif /* 0 */
case 'B':
- cl_opts->blk_size = parse_size_directive(opt_arg);
+ cl_opts->blk_size = (size_t)parse_size_directive(opt_arg);
break;
case 'c':
/* Turn on chunked HDF5 dataset creation */
@@ -1423,10 +1437,10 @@ parse_command_line(int argc, char *argv[])
cl_opts->h5_write_only = TRUE;
break;
case 'x':
- cl_opts->min_xfer_size = parse_size_directive(opt_arg);
+ cl_opts->min_xfer_size = (size_t)parse_size_directive(opt_arg);
break;
case 'X':
- cl_opts->max_xfer_size = parse_size_directive(opt_arg);
+ cl_opts->max_xfer_size = (size_t)parse_size_directive(opt_arg);
break;
case 'h':
case '?':
@@ -1446,13 +1460,13 @@ parse_command_line(int argc, char *argv[])
}
if (cl_opts->max_xfer_size == 0)
- cl_opts->max_xfer_size = cl_opts->num_bpp;
+ cl_opts->max_xfer_size = (size_t)cl_opts->num_bpp;
if (cl_opts->min_xfer_size == 0)
- cl_opts->min_xfer_size = (cl_opts->num_bpp)/2;
+ cl_opts->min_xfer_size = (size_t)(cl_opts->num_bpp)/2;
if (cl_opts->blk_size == 0)
- cl_opts->blk_size = (cl_opts->num_bpp)/2;
+ cl_opts->blk_size = (size_t)(cl_opts->num_bpp)/2;
/* set default if none specified yet */
@@ -1462,15 +1476,15 @@ parse_command_line(int argc, char *argv[])
/* verify parameters sanity. Adjust if needed. */
/* cap xfer_size with bytes per process */
if (!cl_opts->dim2d) {
- if (cl_opts->min_xfer_size > cl_opts->num_bpp)
- cl_opts->min_xfer_size = cl_opts->num_bpp;
- if (cl_opts->max_xfer_size > cl_opts->num_bpp)
- cl_opts->max_xfer_size = cl_opts->num_bpp;
+ if (cl_opts->min_xfer_size > (size_t)cl_opts->num_bpp)
+ cl_opts->min_xfer_size = (size_t)cl_opts->num_bpp;
+ if (cl_opts->max_xfer_size > (size_t)cl_opts->num_bpp)
+ cl_opts->max_xfer_size = (size_t)cl_opts->num_bpp;
}
if (cl_opts->min_xfer_size > cl_opts->max_xfer_size)
cl_opts->min_xfer_size = cl_opts->max_xfer_size;
- if (cl_opts->blk_size > cl_opts->num_bpp )
- cl_opts->blk_size = cl_opts->num_bpp;
+ if (cl_opts->blk_size > (size_t)cl_opts->num_bpp )
+ cl_opts->blk_size = (size_t)cl_opts->num_bpp;
/* check range of number of processes */
if (cl_opts->min_num_procs <= 0)
cl_opts->min_num_procs = 1;
generated by cgit v0.12 at 2024-12-27 21:19:26 (GMT)