[svn-r23347] ported revision 23248:23346 from the trunk

44 files changed, 1976 insertions, 1634 deletions

diff --git a/tools/Makefile.in b/tools/Makefile.in
index 70e11ae..46c7d53 100644
--- a/tools/Makefile.in
+++ b/tools/Makefile.in
@@ -228,6 +228,7 @@ H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
 HAVE_DMALLOC = @HAVE_DMALLOC@
 HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
 HDF5_HL = @HDF5_HL@
 HDF5_INTERFACES = @HDF5_INTERFACES@
 HDF_CXX = @HDF_CXX@
@@ -279,7 +280,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
 PATH_SEPARATOR = @PATH_SEPARATOR@
 PERL = @PERL@
-PTHREAD = @PTHREAD@
 RANLIB = @RANLIB@
 ROOT = @ROOT@
 RUNPARALLEL = @RUNPARALLEL@
diff --git a/tools/h5copy/CMakeLists.txt b/tools/h5copy/CMakeLists.txt
index 970cc12..7f68e76 100644
--- a/tools/h5copy/CMakeLists.txt
+++ b/tools/h5copy/CMakeLists.txt
@@ -44,9 +44,6 @@ IF (BUILD_TESTING)
 
   SET (LIST_OTHER_TEST_FILES
       ${HDF5_TOOLS_H5COPY_SOURCE_DIR}/testfiles/h5copy_misc1.out
-      ${HDF5_TOOLS_H5COPY_SOURCE_DIR}/testfiles/h5copy_extlinks_src.out.ls
-      ${HDF5_TOOLS_H5COPY_SOURCE_DIR}/testfiles/h5copy_ref.out.ls
-      ${HDF5_TOOLS_H5COPY_SOURCE_DIR}/testfiles/h5copytst.out.ls
   )
 
   FILE (MAKE_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles")
@@ -62,20 +59,6 @@ IF (BUILD_TESTING)
         ARGS       -E copy_if_different ${listfiles} ${dest}
     )
   ENDFOREACH (listfiles ${LIST_HDF5_TEST_FILES} ${LIST_OTHER_TEST_FILES})
-
-  #
-  # This section can be removed, but leave here for a reference later.
-  # Purpose: '-l3' ignores top 3 lines when copy text file.
-  #
-  #FOREACH (listfiles ${LIST_OTHER_TEST_FILES})
-  #  SET (lsdest "${PROJECT_BINARY_DIR}/testfiles/${listfiles}")
-  #  ADD_CUSTOM_COMMAND (
-  #      TARGET     h5copy
-  #      POST_BUILD
-  #      COMMAND    ${XLATE_UTILITY}
-  #      ARGS       ${HDF5_TOOLS_H5COPY_SOURCE_DIR}/testfiles/${listfiles} ${lsdest} -l3
-  #  )
-  #ENDFOREACH (listfiles ${LIST_OTHER_TEST_FILES})
   
 ##############################################################################
 ##############################################################################
@@ -86,89 +69,189 @@ IF (BUILD_TESTING)
   #
   # Perform h5copy according to passing parmeters
   #
-  MACRO (ADD_H5_F_TEST testname resultcode infile outfile fparam vparam sparam srcname dparam dstname)
+  MACRO (ADD_H5_F_TEST testname resultcode infile fparam vparam sparam srcname dparam dstname)
+    IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+      # Remove any output file left over from previous test run
+      ADD_TEST (
+          NAME H5COPY_F-${testname}-clear-objects
+          COMMAND    ${CMAKE_COMMAND}
+              -E remove 
+              ./testfiles/${testname}.out.h5
+      )
+    ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+
     ADD_TEST (
         NAME H5COPY_F-${testname}
-        COMMAND $<TARGET_FILE:h5copy> -f ${fparam} -i ./testfiles/${infile} -o ./testfiles/${outfile} ${vparam} ${sparam} ${srcname} ${dparam} ${dstname} ${ARGN}
+        COMMAND $<TARGET_FILE:h5copy> -f ${fparam} -i ./testfiles/${infile} -o ./testfiles/${testname}.out.h5 ${vparam} ${sparam} ${srcname} ${dparam} ${dstname} ${ARGN}
     )
-    IF (NOT "${last_test}" STREQUAL "")
-      SET_TESTS_PROPERTIES (H5COPY_F-${testname} PROPERTIES DEPENDS ${last_test})
-    ENDIF (NOT "${last_test}" STREQUAL "")
-    SET (last_test "H5COPY_F-${testname}")
-    ADD_H5_DIFF_TEST (${testname} ${resultcode} ${last_test} ${infile} ${outfile} ${srcname} ${dstname})
+    IF (HDF5_ENABLE_USING_MEMCHECKER)
+      IF (NOT "${last_test}" STREQUAL "")
+        SET_TESTS_PROPERTIES (H5COPY_F-${testname} PROPERTIES DEPENDS ${last_test})
+      ENDIF (NOT "${last_test}" STREQUAL "")
+    ELSE (HDF5_ENABLE_USING_MEMCHECKER)
+      SET_TESTS_PROPERTIES (H5COPY_F-${testname} PROPERTIES DEPENDS H5COPY_F-${testname}-clear-objects)
+    ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
+
+    # resultcode=2 will cause the test to skip the diff test
+    IF (NOT ${resultcode} STREQUAL "2")
+      ADD_TEST (
+          NAME H5COPY_F-${testname}-DIFF
+          COMMAND $<TARGET_FILE:h5diff> -q ./testfiles/${infile} ./testfiles/${testname}.out.h5 ${srcname} ${dstname}
+      )
+      SET_TESTS_PROPERTIES(H5COPY_F-${testname}-DIFF PROPERTIES DEPENDS H5COPY_F-${testname})
+      IF (${resultcode} STREQUAL "1")
+        SET_TESTS_PROPERTIES (H5COPY_F-${testname}-DIFF PROPERTIES WILL_FAIL "true")
+      ENDIF (${resultcode} STREQUAL "1")
+    ENDIF (NOT ${resultcode} STREQUAL "2")
   ENDMACRO (ADD_H5_F_TEST)
   
-  MACRO (ADD_H5_TEST testname resultcode infile outfile vparam sparam srcname dparam dstname)
+  MACRO (ADD_H5_TEST testname resultcode infile vparam sparam srcname dparam dstname)
+    IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+      # Remove any output file left over from previous test run
+      ADD_TEST (
+          NAME H5COPY-${testname}-clear-objects
+          COMMAND    ${CMAKE_COMMAND}
+              -E remove 
+              ./testfiles/${testname}.out.h5
+      )
+    ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+
     ADD_TEST (
         NAME H5COPY-${testname}
-        COMMAND $<TARGET_FILE:h5copy> -i ./testfiles/${infile} -o ./testfiles/${outfile} ${vparam} ${sparam} ${srcname} ${dparam} ${dstname} ${ARGN}
+        COMMAND $<TARGET_FILE:h5copy> -i ./testfiles/${infile} -o ./testfiles/${testname}.out.h5 ${vparam} ${sparam} ${srcname} ${dparam} ${dstname} ${ARGN}
     )
-    IF (NOT "${last_test}" STREQUAL "")
-      SET_TESTS_PROPERTIES (H5COPY-${testname} PROPERTIES DEPENDS ${last_test})
-    ENDIF (NOT "${last_test}" STREQUAL "")
-    SET (last_test "H5COPY-${testname}")
-    ADD_H5_DIFF_TEST (${testname} ${resultcode} ${last_test} ${infile} ${outfile} ${srcname} ${dstname})
+    IF (HDF5_ENABLE_USING_MEMCHECKER)
+      IF (NOT "${last_test}" STREQUAL "")
+        SET_TESTS_PROPERTIES (H5COPY-${testname} PROPERTIES DEPENDS ${last_test})
+      ENDIF (NOT "${last_test}" STREQUAL "")
+    ELSE (HDF5_ENABLE_USING_MEMCHECKER)
+      SET_TESTS_PROPERTIES (H5COPY-${testname} PROPERTIES DEPENDS H5COPY-${testname}-clear-objects)
+    ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
+
+    # resultcode=2 will cause the test to skip the diff test
+    IF (NOT ${resultcode} STREQUAL "2")
+      ADD_TEST (
+          NAME H5COPY-${testname}-DIFF
+          COMMAND $<TARGET_FILE:h5diff> -q ./testfiles/${infile} ./testfiles/${testname}.out.h5 ${srcname} ${dstname}
+      )
+      SET_TESTS_PROPERTIES(H5COPY-${testname}-DIFF PROPERTIES DEPENDS H5COPY-${testname})
+      IF (${resultcode} STREQUAL "1")
+        SET_TESTS_PROPERTIES (H5COPY-${testname}-DIFF PROPERTIES WILL_FAIL "true")
+      ENDIF (${resultcode} STREQUAL "1")
+    ENDIF (NOT ${resultcode} STREQUAL "2")
   ENDMACRO (ADD_H5_TEST)
   
-  MACRO (ADD_H5_DIFF_TEST testname resultcode testdepends infile outfile srcname dstname)
+  MACRO (ADD_H5_TEST2 testname resultcode infile  psparam pdparam vparam sparam srcname dparam dstname)
+    IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+      # Remove any output file left over from previous test run
+      ADD_TEST (
+          NAME H5COPY-${testname}-clear-objects
+          COMMAND    ${CMAKE_COMMAND}
+              -E remove 
+              ./testfiles/${testname}.out.h5
+      )
+    ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+
+    ADD_TEST (
+        NAME H5COPY-${testname}-prefill
+        COMMAND $<TARGET_FILE:h5copy> -i ./testfiles/${infile} -o ./testfiles/${testname}.out.h5 -v -s ${psparam} -d ${pdparam}
+    )
+    IF (HDF5_ENABLE_USING_MEMCHECKER)
+      IF (NOT "${last_test}" STREQUAL "")
+        SET_TESTS_PROPERTIES (H5COPY-${testname}-prefill PROPERTIES DEPENDS ${last_test})
+      ENDIF (NOT "${last_test}" STREQUAL "")
+    ELSE (HDF5_ENABLE_USING_MEMCHECKER)
+      SET_TESTS_PROPERTIES (H5COPY-${testname}-prefill PROPERTIES DEPENDS H5COPY-${testname}-clear-objects)
+    ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
+
+    ADD_TEST (
+        NAME H5COPY-${testname}
+        COMMAND $<TARGET_FILE:h5copy> -i ./testfiles/${infile} -o ./testfiles/${testname}.out.h5 ${vparam} ${sparam} ${srcname} ${dparam} ${dstname} ${ARGN}
+    )
+    SET_TESTS_PROPERTIES (H5COPY-${testname} PROPERTIES DEPENDS H5COPY-${testname}-prefill)
     # resultcode=2 will cause the test to skip the diff test
     IF (NOT ${resultcode} STREQUAL "2")
       ADD_TEST (
-          NAME H5COPY-DIFF_${testname}
-          COMMAND $<TARGET_FILE:h5diff> -q ./testfiles/${infile} ./testfiles/${outfile} ${srcname} ${dstname}
+          NAME H5COPY-${testname}-DIFF
+          COMMAND $<TARGET_FILE:h5diff> -q ./testfiles/${infile} ./testfiles/${testname}.out.h5 ${srcname} ${dstname}
       )
-      SET_TESTS_PROPERTIES(H5COPY-DIFF_${testname} PROPERTIES DEPENDS ${testdepends})
-      SET (last_test "H5COPY-DIFF_${testname}")
+      SET_TESTS_PROPERTIES(H5COPY-${testname}-DIFF PROPERTIES DEPENDS H5COPY-${testname})
       IF (${resultcode} STREQUAL "1")
-        SET_TESTS_PROPERTIES (H5COPY-DIFF_${testname} PROPERTIES WILL_FAIL "true")
+        SET_TESTS_PROPERTIES (H5COPY-${testname}-DIFF PROPERTIES WILL_FAIL "true")
       ENDIF (${resultcode} STREQUAL "1")
     ENDIF (NOT ${resultcode} STREQUAL "2")
-  ENDMACRO (ADD_H5_DIFF_TEST)
+  ENDMACRO (ADD_H5_TEST2)
+  
+  MACRO (ADD_H5_TEST_SAME testname resultcode pfile psparam pdparam vparam sparam srcname dparam dstname)
+    IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+      # Remove any output file left over from previous test run
+      ADD_TEST (
+          NAME H5COPY_SAME-${testname}-clear-objects
+          COMMAND    ${CMAKE_COMMAND}
+              -E remove 
+              ./testfiles/${testname}.out.h5
+      )
+    ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
 
-  #
-  # Test result with h5ls
-  #
-  MACRO (ADD_H5LS_TEST file filetest)
-    # If using memchecker add tests without using scripts
+    ADD_TEST (
+        NAME H5COPY_SAME-${testname}-prefill
+        COMMAND $<TARGET_FILE:h5copy> -i ./testfiles/${pfile} -o ./testfiles/${testname}.out.h5 -v -s ${psparam} -d ${pdparam}
+    )
     IF (HDF5_ENABLE_USING_MEMCHECKER)
-      ADD_TEST (NAME H5COPY-h5ls_${file}-${filetest} COMMAND $<TARGET_FILE:h5ls> -Svr ./testfiles/${file}.out.h5)
+      IF (NOT "${last_test}" STREQUAL "")
+        SET_TESTS_PROPERTIES (H5COPY_SAME-${testname}-prefill PROPERTIES DEPENDS ${last_test})
+      ENDIF (NOT "${last_test}" STREQUAL "")
     ELSE (HDF5_ENABLE_USING_MEMCHECKER)
+      SET_TESTS_PROPERTIES (H5COPY_SAME-${testname}-prefill PROPERTIES DEPENDS H5COPY_SAME-${testname}-clear-objects)
+    ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
+
+    ADD_TEST (
+        NAME H5COPY_SAME-${testname}
+        COMMAND $<TARGET_FILE:h5copy> -i ./testfiles/${testname}.out.h5 -o ./testfiles/${testname}.out.h5 ${vparam} ${sparam} ${srcname} ${dparam} ${dstname} ${ARGN}
+    )
+    SET_TESTS_PROPERTIES (H5COPY_SAME-${testname} PROPERTIES DEPENDS H5COPY_SAME-${testname}-prefill)
+    # resultcode=2 will cause the test to skip the diff test
+    IF (NOT ${resultcode} STREQUAL "2")
       ADD_TEST (
-          NAME H5COPY-h5ls_${file}-${filetest}
-          COMMAND "${CMAKE_COMMAND}"
-              -D "TEST_PROGRAM=$<TARGET_FILE:h5ls>"
-              -D "TEST_ARGS=-Svr;./testfiles/${file}.out.h5"
-              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-              -D "TEST_OUTPUT=./testfiles/${file}.out.out"
-              -D "TEST_EXPECT=0"
-              -D "TEST_REFERENCE=./testfiles/${file}.out.ls"
-              -D "TEST_MASK=true"
-              -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
+          NAME H5COPY_SAME-${testname}-DIFF
+          COMMAND $<TARGET_FILE:h5diff> -q ./testfiles/${testname}.out.h5 ./testfiles/${testname}.out.h5 ${srcname} ${dstname}
       )
-    ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
-    IF (NOT "${last_test}" STREQUAL "")
-      SET_TESTS_PROPERTIES (H5COPY-h5ls_${file}-${filetest} PROPERTIES DEPENDS ${last_test})
-    ENDIF (NOT "${last_test}" STREQUAL "")
-    SET (last_test "H5COPY-h5ls_${file}-${filetest}")
-  ENDMACRO (ADD_H5LS_TEST)
+      SET_TESTS_PROPERTIES(H5COPY_SAME-${testname}-DIFF PROPERTIES DEPENDS H5COPY_SAME-${testname})
+      IF (${resultcode} STREQUAL "1")
+        SET_TESTS_PROPERTIES (H5COPY_SAME-${testname}-DIFF PROPERTIES WILL_FAIL "true")
+      ENDIF (${resultcode} STREQUAL "1")
+    ENDIF (NOT ${resultcode} STREQUAL "2")
+  ENDMACRO (ADD_H5_TEST_SAME)
 
   #
   # Similiar to ADD_H5_TEST macro. Compare to outputs from source & target
   # files instead of checking with h5ls.
   #
-  MACRO (ADD_H5_CMP_TEST testname resultcode infile outfile vparam sparam srcname dparam dstname)
+  MACRO (ADD_H5_CMP_TEST testname resultcode infile vparam sparam srcname dparam dstname)
     # If using memchecker add tests without using scripts
     IF (HDF5_ENABLE_USING_MEMCHECKER)
-      ADD_TEST (NAME H5COPY-CMP-${testname} COMMAND $<TARGET_FILE:h5copy> -i ./testfiles/${infile} -o ./testfiles/${outfile} ${vparam} ${sparam} ${srcname} ${dparam} ${dstname} ${ARGN})
+      ADD_TEST (NAME H5COPY-CMP-${testname} COMMAND $<TARGET_FILE:h5copy> -i ./testfiles/${infile} -o ./testfiles/${testname}.out.h5 ${vparam} ${sparam} ${srcname} ${dparam} ${dstname} ${ARGN})
       IF (${resultcode} STREQUAL "1")
         SET_TESTS_PROPERTIES (H5COPY-CMP-${testname} PROPERTIES WILL_FAIL "true")
       ENDIF (${resultcode} STREQUAL "1")
+      IF (NOT "${last_test}" STREQUAL "")
+        SET_TESTS_PROPERTIES (H5COPY-CMP-${testname} PROPERTIES DEPENDS ${last_test})
+      ENDIF (NOT "${last_test}" STREQUAL "")
     ELSE (HDF5_ENABLE_USING_MEMCHECKER)
+      # Remove any output file left over from previous test run
+      ADD_TEST (
+          NAME H5COPY-CMP-${testname}-clear-objects
+          COMMAND    ${CMAKE_COMMAND}
+              -E remove 
+              ./testfiles/${testname}.out.h5
+              ./testfiles/${testname}.out.out
+              ./testfiles/${testname}.out.out.err
+      )
       ADD_TEST (
           NAME H5COPY-CMP-${testname}
           COMMAND "${CMAKE_COMMAND}"
               -D "TEST_PROGRAM=$<TARGET_FILE:h5copy>"
-              -D "TEST_ARGS=-i;./testfiles/${infile};-o;./testfiles/${outfile};${vparam};${sparam};${srcname};${dparam};${dstname}"
+              -D "TEST_ARGS=-i;./testfiles/${infile};-o;./testfiles/${testname}.out.h5;${vparam};${sparam};${srcname};${dparam};${dstname}"
               -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
               -D "TEST_OUTPUT=./testfiles/${testname}.out.out"
               -D "TEST_EXPECT=${resultcode}"
@@ -176,11 +259,8 @@ IF (BUILD_TESTING)
               -D "TEST_MASK=true"
               -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
       )
+      SET_TESTS_PROPERTIES (H5COPY-CMP-${testname} PROPERTIES DEPENDS H5COPY-CMP-${testname}-clear-objects)
     ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
-    IF (NOT "${last_test}" STREQUAL "")
-      SET_TESTS_PROPERTIES (H5COPY-CMP-${testname} PROPERTIES DEPENDS ${last_test})
-    ENDIF (NOT "${last_test}" STREQUAL "")
-    SET (last_test "H5COPY-CMP-${testname}")
   ENDMACRO (ADD_H5_CMP_TEST)
 
 ##############################################################################
@@ -197,172 +277,135 @@ IF (BUILD_TESTING)
   SET (HDF_EXT_SRC_FILE h5copy_extlinks_src)
   SET (HDF_EXT_TRG_FILE h5copy_extlinks_trg)
 
-  # Remove any output file left over from previous test run
-  ADD_TEST (
-      NAME H5COPY-clearall-objects
-      COMMAND    ${CMAKE_COMMAND}
-          -E remove 
-          ./testfiles/${HDF_FILE1}.out.h5
-          ./testfiles/${HDF_FILE1}.out.out
-          ./testfiles/${HDF_FILE1}.out.out.err
-          ./testfiles/${HDF_FILE2}.out.h5
-          ./testfiles/${HDF_FILE2}.out.out
-          ./testfiles/${HDF_FILE2}.out.out.err
-          ./testfiles/${HDF_EXT_SRC_FILE}.out.h5
-          ./testfiles/${HDF_EXT_SRC_FILE}.out.out
-          ./testfiles/${HDF_EXT_SRC_FILE}.out.out.err
-  )
-  IF (NOT "${last_test}" STREQUAL "")
-    SET_TESTS_PROPERTIES (H5COPY-clearall-objects PROPERTIES DEPENDS ${last_test})
-  ENDIF (NOT "${last_test}" STREQUAL "")
-  SET (last_test "H5COPY-clearall-objects")
+  IF (HDF5_ENABLE_USING_MEMCHECKER)
+    # Remove any output file left over from previous test run
+    ADD_TEST (
+        NAME H5COPY-clearall-objects
+        COMMAND    ${CMAKE_COMMAND}
+            -E remove 
+            simple.out.h5
+            chunk.out.h5
+            compact.out.h5
+            compound.out.h5
+            compressed.out.h5
+            named_vl.out.h5
+            nested_vl.out.h5
+            simple_top.out.h5
+            dsrename.out.h5
+            grp_empty.out.h5
+            grp_dsets.out.h5
+            grp_nested.out.h5
+            simple_group.out.h5
+            grp_rename.out.h5
+            grp_dsets_rename.out.h5
+            A_B1_simple.out.h5
+            A_B2_simple2.out.h5
+            C_D_simple.out.h5
+            E_F_grp_dsets.out.h5
+            G_H_grp_nested.out.h5
+            region_ref.out.h5
+            ext_link.out.h5
+            ext_link_f.out.h5
+            ext_dangle_noobj.out.h5
+            ext_dangle_noobj_f.out.h5
+            ext_dangle_nofile.out.h5
+            ext_dangle_nofile_f.out.h5
+            ext_link_group.out.h5
+            ext_link_group_f.out.h5
+            samefile1.out.h5
+            samefile2.out.h5
+            h5copy_misc1.out.h5
+            h5copy_misc1.out.out
+            h5copy_misc1.out.out.err
+    )
+    SET_TESTS_PROPERTIES (H5COPY-clearall-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles")
+    IF (NOT "${last_test}" STREQUAL "")
+      SET_TESTS_PROPERTIES (H5COPY-clearall-objects PROPERTIES DEPENDS ${last_test})
+    ENDIF (NOT "${last_test}" STREQUAL "")
+    SET (last_test "H5COPY-clearall-objects")
+  ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
   
   # "Test copying various forms of datasets"
-  ADD_H5_TEST (simple 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s simple -d simple)
-  ADD_H5_TEST (chunk 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s chunk -d chunk)
-  ADD_H5_TEST (compact 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s compact -d compact)
-  ADD_H5_TEST (compound 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s compound -d compound)
-  ADD_H5_TEST (compressed 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s compressed -d compressed)
-  ADD_H5_TEST (named_vl 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s named_vl -d named_vl)
-  ADD_H5_TEST (nested_vl 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s nested_vl -d nested_vl)
+  ADD_H5_TEST (simple 0 ${HDF_FILE1}.h5 -v -s simple -d simple)
+  ADD_H5_TEST (chunk 0 ${HDF_FILE1}.h5 -v -s chunk -d chunk)
+  ADD_H5_TEST (compact 0 ${HDF_FILE1}.h5 -v -s compact -d compact)
+  ADD_H5_TEST (compound 0 ${HDF_FILE1}.h5 -v -s compound -d compound)
+  ADD_H5_TEST (compressed 0 ${HDF_FILE1}.h5 -v -s compressed -d compressed)
+  ADD_H5_TEST (named_vl 0 ${HDF_FILE1}.h5 -v -s named_vl -d named_vl)
+  ADD_H5_TEST (nested_vl 0 ${HDF_FILE1}.h5 -v -s nested_vl -d nested_vl)
 
   # "Test copying dataset within group in source file to root of destination"
-  ADD_H5_TEST (simple_top 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s grp_dsets/simple -d simple_top)
+  ADD_H5_TEST (simple_top 0 ${HDF_FILE1}.h5 -v -s grp_dsets/simple -d simple_top)
 
   # "Test copying & renaming dataset"
-  ADD_H5_TEST (rename 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s compound -d rename)
+  ADD_H5_TEST (dsrename 0 ${HDF_FILE1}.h5 -v -s compound -d rename)
 
   # "Test copying empty, 'full' & 'nested' groups"
-  ADD_H5_TEST (grp_empty 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s grp_empty -d grp_empty)
-  ADD_H5_TEST (grp_dsets 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s grp_dsets -d grp_dsets)
-  ADD_H5_TEST (grp_nested 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s grp_nested -d grp_nested)
+  ADD_H5_TEST (grp_empty 0 ${HDF_FILE1}.h5 -v -s grp_empty -d grp_empty)
+  ADD_H5_TEST (grp_dsets 0 ${HDF_FILE1}.h5 -v -s grp_dsets -d grp_dsets)
+  ADD_H5_TEST (grp_nested 0 ${HDF_FILE1}.h5 -v -s grp_nested -d grp_nested)
 
   # "Test copying dataset within group in source file to group in destination"
-  ADD_H5_TEST (simple_group 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s /grp_dsets/simple -d /grp_dsets/simple_group)
+  ADD_H5_TEST2 (simple_group 0 ${HDF_FILE1}.h5 grp_dsets grp_dsets -v -s /grp_dsets/simple -d /grp_dsets/simple_group)
 
   # "Test copying & renaming group"
-  ADD_H5_TEST (grp_rename 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s grp_dsets -d grp_rename)
+  ADD_H5_TEST (grp_rename 0 ${HDF_FILE1}.h5 -v -s grp_dsets -d grp_rename)
 
   # "Test copying 'full' group hierarchy into group in destination file"
-  ADD_H5_TEST (grp_dsets_rename 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s grp_dsets -d /grp_rename/grp_dsets)
+  ADD_H5_TEST2 (grp_dsets_rename 0 ${HDF_FILE1}.h5 grp_dsets grp_rename -v -s grp_dsets -d /grp_rename/grp_dsets)
 
   # "Test copying objects into group hier. that doesn't exist yet in destination file"
-  ADD_H5_TEST (A_B1_simple 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -vp -s simple -d /A/B1/simple)
-  ADD_H5_TEST (A_B2_simple2 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -vp -s simple -d /A/B2/simple2)
-  ADD_H5_TEST (C_D_simple 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -vp -s /grp_dsets/simple -d /C/D/simple)
-  ADD_H5_TEST (E_F_grp_dsets 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -vp -s /grp_dsets -d /E/F/grp_dsets)
-  ADD_H5_TEST (G_H_grp_nested 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -vp -s /grp_nested -d /G/H/grp_nested)
-
-  # Verify that the file created above is correct
-  ADD_H5LS_TEST (${HDF_FILE1} basic)
+  ADD_H5_TEST (A_B1_simple 0 ${HDF_FILE1}.h5 -vp -s simple -d /A/B1/simple)
+  ADD_H5_TEST (A_B2_simple2 0 ${HDF_FILE1}.h5 -vp -s simple -d /A/B2/simple2)
+  ADD_H5_TEST (C_D_simple 0 ${HDF_FILE1}.h5 -vp -s /grp_dsets/simple -d /C/D/simple)
+  ADD_H5_TEST (E_F_grp_dsets 0 ${HDF_FILE1}.h5 -vp -s /grp_dsets -d /E/F/grp_dsets)
+  ADD_H5_TEST (G_H_grp_nested 0 ${HDF_FILE1}.h5 -vp -s /grp_nested -d /G/H/grp_nested)
   
 ############# COPY REFERENCES ##############
 
-  # Remove any output file left over from previous test run
-  ADD_TEST (
-      NAME H5COPY-clear-refs
-      COMMAND    ${CMAKE_COMMAND}
-          -E remove 
-          ./testfiles/${HDF_FILE2}.out.h5
-          ./testfiles/${HDF_FILE2}.out.out
-          ./testfiles/${HDF_FILE2}.out.out.err
-  )
-  IF (NOT "${last_test}" STREQUAL "")
-    SET_TESTS_PROPERTIES (H5COPY-clear-refs PROPERTIES DEPENDS ${last_test})
-  ENDIF (NOT "${last_test}" STREQUAL "")
-  SET (last_test "H5COPY-clear-refs")
-
   # "Test copying object and region references"
-  ADD_H5_F_TEST (region_ref 2 ${HDF_FILE2}.h5 ${HDF_FILE2}.out.h5 ref -v -s / -d /COPY)
-
-  # Verify that the file created above is correct
-  ADD_H5LS_TEST (${HDF_FILE2} refs)
+  ADD_H5_F_TEST (region_ref 2 ${HDF_FILE2}.h5 ref -v -s / -d /COPY)
 
 ############# COPY EXT LINKS ############## 
 
-  # Remove any output file left over from previous test run
-  ADD_TEST (
-      NAME H5COPY-clear-ext-links
-      COMMAND    ${CMAKE_COMMAND}
-          -E remove 
-          ./testfiles/${HDF_EXT_SRC_FILE}.out.h5
-          ./testfiles/${HDF_EXT_SRC_FILE}.out.out
-          ./testfiles/${HDF_EXT_SRC_FILE}.out.out.err
-  )
-  IF (NOT "${last_test}" STREQUAL "")
-    SET_TESTS_PROPERTIES (H5COPY-clear-ext-links PROPERTIES DEPENDS ${last_test})
-  ENDIF (NOT "${last_test}" STREQUAL "")
-  SET (last_test "H5COPY-clear-ext-links")
-
   # "Test copying external link directly without -f ext"
-  ADD_H5_TEST (ext_link 2 ${HDF_EXT_SRC_FILE}.h5 ${HDF_EXT_SRC_FILE}.out.h5 -v -s /group_ext/extlink_dset -d /copy1_dset)
+  ADD_H5_TEST (ext_link 2 ${HDF_EXT_SRC_FILE}.h5 -v -s /group_ext/extlink_dset -d /copy1_dset)
 
   # "Test copying external link directly with -f ext"
-  ADD_H5_F_TEST (ext_link_f 2 ${HDF_EXT_SRC_FILE}.h5 ${HDF_EXT_SRC_FILE}.out.h5 ext -v -s /group_ext/extlink_dset -d /copy2_dset)
+  ADD_H5_F_TEST (ext_link_f 2 ${HDF_EXT_SRC_FILE}.h5 ext -v -s /group_ext/extlink_dset -d /copy2_dset)
 
   # "Test copying dangling external link (no obj) directly without -f ext"
-  ADD_H5_TEST (ext_dangle_noobj 2 ${HDF_EXT_SRC_FILE}.h5 ${HDF_EXT_SRC_FILE}.out.h5 -v -s /group_ext/extlink_notyet1 -d /copy_dangle1_1)
+  ADD_H5_TEST (ext_dangle_noobj 2 ${HDF_EXT_SRC_FILE}.h5 -v -s /group_ext/extlink_notyet1 -d /copy_dangle1_1)
 
   # "Test copying dangling external link (no obj) directly with -f ext"
-  ADD_H5_F_TEST (ext_dangle_noobj_f 2 ${HDF_EXT_SRC_FILE}.h5 ${HDF_EXT_SRC_FILE}.out.h5 ext -v -s /group_ext/extlink_notyet1 -d /copy_dangle1_2)
+  ADD_H5_F_TEST (ext_dangle_noobj_f 2 ${HDF_EXT_SRC_FILE}.h5 ext -v -s /group_ext/extlink_notyet1 -d /copy_dangle1_2)
 
   # "Test copying dangling external link (no file) directly without -f ext"
-  ADD_H5_TEST (ext_dangle_nofile 2 ${HDF_EXT_SRC_FILE}.h5 ${HDF_EXT_SRC_FILE}.out.h5 -v -s /group_ext/extlink_notyet2 -d /copy_dangle2_1)
+  ADD_H5_TEST (ext_dangle_nofile 2 ${HDF_EXT_SRC_FILE}.h5 -v -s /group_ext/extlink_notyet2 -d /copy_dangle2_1)
 
   # "Test copying dangling external link (no file) directly with -f ext"
-  ADD_H5_F_TEST (ext_dangle_nofile_f 2 ${HDF_EXT_SRC_FILE}.h5 ${HDF_EXT_SRC_FILE}.out.h5 ext -v -s /group_ext/extlink_notyet2 -d /copy_dangle2_2)
+  ADD_H5_F_TEST (ext_dangle_nofile_f 2 ${HDF_EXT_SRC_FILE}.h5 ext -v -s /group_ext/extlink_notyet2 -d /copy_dangle2_2)
 
   # "Test copying a group contains external links without -f ext"
-  ADD_H5_TEST (ext_link_group 2 ${HDF_EXT_SRC_FILE}.h5 ${HDF_EXT_SRC_FILE}.out.h5 -v -s /group_ext -d /copy1_group)
+  ADD_H5_TEST (ext_link_group 2 ${HDF_EXT_SRC_FILE}.h5 -v -s /group_ext -d /copy1_group)
 
   # "Test copying a group contains external links with -f ext"
-  ADD_H5_F_TEST (ext_link_group_f 2 ${HDF_EXT_SRC_FILE}.h5 ${HDF_EXT_SRC_FILE}.out.h5 ext -v -s /group_ext -d /copy2_group) 
-
-  # Verify that the file created above is correct
-  ADD_H5LS_TEST (${HDF_EXT_SRC_FILE} links)
+  ADD_H5_F_TEST (ext_link_group_f 2 ${HDF_EXT_SRC_FILE}.h5 ext -v -s /group_ext -d /copy2_group) 
 
 ############# Test misc. ############## 
-  # Remove any output file left over from previous test run
-  ADD_TEST (
-      NAME H5COPY-clear-misc
-      COMMAND    ${CMAKE_COMMAND}
-          -E remove 
-          ./testfiles/h5copy_misc1.out.out
-          ./testfiles/h5copy_misc1.out.out.err
-          ./testfiles/${HDF_FILE1}.out.h5
-  )
-  IF (NOT "${last_test}" STREQUAL "")
-    SET_TESTS_PROPERTIES (H5COPY-clear-misc PROPERTIES DEPENDS ${last_test})
-  ENDIF (NOT "${last_test}" STREQUAL "")
-  SET (last_test "H5COPY-clear-misc")
 
   #-----------------------------------------------------------------
   # "Test copying object into group which doesn't exist, without -p"
   #
-  ADD_H5_CMP_TEST (h5copy_misc1 1 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s /simple -d /g1/g2/simple)
-  # Remove any output file left over from previous test run
-  ADD_TEST (
-      NAME H5COPY-clear-samefile
-      COMMAND    ${CMAKE_COMMAND}
-          -E remove 
-          ./testfiles/${HDF_FILE1}.out.h5
-  )
-  IF (NOT "${last_test}" STREQUAL "")
-    SET_TESTS_PROPERTIES (H5COPY-clear-samefile PROPERTIES DEPENDS ${last_test})
-  ENDIF (NOT "${last_test}" STREQUAL "")
-  SET (last_test "H5COPY-clear-samefile")
+  ADD_H5_CMP_TEST (h5copy_misc1 1 ${HDF_FILE1}.h5 -v -s /simple -d /g1/g2/simple)
   
   #-------------------------------------------
   # "Test copying objects to the same file "
   #
-  # create temporary test file with some objects
-  ADD_H5_TEST (samefile1_pre 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s /simple -d /simple)
-  ADD_H5_TEST (samefile2_pre 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s /grp_dsets -d /grp_dsets)
-  # actual test cases
   # - dataset
-  ADD_H5_TEST (samefile1 0 ${HDF_FILE1}.out.h5 ${HDF_FILE1}.out.h5 -v -s /simple -d /simple_cp)
+  ADD_H5_TEST_SAME (samefile1 0 ${HDF_FILE1}.h5 /simple /simple -v -s /simple -d /simple_cp)
   # - group with some datasets
-  ADD_H5_TEST (samefile2 0 ${HDF_FILE1}.out.h5 ${HDF_FILE1}.out.h5 -v -s /grp_dsets -d /grp_dsets_cp)
+  ADD_H5_TEST_SAME (samefile2 0 ${HDF_FILE1}.h5 /grp_dsets /grp_dsets -v -s /grp_dsets -d /grp_dsets_cp)
 ENDIF (BUILD_TESTING)
 
 ##############################################################################
diff --git a/tools/h5copy/Makefile.in b/tools/h5copy/Makefile.in
index da9d0b7..3278f80 100644
--- a/tools/h5copy/Makefile.in
+++ b/tools/h5copy/Makefile.in
@@ -234,6 +234,7 @@ H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
 HAVE_DMALLOC = @HAVE_DMALLOC@
 HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
 HDF5_HL = @HDF5_HL@
 HDF5_INTERFACES = @HDF5_INTERFACES@
 HDF_CXX = @HDF_CXX@
@@ -285,7 +286,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
 PATH_SEPARATOR = @PATH_SEPARATOR@
 PERL = @PERL@
-PTHREAD = @PTHREAD@
 RANLIB = @RANLIB@
 ROOT = @ROOT@
 RUNPARALLEL = @RUNPARALLEL@
diff --git a/tools/h5copy/testfiles/h5copy_misc1.out b/tools/h5copy/testfiles/h5copy_misc1.out
index 10dd1a6..1624f2b 100644
--- a/tools/h5copy/testfiles/h5copy_misc1.out
+++ b/tools/h5copy/testfiles/h5copy_misc1.out
@@ -1,3 +1,3 @@
-Copying file <./testfiles/h5copytst.h5> and object </simple> to file <./testfiles/h5copytst.out.h5> and object </g1/g2/simple>
+Copying file <./testfiles/h5copytst.h5> and object </simple> to file <./testfiles/h5copy_misc1.out.h5> and object </g1/g2/simple>
 Error in copy...Exiting
 h5copy error: group </g1> doesn't exist. Use -p to create parent groups.
diff --git a/tools/h5copy/testh5copy.sh.in b/tools/h5copy/testh5copy.sh.in
index c7acd9a..d30d8d8 100644
--- a/tools/h5copy/testh5copy.sh.in
+++ b/tools/h5copy/testh5copy.sh.in
@@ -57,9 +57,6 @@ $SRC_H5COPY_TESTFILES/h5copy_extlinks_trg.h5
 
 # List of expect files that will be copied over to local test dir
 LIST_OTHER_TEST_FILES="
-$SRC_H5COPY_TESTFILES/h5copy_extlinks_src.out.ls
-$SRC_H5COPY_TESTFILES/h5copy_ref.out.ls
-$SRC_H5COPY_TESTFILES/h5copytst.out.ls
 $SRC_H5COPY_TESTFILES/h5copy_misc1.out
 "
 
@@ -151,15 +148,6 @@ VERIFY()
 # Print a line-line message left justified in a field of 70 characters
 # beginning with the word "Verifying".
 #
-VERIFY_H5LS() 
-{
-    SPACES="                                                               "
-    echo "Verifying h5ls file structure $* $SPACES" | cut -c1-70 | tr -d '\012'
-}
-
-# Print a line-line message left justified in a field of 70 characters
-# beginning with the word "Verifying".
-#
 VERIFY_OUTPUT() 
 {
     SPACES="                                                               "
@@ -183,24 +171,34 @@ TOOLTEST()
 {
     actualout="$TESTDIR/tooltest.actualout"
     actualerr="$TESTDIR/tooltest.actualerr"
-     runh5diff=yes
-     if [ "$1" = -i ]; then
-      inputfile=$2
-     else
-      runh5diff=no
-     fi
-     if [ "$3" = -o ]; then
-      outputfile=$4
-     else 
-      runh5diff=no
-     fi
+    runh5diff=yes
+    if [ "$1" = -i ]; then
+        inputfile=$2
+    else
+        if [ "$1" = -f ]; then
+            inputfile=$4
+        else
+            inputfile=$3
+        fi
+        runh5diff=no
+    fi
+    if [ "$3" = -o ]; then
+        outputfile=$4
+    else 
+        if [ "$1" = -f ]; then
+            outputfile=$6
+        else
+            outputfile=$5
+        fi
+        runh5diff=no
+    fi
   
     TESTING $H5COPY $@
     (
-    echo "#############################"
-    echo " output for '$H5COPY $@'"
-    echo "#############################"
-    $RUNSERIAL $H5COPY_BIN $@
+        echo "#############################"
+        echo " output for '$H5COPY $@'"
+        echo "#############################"
+        $RUNSERIAL $H5COPY_BIN $@
     ) > $actualout 2> $actualerr
     RET=$?
     if [ $RET != 0 ]; then
@@ -210,15 +208,141 @@ TOOLTEST()
         nerrors="`expr $nerrors + 1`"
     else
         echo " PASSED"
+    
+        if [ $runh5diff != no ]; then
+            H5DIFFTEST $inputfile $outputfile $7 $9
+        fi
 
         # Clean up output file
         if test -z "$HDF5_NOCLEANUP"; then
-           rm -f $actualout $actualerr
+            rm -f $actualout $actualerr $outputfile
+        fi
+    fi
+}
+
+# TOOLTEST back-to-back
+TOOLTEST_PREFILL() 
+{
+    actualout="$TESTDIR/tooltest.actualout"
+    actualerr="$TESTDIR/tooltest.actualerr"
+    runh5diff=yes
+    if [ "$1" = -i ]; then
+        inputfile=$2
+    else
+        runh5diff=no
+    fi
+    if [ "$3" = -o ]; then
+        outputfile=$4
+    else 
+        runh5diff=no
+    fi
+    
+    grp_name=$5
+    grp_name2=$6
+    obj_name=$7
+    obj_name2=$8
+  
+    TESTING $H5COPY $@
+    (
+        echo "#############################"
+        echo " output for '$H5COPY $@'"
+        echo "#############################"
+        $RUNSERIAL $H5COPY_BIN  -i $inputfile -o $outputfile -v -s $grp_name -d $grp_name2 
+    ) > $actualout 2> $actualerr
+    RET=$?
+    if [ $RET != 0 ]; then
+        echo "*FAILED*"
+        echo "failed result is:"
+        cat $actualout
+        nerrors="`expr $nerrors + 1`"
+    else
+        TESTING $H5COPY $@
+        (
+            echo "#############################"
+            echo " output for '$H5COPY $@'"
+            echo "#############################"
+            $RUNSERIAL $H5COPY_BIN  -i $inputfile -o $outputfile -v -s $obj_name -d $obj_name2 
+        ) > $actualout 2> $actualerr
+        RET=$?
+        if [ $RET != 0 ]; then
+            echo "*FAILED*"
+            echo "failed result is:"
+            cat $actualout
+            nerrors="`expr $nerrors + 1`"
+        else
+            echo " PASSED"
+    
+            if [ $runh5diff != no ]; then
+                H5DIFFTEST $inputfile $outputfile $obj_name $obj_name2
+            fi
+        
+            # Clean up output file
+            if test -z "$HDF5_NOCLEANUP"; then
+                rm -f $actualout $actualerr $outputfile
+            fi
         fi
     fi
+}
+
+# TOOLTEST back-to-back
+TOOLTEST_SAME() 
+{
+    actualout="$TESTDIR/tooltest.actualout"
+    actualerr="$TESTDIR/tooltest.actualerr"
+    runh5diff=yes
+    if [ "$1" = -i ]; then
+        inputfile=$2
+    else
+        runh5diff=no
+    fi
+    if [ "$3" = -o ]; then
+        outputfile=$4
+    else 
+        runh5diff=no
+    fi
     
-    if [ $runh5diff != no ]; then
-     H5DIFFTEST $inputfile $outputfile $7 $9
+    grp_name=$5
+    grp_name2=$6
+  
+    TESTING $H5COPY $@
+    (
+        echo "#############################"
+        echo " output for '$H5COPY $@'"
+        echo "#############################"
+        $RUNSERIAL $H5COPY_BIN  -i $inputfile -o $outputfile -v -s $grp_name -d $grp_name 
+    ) > $actualout 2> $actualerr
+    RET=$?
+    if [ $RET != 0 ]; then
+        echo "*FAILED*"
+        echo "failed result is:"
+        cat $actualout
+        nerrors="`expr $nerrors + 1`"
+    else
+        TESTING $H5COPY $@
+        (
+            echo "#############################"
+            echo " output for '$H5COPY $@'"
+            echo "#############################"
+            $RUNSERIAL $H5COPY_BIN  -i $outputfile -o $outputfile -v -s $grp_name -d $grp_name2 
+        ) > $actualout 2> $actualerr
+        RET=$?
+        if [ $RET != 0 ]; then
+            echo "*FAILED*"
+            echo "failed result is:"
+            cat $actualout
+            nerrors="`expr $nerrors + 1`"
+        else
+            echo " PASSED"
+    
+            if [ $runh5diff != no ]; then
+                H5DIFFTEST $outputfile $outputfile $grp_name $grp_name2
+            fi
+        
+            # Clean up output file
+            if test -z "$HDF5_NOCLEANUP"; then
+                rm -f $actualout $actualerr $outputfile
+            fi
+        fi
     fi
 }
 
@@ -259,18 +383,18 @@ TOOLTEST_FAIL()
     actualerr_sav=${actualerr}-sav
     shift
     if [ "$1" = -i ]; then
-      inputfile=$2
+        inputfile=$2
     fi
     if [ "$3" = -o ]; then
-      outputfile=$4
+        outputfile=$4
     fi
 
     TESTING $H5COPY $@
     (
-    #echo "#############################"
-    #echo " output for '$H5COPY $@'"
-    #echo "#############################"
-    $RUNSERIAL $H5COPY_BIN $@
+        #echo "#############################"
+        #echo " output for '$H5COPY $@'"
+        #echo "#############################"
+        $RUNSERIAL $H5COPY_BIN $@
     ) > $actualout 2> $actualerr
 
     RET=$?
@@ -298,7 +422,7 @@ TOOLTEST_FAIL()
 
     # Clean up output file
     if test -z "$HDF5_NOCLEANUP"; then
-       rm -f $actualout $actualerr $actualout_sav $actualerr_sav
+        rm -f $actualout $actualerr $actualout_sav $actualerr_sav $outputfile
     fi
 }
 
@@ -311,10 +435,10 @@ H5DIFFTEST()
     $RUNSERIAL $H5DIFF_BIN -q "$@" 
     RET=$?
     if [ $RET != 0 ] ; then
-         echo "*FAILED*"
-         nerrors="`expr $nerrors + 1`"
+        echo "*FAILED*"
+        nerrors="`expr $nerrors + 1`"
     else
-         echo " PASSED"
+        echo " PASSED"
     fi
 }
 
@@ -327,50 +451,13 @@ H5DIFFTEST_FAIL()
     RET=$?
 
     if [ $h5haveexitcode = 'yes' -a $RET != 1 ] ; then
-         echo "*FAILED*"
-         nerrors="`expr $nerrors + 1`"
+        echo "*FAILED*"
+        nerrors="`expr $nerrors + 1`"
     else
-         echo " PASSED"
+        echo " PASSED"
     fi
 }
 
-# Call the h5ls tool to verify the correct output data in the destination file
-#
-H5LSTEST() 
-{
-    expect="$TESTDIR/`basename $1 .h5`.ls"
-    actual="$TESTDIR/`basename $1 .h5`.ls.actualout"
-
-    # Stderr is included in stdout so that the diff can detect
-    # any unexpected output from that stream too.
-    #
-    # Note:  The modification time and storage utilization are masked off
-    #   so that the output is more portable
-    VERIFY_H5LS  $@
-    (
-      $RUNSERIAL $H5LS_BIN $H5LS_ARGS $@
-    ) 2>&1 |sed 's/Modified:.*/Modified:  XXXX-XX-XX XX:XX:XX XXX/' |sed 's/Storage:.*/Storage:   <details removed for portability>/' >$actual
-
-
-   if [ ! -f $expect ]; then
-    # Create the expect file if it doesn't yet exist.
-    echo " CREATED"
-    cp $actual $expect
-   elif $CMP $expect $actual; then
-      echo " PASSED"
-   else
-      echo "*FAILED*"
-      echo "    Expected result (*.ls) differs from actual result (*.out)"
-      nerrors="`expr $nerrors + 1`"
-      test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/    /'
-   fi
-
-   # Clean up output file
-   if test -z "$HDF5_NOCLEANUP"; then
-      rm -f $actual $actual_err
-   fi
-}
-
 # Copy single datasets of various forms from one group to another,
 #       adding object copied to the destination file each time
 #
@@ -379,82 +466,54 @@ H5LSTEST()
 COPY_OBJECTS() 
 {
     TESTFILE="$TESTDIR/h5copytst.h5"
-    FILEOUT="$TESTDIR/`basename h5copytst.h5 .h5`.out.h5"
-
-    # Remove any output file left over from previous test run
-    rm -f $FILEOUT
 
-    echo "Testing from `basename $TESTFILE` to `basename $FILEOUT` for the following tests:"
     echo "Test copying various forms of datasets"
-    TOOLTEST -i $TESTFILE -o $FILEOUT -v -s simple     -d simple
-    TOOLTEST -i $TESTFILE -o $FILEOUT -v -s chunk      -d chunk
-    TOOLTEST -i $TESTFILE -o $FILEOUT -v -s compact    -d compact
-    TOOLTEST -i $TESTFILE -o $FILEOUT -v -s compound   -d compound
-    TOOLTEST -i $TESTFILE -o $FILEOUT -v -s compressed -d compressed
-    TOOLTEST -i $TESTFILE -o $FILEOUT -v -s named_vl   -d named_vl
-    TOOLTEST -i $TESTFILE -o $FILEOUT -v -s nested_vl  -d nested_vl
+    TOOLTEST -i $TESTFILE -o $TESTDIR/simple.out.h5 -v -s simple     -d simple
+    TOOLTEST -i $TESTFILE -o $TESTDIR/chunk.out.h5 -v -s chunk      -d chunk
+    TOOLTEST -i $TESTFILE -o $TESTDIR/compact.out.h5 -v -s compact    -d compact
+    TOOLTEST -i $TESTFILE -o $TESTDIR/compound.out.h5 -v -s compound   -d compound
+    TOOLTEST -i $TESTFILE -o $TESTDIR/compressed.out.h5 -v -s compressed -d compressed
+    TOOLTEST -i $TESTFILE -o $TESTDIR/named_vl.out.h5 -v -s named_vl   -d named_vl
+    TOOLTEST -i $TESTFILE -o $TESTDIR/nested_vl.out.h5 -v -s nested_vl  -d nested_vl
 
     echo "Test copying dataset within group in source file to root of destination"
-    TOOLTEST -i $TESTFILE -o $FILEOUT -v -s grp_dsets/simple  -d simple_top
+    TOOLTEST -i $TESTFILE -o $TESTDIR/simple_top.out.h5 -v -s grp_dsets/simple  -d simple_top
 
     echo "Test copying & renaming dataset"
-    TOOLTEST -i $TESTFILE -o $FILEOUT -v -s compound   -d rename
+    TOOLTEST -i $TESTFILE -o $TESTDIR/dsrename.out.h5 -v -s compound   -d rename
 
     echo "Test copying empty, 'full' & 'nested' groups"
-    TOOLTEST -i $TESTFILE -o $FILEOUT -v -s grp_empty  -d grp_empty
-    TOOLTEST -i $TESTFILE -o $FILEOUT -v -s grp_dsets  -d grp_dsets
-    TOOLTEST -i $TESTFILE -o $FILEOUT -v -s grp_nested -d grp_nested
+    TOOLTEST -i $TESTFILE -o $TESTDIR/grp_empty.out.h5 -v -s grp_empty  -d grp_empty
+    TOOLTEST -i $TESTFILE -o $TESTDIR/grp_dsets.out.h5 -v -s grp_dsets  -d grp_dsets
+    TOOLTEST -i $TESTFILE -o $TESTDIR/grp_nested.out.h5 -v -s grp_nested -d grp_nested
 
     echo "Test copying dataset within group in source file to group in destination"
-    TOOLTEST -i $TESTFILE -o $FILEOUT -v -s /grp_dsets/simple  -d /grp_dsets/simple_group
+    TOOLTEST_PREFILL -i $TESTFILE -o $TESTDIR/simple_group.out.h5 grp_dsets grp_dsets /grp_dsets/simple /grp_dsets/simple_group
 
     echo "Test copying & renaming group"
-    TOOLTEST -i $TESTFILE -o $FILEOUT -v -s grp_dsets  -d grp_rename
+    TOOLTEST -i $TESTFILE -o $TESTDIR/grp_rename.out.h5 -v -s grp_dsets  -d grp_rename
 
     echo "Test copying 'full' group hierarchy into group in destination file"
-    TOOLTEST -i $TESTFILE -o $FILEOUT -v -s grp_dsets  -d /grp_rename/grp_dsets
+    TOOLTEST_PREFILL -i $TESTFILE -o $TESTDIR/grp_dsets_rename.out.h5 grp_dsets grp_rename grp_dsets /grp_rename/grp_dsets
 
     echo "Test copying objects into group hier. that doesn't exist yet in destination file"
-    TOOLTEST -i $TESTFILE -o $FILEOUT -vp -s simple    -d /A/B1/simple
-    TOOLTEST -i $TESTFILE -o $FILEOUT -vp -s simple    -d /A/B2/simple2
-    TOOLTEST -i $TESTFILE -o $FILEOUT -vp -s /grp_dsets/simple    -d /C/D/simple
-    TOOLTEST -i $TESTFILE -o $FILEOUT -vp -s /grp_dsets -d /E/F/grp_dsets
-    TOOLTEST -i $TESTFILE -o $FILEOUT -vp -s /grp_nested -d /G/H/grp_nested
-
-    # Verify that the file created above is correct
-    H5LSTEST $FILEOUT
-
-    # Remove output file created, if the "no cleanup" environment variable is
-    #   not defined
-    if test -z "$HDF5_NOCLEANUP"; then
-        rm -f $FILEOUT
-    fi
+    TOOLTEST -i $TESTFILE -o $TESTDIR/A_B1_simple.out.h5 -vp -s simple    -d /A/B1/simple
+    TOOLTEST -i $TESTFILE -o $TESTDIR/A_B2_simple2.out.h5 -vp -s simple    -d /A/B2/simple2
+    TOOLTEST -i $TESTFILE -o $TESTDIR/C_D_simple.out.h5 -vp -s /grp_dsets/simple    -d /C/D/simple
+    TOOLTEST -i $TESTFILE -o $TESTDIR/E_F_grp_dsets.out.h5 -vp -s /grp_dsets -d /E/F/grp_dsets
+    TOOLTEST -i $TESTFILE -o $TESTDIR/G_H_grp_nested.out.h5 -vp -s /grp_nested -d /G/H/grp_nested
 }
 
 # Copy references in various way.
-# adding to the destination file each time compare the result
 #
 # Assumed arguments:
 # <none>
 COPY_REFERENCES() 
 {
     TESTFILE="$TESTDIR/h5copy_ref.h5"
-    FILEOUT="$TESTDIR/`basename h5copy_ref.h5 .h5`.out.h5"
-
-    # Remove any output file left over from previous test run
-    rm -f $FILEOUT
 
     echo "Test copying object and region references"
-    TOOLTEST -f ref -i $TESTFILE -o $FILEOUT -v -s / -d /COPY
-
-    # Verify that the file created above is correct
-    H5LSTEST $FILEOUT
-
-    # Remove output file created, if the "no cleanup" environment variable is
-    #   not defined
-    if test -z "$HDF5_NOCLEANUP"; then
-        rm -f $FILEOUT
-    fi
+    TOOLTEST_F -f ref -i $TESTFILE -o $TESTDIR/region_ref.out.h5 -v -s / -d /COPY
 }
 
 # Copy external links.
@@ -465,43 +524,30 @@ COPY_REFERENCES()
 COPY_EXT_LINKS() 
 {
     TESTFILE="$TESTDIR/h5copy_extlinks_src.h5"
-    FILEOUT="$TESTDIR/`basename h5copy_extlinks_src.h5 .h5`.out.h5"
-
-    # Remove any output file left over from previous test run
-    rm -f $FILEOUT
 
     echo "Test copying external link directly without -f ext"
-    TOOLTEST -v -i $TESTFILE -o $FILEOUT -s /group_ext/extlink_dset -d /copy1_dset
+    TOOLTEST -v -i $TESTFILE -o $TESTDIR/ext_link.out.h5 -s /group_ext/extlink_dset -d /copy1_dset
 
     echo "Test copying external link directly with -f ext"
-    TOOLTEST -f ext -i $TESTFILE -o $FILEOUT -v -s /group_ext/extlink_dset -d /copy2_dset
+    TOOLTEST_F -f ext -i $TESTFILE -o $TESTDIR/ext_link_f.out.h5 -v -s /group_ext/extlink_dset -d /copy2_dset
 
     echo "Test copying dangling external link (no obj) directly without -f ext"
-    TOOLTEST -v -i $TESTFILE -o $FILEOUT -s /group_ext/extlink_notyet1 -d /copy_dangle1_1
+    TOOLTEST -v -i $TESTFILE -o $TESTDIR/ext_dangle_noobj.out.h5 -s /group_ext/extlink_notyet1 -d /copy_dangle1_1
 
     echo "Test copying dangling external link (no obj) directly with -f ext"
-    TOOLTEST -f ext -i $TESTFILE -o $FILEOUT -v -s /group_ext/extlink_notyet1 -d /copy_dangle1_2
+    TOOLTEST_F -f ext -i $TESTFILE -o $TESTDIR/ext_dangle_noobj_f.out.h5 -v -s /group_ext/extlink_notyet1 -d /copy_dangle1_2
 
     echo "Test copying dangling external link (no file) directly without -f ext"
-    TOOLTEST -v -i $TESTFILE -o $FILEOUT -s /group_ext/extlink_notyet2 -d /copy_dangle2_1
+    TOOLTEST -v -i $TESTFILE -o $TESTDIR/ext_dangle_nofile.out.h5 -s /group_ext/extlink_notyet2 -d /copy_dangle2_1
 
     echo "Test copying dangling external link (no file) directly with -f ext"
-    TOOLTEST -f ext -i $TESTFILE -o $FILEOUT -v -s /group_ext/extlink_notyet2 -d /copy_dangle2_2
+    TOOLTEST_F -f ext -i $TESTFILE -o $TESTDIR/ext_dangle_nofile_f.out.h5 -v -s /group_ext/extlink_notyet2 -d /copy_dangle2_2
 
     echo "Test copying a group contains external links without -f ext"
-    TOOLTEST -v -i $TESTFILE -o $FILEOUT -s /group_ext -d /copy1_group
+    TOOLTEST -v -i $TESTFILE -o $TESTDIR/ext_link_group.out.h5 -s /group_ext -d /copy1_group
 
     echo "Test copying a group contains external links with -f ext"
-    TOOLTEST -f ext -v -i $TESTFILE -o $FILEOUT -s /group_ext -d /copy2_group
-
-    # Verify that the file created above is correct
-    H5LSTEST $FILEOUT
-
-    # Remove output file created, if the "no cleanup" environment variable is
-    #   not defined
-    if test -z "$HDF5_NOCLEANUP"; then
-        rm -f $FILEOUT
-    fi
+    TOOLTEST_F -f ext -i $TESTFILE -o $TESTDIR/ext_link_group_f.out.h5 -v -s /group_ext -d /copy2_group
 }
 
 # Test misc.
@@ -511,28 +557,13 @@ COPY_EXT_LINKS()
 TEST_MISC() 
 {
     TESTFILE="$TESTDIR/h5copytst.h5"
-    FILEOUT="$TESTDIR/`basename h5copytst.h5 .h5`.out.h5"
-
-    # Remove any output file left over from previous test run
-    rm -f $FILEOUT
 
     echo "Test copying object into group which doesn't exist, without -p"
-    TOOLTEST_FAIL h5copy_misc1.out -v -i $TESTFILE -o $FILEOUT -s /simple  -d /g1/g2/simple
+    TOOLTEST_FAIL h5copy_misc1.out -i $TESTFILE -o $TESTDIR/h5copy_misc1.out.h5 -v -s /simple  -d /g1/g2/simple
 
     echo "Test copying objects to the same file "
-    rm -f $FILEOUT
-    # create temporary test file ($FILEOUT) with some objects
-    TOOLTEST -i $TESTFILE -o $FILEOUT -v -s /simple -d /simple 
-    TOOLTEST -i $TESTFILE -o $FILEOUT -v -s /grp_dsets  -d /grp_dsets
-    # actual test cases
-    TOOLTEST -i $FILEOUT -o $FILEOUT -v -s /simple -d /simple_cp
-    TOOLTEST -i $FILEOUT -o $FILEOUT -v -s /grp_dsets  -d /grp_dsets_cp
-
-    # Remove output file created, if the "no cleanup" environment variable is
-    #   not defined
-    if test -z "$HDF5_NOCLEANUP"; then
-        rm -f $FILEOUT
-    fi
+    TOOLTEST_SAME -i $TESTFILE -o $TESTDIR/samefile1.out.h5 /simple /simple_cp 
+    TOOLTEST_SAME -i $TESTFILE -o $TESTDIR/samefile2.out.h5 /grp_dsets /grp_dsets_cp
 }
 
 ##############################################################################
diff --git a/tools/h5diff/CMakeLists.txt b/tools/h5diff/CMakeLists.txt
index 87eca15..8eb5ad1 100644
--- a/tools/h5diff/CMakeLists.txt
+++ b/tools/h5diff/CMakeLists.txt
@@ -344,10 +344,9 @@ IF (BUILD_TESTING)
       IF (NOT "${last_test}" STREQUAL "")
         SET_TESTS_PROPERTIES (H5DIFF-${resultfile} PROPERTIES DEPENDS ${last_test})
       ENDIF (NOT "${last_test}" STREQUAL "")
-      SET (last_test "H5DIFF-${resultfile}")
     ELSE (HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
-          NAME H5DIFF-clear-${resultfile}-objects
+          NAME H5DIFF-${resultfile}-clear-objects
           COMMAND    ${CMAKE_COMMAND}
               -E remove ./testfiles/${resultfile}.out ./testfiles/${resultfile}.out.err
       )
@@ -363,7 +362,7 @@ IF (BUILD_TESTING)
               -D "TEST_APPEND=EXIT CODE:"
               -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
       )
-      SET_TESTS_PROPERTIES (H5DIFF-${resultfile} PROPERTIES DEPENDS "H5DIFF-clear-${resultfile}-objects")
+      SET_TESTS_PROPERTIES (H5DIFF-${resultfile} PROPERTIES DEPENDS "H5DIFF-${resultfile}-clear-objects")
     ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
     IF (H5_HAVE_PARALLEL)
       ADD_PH5_TEST (${resultfile} ${resultcode} ${ARGN})
@@ -381,10 +380,9 @@ IF (BUILD_TESTING)
       IF (NOT "${last_test}" STREQUAL "")
         SET_TESTS_PROPERTIES (PH5DIFF-${resultfile} PROPERTIES DEPENDS ${last_test})
       ENDIF (NOT "${last_test}" STREQUAL "")
-      SET (last_test "PH5DIFF-${resultfile}")
     ELSE (HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
-          NAME PH5DIFF-clear-${resultfile}-objects
+          NAME PH5DIFF-${resultfile}-clear-objects
           COMMAND    ${CMAKE_COMMAND}
               -E remove ./testfiles/${resultfile}_p.out ./testfiles/${resultfile}_p.out.err
       )
@@ -402,7 +400,7 @@ IF (BUILD_TESTING)
               -D "TEST_SKIP_COMPARE=TRUE"
               -P "${HDF5_RESOURCES_DIR}/prunTest.cmake"
       )
-      SET_TESTS_PROPERTIES (PH5DIFF-${resultfile} PROPERTIES DEPENDS "PH5DIFF-clear-${resultfile}-objects")
+      SET_TESTS_PROPERTIES (PH5DIFF-${resultfile} PROPERTIES DEPENDS "PH5DIFF-${resultfile}-clear-objects")
     ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
   ENDMACRO (ADD_PH5_TEST file)
 
@@ -413,15 +411,14 @@ IF (BUILD_TESTING)
     # If using memchecker add tests without using scripts
     IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
-          NAME H5DIFF-clear-${testname}-objects
+          NAME H5DIFF-${testname}-clear-objects
           COMMAND    ${CMAKE_COMMAND}
               -E remove ./testfiles/${testname}.out ./testfiles/${testname}.out.err
       )
       # if there was a previous test
       IF (NOT "${last_test}" STREQUAL "")
-        SET_TESTS_PROPERTIES (H5DIFF-clear-${testname}-objects PROPERTIES DEPENDS ${last_test})
+        SET_TESTS_PROPERTIES (H5DIFF-${testname}-clear-objects PROPERTIES DEPENDS ${last_test})
       ENDIF (NOT "${last_test}" STREQUAL "")
-      SET (last_test "H5DIFF-clear-${testname}-objects")
     ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
 
     ADD_TEST (NAME H5DIFF-${testname} COMMAND $<TARGET_FILE:h5diff> ${ARGN})
@@ -429,10 +426,13 @@ IF (BUILD_TESTING)
       SET_TESTS_PROPERTIES (H5DIFF-${testname} PROPERTIES WILL_FAIL "true")
     ENDIF (NOT ${resultcode} STREQUAL "0")
 
-    IF (NOT "${last_test}" STREQUAL "")
-      SET_TESTS_PROPERTIES (H5DIFF-${testname} PROPERTIES DEPENDS ${last_test})
-    ENDIF (NOT "${last_test}" STREQUAL "")
-    SET (last_test "H5DIFF-${testname}")
+    IF (HDF5_ENABLE_USING_MEMCHECKER)
+      IF (NOT "${last_test}" STREQUAL "")
+        SET_TESTS_PROPERTIES (H5DIFF-${testname} PROPERTIES DEPENDS ${last_test})
+      ENDIF (NOT "${last_test}" STREQUAL "")
+    ELSE (HDF5_ENABLE_USING_MEMCHECKER)
+      SET_TESTS_PROPERTIES (H5DIFF-${testname} PROPERTIES DEPENDS H5DIFF-${testname}-clear-objects)
+    ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
   ENDMACRO (ADD_H5_NO_OUTPUT_TEST)
 
 ##############################################################################
@@ -1092,13 +1092,13 @@ ADD_H5_TEST (h5diff_704 1 -v2 ${ATTR_VERBOSE_LEVEL_FILE1} ${ATTR_VERBOSE_LEVEL_F
 ADD_H5_TEST (h5diff_705 1 -v2 ${ATTR_VERBOSE_LEVEL_FILE1} ${ATTR_VERBOSE_LEVEL_FILE2} /dset)
 
 # same attr number , all different attr name
-ADD_H5_TEST (h5diff_706 0 -v2 ${ATTR_VERBOSE_LEVEL_FILE1} ${ATTR_VERBOSE_LEVEL_FILE2} /ntype)
+ADD_H5_TEST (h5diff_706 1 -v2 ${ATTR_VERBOSE_LEVEL_FILE1} ${ATTR_VERBOSE_LEVEL_FILE2} /ntype)
 
 # different attr number , same attr name (intersected)
 ADD_H5_TEST (h5diff_707 1 -v2 ${ATTR_VERBOSE_LEVEL_FILE1} ${ATTR_VERBOSE_LEVEL_FILE2} /g2)
 
 # different attr number , all different attr name 
-ADD_H5_TEST (h5diff_708 0 -v2 ${ATTR_VERBOSE_LEVEL_FILE1} ${ATTR_VERBOSE_LEVEL_FILE2} /g3)
+ADD_H5_TEST (h5diff_708 1 -v2 ${ATTR_VERBOSE_LEVEL_FILE1} ${ATTR_VERBOSE_LEVEL_FILE2} /g3)
 
 # when no attributes exist in both objects
 ADD_H5_TEST (h5diff_709 0 -v2 ${ATTR_VERBOSE_LEVEL_FILE1} ${ATTR_VERBOSE_LEVEL_FILE2} /g4)
diff --git a/tools/h5diff/Makefile.in b/tools/h5diff/Makefile.in
index 4676341..5567ceb 100644
--- a/tools/h5diff/Makefile.in
+++ b/tools/h5diff/Makefile.in
@@ -241,6 +241,7 @@ H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
 HAVE_DMALLOC = @HAVE_DMALLOC@
 HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
 HDF5_HL = @HDF5_HL@
 HDF5_INTERFACES = @HDF5_INTERFACES@
 HDF_CXX = @HDF_CXX@
@@ -292,7 +293,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
 PATH_SEPARATOR = @PATH_SEPARATOR@
 PERL = @PERL@
-PTHREAD = @PTHREAD@
 RANLIB = @RANLIB@
 ROOT = @ROOT@
 RUNPARALLEL = @RUNPARALLEL@
diff --git a/tools/h5diff/testfiles/h5diff_706.txt b/tools/h5diff/testfiles/h5diff_706.txt
index 38eeac5..5825150 100644
--- a/tools/h5diff/testfiles/h5diff_706.txt
+++ b/tools/h5diff/testfiles/h5diff_706.txt
@@ -10,4 +10,4 @@ datatype: </ntype> and </ntype>
     x           integer1       
            x    integer4       
 Attributes status:  0 common, 3 only in obj1, 3 only in obj2
-EXIT CODE: 0
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_708.txt b/tools/h5diff/testfiles/h5diff_708.txt
index add386b..a10a8b7 100644
--- a/tools/h5diff/testfiles/h5diff_708.txt
+++ b/tools/h5diff/testfiles/h5diff_708.txt
@@ -14,4 +14,4 @@ group  : </g3> and </g3>
     x           integer10      
            x    integer3       
 Attributes status:  0 common, 3 only in obj1, 2 only in obj2
-EXIT CODE: 0
+EXIT CODE: 1
diff --git a/tools/h5dump/CMakeLists.txt b/tools/h5dump/CMakeLists.txt
index 56f49ac..3f39ae3 100644
--- a/tools/h5dump/CMakeLists.txt
+++ b/tools/h5dump/CMakeLists.txt
@@ -680,11 +680,11 @@ IF (BUILD_TESTING)
       SET (last_test "H5DUMP-${testname}")
     ELSE (HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
-          NAME H5DUMP-clear-h5dump-${testname}-objects
+          NAME H5DUMP-h5dump-${testname}-clear-objects
           COMMAND    ${CMAKE_COMMAND}
               -E remove h5dump-${testname}.out h5dump-${testname}.out.err
       )
-      SET_TESTS_PROPERTIES (H5DUMP-clear-h5dump-${testname}-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
+      SET_TESTS_PROPERTIES (H5DUMP-h5dump-${testname}-clear-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
       ADD_TEST (
           NAME H5DUMP-h5dump-${testname}
           COMMAND "${CMAKE_COMMAND}"
@@ -696,7 +696,7 @@ IF (BUILD_TESTING)
               -D "TEST_REFERENCE=h5dump-${testname}.txt"
               -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
       )
-      SET_TESTS_PROPERTIES (H5DUMP-h5dump-${testname} PROPERTIES DEPENDS "H5DUMP-clear-h5dump-${testname}-objects")
+      SET_TESTS_PROPERTIES (H5DUMP-h5dump-${testname} PROPERTIES DEPENDS "H5DUMP-h5dump-${testname}-clear-objects")
     ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
   ENDMACRO (ADD_HELP_TEST)
 
@@ -724,14 +724,13 @@ IF (BUILD_TESTING)
       IF (NOT "${last_test}" STREQUAL "")
         SET_TESTS_PROPERTIES (H5DUMP-${resultfile} PROPERTIES DEPENDS ${last_test})
       ENDIF (NOT "${last_test}" STREQUAL "")
-      SET (last_test "H5DUMP-${resultfile}")
     ELSE (HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
-          NAME H5DUMP-clear-${resultfile}-objects
+          NAME H5DUMP-${resultfile}-clear-objects
           COMMAND    ${CMAKE_COMMAND}
-              -E remove ${resultfile}.out ${resultfile}.out.err
+              -E remove ${resultfile}.bin ${resultfile}.out ${resultfile}.out.err
       )
-      SET_TESTS_PROPERTIES (H5DUMP-clear-${resultfile}-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
+      SET_TESTS_PROPERTIES (H5DUMP-${resultfile}-clear-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
       ADD_TEST (
           NAME H5DUMP-${resultfile}
           COMMAND "${CMAKE_COMMAND}"
@@ -743,7 +742,7 @@ IF (BUILD_TESTING)
               -D "TEST_REFERENCE=${resultfile}.ddl"
               -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
       )
-      SET_TESTS_PROPERTIES (H5DUMP-${resultfile} PROPERTIES DEPENDS "H5DUMP-clear-${resultfile}-objects")
+      SET_TESTS_PROPERTIES (H5DUMP-${resultfile} PROPERTIES DEPENDS "H5DUMP-${resultfile}-clear-objects")
     ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
   ENDMACRO (ADD_H5_TEST file)
 
@@ -758,14 +757,13 @@ IF (BUILD_TESTING)
       IF (NOT "${last_test}" STREQUAL "")
         SET_TESTS_PROPERTIES (H5DUMP-${resultfile} PROPERTIES DEPENDS ${last_test})
       ENDIF (NOT "${last_test}" STREQUAL "")
-      SET (last_test "H5DUMP-${resultfile}")
     ELSE (HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
-          NAME H5DUMP-clear-${resultfile}-objects
+          NAME H5DUMP-${resultfile}-clear-objects
           COMMAND    ${CMAKE_COMMAND}
               -E remove ${resultfile}.txt ${resultfile}.out ${resultfile}.out.err
       )
-      SET_TESTS_PROPERTIES (H5DUMP-clear-${resultfile}-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
+      SET_TESTS_PROPERTIES (H5DUMP-${resultfile}-clear-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
       ADD_TEST (
           NAME H5DUMP-${resultfile}
           COMMAND "${CMAKE_COMMAND}"
@@ -777,49 +775,96 @@ IF (BUILD_TESTING)
               -D "TEST_REFERENCE=${resultfile}.ddl"
               -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
       )
-      SET_TESTS_PROPERTIES (H5DUMP-${resultfile} PROPERTIES DEPENDS "H5DUMP-clear-${resultfile}-objects")
+      SET_TESTS_PROPERTIES (H5DUMP-${resultfile} PROPERTIES DEPENDS "H5DUMP-${resultfile}-clear-objects")
       ADD_TEST (
-          NAME H5DUMP-output-cmp-${resultfile}
+          NAME H5DUMP-${resultfile}-output-cmp
           COMMAND ${CMAKE_COMMAND}
                 -E compare_files ${resultfile}.txt ${resultfile}.exp
       )
-      SET_TESTS_PROPERTIES (H5DUMP-output-cmp-${resultfile} PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
-      SET_TESTS_PROPERTIES (H5DUMP-output-cmp-${resultfile} PROPERTIES DEPENDS H5DUMP-${resultfile})
+      SET_TESTS_PROPERTIES (H5DUMP-${resultfile}-output-cmp PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
+      SET_TESTS_PROPERTIES (H5DUMP-${resultfile}-output-cmp PROPERTIES DEPENDS H5DUMP-${resultfile})
     ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
   ENDMACRO (ADD_H5_TEST_EXPORT file)
 
+  MACRO (ADD_H5_TEST_EXPORT_DDL resultfile targetfile resultcode ddlfile)
+    # If using memchecker add tests without using scripts
+    IF (HDF5_ENABLE_USING_MEMCHECKER)
+      ADD_TEST (NAME H5DUMP-${resultfile} COMMAND $<TARGET_FILE:h5dump> --ddl=${ddlfile}.txt ${ARGN} ${resultfile}.txt ${targetfile})
+      SET_TESTS_PROPERTIES (H5DUMP-${resultfile} PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
+      IF (NOT ${resultcode} STREQUAL "0")
+        SET_TESTS_PROPERTIES (H5DUMP-${resultfile} PROPERTIES WILL_FAIL "true")
+      ENDIF (NOT ${resultcode} STREQUAL "0")
+      IF (NOT "${last_test}" STREQUAL "")
+        SET_TESTS_PROPERTIES (H5DUMP-${resultfile} PROPERTIES DEPENDS ${last_test})
+      ENDIF (NOT "${last_test}" STREQUAL "")
+    ELSE (HDF5_ENABLE_USING_MEMCHECKER)
+      ADD_TEST (
+          NAME H5DUMP-${resultfile}-clear-objects
+          COMMAND    ${CMAKE_COMMAND}
+              -E remove ${ddlfile}.txt ${resultfile}.txt ${resultfile}.out ${resultfile}.out.err
+      )
+      SET_TESTS_PROPERTIES (H5DUMP-${resultfile}-clear-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
+      ADD_TEST (
+          NAME H5DUMP-${resultfile}
+          COMMAND "${CMAKE_COMMAND}"
+              -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
+              -D "TEST_ARGS:STRING=--ddl=${ddlfile}.txt;${ARGN};${resultfile}.txt;${targetfile}"
+              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles/std"
+              -D "TEST_OUTPUT=${resultfile}.out"
+              -D "TEST_EXPECT=${resultcode}"
+              -D "TEST_REFERENCE=${resultfile}.ddl"
+              -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
+      )
+      SET_TESTS_PROPERTIES (H5DUMP-${resultfile} PROPERTIES DEPENDS "H5DUMP-${resultfile}-clear-objects")
+      ADD_TEST (
+          NAME H5DUMP-${resultfile}-output-cmp
+          COMMAND ${CMAKE_COMMAND}
+                -E compare_files ${resultfile}.txt ${resultfile}.exp
+      )
+      SET_TESTS_PROPERTIES (H5DUMP-${resultfile}-output-cmp PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
+      SET_TESTS_PROPERTIES (H5DUMP-${resultfile}-output-cmp PROPERTIES DEPENDS H5DUMP-${resultfile})
+      ADD_TEST (
+          NAME H5DUMP-${resultfile}-output-cmp-ddl
+          COMMAND ${CMAKE_COMMAND}
+                -E compare_files ${ddlfile}.txt ${ddlfile}.exp
+      )
+      SET_TESTS_PROPERTIES (H5DUMP-${resultfile}-output-cmp-ddl PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
+      SET_TESTS_PROPERTIES (H5DUMP-${resultfile}-output-cmp-ddl PROPERTIES DEPENDS H5DUMP-${resultfile}-output-cmp)
+    ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
+  ENDMACRO (ADD_H5_TEST_EXPORT_DDL file)
+
   MACRO (ADD_H5_EXPORT_TEST resultfile targetfile resultcode)
-    ADD_TEST (
-        NAME H5DUMP-output-${resultfile}
-        COMMAND $<TARGET_FILE:h5dump> ${ARGN} ${resultfile}.txt ${targetfile}
-    )
-    SET_TESTS_PROPERTIES (H5DUMP-output-${resultfile} PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
-    IF (NOT "${last_test}" STREQUAL "")
-      SET_TESTS_PROPERTIES (H5DUMP-output-${resultfile} PROPERTIES DEPENDS ${last_test})
-    ENDIF (NOT "${last_test}" STREQUAL "")
-    SET (last_test "H5DUMP-output-${resultfile}")
     IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
+          NAME H5DUMP-output-${resultfile}-clear-objects
+          COMMAND    ${CMAKE_COMMAND}
+              -E remove ${resultfile}.txt
+      )
+      SET_TESTS_PROPERTIES (H5DUMP-output-${resultfile}-clear-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
+      ADD_TEST (
+          NAME H5DUMP-output-${resultfile}
+          COMMAND $<TARGET_FILE:h5dump> ${ARGN} ${resultfile}.txt ${targetfile}
+      )
+      SET_TESTS_PROPERTIES (H5DUMP-output-${resultfile} PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
+      SET_TESTS_PROPERTIES (H5DUMP-output-${resultfile} PROPERTIES DEPENDS H5DUMP-output-${resultfile}-clear-objects)
+      ADD_TEST (
           NAME H5DUMP-output-cmp-${resultfile}
           COMMAND ${CMAKE_COMMAND}
                 -E compare_files ${resultfile}.txt ${resultfile}.exp
       )
       SET_TESTS_PROPERTIES (H5DUMP-output-cmp-${resultfile} PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
-      IF (NOT "${last_test}" STREQUAL "")
-        SET_TESTS_PROPERTIES (H5DUMP-output-cmp-${resultfile} PROPERTIES DEPENDS ${last_test})
-      ENDIF (NOT "${last_test}" STREQUAL "")
-      SET (last_test "H5DUMP-output-cmp-${resultfile}")
+      SET_TESTS_PROPERTIES (H5DUMP-output-cmp-${resultfile} PROPERTIES DEPENDS H5DUMP-output-${resultfile})
     ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
   ENDMACRO (ADD_H5_EXPORT_TEST file)
 
   MACRO (ADD_H5_MASK_TEST resultfile resultcode)
     IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
-          NAME H5DUMP-clear-${resultfile}-objects
+          NAME H5DUMP-${resultfile}-clear-objects
           COMMAND    ${CMAKE_COMMAND}
               -E remove ${resultfile}.out ${resultfile}.out.err
       )
-      SET_TESTS_PROPERTIES (H5DUMP-clear-${resultfile}-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
+      SET_TESTS_PROPERTIES (H5DUMP-${resultfile}-clear-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
       ADD_TEST (
           NAME H5DUMP-${resultfile}
           COMMAND "${CMAKE_COMMAND}"
@@ -832,18 +877,18 @@ IF (BUILD_TESTING)
               -D "TEST_MASK_ERROR=true"
               -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
       )
-      SET_TESTS_PROPERTIES (H5DUMP-${resultfile} PROPERTIES DEPENDS "H5DUMP-clear-${resultfile}-objects")
+      SET_TESTS_PROPERTIES (H5DUMP-${resultfile} PROPERTIES DEPENDS "H5DUMP-${resultfile}-clear-objects")
     ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
   ENDMACRO (ADD_H5_MASK_TEST file)
 
   MACRO (ADD_H5ERR_MASK_TEST resultfile resultcode)
     IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
-          NAME H5DUMP-clear-${resultfile}-objects
+          NAME H5DUMP-${resultfile}-clear-objects
           COMMAND    ${CMAKE_COMMAND}
               -E remove ${resultfile}.out ${resultfile}.out.err
       )
-      SET_TESTS_PROPERTIES (H5DUMP-clear-${resultfile}-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles")
+      SET_TESTS_PROPERTIES (H5DUMP-${resultfile}-clear-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
       ADD_TEST (
           NAME H5DUMP-${resultfile}
           COMMAND "${CMAKE_COMMAND}"
@@ -857,10 +902,40 @@ IF (BUILD_TESTING)
               -D "TEST_MASK_ERROR=true"
               -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
       )
-      SET_TESTS_PROPERTIES (H5DUMP-${resultfile} PROPERTIES DEPENDS "H5DUMP-clear-${resultfile}-objects")
+      SET_TESTS_PROPERTIES (H5DUMP-${resultfile} PROPERTIES DEPENDS "H5DUMP-${resultfile}-clear-objects")
     ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
   ENDMACRO (ADD_H5ERR_MASK_TEST file)
 
+  MACRO (ADD_H5_TEST_IMPORT conffile resultfile testfile resultcode)
+    # If using memchecker add tests without using scripts
+    IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+      ADD_TEST (
+          NAME H5DUMP-IMPORT-${resultfile}-clear-objects
+          COMMAND    ${CMAKE_COMMAND}
+              -E remove ${conffile}.out ${conffile}.out.err ${resultfile}.bin ${resultfile}.h5
+      )
+      SET_TESTS_PROPERTIES (H5DUMP-IMPORT-${resultfile}-clear-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
+      ADD_TEST (
+          NAME H5DUMP-IMPORT-${resultfile}
+          COMMAND "${CMAKE_COMMAND}"
+              -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
+              -D "TEST_ARGS:STRING=${ARGN};-o;${resultfile}.bin;${testfile}"
+              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles/std"
+              -D "TEST_OUTPUT=${conffile}.out"
+              -D "TEST_EXPECT=${resultcode}"
+              -D "TEST_REFERENCE=${conffile}.ddl"
+              -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
+      )
+      SET_TESTS_PROPERTIES (H5DUMP-IMPORT-${resultfile} PROPERTIES DEPENDS "H5DUMP-IMPORT-${resultfile}-clear-objects")
+      ADD_TEST (NAME H5DUMP-IMPORT-h5import-${resultfile} COMMAND h5import ${resultfile}.bin -c ${conffile}.out -o ${resultfile}.h5)
+      SET_TESTS_PROPERTIES (H5DUMP-IMPORT-h5import-${resultfile} PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
+      SET_TESTS_PROPERTIES (H5DUMP-IMPORT-h5import-${resultfile} PROPERTIES DEPENDS H5DUMP-IMPORT-${resultfile})
+      ADD_TEST (NAME H5DUMP-IMPORT-h5diff-${resultfile} COMMAND h5diff ${testfile} ${resultfile}.h5 /integer /integer)
+      SET_TESTS_PROPERTIES (H5DUMP-IMPORT-h5diff-${resultfile} PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
+      SET_TESTS_PROPERTIES (H5DUMP-IMPORT-h5diff-${resultfile} PROPERTIES DEPENDS H5DUMP-IMPORT-h5import-${resultfile})
+    ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+  ENDMACRO (ADD_H5_TEST_IMPORT file)
+
   MACRO (ADD_H5_PBITS_TEST resultfile resultcode)
     # If using memchecker add tests without using scripts
     IF (HDF5_ENABLE_USING_MEMCHECKER)
@@ -869,17 +944,16 @@ IF (BUILD_TESTING)
       IF (NOT ${resultcode} STREQUAL "0")
         SET_TESTS_PROPERTIES (H5DUMP-${resultfile} PROPERTIES WILL_FAIL "true")
       ENDIF (NOT ${resultcode} STREQUAL "0")
-      IF (NOT "${last_test}" STREQUAL "")
-        SET_TESTS_PROPERTIES (H5DUMP-${resultfile} PROPERTIES DEPENDS ${last_test})
-      ENDIF (NOT "${last_test}" STREQUAL "")
-      SET (last_test "H5DUMP-${resultfile}")
+      IF (NOT "${last_pbits_test}" STREQUAL "")
+        SET_TESTS_PROPERTIES (H5DUMP-${resultfile} PROPERTIES DEPENDS ${last_pbits_test})
+      ENDIF (NOT "${last_pbits_test}" STREQUAL "")
     ELSE (HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
-          NAME H5DUMP-clear-${resultfile}-objects
+          NAME H5DUMP-${resultfile}-clear-objects
           COMMAND    ${CMAKE_COMMAND}
               -E remove ${resultfile}.out ${resultfile}.out.err
       )
-      SET_TESTS_PROPERTIES (H5DUMP-clear-${resultfile}-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/pbits")
+      SET_TESTS_PROPERTIES (H5DUMP-${resultfile}-clear-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/pbits")
       ADD_TEST (
           NAME H5DUMP-${resultfile}
           COMMAND "${CMAKE_COMMAND}"
@@ -891,7 +965,7 @@ IF (BUILD_TESTING)
               -D "TEST_REFERENCE=${resultfile}.ddl"
               -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
       )
-      SET_TESTS_PROPERTIES (H5DUMP-${resultfile} PROPERTIES DEPENDS "H5DUMP-clear-${resultfile}-objects")
+      SET_TESTS_PROPERTIES (H5DUMP-${resultfile} PROPERTIES DEPENDS "H5DUMP-${resultfile}-clear-objects")
     ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
   ENDMACRO (ADD_H5_PBITS_TEST file)
 
@@ -915,17 +989,16 @@ IF (BUILD_TESTING)
       IF (NOT ${resultcode} STREQUAL "0")
         SET_TESTS_PROPERTIES (H5DUMP-XML-${resultfile} PROPERTIES WILL_FAIL "true")
       ENDIF (NOT ${resultcode} STREQUAL "0")
-      IF (NOT "${last_test}" STREQUAL "")
-        SET_TESTS_PROPERTIES (H5DUMP-XML-${resultfile} PROPERTIES DEPENDS ${last_test})
-      ENDIF (NOT "${last_test}" STREQUAL "")
-      SET (last_test "H5DUMP-XML-${resultfile}")
+      IF (NOT "${last_xml_test}" STREQUAL "")
+        SET_TESTS_PROPERTIES (H5DUMP-XML-${resultfile} PROPERTIES DEPENDS ${last_xml_test})
+      ENDIF (NOT "${last_xml_test}" STREQUAL "")
     ELSE (HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
-          NAME H5DUMP-XML-clear-${resultfile}-objects
+          NAME H5DUMP-XML-${resultfile}-clear-objects
           COMMAND    ${CMAKE_COMMAND}
               -E remove ${resultfile}.out ${resultfile}.out.err
       )
-      SET_TESTS_PROPERTIES (H5DUMP-XML-clear-${resultfile}-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/xml")
+      SET_TESTS_PROPERTIES (H5DUMP-XML-${resultfile}-clear-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/xml")
       ADD_TEST (
           NAME H5DUMP-XML-${resultfile}
           COMMAND "${CMAKE_COMMAND}"
@@ -937,7 +1010,7 @@ IF (BUILD_TESTING)
               -D "TEST_REFERENCE=${resultfile}.xml"
               -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
       )
-      SET_TESTS_PROPERTIES (H5DUMP-XML-${resultfile} PROPERTIES DEPENDS "H5DUMP-XML-clear-${resultfile}-objects")
+      SET_TESTS_PROPERTIES (H5DUMP-XML-${resultfile} PROPERTIES DEPENDS "H5DUMP-XML-${resultfile}-clear-objects")
     ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
   ENDMACRO (ADD_XML_H5_TEST file)
 
@@ -1017,6 +1090,8 @@ IF (BUILD_TESTING)
           tattrreg.out.err
           tattrregR.out
           tattrregR.out.err
+          tbin1LE.bin
+          tbinregR.txt
           tbinregR.out
           tbinregR.out.err
           tbigdims.out
@@ -1151,7 +1226,7 @@ IF (BUILD_TESTING)
           tnoddlfile.out.err
           trawdatafile.out
           trawdatafile.out.err
-          twithddlfile.txt
+          trawdatafile.txt
           tno-subset.out
           tno-subset.out.err
           tnullspace.out
@@ -1268,22 +1343,7 @@ IF (BUILD_TESTING)
   ADD_H5_TEST_EXPORT (trawdatafile packedbits.h5 0 --enable-error-stack -y -o)
   ADD_H5_TEST_EXPORT (tnoddlfile packedbits.h5 0 --enable-error-stack -O -y -o)
 
-  IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-    ADD_TEST (
-        NAME H5DUMP-clear-twithddlfile-export
-        COMMAND    ${CMAKE_COMMAND}
-            -E remove twithddl.txt
-    )
-    SET_TESTS_PROPERTIES (H5DUMP-clear-twithddlfile-export PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
-    ADD_H5_TEST_EXPORT (twithddlfile packedbits.h5 0 --enable-error-stack --ddl=twithddl.txt -y -o)
-    ADD_TEST (
-        NAME H5DUMP-output-cmp-meta-twithddlfile
-        COMMAND ${CMAKE_COMMAND}
-            -E compare_files twithddl.txt twithddl.exp
-    )
-    SET_TESTS_PROPERTIES (H5DUMP-output-cmp-meta-twithddlfile PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
-    SET_TESTS_PROPERTIES (H5DUMP-output-cmp-meta-twithddlfile PROPERTIES DEPENDS "H5DUMP-clear-twithddlfile-export")
-  ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+  ADD_H5_TEST_EXPORT_DDL (twithddlfile packedbits.h5 0 twithddl --enable-error-stack --ddl=twithddl.txt -y -o)
   
   # test for maximum display datasets
   ADD_H5_TEST (twidedisplay 0 --enable-error-stack -w0 packedbits.h5)
@@ -1534,110 +1594,32 @@ IF (BUILD_TESTING)
   ADD_H5_TEST (tvms 0 --enable-error-stack tvms.h5)
 
   # test for binary output
-  ADD_H5_TEST (tbin1LE 0 --enable-error-stack -d integer -o out1LE.bin -b LE tbinary.h5)
+  ADD_H5_TEST (tbin1LE 0 --enable-error-stack -d integer -o tbin1LE.bin -b LE tbinary.h5)
 
   # test for string binary output
   ADD_H5_EXPORT_TEST (tstr2bin2 tstr2.h5 0 --enable-error-stack -d /g2/dset2 -b -o)
   ADD_H5_EXPORT_TEST (tstr2bin6 tstr2.h5 0 --enable-error-stack -d /g6/dset6 -b -o)
 
   # NATIVE default. the NATIVE test can be validated with h5import/h5diff
-  ADD_TEST (NAME H5DUMP-clear-objects-tbin1 COMMAND ${CMAKE_COMMAND} -E remove out1.bin)
-  SET_TESTS_PROPERTIES (H5DUMP-clear-objects-tbin1 PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
-  IF (HDF5_ENABLE_USING_MEMCHECKER)
-    IF (NOT "${last_test}" STREQUAL "")
-      SET_TESTS_PROPERTIES (H5DUMP-clear-objects-tbin1 PROPERTIES DEPENDS ${last_test})
-    ENDIF (NOT "${last_test}" STREQUAL "")
-  ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
-  ADD_H5_TEST (tbin1 0 --enable-error-stack -d integer -o out1.bin -b tbinary.h5)
-  IF (HDF5_ENABLE_USING_MEMCHECKER)
-    SET_TESTS_PROPERTIES (H5DUMP-tbin1 PROPERTIES DEPENDS H5DUMP-clear-objects-tbin1)
-    SET (last_test "H5DUMP-tbin1")
-  ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
-  
-  IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-    ADD_TEST (NAME H5DUMP-clear-out1D COMMAND ${CMAKE_COMMAND} -E remove ./testfiles/std/out1D.h5)
-    SET_TESTS_PROPERTIES (H5DUMP-clear-out1D PROPERTIES DEPENDS H5DUMP-tbin1)
-    ADD_TEST (NAME H5DUMP-h5import-out1D COMMAND h5import out1.bin -c tbin1.out -o out1D.h5)
-    SET_TESTS_PROPERTIES (H5DUMP-h5import-out1D PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
-    SET_TESTS_PROPERTIES (H5DUMP-h5import-out1D PROPERTIES DEPENDS H5DUMP-clear-out1D)
-    ADD_TEST (NAME H5DUMP-h5diff-out1D COMMAND h5diff tbinary.h5 out1D.h5 /integer /integer)
-    SET_TESTS_PROPERTIES (H5DUMP-h5diff-out1D PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
-    SET_TESTS_PROPERTIES (H5DUMP-h5diff-out1D PROPERTIES DEPENDS H5DUMP-h5import-out1D)
-  ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-  
+  ADD_H5_TEST_IMPORT (tbin1 out1D tbinary.h5 0 --enable-error-stack -d integer -b)
+
   IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-    ADD_TEST (NAME H5DUMP-clear-out1 COMMAND ${CMAKE_COMMAND} -E remove ./testfiles/std/out1.h5)
-    SET_TESTS_PROPERTIES (H5DUMP-clear-out1 PROPERTIES DEPENDS H5DUMP-tbin1)
-    ADD_TEST (NAME H5DUMP-h5import-out1 COMMAND h5import out1.bin -c out3.h5import -o out1.h5)
-    SET_TESTS_PROPERTIES (H5DUMP-h5import-out1 PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
-    SET_TESTS_PROPERTIES (H5DUMP-h5import-out1 PROPERTIES DEPENDS H5DUMP-clear-out1)
-    ADD_TEST (NAME H5DUMP-h5diff-out1 COMMAND h5diff tbinary.h5 out1.h5 /integer /integer)
-    SET_TESTS_PROPERTIES (H5DUMP-h5diff-out1 PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
-    SET_TESTS_PROPERTIES (H5DUMP-h5diff-out1 PROPERTIES DEPENDS H5DUMP-h5import-out1)
+    ADD_TEST (NAME H5DUMP-tbin2-bin-clear-objects COMMAND ${CMAKE_COMMAND} -E remove out2.bin)
+    SET_TESTS_PROPERTIES (H5DUMP-tbin2-bin-clear-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
+    ADD_H5_TEST (tbin2 0 --enable-error-stack -b BE -d float -o out2.bin tbinary.h5)
+    SET_TESTS_PROPERTIES (H5DUMP-tbin2 PROPERTIES DEPENDS H5DUMP-tbin2-bin-clear-objects)
   ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
 
-  ADD_TEST (NAME H5DUMP-clear-objects-tbin2 COMMAND ${CMAKE_COMMAND} -E remove out2.bin)
-  SET_TESTS_PROPERTIES (H5DUMP-clear-objects-tbin2 PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
-  IF (HDF5_ENABLE_USING_MEMCHECKER)
-    IF (NOT "${last_test}" STREQUAL "")
-      SET_TESTS_PROPERTIES (H5DUMP-clear-objects-tbin2 PROPERTIES DEPENDS ${last_test})
-    ENDIF (NOT "${last_test}" STREQUAL "")
-  ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
-  ADD_H5_TEST (tbin2 0 --enable-error-stack -b BE -d float -o out2.bin tbinary.h5)
-  IF (HDF5_ENABLE_USING_MEMCHECKER)
-    SET_TESTS_PROPERTIES (H5DUMP-tbin2 PROPERTIES DEPENDS H5DUMP-clear-objects-tbin2)
-    SET (last_test "H5DUMP-tbin2")
-  ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
-
   # the NATIVE test can be validated with h5import/h5diff
-  ADD_TEST (NAME H5DUMP-clear-objects-tbin3 COMMAND ${CMAKE_COMMAND} -E remove out3.bin)
-  SET_TESTS_PROPERTIES (H5DUMP-clear-objects-tbin3 PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
-  IF (HDF5_ENABLE_USING_MEMCHECKER)
-    IF (NOT "${last_test}" STREQUAL "")
-      SET_TESTS_PROPERTIES (H5DUMP-clear-objects-tbin3 PROPERTIES DEPENDS ${last_test})
-    ENDIF (NOT "${last_test}" STREQUAL "")
-  ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
-  ADD_H5_TEST (tbin3 0 --enable-error-stack -d integer -o out3.bin -b NATIVE tbinary.h5)
-  IF (HDF5_ENABLE_USING_MEMCHECKER)
-    SET_TESTS_PROPERTIES (H5DUMP-tbin3 PROPERTIES DEPENDS H5DUMP-clear-objects-tbin3)
-    SET (last_test "H5DUMP-tbin3")
-  ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
-   
-  IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-    ADD_TEST (NAME H5DUMP-clear-out3D COMMAND ${CMAKE_COMMAND} -E remove ./testfiles/std/out3D.h5)
-    SET_TESTS_PROPERTIES (H5DUMP-clear-out3D PROPERTIES DEPENDS H5DUMP-tbin3)
-    ADD_TEST (NAME H5DUMP-h5import-out3D COMMAND h5import out3.bin -c tbin3.out -o out3D.h5)
-    SET_TESTS_PROPERTIES (H5DUMP-h5import-out3D PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
-    SET_TESTS_PROPERTIES (H5DUMP-h5import-out3D PROPERTIES DEPENDS H5DUMP-clear-out3D)
-    ADD_TEST (NAME H5DUMP-h5diff-out3D COMMAND h5diff tbinary.h5 out3D.h5 /integer /integer -q)
-    SET_TESTS_PROPERTIES (H5DUMP-h5diff-out3D PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
-    SET_TESTS_PROPERTIES (H5DUMP-h5diff-out3D PROPERTIES DEPENDS H5DUMP-h5import-out3D)
-  ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-  
+  ADD_H5_TEST_IMPORT (tbin3 out3D tbinary.h5 0 --enable-error-stack -d integer -b NATIVE)
+
   IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-    ADD_TEST (NAME H5DUMP-clear-out3 COMMAND ${CMAKE_COMMAND} -E remove ./testfiles/std/out3.h5)
-    SET_TESTS_PROPERTIES (H5DUMP-h5import-out3 PROPERTIES DEPENDS H5DUMP-tbin3)
-    ADD_TEST (NAME H5DUMP-h5import-out3 COMMAND h5import out3.bin -c out3.h5import -o out3.h5)
-    SET_TESTS_PROPERTIES (H5DUMP-h5import-out3 PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
-    SET_TESTS_PROPERTIES (H5DUMP-h5import-out3 PROPERTIES DEPENDS H5DUMP-clear-out3)
-    ADD_TEST (NAME H5DUMP-h5diff-out3 COMMAND h5diff tbinary.h5 out3.h5 /integer /integer -q)
-    SET_TESTS_PROPERTIES (H5DUMP-h5diff-out3 PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
-    SET_TESTS_PROPERTIES (H5DUMP-h5diff-out3 PROPERTIES DEPENDS H5DUMP-h5import-out3)
+    ADD_TEST (NAME H5DUMP-tbin4-bin-clear-objects COMMAND ${CMAKE_COMMAND} -E remove out4.bin)
+    SET_TESTS_PROPERTIES (H5DUMP-tbin4-bin-clear-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
+    ADD_H5_TEST (tbin4 0 --enable-error-stack -d double -b FILE -o out4.bin tbinary.h5)
+    SET_TESTS_PROPERTIES (H5DUMP-tbin4 PROPERTIES DEPENDS H5DUMP-tbin4-bin-clear-objects)
   ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
 
-  ADD_TEST (NAME H5DUMP-clear-objects-tbin4 COMMAND ${CMAKE_COMMAND} -E remove out4.bin)
-  SET_TESTS_PROPERTIES (H5DUMP-clear-objects-tbin4 PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
-  IF (HDF5_ENABLE_USING_MEMCHECKER)
-    IF (NOT "${last_test}" STREQUAL "")
-      SET_TESTS_PROPERTIES (H5DUMP-clear-objects-tbin4 PROPERTIES DEPENDS ${last_test})
-    ENDIF (NOT "${last_test}" STREQUAL "")
-  ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
-  ADD_H5_TEST (tbin4 0 --enable-error-stack -d double -b FILE -o out4.bin tbinary.h5)
-  IF (HDF5_ENABLE_USING_MEMCHECKER)
-    SET_TESTS_PROPERTIES (H5DUMP-tbin4 PROPERTIES DEPENDS H5DUMP-clear-objects-tbin4)
-    SET (last_test "H5DUMP-tbin4")
-  ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
-
   # test for dataset region references 
   ADD_H5_TEST (tdatareg 0 --enable-error-stack tdatareg.h5)
   ADD_H5ERR_MASK_TEST (tdataregR 0 --enable-error-stack -R tdatareg.h5)
@@ -1793,10 +1775,10 @@ IF (BUILD_TESTING)
           tpbitsUnsignedLongLong16.out.err
     )
     SET_TESTS_PROPERTIES (H5DUMP_PACKED_BITS-clearall-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/pbits")
-    IF (NOT "${last_test}" STREQUAL "")
-      SET_TESTS_PROPERTIES (H5DUMP_PACKED_BITS-clearall-objects PROPERTIES DEPENDS ${last_test})
-    ENDIF (NOT "${last_test}" STREQUAL "")
-    SET (last_test "H5DUMP_PACKED_BITS-clearall-objects")
+    IF (NOT "${last_pbits_test}" STREQUAL "")
+      SET_TESTS_PROPERTIES (H5DUMP_PACKED_BITS-clearall-objects PROPERTIES DEPENDS ${last_pbits_test})
+    ENDIF (NOT "${last_pbits_test}" STREQUAL "")
+    SET (last_pbits_test "H5DUMP_PACKED_BITS-clearall-objects")
   ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
 
   # test failure handling
@@ -2014,9 +1996,9 @@ IF (BUILD_TESTING)
           tvlstr.h5.out.err
     )
     SET_TESTS_PROPERTIES (H5DUMP-XML-clearall-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/xml")
-    IF (NOT "${last_test}" STREQUAL "")
-      SET_TESTS_PROPERTIES (H5DUMP-XML-clearall-objects PROPERTIES DEPENDS ${last_test})
-    ENDIF (NOT "${last_test}" STREQUAL "")
+    IF (NOT "${last_xml_test}" STREQUAL "")
+      SET_TESTS_PROPERTIES (H5DUMP-XML-clearall-objects PROPERTIES DEPENDS ${last_xml_test})
+    ENDIF (NOT "${last_xml_test}" STREQUAL "")
     SET (last_test "H5DUMP-XML-clearall-objects")
   ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
 
diff --git a/tools/h5dump/Makefile.in b/tools/h5dump/Makefile.in
index 6b4a6e6..4741683 100644
--- a/tools/h5dump/Makefile.in
+++ b/tools/h5dump/Makefile.in
@@ -240,6 +240,7 @@ H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
 HAVE_DMALLOC = @HAVE_DMALLOC@
 HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
 HDF5_HL = @HDF5_HL@
 HDF5_INTERFACES = @HDF5_INTERFACES@
 HDF_CXX = @HDF_CXX@
@@ -291,7 +292,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
 PATH_SEPARATOR = @PATH_SEPARATOR@
 PERL = @PERL@
-PTHREAD = @PTHREAD@
 RANLIB = @RANLIB@
 ROOT = @ROOT@
 RUNPARALLEL = @RUNPARALLEL@
diff --git a/tools/h5import/CMakeLists.txt b/tools/h5import/CMakeLists.txt
index 235cb9f..97f7be9 100644
--- a/tools/h5import/CMakeLists.txt
+++ b/tools/h5import/CMakeLists.txt
@@ -128,31 +128,29 @@ IF (BUILD_TESTING)
 ##############################################################################
 ##############################################################################
   MACRO (ADD_H5_TEST testname importfile conffile testfile)
-    ADD_TEST (
-        NAME H5IMPORT-${testname}-clear-objects
-        COMMAND    ${CMAKE_COMMAND}
-            -E remove
-            ${testfile}
-            ${testfile}.new
-            ${testfile}.new.err
-            ${testfile}.out
-            ${testfile}.out.err
-    )
-    IF (NOT "${last_test}" STREQUAL "")
-      SET_TESTS_PROPERTIES (H5IMPORT-${testname}-clear-objects PROPERTIES DEPENDS ${last_test})
-    ENDIF (NOT "${last_test}" STREQUAL "")
-    SET (last_test "H5IMPORT-${testname}-clear-objects")
-
-    ADD_TEST (NAME H5IMPORT-${testname} COMMAND $<TARGET_FILE:h5import> ${importfile} -c ${conffile} -o ${testfile})
-    IF (NOT "${last_test}" STREQUAL "")
-      SET_TESTS_PROPERTIES (H5IMPORT-${testname} PROPERTIES DEPENDS ${last_test})
-    ENDIF (NOT "${last_test}" STREQUAL "")
-    SET (last_test "H5IMPORT-${testname}")
-
-    # If using memchecker add tests without using scripts
-    IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+    # If using memchecker skip macro based tests
+    IF (HDF5_ENABLE_USING_MEMCHECKER)
+      ADD_TEST (NAME H5IMPORT-${testname} COMMAND $<TARGET_FILE:h5import> ${importfile} -c ${conffile} -o ${testfile})
+      IF (NOT "${last_test}" STREQUAL "")
+        SET_TESTS_PROPERTIES (H5IMPORT-${testname} PROPERTIES DEPENDS ${last_test})
+      ENDIF (NOT "${last_test}" STREQUAL "")
+    ELSE (HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
-          NAME H5IMPORT-H5DMP-${testname}
+          NAME H5IMPORT-${testname}-clear-objects
+          COMMAND    ${CMAKE_COMMAND}
+              -E remove
+              ${testfile}
+              ${testfile}.new
+              ${testfile}.new.err
+              ${testfile}.out
+              ${testfile}.out.err
+      )
+
+      ADD_TEST (NAME H5IMPORT-${testname} COMMAND $<TARGET_FILE:h5import> ${importfile} -c ${conffile} -o ${testfile})
+      SET_TESTS_PROPERTIES (H5IMPORT-${testname} PROPERTIES DEPENDS H5IMPORT-${testname}-clear-objects)
+
+      ADD_TEST (
+          NAME H5IMPORT-${testname}-H5DMP
           COMMAND "${CMAKE_COMMAND}"
               -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
               -D "TEST_ARGS:STRING=${testfile}"
@@ -163,9 +161,9 @@ IF (BUILD_TESTING)
               -D "TEST_SKIP_COMPARE=TRUE"
               -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
       )
-      SET_TESTS_PROPERTIES (H5IMPORT-H5DMP-${testname} PROPERTIES DEPENDS H5IMPORT-${testname})
+      SET_TESTS_PROPERTIES (H5IMPORT-${testname}-H5DMP PROPERTIES DEPENDS H5IMPORT-${testname})
       ADD_TEST (
-          NAME H5IMPORT-H5DMP_CMP-${testname}
+          NAME H5IMPORT-${testname}-H5DMP_CMP
           COMMAND "${CMAKE_COMMAND}"
               -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
               -D "TEST_ARGS:STRING=testfiles/${testfile}"
@@ -176,13 +174,12 @@ IF (BUILD_TESTING)
               -D "TEST_REFERENCE=${testfile}.new"
               -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
       )
-      SET_TESTS_PROPERTIES (H5IMPORT-H5DMP_CMP-${testname} PROPERTIES DEPENDS H5IMPORT-H5DMP-${testname})
-      SET (last_test "H5IMPORT-H5DMP_CMP-${testname}")
-    ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+      SET_TESTS_PROPERTIES (H5IMPORT-${testname}-H5DMP_CMP PROPERTIES DEPENDS H5IMPORT-${testname}-H5DMP)
+    ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
   ENDMACRO (ADD_H5_TEST testname importfile conffile testfile)
 
   MACRO (ADD_H5_DUMPTEST testname datasetname testfile)
-    # If using memchecker add tests without using scripts
+    # If using memchecker skip tests
     IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
           NAME H5IMPORT-DUMP-${testname}-clear-objects
@@ -197,13 +194,10 @@ IF (BUILD_TESTING)
               d${testfile}.dff
               d${testfile}.dff.err
       )
-      IF (NOT "${last_test}" STREQUAL "")
-        SET_TESTS_PROPERTIES (H5IMPORT-DUMP-${testname}-clear-objects PROPERTIES DEPENDS ${last_test})
-      ENDIF (NOT "${last_test}" STREQUAL "")
 
       IF ("${ARGN}" STREQUAL "BINARY")
         ADD_TEST (
-            NAME H5IMPORT-DUMP-${testname}-H5DUMP
+            NAME H5IMPORT-DUMP-${testname}-H5DMP
             COMMAND "${CMAKE_COMMAND}"
                 -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
                 -D "TEST_ARGS:STRING=-p;-d;${datasetname};-o;d${testfile}.bin;-b;testfiles/${testfile}"
@@ -215,7 +209,7 @@ IF (BUILD_TESTING)
         )
       ELSE ("${ARGN}" STREQUAL "BINARY")
         ADD_TEST (
-            NAME H5IMPORT-DUMP-${testname}-H5DUMP
+            NAME H5IMPORT-DUMP-${testname}-H5DMP
             COMMAND "${CMAKE_COMMAND}"
                 -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
                 -D "TEST_ARGS:STRING=-p;-d;${datasetname};-o;d${testfile}.bin;-y;--width=1;testfiles/${testfile}"
@@ -226,7 +220,7 @@ IF (BUILD_TESTING)
                 -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
         )
       ENDIF ("${ARGN}" STREQUAL "BINARY")
-      SET_TESTS_PROPERTIES (H5IMPORT-DUMP-${testname}-H5DUMP PROPERTIES DEPENDS "H5IMPORT-DUMP-${testname}-clear-objects")
+      SET_TESTS_PROPERTIES (H5IMPORT-DUMP-${testname}-H5DMP PROPERTIES DEPENDS "H5IMPORT-DUMP-${testname}-clear-objects")
       
       ADD_TEST (
           NAME H5IMPORT-DUMP-${testname}
@@ -239,10 +233,10 @@ IF (BUILD_TESTING)
               -D "TEST_SKIP_COMPARE=TRUE"
               -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
       )
-      SET_TESTS_PROPERTIES (H5IMPORT-DUMP-${testname} PROPERTIES DEPENDS "H5IMPORT-DUMP-${testname}-H5DUMP")
+      SET_TESTS_PROPERTIES (H5IMPORT-DUMP-${testname} PROPERTIES DEPENDS "H5IMPORT-DUMP-${testname}-H5DMP")
 
       ADD_TEST (
-          NAME H5IMPORT-DUMP-${testname}-H5DIFF
+          NAME H5IMPORT-DUMP-${testname}-H5DFF
           COMMAND "${CMAKE_COMMAND}"
               -D "TEST_PROGRAM=$<TARGET_FILE:h5diff>"
               -D "TEST_ARGS:STRING=-v;d${testfile};testfiles/${testfile};${datasetname};${datasetname}"
@@ -253,21 +247,17 @@ IF (BUILD_TESTING)
               -D "TEST_REFERENCE=testfiles/d${testfile}.txt"
               -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
       )
-      SET_TESTS_PROPERTIES (H5IMPORT-DUMP-${testname}-H5DIFF PROPERTIES DEPENDS "H5IMPORT-DUMP-${testname}")
-      SET (last_test "H5IMPORT-DUMP-${testname}-H5DIFF")
-    ELSE (NOT HDF5_ENABLE_USING_MEMCHECKER)
-      ADD_TEST (
-          NAME H5IMPORT-DUMP-${testname}-SKIPPED
-          COMMAND ${CMAKE_COMMAND} -E echo "SKIP ${testname} ${datasetname} ${testfile}"
-      )
+      SET_TESTS_PROPERTIES (H5IMPORT-DUMP-${testname}-H5DFF PROPERTIES DEPENDS "H5IMPORT-DUMP-${testname}")
     ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
   ENDMACRO (ADD_H5_DUMPTEST testname datasetname testfile)
 
   MACRO (ADD_H5_SKIP_DUMPTEST testname datasetname testfile)
-    ADD_TEST (
-        NAME H5IMPORT-DUMP-${testname}-SKIPPED
-        COMMAND ${CMAKE_COMMAND} -E echo "SKIP ${testname} ${datasetname} ${testfile} --- DEFLATE filter not available"
-    )
+    IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+      ADD_TEST (
+          NAME H5IMPORT-DUMP-${testname}-SKIPPED
+          COMMAND ${CMAKE_COMMAND} -E echo "SKIP ${testname} ${datasetname} ${testfile} --- DEFLATE filter not available"
+      )
+    ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
   ENDMACRO (ADD_H5_SKIP_DUMPTEST testname datasetname testfile)
 
   # --------------------------------------------------------------------
@@ -283,27 +273,171 @@ IF (BUILD_TESTING)
 ##############################################################################
 ##############################################################################
 
-  # Remove any output file left over from previous test run
-  ADD_TEST (
-      NAME H5IMPORT-clear-objects
-      COMMAND    ${CMAKE_COMMAND}
-          -E remove 
-          binfp64.bin
-          binin8.bin
-          binin8w.bin
-          binin16.bin
-          binin32.bin
-          binuin16.bin
-          binuin32.bin
-          ${HDF5_REFERENCE_TEST_FILES}
-  )
-  SET (last_test "H5IMPORT-clear-objects")
+  IF (HDF5_ENABLE_USING_MEMCHECKER)
+    # Remove any output file left over from previous test run
+    ADD_TEST (
+        NAME H5IMPORT-clear-objects
+        COMMAND    ${CMAKE_COMMAND}
+            -E remove 
+            binfp64.bin
+            binin8.bin
+            binin8w.bin
+            binin16.bin
+            binin32.bin
+            binuin16.bin
+            binuin32.bin
+            txtin32.h5
+            txtin32.h5.new
+            txtin32.h5.new.err
+            txtin32.h5.out
+            txtin32.h5.out.err
+            txtin16.h5
+            txtin16.h5.new
+            txtin16.h5.new.err
+            txtin16.h5.out
+            txtin16.h5.out.err
+            txtin8.h5
+            txtin8.h5.new
+            txtin8.h5.new.err
+            txtin8.h5.out
+            txtin8.h5.out.err
+            txtuin16.h5
+            txtuin16.h5.new
+            txtuin16.h5.new.err
+            txtuin16.h5.out
+            txtuin16.h5.out.err
+            txtuin32.h5
+            txtuin32.h5.new
+            txtuin32.h5.new.err
+            txtuin32.h5.out
+            txtuin32.h5.out.err
+            txtfp32.h5
+            txtfp32.h5.new
+            txtfp32.h5.new.err
+            txtfp32.h5.out
+            txtfp32.h5.out.err
+            txtfp64.h5
+            txtfp64.h5.new
+            txtfp64.h5.new.err
+            txtfp64.h5.out
+            txtfp64.h5.out.err
+            binfp64.h5
+            binfp64.h5.new
+            binfp64.h5.new.err
+            binfp64.h5.out
+            binfp64.h5.out.err
+            binin8.h5
+            binin8.h5.new
+            binin8.h5.new.err
+            binin8.h5.out
+            binin8.h5.out.err
+            binin8w.h5
+            binin8w.h5.new
+            binin8w.h5.new.err
+            binin8w.h5.out
+            binin8w.h5.out.err
+            binin16.h5
+            binin16.h5.new
+            binin16.h5.new.err
+            binin16.h5.out
+            binin16.h5.out.err
+            binin32.h5
+            binin32.h5.new
+            binin32.h5.new.err
+            binin32.h5.out
+            binin32.h5.out.err
+            binuin16.h5
+            binuin16.h5.new
+            binuin16.h5.new.err
+            binuin16.h5.out
+            binuin16.h5.out.err
+            binuin32.h5
+            binuin32.h5.new
+            binuin32.h5.new.err
+            binuin32.h5.out
+            binuin32.h5.out.err
+            txtstr.h5
+            txtstr.h5.new
+            txtstr.h5.new.err
+            txtstr.h5.out
+            txtstr.h5.out.err
+            textpfe.h5
+            textpfe.h5.new
+            textpfe.h5.new.err
+            textpfe.h5.out
+            textpfe.h5.out.err
+            dbinfp64.h5
+            dbinfp64.h5.bin
+            dbinfp64.h5.imp
+            dbinfp64.h5.imp.err
+            dbinfp64.h5.dmp
+            dbinfp64.h5.dmp.err
+            dbinfp64.h5.dff
+            dbinfp64.h5.dff.err
+            dbinin8.h5
+            dbinin8.h5.bin
+            dbinin8.h5.imp
+            dbinin8.h5.imp.err
+            dbinin8.h5.dmp
+            dbinin8.h5.dmp.err
+            dbinin8.h5.dff
+            dbinin8.h5.dff.err
+            dbinin8w.h5
+            dbinin8w.h5.bin
+            dbinin8w.h5.imp
+            dbinin8w.h5.imp.err
+            dbinin8w.h5.dmp
+            dbinin8w.h5.dmp.err
+            dbinin8w.h5.dff
+            dbinin8w.h5.dff.err
+            dbinin16.h5
+            dbinin16.h5.bin
+            dbinin16.h5.imp
+            dbinin16.h5.imp.err
+            dbinin16.h5.dmp
+            dbinin16.h5.dmp.err
+            dbinin16.h5.dff
+            dbinin16.h5.dff.err
+            dbinin32.h5
+            dbinin32.h5.bin
+            dbinin32.h5.imp
+            dbinin32.h5.imp.err
+            dbinin32.h5.dmp
+            dbinin32.h5.dmp.err
+            dbinin32.h5.dff
+            dbinin32.h5.dff.err
+            dbinuin16.h5
+            dbinuin16.h5.bin
+            dbinuin16.h5.imp
+            dbinuin16.h5.imp.err
+            dbinuin16.h5.dmp
+            dbinuin16.h5.dmp.err
+            dbinuin16.h5.dff
+            dbinuin16.h5.dff.err
+            dbinuin32.h5
+            dbinuin32.h5.bin
+            dbinuin32.h5.imp
+            dbinuin32.h5.imp.err
+            dbinuin32.h5.dmp
+            dbinuin32.h5.dmp.err
+            dbinuin32.h5.dff
+            dbinuin32.h5.dff.err
+            dtxtstr.h5
+            dtxtstr.h5.bin
+            dtxtstr.h5.imp
+            dtxtstr.h5.imp.err
+            dtxtstr.h5.dmp
+            dtxtstr.h5.dmp.err
+            dtxtstr.h5.dff
+            dtxtstr.h5.dff.err
+    )
+    SET (last_test "H5IMPORT-clear-objects")
+  ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
 
   ADD_TEST (NAME H5IMPORT-h5importtest COMMAND $<TARGET_FILE:h5importtest>)
   IF (NOT "${last_test}" STREQUAL "")
     SET_TESTS_PROPERTIES (H5IMPORT-h5importtest PROPERTIES DEPENDS ${last_test})
   ENDIF (NOT "${last_test}" STREQUAL "")
-  SET (last_test "H5IMPORT-h5importtest")
 
   # ----- TESTING "ASCII I32 rank 3 - Output BE " ;
   ADD_H5_TEST (ASCII_I32 testfiles/txtin32.txt testfiles/txtin32.conf txtin32.h5)
diff --git a/tools/h5import/Makefile.in b/tools/h5import/Makefile.in
index 16e8901..9ad2341 100644
--- a/tools/h5import/Makefile.in
+++ b/tools/h5import/Makefile.in
@@ -234,6 +234,7 @@ H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
 HAVE_DMALLOC = @HAVE_DMALLOC@
 HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
 HDF5_HL = @HDF5_HL@
 HDF5_INTERFACES = @HDF5_INTERFACES@
 HDF_CXX = @HDF_CXX@
@@ -285,7 +286,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
 PATH_SEPARATOR = @PATH_SEPARATOR@
 PERL = @PERL@
-PTHREAD = @PTHREAD@
 RANLIB = @RANLIB@
 ROOT = @ROOT@
 RUNPARALLEL = @RUNPARALLEL@
diff --git a/tools/h5jam/CMakeLists.txt b/tools/h5jam/CMakeLists.txt
index 437fed3..95777b3 100644
--- a/tools/h5jam/CMakeLists.txt
+++ b/tools/h5jam/CMakeLists.txt
@@ -112,6 +112,13 @@ IF (BUILD_TESTING)
       ENDIF (NOT "${resultcode}" STREQUAL "0")
     ELSE (HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
+          NAME H5JAM-${expectfile}-clear-objects
+          COMMAND    ${CMAKE_COMMAND}
+              -E remove
+              ${expectfile}.out
+              ${expectfile}.out.err
+      )
+      ADD_TEST (
           NAME H5JAM-${expectfile}
           COMMAND "${CMAKE_COMMAND}"
               -D "TEST_PROGRAM=$<TARGET_FILE:h5jam>"
@@ -122,6 +129,7 @@ IF (BUILD_TESTING)
               -D "TEST_REFERENCE=testfiles/${expectfile}.txt"
               -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
       )
+      SET_TESTS_PROPERTIES (H5JAM-${expectfile} PROPERTIES DEPENDS H5JAM-${expectfile}-clear-objects)
     ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
   ENDMACRO (TEST_H5JAM_OUTPUT)
 
@@ -138,6 +146,13 @@ IF (BUILD_TESTING)
       ENDIF (NOT "${resultcode}" STREQUAL "0")
     ELSE (HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
+          NAME H5JAM-UNJAM-${expectfile}-clear-objects
+          COMMAND    ${CMAKE_COMMAND}
+              -E remove
+              ${expectfile}.out
+              ${expectfile}.out.err
+      )
+      ADD_TEST (
           NAME H5JAM-UNJAM-${expectfile}
           COMMAND "${CMAKE_COMMAND}"
               -D "TEST_PROGRAM=$<TARGET_FILE:h5unjam>"
@@ -148,50 +163,38 @@ IF (BUILD_TESTING)
               -D "TEST_REFERENCE=testfiles/${expectfile}.txt"
               -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
       )
+      SET_TESTS_PROPERTIES (H5JAM-UNJAM-${expectfile} PROPERTIES DEPENDS H5JAM-UNJAM-${expectfile}-clear-objects)
     ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
   ENDMACRO (TEST_H5UNJAM_OUTPUT)
 
-  MACRO (CLEANUP testname)
-    ADD_TEST (
-        NAME H5JAM-CLEANUP-${testname}-clear-objects
-        COMMAND ${CMAKE_COMMAND} -E remove ${ARGN}
-    )
-    IF (NOT "${last_test}" STREQUAL "")
-      SET_TESTS_PROPERTIES (H5JAM-CLEANUP-${testname}-clear-objects PROPERTIES DEPENDS ${last_test})
-    ENDIF (NOT "${last_test}" STREQUAL "")
-    SET (last_test "H5JAM-CLEANUP-${testname}-clear-objects")
-  ENDMACRO(CLEANUP testname testfile)
-
-  MACRO (CHECKFILE testname expected actual)
+  MACRO (CHECKFILE testname testdepends expected actual)
     # If using memchecker add tests without using scripts
     IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
-          NAME H5JAM-CHECKFILE-${testname}-clear-objects
+          NAME H5JAM-${testname}-CHECKFILE-clear-objects
           COMMAND    ${CMAKE_COMMAND}
               -E remove
-              ${expected}.new
-              ${expected}.new.err
+              ${actual}.new
+              ${actual}.new.err
               ${actual}.out
               ${actual}.out.err
       )
-      IF (NOT "${last_test}" STREQUAL "")
-        SET_TESTS_PROPERTIES (H5JAM-CHECKFILE-${testname}-clear-objects PROPERTIES DEPENDS ${last_test})
-      ENDIF (NOT "${last_test}" STREQUAL "")
+      SET_TESTS_PROPERTIES (H5JAM-${testname}-CHECKFILE-clear-objects PROPERTIES DEPENDS ${testdepends})
       ADD_TEST (
-          NAME H5JAM-CHECKFILE-H5DMP-${testname}
+          NAME H5JAM-${testname}-CHECKFILE-H5DMP
           COMMAND "${CMAKE_COMMAND}"
               -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
               -D "TEST_ARGS:STRING=testfiles/${expected}"
               -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-              -D "TEST_OUTPUT=${expected}.new"
+              -D "TEST_OUTPUT=${actual}.new"
               -D "TEST_EXPECT=0"
               -D "TEST_FILTER=(^(HDF5)[^\n]*)"
               -D "TEST_SKIP_COMPARE=TRUE"
               -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
       )
-      SET_TESTS_PROPERTIES (H5JAM-CHECKFILE-H5DMP-${testname} PROPERTIES DEPENDS H5JAM-CHECKFILE-${testname}-clear-objects)
+      SET_TESTS_PROPERTIES (H5JAM-${testname}-CHECKFILE-H5DMP PROPERTIES DEPENDS H5JAM-${testname}-CHECKFILE-clear-objects)
       ADD_TEST (
-          NAME H5JAM-CHECKFILE-H5DMP_CMP-${testname}
+          NAME H5JAM-${testname}-CHECKFILE-H5DMP_CMP
           COMMAND "${CMAKE_COMMAND}"
               -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
               -D "TEST_ARGS:STRING=${actual}"
@@ -199,168 +202,210 @@ IF (BUILD_TESTING)
               -D "TEST_OUTPUT=${actual}.out"
               -D "TEST_EXPECT=0"
               -D "TEST_FILTER=(^(HDF5)[^\n]*)"
-              -D "TEST_REFERENCE=${expected}.new"
+              -D "TEST_REFERENCE=${actual}.new"
               -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
       )
-      SET_TESTS_PROPERTIES (H5JAM-CHECKFILE-H5DMP_CMP-${testname} PROPERTIES DEPENDS H5JAM-CHECKFILE-H5DMP-${testname})
-      SET (last_test "H5JAM-CHECKFILE-H5DMP_CMP-${testname}")
+      SET_TESTS_PROPERTIES (H5JAM-${testname}-CHECKFILE-H5DMP_CMP PROPERTIES DEPENDS H5JAM-${testname}-CHECKFILE-H5DMP)
     ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-  ENDMACRO(CHECKFILE testname expected actual)
-
-  MACRO (SETUP testname infile outfile)
-    ADD_TEST (
-        NAME H5JAM-SETUP-${testname}-clear-objects
-        COMMAND ${CMAKE_COMMAND} -E remove ${outfile}
-    )
-    IF (NOT "${last_test}" STREQUAL "")
-      SET_TESTS_PROPERTIES (H5JAM-SETUP-${testname}-clear-objects PROPERTIES DEPENDS ${last_test})
-    ENDIF (NOT "${last_test}" STREQUAL "")
-    ADD_TEST (
-        NAME H5JAM-SETUP-${testname}
-        COMMAND ${CMAKE_COMMAND} -E copy_if_different ${HDF5_TOOLS_H5JAM_SOURCE_DIR}/testfiles/${infile} ${PROJECT_BINARY_DIR}/${outfile}
-    )
-    SET_TESTS_PROPERTIES (H5JAM-SETUP-${testname} PROPERTIES DEPENDS H5JAM-SETUP-${testname}-clear-objects)
-    SET (last_test "H5JAM-SETUP-${testname}")
-  ENDMACRO(SETUP testname infile outfile)
+  ENDMACRO(CHECKFILE testname testdepends expected actual)
 
-  MACRO (CHECK_UB_1 testname testfile ufile)
+  MACRO (UNJAMTEST testname setfile infile ufile chkfile outfile)
     IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
-          NAME H5JAM-CHECK_UB_1-${testname}-clear-objects
-          COMMAND    ${CMAKE_COMMAND}
-              -E remove
-              ${testfile}.len.txt
-              ${testfile}.cmp
-              ${ufile}.cmp
+          NAME H5JAM-${testname}-UNJAM-SETUP-clear-objects
+          COMMAND ${CMAKE_COMMAND} -E remove ${infile}
+      )
+      ADD_TEST (
+          NAME H5JAM-${testname}-UNJAM-SETUP
+          COMMAND ${CMAKE_COMMAND} -E copy_if_different ${HDF5_TOOLS_H5JAM_SOURCE_DIR}/testfiles/${setfile} ${PROJECT_BINARY_DIR}/${infile}
+      )
+      SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM-SETUP PROPERTIES DEPENDS H5JAM-${testname}-UNJAM-SETUP-clear-objects)
+      ADD_TEST (
+          NAME H5JAM-${testname}-UNJAM-clear-objects
+          COMMAND ${CMAKE_COMMAND} -E remove ${outfile}
       )
-      IF (NOT "${last_test}" STREQUAL "")
-        SET_TESTS_PROPERTIES (H5JAM-CHECK_UB_1-${testname}-clear-objects PROPERTIES DEPENDS ${last_test})
-      ENDIF (NOT "${last_test}" STREQUAL "")
+      SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM-clear-objects PROPERTIES DEPENDS H5JAM-${testname}-UNJAM-SETUP)
+      IF (NOT "${ufile}" STREQUAL "NONE")
+        ADD_TEST (
+            NAME H5JAM-${testname}-UNJAM_D-clear-objects
+            COMMAND ${CMAKE_COMMAND} -E remove ${ufile}
+        )
+        SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM_D-clear-objects PROPERTIES DEPENDS H5JAM-${testname}-UNJAM-clear-objects)
+        ADD_TEST (NAME H5JAM-${testname}-UNJAM COMMAND $<TARGET_FILE:h5unjam> -i ${infile} -u ${ufile} -o ${outfile})
+        SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM PROPERTIES DEPENDS H5JAM-${testname}-UNJAM_D-clear-objects)
+        SET (compare_test ${ufile})
+      ELSE (NOT "${ufile}" STREQUAL "NONE")
+        IF (NOT "${ARGN}" STREQUAL "--delete")
+          ADD_TEST (
+              NAME H5JAM-${testname}-UNJAM_D-clear-objects
+              COMMAND ${CMAKE_COMMAND} -E remove ${outfile}.ufile.txt ${outfile}.ufile.txt.err
+          )
+          SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM_D-clear-objects PROPERTIES DEPENDS H5JAM-${testname}-UNJAM-clear-objects)
+          ADD_TEST (
+              NAME H5JAM-${testname}-UNJAM
+              COMMAND "${CMAKE_COMMAND}"
+                  -D "TEST_PROGRAM=$<TARGET_FILE:h5unjam>"
+                  -D "TEST_ARGS:STRING=-i;${infile};-o;${outfile}"
+                  -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
+                  -D "TEST_OUTPUT=${outfile}.ufile.txt"
+                  -D "TEST_EXPECT=0"
+                  -D "TEST_SKIP_COMPARE=TRUE"
+                  -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
+          )
+          SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM PROPERTIES DEPENDS H5JAM-${testname}-UNJAM_D-clear-objects)
+          SET (compare_test "${outfile}.ufile.txt")
+        ELSE (NOT "${ARGN}" STREQUAL "--delete")
+          ADD_TEST (NAME H5JAM-${testname}-UNJAM COMMAND $<TARGET_FILE:h5unjam> -i ${infile} -o ${outfile})
+          SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM PROPERTIES DEPENDS H5JAM-${testname}-UNJAM-clear-objects)
+          SET (compare_test "")
+        ENDIF (NOT "${ARGN}" STREQUAL "--delete")
+      ENDIF (NOT "${ufile}" STREQUAL "NONE")
+      IF (NOT "${compare_test}" STREQUAL "")
+        ADD_TEST (
+            NAME H5JAM-${testname}-UNJAM-CHECK_UB_1-clear-objects
+            COMMAND    ${CMAKE_COMMAND}
+                -E remove
+                ${infile}.len.txt
+                ${infile}.cmp
+                ${infile}-ub.cmp
+        )
+        SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM-CHECK_UB_1-clear-objects PROPERTIES DEPENDS "H5JAM-${testname}-UNJAM")
+        ADD_TEST (
+            NAME H5JAM-${testname}-UNJAM-CHECK_UB_1
+            COMMAND "${CMAKE_COMMAND}"
+                -D "TEST_PROGRAM=$<TARGET_FILE:tellub>"
+                -D "TEST_GET_PROGRAM=$<TARGET_FILE:getub>"
+                -D "TEST_CHECKUB=YES"
+                -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
+                -D "TEST_HFILE=${infile}"
+                -D "TEST_UFILE=${compare_test}"
+                -D "TEST_EXPECT=0"
+                -D "TEST_OFILE="
+                -P "${HDF5_RESOURCES_DIR}/userblockTest.cmake"
+        )
+        SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM-CHECK_UB_1 PROPERTIES DEPENDS H5JAM-${testname}-UNJAM-CHECK_UB_1-clear-objects)
+      ENDIF (NOT "${compare_test}" STREQUAL "")
+
       ADD_TEST (
-          NAME H5JAM-CHECK_UB_1-${testname}
+          NAME H5JAM-${testname}-UNJAM-CHECK_NOUB
           COMMAND "${CMAKE_COMMAND}"
               -D "TEST_PROGRAM=$<TARGET_FILE:tellub>"
               -D "TEST_GET_PROGRAM=$<TARGET_FILE:getub>"
-              -D "TEST_CHECKUB=YES"
+              -D "TEST_CHECKUB=NO"
               -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-              -D "TEST_HFILE=${testfile}"
-              -D "TEST_UFILE=${ufile}"
+              -D "TEST_HFILE=${outfile}"
               -D "TEST_EXPECT=0"
-              -D "TEST_OFILE=${ARGN}"
+              -D "TEST_UFILE=NULL"
+              -D "TEST_OFILE=NULL"
               -P "${HDF5_RESOURCES_DIR}/userblockTest.cmake"
       )
-      SET_TESTS_PROPERTIES (H5JAM-CHECK_UB_1-${testname} PROPERTIES DEPENDS H5JAM-CHECK_UB_1-${testname}-clear-objects)
-      SET (last_test "H5JAM-CHECK_UB_1-${testname}")
+      IF (NOT "${compare_test}" STREQUAL "")
+        SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM-CHECK_NOUB PROPERTIES DEPENDS H5JAM-${testname}-UNJAM-CHECK_UB_1)
+      ELSE (NOT "${compare_test}" STREQUAL "")
+        SET_TESTS_PROPERTIES (H5JAM-${testname}-UNJAM-CHECK_NOUB PROPERTIES DEPENDS H5JAM-${testname}-UNJAM)
+      ENDIF (NOT "${compare_test}" STREQUAL "")
+
+      CHECKFILE (${testname} "H5JAM-${testname}-UNJAM-CHECK_NOUB" ${chkfile} ${outfile})
     ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-  ENDMACRO(CHECK_UB_1 testname testfile ufile)
+  ENDMACRO(UNJAMTEST testname infile ufile outfile)
 
-  MACRO (CHECK_NOUB testname testfile)
+  MACRO (JAMTEST testname jamfile infile chkfile outfile)
     IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
-          NAME H5JAM-CHECK_NOUB-${testname}
+          NAME H5JAM-${testname}-clear-objects
+          COMMAND ${CMAKE_COMMAND} -E remove ${outfile} ${infile}.cpy.h5
+      )
+    ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+    ADD_TEST (NAME H5JAM-${testname} COMMAND $<TARGET_FILE:h5jam> -u testfiles/${jamfile} -i testfiles/${infile} -o ${outfile} ${ARGN})
+    IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+      SET_TESTS_PROPERTIES (H5JAM-${testname} PROPERTIES DEPENDS H5JAM-${testname}-clear-objects)
+      SET (compare_test ${outfile})
+      SET (compare_orig testfiles/${infile})
+      IF ("${ARGN}" STREQUAL "--clobber")
+        SET (compare_orig "")
+      ENDIF ("${ARGN}" STREQUAL "--clobber")
+
+      ADD_TEST (
+          NAME H5JAM-${testname}-CHECK_UB_1-clear-objects
+          COMMAND    ${CMAKE_COMMAND}
+              -E remove
+              ${compare_test}.len.txt
+              ${compare_test}.cmp
+              ${compare_test}-ub.cmp
+      )
+      SET_TESTS_PROPERTIES (H5JAM-${testname}-CHECK_UB_1-clear-objects PROPERTIES DEPENDS "H5JAM-${testname}")
+      ADD_TEST (
+          NAME H5JAM-${testname}-CHECK_UB_1
           COMMAND "${CMAKE_COMMAND}"
               -D "TEST_PROGRAM=$<TARGET_FILE:tellub>"
               -D "TEST_GET_PROGRAM=$<TARGET_FILE:getub>"
-              -D "TEST_CHECKUB=NO"
+              -D "TEST_CHECKUB=YES"
               -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-              -D "TEST_HFILE=${testfile}"
+              -D "TEST_HFILE=${compare_test}"
+              -D "TEST_UFILE=testfiles/${jamfile}"
               -D "TEST_EXPECT=0"
-              -D "TEST_UFILE=NULL"
-              -D "TEST_OFILE=NULL"
+              -D "TEST_OFILE=${compare_orig}"
               -P "${HDF5_RESOURCES_DIR}/userblockTest.cmake"
       )
-      IF (NOT "${last_test}" STREQUAL "")
-        SET_TESTS_PROPERTIES (H5JAM-CHECK_NOUB-${testname} PROPERTIES DEPENDS ${last_test})
-      ENDIF (NOT "${last_test}" STREQUAL "")
-      SET (last_test "H5JAM-CHECK_NOUB-${testname}")
+      SET_TESTS_PROPERTIES (H5JAM-${testname}-CHECK_UB_1 PROPERTIES DEPENDS H5JAM-${testname}-CHECK_UB_1-clear-objects)
+      CHECKFILE (${testname} "H5JAM-${testname}-CHECK_UB_1" ${chkfile} ${outfile})
     ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-  ENDMACRO(CHECK_NOUB testname testfile)
+  ENDMACRO (JAMTEST testname jamfile infile outfile)
 
-  MACRO (UNJAMTEST testname infile ufile outfile)
-    ADD_TEST (
-        NAME H5JAM-UNJAM-${testname}-clear-objects
-        COMMAND ${CMAKE_COMMAND} -E remove ${outfile}
-    )
-    IF (NOT "${last_test}" STREQUAL "")
-      SET_TESTS_PROPERTIES (H5JAM-UNJAM-${testname}-clear-objects PROPERTIES DEPENDS ${last_test})
-    ENDIF (NOT "${last_test}" STREQUAL "")
-    IF (NOT "${ufile}" STREQUAL "NONE")
+  MACRO (JAMTEST_NONE testname jamfile infile setfile chkfile)
+    IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
-          NAME H5JAM-UNJAM_D-${testname}-clear-objects
-          COMMAND ${CMAKE_COMMAND} -E remove ${ufile}
+          NAME H5JAM-${testname}_NONE-clear-objects
+          COMMAND ${CMAKE_COMMAND} -E remove 
+              ${chkfile} ${chkfile}.cpy.h5
       )
-      SET_TESTS_PROPERTIES (H5JAM-UNJAM_D-${testname}-clear-objects PROPERTIES DEPENDS H5JAM-UNJAM-${testname}-clear-objects)
-      ADD_TEST (NAME H5JAM-UNJAM-${testname} COMMAND $<TARGET_FILE:h5unjam> -i ${infile} -u ${ufile} -o ${outfile})
-      SET_TESTS_PROPERTIES (H5JAM-UNJAM-${testname} PROPERTIES DEPENDS H5JAM-UNJAM_D-${testname}-clear-objects)
-      SET (compare_test ${ufile})
-    ELSE (NOT "${ufile}" STREQUAL "NONE")
-      IF (NOT "${ARGN}" STREQUAL "--delete")
-        ADD_TEST (
-            NAME H5JAM-UNJAM_D-${testname}-clear-objects
-            COMMAND ${CMAKE_COMMAND} -E remove ${outfile}.ufile.txt ${outfile}.ufile.txt.err
-        )
-        SET_TESTS_PROPERTIES (H5JAM-UNJAM_D-${testname}-clear-objects PROPERTIES DEPENDS H5JAM-UNJAM-${testname}-clear-objects)
-        IF (HDF5_ENABLE_USING_MEMCHECKER)
-          ADD_TEST (NAME H5JAM-UNJAM-${testname} COMMAND $<TARGET_FILE:h5unjam> -i ${infile} -o ${outfile})
-        ELSE (HDF5_ENABLE_USING_MEMCHECKER)
-          ADD_TEST (
-              NAME H5JAM-UNJAM-${testname}
-              COMMAND "${CMAKE_COMMAND}"
-                  -D "TEST_PROGRAM=$<TARGET_FILE:h5unjam>"
-                  -D "TEST_ARGS:STRING=-i;${infile};-o;${outfile}"
-                  -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-                  -D "TEST_OUTPUT=${outfile}.ufile.txt"
-                  -D "TEST_EXPECT=0"
-                  -D "TEST_SKIP_COMPARE=TRUE"
-                  -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
-          )
-        ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
-        SET_TESTS_PROPERTIES (H5JAM-UNJAM-${testname} PROPERTIES DEPENDS H5JAM-UNJAM_D-${testname}-clear-objects)
-        SET (compare_test "${outfile}.ufile.txt")
-      ELSE (NOT "${ARGN}" STREQUAL "--delete")
-        ADD_TEST (NAME H5JAM-UNJAM-${testname} COMMAND $<TARGET_FILE:h5unjam> -i ${infile} -o ${outfile})
-        SET_TESTS_PROPERTIES (H5JAM-UNJAM-${testname} PROPERTIES DEPENDS H5JAM-UNJAM-${testname}-clear-objects)
-        SET (compare_test "")
-      ENDIF (NOT "${ARGN}" STREQUAL "--delete")
-    ENDIF (NOT "${ufile}" STREQUAL "NONE")
-    SET (last_test "H5JAM-UNJAM-${testname}")
-    IF (NOT "${compare_test}" STREQUAL "")
-      CHECK_UB_1 (${testname} ${infile} ${compare_test})
-    ENDIF (NOT "${compare_test}" STREQUAL "")
-    CHECK_NOUB (${testname} ${outfile})
-  ENDMACRO(UNJAMTEST testname infile ufile outfile)
+      ADD_TEST (
+          NAME H5JAM-${testname}_NONE-SETUP
+          COMMAND ${CMAKE_COMMAND} -E copy_if_different testfiles/${setfile} ${chkfile}
+      )
+      SET_TESTS_PROPERTIES (H5JAM-${testname}_NONE-SETUP PROPERTIES DEPENDS H5JAM-${testname}_NONE-clear-objects)
 
-  MACRO (JAMTEST testname jamfile infile outfile)
-    ADD_TEST (
-        NAME H5JAM-${testname}-clear-objects
-        COMMAND ${CMAKE_COMMAND} -E remove ${outfile} ${infile}.cpy.h5
-    )
-    IF (NOT "${last_test}" STREQUAL "")
-      SET_TESTS_PROPERTIES (H5JAM-${testname}-clear-objects PROPERTIES DEPENDS ${last_test})
-    ENDIF (NOT "${last_test}" STREQUAL "")
-    SET (last_test "H5JAM-${testname}-clear-objects")
-    IF ("${outfile}" STREQUAL "NONE")
       ADD_TEST (
-          NAME H5JAM-NONE_COPY-${testname}
-          COMMAND ${CMAKE_COMMAND} -E copy_if_different ${infile} ${infile}.cpy.h5
+          NAME H5JAM-${testname}_NONE_COPY
+          COMMAND ${CMAKE_COMMAND} -E copy_if_different ${chkfile} ${chkfile}.cpy.h5
       )
-      SET_TESTS_PROPERTIES (H5JAM-NONE_COPY-${testname} PROPERTIES DEPENDS ${last_test})
-      SET (last_test "H5JAM-NONE_COPY-${testname}")
-      ADD_TEST (NAME H5JAM-${testname} COMMAND $<TARGET_FILE:h5jam> -u testfiles/${jamfile} -i ${infile} ${ARGN})
-      SET (compare_test ${infile})
-      SET (compare_orig ${infile}.cpy.h5)
-    ELSE ("${outfile}" STREQUAL "NONE")
-      ADD_TEST (NAME H5JAM-${testname} COMMAND $<TARGET_FILE:h5jam> -u testfiles/${jamfile} -i testfiles/${infile} -o ${outfile} ${ARGN})
-      SET (compare_test ${outfile})
-      SET (compare_orig testfiles/${infile})
-    ENDIF ("${outfile}" STREQUAL "NONE")
-    SET_TESTS_PROPERTIES (H5JAM-${testname} PROPERTIES DEPENDS ${last_test})
-    SET (last_test "H5JAM-${testname}")
-    IF ("${ARGN}" STREQUAL "--clobber")
-      SET (compare_orig "")
-    ENDIF ("${ARGN}" STREQUAL "--clobber")
-    CHECK_UB_1 (${testname} ${compare_test} testfiles/${jamfile} ${compare_orig})
-  ENDMACRO (JAMTEST testname jamfile infile outfile)
+      SET_TESTS_PROPERTIES (H5JAM-${testname}_NONE_COPY PROPERTIES DEPENDS H5JAM-${testname}_NONE-SETUP)
+
+      ADD_TEST (NAME H5JAM-${testname}_NONE COMMAND $<TARGET_FILE:h5jam> -u testfiles/${jamfile} -i ${chkfile} ${ARGN})
+      SET_TESTS_PROPERTIES (H5JAM-${testname}_NONE PROPERTIES DEPENDS H5JAM-${testname}_NONE_COPY)
+
+      SET (compare_test ${chkfile})
+      SET (compare_orig ${chkfile}.cpy.h5)
+      IF ("${ARGN}" STREQUAL "--clobber")
+        SET (compare_orig "")
+      ENDIF ("${ARGN}" STREQUAL "--clobber")
+
+      ADD_TEST (
+          NAME H5JAM-${testname}_NONE-CHECK_UB_1-clear-objects
+          COMMAND    ${CMAKE_COMMAND}
+              -E remove
+              ${compare_test}.len.txt
+              ${compare_test}.cmp
+              ${compare_test}-ub.cmp
+      )
+      SET_TESTS_PROPERTIES (H5JAM-${testname}_NONE-CHECK_UB_1-clear-objects PROPERTIES DEPENDS "H5JAM-${testname}_NONE")
+      ADD_TEST (
+          NAME H5JAM-${testname}_NONE-CHECK_UB_1
+          COMMAND "${CMAKE_COMMAND}"
+              -D "TEST_PROGRAM=$<TARGET_FILE:tellub>"
+              -D "TEST_GET_PROGRAM=$<TARGET_FILE:getub>"
+              -D "TEST_CHECKUB=YES"
+              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
+              -D "TEST_HFILE=${compare_test}"
+              -D "TEST_UFILE=testfiles/${jamfile}"
+              -D "TEST_EXPECT=0"
+              -D "TEST_OFILE=${compare_orig}"
+              -P "${HDF5_RESOURCES_DIR}/userblockTest.cmake"
+      )
+      SET_TESTS_PROPERTIES (H5JAM-${testname}_NONE-CHECK_UB_1 PROPERTIES DEPENDS H5JAM-${testname}_NONE-CHECK_UB_1-clear-objects)
+      CHECKFILE (${testname} "H5JAM-${testname}_NONE-CHECK_UB_1" ${infile} ${chkfile})
+    ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+  ENDMACRO (JAMTEST_NONE testname jamfile infile setfile chkfile)
 
 ##############################################################################
 ##############################################################################
@@ -377,118 +422,45 @@ IF (BUILD_TESTING)
   # don't allow HDF5 format file as an user block file
   TEST_H5JAM_OUTPUT(h5jam-ub-nohdf5 1 -i testfiles/tall.h5 -u testfiles/tall.h5 -o tall-tmp.h5)
 
-  JAMTEST (tall_u10 u10.txt tall.h5 ta2.h5)
-  CHECKFILE (tall_u10 tall.h5 ta2.h5)
-#  CLEANUP (tall_u10 ta2.h5)
-  JAMTEST (tall_u511 u511.txt tall.h5 ta3.h5)
-  CHECKFILE (tall_u511 tall.h5 ta3.h5)
-#  CLEANUP (tall_u511 ta3.h5)
-  JAMTEST (tall_u512 u512.txt tall.h5 ta4.h5)
-  CHECKFILE (tall_u512 tall.h5 ta4.h5)
-#  CLEANUP (tall_u512 ta4.h5)
-  JAMTEST (tall_u513 u513.txt tall.h5 ta5.h5)
-  CHECKFILE (tall_u513 tall.h5 ta5.h5)
-#  CLEANUP (tall_u513 ta5.h5)
-
-  SETUP (ta_u10 tall.h5 ta.h5)
-  JAMTEST (ta_u10 u10.txt ta.h5 NONE)
-  CHECKFILE (ta_u10 tall.h5 ta.h5)
-  SETUP (ta_u511 tall.h5 ta.h5 NOCLEAN)
-  JAMTEST (ta_u511 u511.txt ta.h5 NONE)
-  CHECKFILE (ta_u511 tall.h5 ta.h5)
-  SETUP (ta_u512 tall.h5 ta.h5 NOCLEAN)
-  JAMTEST (ta_u512 u512.txt ta.h5 NONE)
-  CHECKFILE (ta_u512 tall.h5 ta.h5)
-  SETUP (ta_u513 tall.h5 ta.h5 NOCLEAN)
-  JAMTEST (ta_u513 u513.txt ta.h5 NONE)
-  CHECKFILE (ta_u513 tall.h5 ta.h5)
-#  CLEANUP (ta ta.h5)
-
-  JAMTEST (twithub_u10 u10.txt twithub.h5 tax2.h5)
-  CHECKFILE (twithub_u10 tall.h5 tax2.h5)
-#  CLEANUP (twithub_u10 tax2.h5)
-  JAMTEST (twithub_u511 u511.txt twithub.h5 tax3.h5)
-  CHECKFILE (twithub_u511 tall.h5 tax3.h5)
-#  CLEANUP (twithub_u511 tax3.h5)
-  JAMTEST (twithub_u512 u512.txt twithub.h5 tax4.h5)
-  CHECKFILE (twithub_u512 tall.h5 tax4.h5)
-#  CLEANUP (twithub_u512 tax4.h5)
-  JAMTEST (twithub_u513 u513.txt twithub.h5 tax5.h5)
-  CHECKFILE (twithub_u513 tall.h5 tax5.h5)
-#  CLEANUP (twithub_u513 tax5.h5)
-
-  JAMTEST (twithub513_u10 u10.txt twithub513.h5 tax6.h5)
-  CHECKFILE (twithub513_u10 tall.h5 tax6.h5)
-#  CLEANUP (twithub513_u10 tax6.h5)
-  JAMTEST (twithub513_u511 u511.txt twithub513.h5 tax7.h5)
-  CHECKFILE (twithub513_u511 tall.h5 tax7.h5)
-#  CLEANUP (twithub513_u511 tax7.h5)
-  JAMTEST (twithub513_u512 u512.txt twithub513.h5 tax8.h5)
-  CHECKFILE (twithub513_u512 tall.h5 tax8.h5)
-#  CLEANUP (twithub513_u512 tax8.h5)
-  JAMTEST (twithub513_u513 u513.txt twithub513.h5 tax9.h5)
-  CHECKFILE (twithub513_u513 tall.h5 tax9.h5)
-#  CLEANUP (twithub513_u513 tax9.h5)
-
-  JAMTEST (twithub_u10_c u10.txt twithub.h5 taz2.h5 --clobber)
-  CHECKFILE (twithub_u10_c tall.h5 taz2.h5)
-#  CLEANUP (twithub_u10_c taz2.h5)
-  JAMTEST (twithub_u511_c u511.txt twithub.h5 taz3.h5 --clobber)
-  CHECKFILE (twithub_u511_c tall.h5 taz3.h5)
-#  CLEANUP (twithub_u511_c taz3.h5)
-  JAMTEST (twithub_u512_c u512.txt twithub.h5 taz4.h5 --clobber)
-  CHECKFILE (twithub_u512_c tall.h5 taz4.h5)
-#  CLEANUP (twithub_u512_c taz4.h5)
-  JAMTEST (twithub_u513_c u513.txt twithub.h5 taz5.h5 --clobber)
-  CHECKFILE (twithub_u513_c tall.h5 taz5.h5)
-#  CLEANUP (twithub_u513_c taz5.h5)
-
-  JAMTEST (twithub513_u10_c u10.txt twithub513.h5 taz6.h5 --clobber)
-  CHECKFILE (twithub513_u10_c tall.h5 taz6.h5)
-#  CLEANUP (twithub513_u10_c taz6.h5)
-  JAMTEST (twithub513_u511_c u511.txt twithub513.h5 taz7.h5 --clobber)
-  CHECKFILE (twithub513_u511_c tall.h5 taz7.h5)
-#  CLEANUP (twithub513_u511_c taz7.h5)
-  JAMTEST (twithub513_u512_c u512.txt twithub513.h5 taz8.h5 --clobber)
-  CHECKFILE (twithub513_u512_c tall.h5 taz8.h5)
-#  CLEANUP (twithub513_u512_c taz8.h5)
-  JAMTEST (twithub513_u513_c u513.txt twithub513.h5 taz9.h5 --clobber)
-  CHECKFILE (twithub513_u513_c tall.h5 taz9.h5)
-#  CLEANUP (twithub513_u513_c taz9.h5)
-
-  SETUP (N_twithub_u10_c twithub.h5 tay2.h5)
-  JAMTEST (N_twithub_u10_c u10.txt tay2.h5 NONE --clobber)
-  CHECKFILE (N_twithub_u10_c tall.h5 tay2.h5)
-#  CLEANUP (N_twithub_u10_c tay2.h5)
-  SETUP (N_twithub_u511_c twithub.h5 tay3.h5)
-  JAMTEST (N_twithub_u511_c u511.txt tay3.h5 NONE --clobber)
-  CHECKFILE (N_twithub_u511_c tall.h5 tay3.h5)
-#  CLEANUP (N_twithub_u511_c tay3.h5)
-  SETUP (N_twithub_u512_c twithub.h5 tay4.h5)
-  JAMTEST (N_twithub_u512_c u512.txt tay4.h5 NONE --clobber)
-  CHECKFILE (N_twithub_u512_c tall.h5 tay4.h5)
-#  CLEANUP (N_twithub_u512_c tay4.h5)
-  SETUP (N_twithub_u513_c twithub.h5 tay5.h5)
-  JAMTEST (N_twithub_u513_c u513.txt tay5.h5 NONE --clobber)
-  CHECKFILE (N_twithub_u513_c tall.h5 tay5.h5)
-#  CLEANUP (N_twithub_u513_c tay5.h5)
-
-  SETUP (N_twithub513_u10_c twithub513.h5 tay6.h5)
-  JAMTEST (N_twithub513_u10_c u10.txt tay6.h5 NONE --clobber)
-  CHECKFILE (N_twithub513_u10_c tall.h5 tay6.h5)
-#  CLEANUP (N_twithub513_u10_c tay6.h5)
-  SETUP (N_twithub513_u511_c twithub513.h5 tay7.h5)
-  JAMTEST (N_twithub513_u511_c u511.txt tay7.h5 NONE --clobber)
-  CHECKFILE (N_twithub513_u511_c tall.h5 tay7.h5)
-#  CLEANUP (N_twithub513_u511_c tay7.h5)
-  SETUP (N_twithub513_u512_c twithub513.h5 tay8.h5)
-  JAMTEST (N_twithub513_u512_c u512.txt tay8.h5 NONE --clobber)
-  CHECKFILE (N_twithub513_u512_c tall.h5 tay8.h5)
-#  CLEANUP (N_twithub513_u512_c tay8.h5)
-  SETUP (N_twithub513_u513_c twithub513.h5 tay9.h5)
-  JAMTEST (N_twithub513_u513_c u513.txt tay9.h5 NONE --clobber)
-  CHECKFILE (N_twithub513_u513_c tall.h5 tay9.h5)
-#  CLEANUP (N_twithub513_u513_c tay9.h5)
+  JAMTEST (tall_u10 u10.txt tall.h5 tall.h5 ta2.h5)
+  JAMTEST (tall_u511 u511.txt tall.h5 tall.h5 ta3.h5)
+  JAMTEST (tall_u512 u512.txt tall.h5 tall.h5 ta4.h5)
+  JAMTEST (tall_u513 u513.txt tall.h5 tall.h5 ta5.h5)
+
+  JAMTEST_NONE (N_ta_u10 u10.txt tall.h5 tall.h5 ta6.h5)
+  JAMTEST_NONE (N_ta_u511 u511.txt tall.h5 tall.h5 ta7.h5)
+  JAMTEST_NONE (N_ta_u512 u512.txt tall.h5 tall.h5 ta8.h5)
+  JAMTEST_NONE (N_ta_u513 u513.txt tall.h5 tall.h5 ta9.h5)
+
+  JAMTEST (twithub_u10 u10.txt twithub.h5 tall.h5 tax2.h5)
+  JAMTEST (twithub_u511 u511.txt twithub.h5 tall.h5 tax3.h5)
+  JAMTEST (twithub_u512 u512.txt twithub.h5 tall.h5 tax4.h5)
+  JAMTEST (twithub_u513 u513.txt twithub.h5 tall.h5 tax5.h5)
+
+  JAMTEST (twithub513_u10 u10.txt twithub513.h5 tall.h5 tax6.h5)
+  JAMTEST (twithub513_u511 u511.txt twithub513.h5 tall.h5 tax7.h5)
+  JAMTEST (twithub513_u512 u512.txt twithub513.h5 tall.h5 tax8.h5)
+  JAMTEST (twithub513_u513 u513.txt twithub513.h5 tall.h5 tax9.h5)
+
+  JAMTEST (twithub_u10_c u10.txt twithub.h5 tall.h5 taz2.h5 --clobber)
+  JAMTEST (twithub_u511_c u511.txt twithub.h5 tall.h5 taz3.h5 --clobber)
+  JAMTEST (twithub_u512_c u512.txt twithub.h5 tall.h5 taz4.h5 --clobber)
+  JAMTEST (twithub_u513_c u513.txt twithub.h5 tall.h5 taz5.h5 --clobber)
+
+  JAMTEST (twithub513_u10_c u10.txt twithub513.h5 tall.h5 taz6.h5 --clobber)
+  JAMTEST (twithub513_u511_c u511.txt twithub513.h5 tall.h5 taz7.h5 --clobber)
+  JAMTEST (twithub513_u512_c u512.txt twithub513.h5 tall.h5 taz8.h5 --clobber)
+  JAMTEST (twithub513_u513_c u513.txt twithub513.h5 tall.h5 taz9.h5 --clobber)
+
+  JAMTEST_NONE (N_twithub_u10_c u10.txt tall.h5 twithub.h5 tay2.h5 --clobber)
+  JAMTEST_NONE (N_twithub_u511_c u511.txt tall.h5 twithub.h5 tay3.h5 --clobber)
+  JAMTEST_NONE (N_twithub_u512_c u512.txt tall.h5 twithub.h5 tay4.h5 --clobber)
+  JAMTEST_NONE (N_twithub_u513_c u513.txt tall.h5 twithub.h5 tay5.h5 --clobber)
+
+  JAMTEST_NONE (N_twithub513_u10_c u10.txt tall.h5 twithub513.h5 tay6.h5 --clobber)
+  JAMTEST_NONE (N_twithub513_u511_c u511.txt tall.h5 twithub513.h5 tay7.h5 --clobber)
+  JAMTEST_NONE (N_twithub513_u512_c u512.txt tall.h5 twithub513.h5 tay8.h5 --clobber)
+  JAMTEST_NONE (N_twithub513_u513_c u513.txt tall.h5 twithub513.h5 tay9.h5 --clobber)
 
 #-------------------------------
 # Testing h5unjam
@@ -496,32 +468,14 @@ IF (BUILD_TESTING)
   # help page
   TEST_H5UNJAM_OUTPUT(h5unjam-help 0 -h)
 
-  SETUP (twithub_tall twithub.h5 tai1.h5)
-  UNJAMTEST (twithub_tall tai1.h5 o10.txt taa1.h5)
-  CHECKFILE (twithub_tall tall.h5 taa1.h5)
-#  CLEANUP (twithub_tall taa1.h5 tai1.h5 o10.txt)
-  SETUP (twithub513_tall twithub513.h5 tai2.h5)
-  UNJAMTEST (twithub513_tall tai2.h5 o512.txt taa2.h5)
-  CHECKFILE (twithub513_tall tall.h5 taa2.h5)
-#  CLEANUP (twithub513_tall taa2.h5 tai2.h5 o512.txt)
-
-  SETUP (N_twithub_tall twithub.h5 tai3.h5)
-  UNJAMTEST (N_twithub_tall tai3.h5 NONE taa3.h5)
-  CHECKFILE (N_twithub_tall tall.h5 taa3.h5)
-#  CLEANUP (N_twithub_tall taa3.h5 tai3.h5)
-  SETUP (N_twithub513_tall twithub513.h5 tai4.h5)
-  UNJAMTEST (N_twithub513_tall tai4.h5 NONE taa4.h5)
-  CHECKFILE (N_twithub513_tall tall.h5 taa4.h5)
-#  CLEANUP (N_twithub513_tall taa4.h5 tai4.h5)
-
-  SETUP (D_twithub_tall twithub.h5 taj2.h5)
-  UNJAMTEST (D_twithub_tall taj2.h5 NONE tac2.h5 --delete)
-  CHECKFILE (D_twithub_tall tall.h5 tac2.h5)
-#  CLEANUP (D_twithub_tall tac2.h5 taj2.h5)
-  SETUP (D_twithub513_tall twithub513.h5 taj3.h5)
-  UNJAMTEST (D_twithub513_tall taj3.h5 NONE tac3.h5 --delete)
-  CHECKFILE (D_twithub513_tall tall.h5 tac3.h5)
-#  CLEANUP (D_twithub513_tall tac3.h5 taj3.h5)
+  UNJAMTEST (twithub_tall twithub.h5 tai1.h5 o10.txt tall.h5 taa1.h5)
+  UNJAMTEST (twithub513_tall twithub513.h5 tai2.h5 o512.txt tall.h5 taa2.h5)
+
+  UNJAMTEST (N_twithub_tall twithub.h5 tai3.h5 NONE tall.h5 taa3.h5)
+  UNJAMTEST (N_twithub513_tall twithub513.h5 tai4.h5 NONE tall.h5 taa4.h5)
+
+  UNJAMTEST (D_twithub_tall twithub.h5 taj2.h5 NONE tall.h5 tac2.h5 --delete)
+  UNJAMTEST (D_twithub513_tall twithub513.h5 taj3.h5 NONE tall.h5 tac3.h5 --delete)
 
 ENDIF (BUILD_TESTING)
 
diff --git a/tools/h5jam/Makefile.in b/tools/h5jam/Makefile.in
index ff8b089..fd170fd 100644
--- a/tools/h5jam/Makefile.in
+++ b/tools/h5jam/Makefile.in
@@ -248,6 +248,7 @@ H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
 HAVE_DMALLOC = @HAVE_DMALLOC@
 HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
 HDF5_HL = @HDF5_HL@
 HDF5_INTERFACES = @HDF5_INTERFACES@
 HDF_CXX = @HDF_CXX@
@@ -299,7 +300,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
 PATH_SEPARATOR = @PATH_SEPARATOR@
 PERL = @PERL@
-PTHREAD = @PTHREAD@
 RANLIB = @RANLIB@
 ROOT = @ROOT@
 RUNPARALLEL = @RUNPARALLEL@
diff --git a/tools/h5jam/testh5jam.sh.in b/tools/h5jam/testh5jam.sh.in
index b2c6bec..86edbee 100644
--- a/tools/h5jam/testh5jam.sh.in
+++ b/tools/h5jam/testh5jam.sh.in
@@ -377,7 +377,7 @@ JAMTEST() {
 			compare_orig="xxofile.h5"
 			cleanup="$cleanup $compare_orig"
 		else
-			# output goes to $4,  compare ofile to ubfile
+			# output goes to $3,  compare ofile to ubfile
 			ofile="$3"
 			compare_test="$ofile"
 			compare_orig="$ifile"
@@ -539,19 +539,22 @@ JAMTEST $TESTDIR/u513.txt $TESTDIR/tall.h5 ta5.h5
 CHECKFILE $TESTDIR/tall.h5 ta5.h5
 CLEANUP ta5.h5
 
-SETUP $TESTDIR/tall.h5 ta.h5
-JAMTEST $TESTDIR/u10.txt ta.h5 
-CHECKFILE $TESTDIR/tall.h5 ta.h5
-SETUP $TESTDIR/tall.h5 ta.h5
-JAMTEST $TESTDIR/u511.txt ta.h5 
-CHECKFILE $TESTDIR/tall.h5 ta.h5
-SETUP $TESTDIR/tall.h5 ta.h5
-JAMTEST $TESTDIR/u512.txt ta.h5 
-CHECKFILE $TESTDIR/tall.h5 ta.h5
-SETUP $TESTDIR/tall.h5 ta.h5
-JAMTEST $TESTDIR/u513.txt ta.h5 
-CHECKFILE $TESTDIR/tall.h5 ta.h5
-CLEANUP ta.h5
+SETUP $TESTDIR/tall.h5 ta6.h5
+JAMTEST $TESTDIR/u10.txt ta6.h5 
+CHECKFILE $TESTDIR/tall.h5 ta6.h5
+CLEANUP ta6.h5
+SETUP $TESTDIR/tall.h5 ta7.h5
+JAMTEST $TESTDIR/u511.txt ta7.h5 
+CHECKFILE $TESTDIR/tall.h5 ta7.h5
+CLEANUP ta7.h5
+SETUP $TESTDIR/tall.h5 ta8.h5
+JAMTEST $TESTDIR/u512.txt ta8.h5 
+CHECKFILE $TESTDIR/tall.h5 ta8.h5
+CLEANUP ta8.h5
+SETUP $TESTDIR/tall.h5 ta9.h5
+JAMTEST $TESTDIR/u513.txt ta9.h5 
+CHECKFILE $TESTDIR/tall.h5 ta9.h5
+CLEANUP ta9.h5
 
 JAMTEST $TESTDIR/u10.txt $TESTDIR/twithub.h5 tax2.h5
 CHECKFILE $TESTDIR/tall.h5 tax2.h5
diff --git a/tools/h5ls/CMakeLists.txt b/tools/h5ls/CMakeLists.txt
index 5cce6cb..70943b5 100644
--- a/tools/h5ls/CMakeLists.txt
+++ b/tools/h5ls/CMakeLists.txt
@@ -145,10 +145,9 @@ IF (BUILD_TESTING)
       IF (NOT "${last_test}" STREQUAL "")
         SET_TESTS_PROPERTIES (H5LS-${resultfile} PROPERTIES DEPENDS ${last_test})
       ENDIF (NOT "${last_test}" STREQUAL "")
-      SET (last_test "H5LS-${resultfile}")
     ELSE (HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
-          NAME H5LS-clear-${resultfile}-objects
+          NAME H5LS-${resultfile}-clear-objects
           COMMAND    ${CMAKE_COMMAND}
               -E remove ./testfiles/${resultfile}.out ./testfiles/${resultfile}.out.err
       )
@@ -163,7 +162,7 @@ IF (BUILD_TESTING)
               -D "TEST_REFERENCE=${resultfile}.ls"
               -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
       )
-      SET_TESTS_PROPERTIES (H5LS-${resultfile} PROPERTIES DEPENDS "H5LS-clear-${resultfile}-objects")
+      SET_TESTS_PROPERTIES (H5LS-${resultfile} PROPERTIES DEPENDS "H5LS-${resultfile}-clear-objects")
     ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
   ENDMACRO (ADD_H5_TEST file)
 
diff --git a/tools/h5ls/Makefile.in b/tools/h5ls/Makefile.in
index 7aa4329..1861b03 100644
--- a/tools/h5ls/Makefile.in
+++ b/tools/h5ls/Makefile.in
@@ -228,6 +228,7 @@ H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
 HAVE_DMALLOC = @HAVE_DMALLOC@
 HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
 HDF5_HL = @HDF5_HL@
 HDF5_INTERFACES = @HDF5_INTERFACES@
 HDF_CXX = @HDF_CXX@
@@ -279,7 +280,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
 PATH_SEPARATOR = @PATH_SEPARATOR@
 PERL = @PERL@
-PTHREAD = @PTHREAD@
 RANLIB = @RANLIB@
 ROOT = @ROOT@
 RUNPARALLEL = @RUNPARALLEL@
diff --git a/tools/h5repack/CMakeLists.txt b/tools/h5repack/CMakeLists.txt
index 7166357..156f6d8 100644
--- a/tools/h5repack/CMakeLists.txt
+++ b/tools/h5repack/CMakeLists.txt
@@ -150,24 +150,23 @@ IF (BUILD_TESTING)
     IF (${testtype} STREQUAL "SKIP")
       IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
         ADD_TEST (
-            NAME H5REPACK-${testname}-SKIPPED
-            COMMAND ${CMAKE_COMMAND} -E echo "SKIP ${ARGN} -i ${PROJECT_BINARY_DIR}/testfiles/${testfile} -o ${PROJECT_BINARY_DIR}/testfiles/out.${testfile}"
+            NAME H5REPACK_OLD-${testname}-SKIPPED
+            COMMAND ${CMAKE_COMMAND} -E echo "SKIP ${ARGN} -i ${PROJECT_BINARY_DIR}/testfiles/${testfile} -o ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${testfile}"
         )
       ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
     ELSE (${testtype} STREQUAL "SKIP")
       ADD_TEST (
-          NAME H5REPACK-${testname}
-          COMMAND $<TARGET_FILE:h5repack> ${ARGN} -i ${PROJECT_BINARY_DIR}/testfiles/${testfile} -o ${PROJECT_BINARY_DIR}/testfiles/out.${testfile}
+          NAME H5REPACK_OLD-${testname}
+          COMMAND $<TARGET_FILE:h5repack> ${ARGN} -i ${PROJECT_BINARY_DIR}/testfiles/${testfile} -o ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${testfile}
       )
       IF (NOT "${last_test}" STREQUAL "")
-        SET_TESTS_PROPERTIES (H5REPACK-${testname} PROPERTIES DEPENDS ${last_test})
+        SET_TESTS_PROPERTIES (H5REPACK_OLD-${testname} PROPERTIES DEPENDS ${last_test})
       ENDIF (NOT "${last_test}" STREQUAL "")
       ADD_TEST (
-          NAME H5REPACK-DIFF_${testname}
-          COMMAND $<TARGET_FILE:h5diff> ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out.${testfile}
+          NAME H5REPACK_OLD-${testname}_DFF
+          COMMAND $<TARGET_FILE:h5diff> ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${testfile}
       )
-      SET_TESTS_PROPERTIES (H5REPACK-DIFF_${testname} PROPERTIES DEPENDS H5REPACK-${testname})
-      SET (last_test "H5REPACK-DIFF_${testname}")
+      SET_TESTS_PROPERTIES (H5REPACK_OLD-${testname}_DFF PROPERTIES DEPENDS H5REPACK_OLD-${testname})
     ENDIF (${testtype} STREQUAL "SKIP")
   ENDMACRO (ADD_H5_TEST_OLD)
 
@@ -176,23 +175,22 @@ IF (BUILD_TESTING)
       IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
         ADD_TEST (
             NAME H5REPACK-${testname}-SKIPPED
-            COMMAND ${CMAKE_COMMAND} -E echo "SKIP ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out.${testfile}"
+            COMMAND ${CMAKE_COMMAND} -E echo "SKIP ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${testfile}"
         )
       ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
     ELSE (${testtype} STREQUAL "SKIP")
       ADD_TEST (
           NAME H5REPACK-${testname}
-          COMMAND $<TARGET_FILE:h5repack> ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out.${testfile}
+          COMMAND $<TARGET_FILE:h5repack> ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${testfile}
       )
       IF (NOT "${last_test}" STREQUAL "")
         SET_TESTS_PROPERTIES (H5REPACK-${testname} PROPERTIES DEPENDS ${last_test})
       ENDIF (NOT "${last_test}" STREQUAL "")
       ADD_TEST (
-          NAME H5REPACK-DIFF_${testname}
-          COMMAND $<TARGET_FILE:h5diff> ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out.${testfile}
+          NAME H5REPACK-${testname}_DFF
+          COMMAND $<TARGET_FILE:h5diff> ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${testfile}
       )
-      SET_TESTS_PROPERTIES (H5REPACK-DIFF_${testname} PROPERTIES DEPENDS H5REPACK-${testname})
-      SET (last_test "H5REPACK-DIFF_${testname}")
+      SET_TESTS_PROPERTIES (H5REPACK-${testname}_DFF PROPERTIES DEPENDS H5REPACK-${testname})
     ENDIF (${testtype} STREQUAL "SKIP")
   ENDMACRO (ADD_H5_TEST)
 
@@ -200,22 +198,22 @@ IF (BUILD_TESTING)
     IF (${testtype} STREQUAL "SKIP")
       IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
         ADD_TEST (
-            NAME H5REPACK-${testname}-SKIPPED
-            COMMAND ${CMAKE_COMMAND} -E echo "SKIP ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${resultfile} ${PROJECT_BINARY_DIR}/testfiles/out.${resultfile}"
+            NAME H5REPACK_CMP-${testname}-SKIPPED
+            COMMAND ${CMAKE_COMMAND} -E echo "SKIP ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${resultfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${resultfile}"
         )
       ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
     ELSE (${testtype} STREQUAL "SKIP")
       # If using memchecker add tests without using scripts
       IF (HDF5_ENABLE_USING_MEMCHECKER)
-        ADD_TEST (NAME H5REPACK-${testname} COMMAND $<TARGET_FILE:h5repack> ${ARGN} testfiles/${resultfile} testfiles/out.${resultfile})
+        ADD_TEST (NAME H5REPACK_CMP-${testname} COMMAND $<TARGET_FILE:h5repack> ${ARGN} testfiles/${resultfile} testfiles/out-${testname}.${resultfile})
       ELSE (HDF5_ENABLE_USING_MEMCHECKER)
         ADD_TEST (
-            NAME H5REPACK-${testname}
+            NAME H5REPACK_CMP-${testname}
             COMMAND "${CMAKE_COMMAND}"
                 -D "TEST_PROGRAM=$<TARGET_FILE:h5repack>"
-                -D "TEST_ARGS:STRING=${ARGN};testfiles/${resultfile};testfiles/out.${resultfile}"
+                -D "TEST_ARGS:STRING=${ARGN};testfiles/${resultfile};testfiles/out-${testname}.${resultfile}"
                 -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-                -D "TEST_OUTPUT=./testfiles/${resultfile}.out"
+                -D "TEST_OUTPUT=./testfiles/${resultfile}-${testname}.out"
                 -D "TEST_EXPECT=${resultcode}"
                 -D "TEST_FILTER:STRING=${testfilter}"
                 -D "TEST_REFERENCE=testfiles/${resultfile}.ddl"
@@ -223,9 +221,8 @@ IF (BUILD_TESTING)
         )
       ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
       IF (NOT "${last_test}" STREQUAL "")
-        SET_TESTS_PROPERTIES (H5REPACK-${testname} PROPERTIES DEPENDS ${last_test})
+        SET_TESTS_PROPERTIES (H5REPACK_CMP-${testname} PROPERTIES DEPENDS ${last_test})
       ENDIF (NOT "${last_test}" STREQUAL "")
-      SET (last_test "H5REPACK-${testname}")
     ENDIF (${testtype} STREQUAL "SKIP")
   ENDMACRO (ADD_H5_CMP_TEST)
 
@@ -234,28 +231,37 @@ IF (BUILD_TESTING)
       IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
         ADD_TEST (
             NAME H5REPACK_VERIFY_LAYOUT-${testname}-SKIPPED
-            COMMAND ${CMAKE_COMMAND} -E echo "SKIP -d ${testdset} -pH ${PROJECT_BINARY_DIR}/testfiles/out.${resultfile}"
+            COMMAND ${CMAKE_COMMAND} -E echo "SKIP -d ${testdset} -pH ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${resultfile}"
         )
       ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
     ELSE (${testtype} STREQUAL "SKIP")
       IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+        ADD_TEST (
+            NAME H5REPACK_VERIFY_LAYOUT-${testname}
+            COMMAND $<TARGET_FILE:h5repack> ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${testfile}
+        )
+        IF (NOT "${last_test}" STREQUAL "")
+          SET_TESTS_PROPERTIES (H5REPACK_VERIFY_LAYOUT-${testname} PROPERTIES DEPENDS ${last_test})
+        ENDIF (NOT "${last_test}" STREQUAL "")
+        ADD_TEST (
+            NAME H5REPACK_VERIFY_LAYOUT-${testname}_DFF
+            COMMAND $<TARGET_FILE:h5diff> ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${testfile}
+        )
+        SET_TESTS_PROPERTIES (H5REPACK_VERIFY_LAYOUT-${testname}_DFF PROPERTIES DEPENDS H5REPACK_VERIFY_LAYOUT-${testname})
         IF (${resultcode} STREQUAL "0")
           ADD_TEST (
-              NAME H5REPACK_VERIFY_LAYOUT-${testname}
+              NAME H5REPACK_VERIFY_LAYOUT-${testname}_DMP
               COMMAND "${CMAKE_COMMAND}"
                   -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
-                  -D "TEST_ARGS:STRING=-d;${testdset};-pH;testfiles/out.${testfile}"
+                  -D "TEST_ARGS:STRING=-d;${testdset};-pH;testfiles/out-${testname}.${testfile}"
                   -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-                  -D "TEST_OUTPUT=./testfiles/${testfile}-v.out"
+                  -D "TEST_OUTPUT=./testfiles/${testfile}-${testname}-v.out"
                   -D "TEST_EXPECT=${resultcode}"
                   -D "TEST_FILTER:STRING=${testfilter}"
                   -D "TEST_REFERENCE=${testfilter}"
                   -P "${HDF5_RESOURCES_DIR}/grepTest.cmake"
           )
-          IF (NOT "${last_test}" STREQUAL "")
-            SET_TESTS_PROPERTIES (H5REPACK_VERIFY_LAYOUT-${testname} PROPERTIES DEPENDS ${last_test})
-          ENDIF (NOT "${last_test}" STREQUAL "")
-          SET (last_test "H5REPACK_VERIFY_LAYOUT-${testname}")
+          SET_TESTS_PROPERTIES (H5REPACK_VERIFY_LAYOUT-${testname}_DMP PROPERTIES DEPENDS H5REPACK_VERIFY_LAYOUT-${testname}_DFF)
         ELSE (${resultcode} STREQUAL "0")
           IF (${testfilter} STREQUAL "CHUNKED")
             SET (nottestfilter "(CONTIGUOUS|COMPACT)")
@@ -267,21 +273,18 @@ IF (BUILD_TESTING)
             SET (nottestfilter "(CONTIGUOUS|CHUNK)")
           ENDIF (${testfilter} STREQUAL "COMPACT")
           ADD_TEST (
-              NAME H5REPACK_VERIFY_LAYOUT_ALL-${testname}
+              NAME H5REPACK_VERIFY_LAYOUT-${testname}_DMP
               COMMAND "${CMAKE_COMMAND}"
                   -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
-                  -D "TEST_ARGS:STRING=-pH;testfiles/out.${testfile}"
+                  -D "TEST_ARGS:STRING=-pH;testfiles/out-${testname}.${testfile}"
                   -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-                  -D "TEST_OUTPUT=./testfiles/${testfile}-v.out"
+                  -D "TEST_OUTPUT=./testfiles/${testfile}-${testname}-v.out"
                   -D "TEST_EXPECT=${resultcode}"
                   -D "TEST_FILTER:STRING=${nottestfilter}"
                   -D "TEST_REFERENCE=${testfilter}"
                   -P "${HDF5_RESOURCES_DIR}/grepTest.cmake"
           )
-          IF (NOT "${last_test}" STREQUAL "")
-            SET_TESTS_PROPERTIES (H5REPACK_VERIFY_LAYOUT_ALL-${testname} PROPERTIES DEPENDS ${last_test})
-          ENDIF (NOT "${last_test}" STREQUAL "")
-          SET (last_test "H5REPACK_VERIFY_LAYOUT_ALL-${testname}")
+          SET_TESTS_PROPERTIES (H5REPACK_VERIFY_LAYOUT-${testname}_DMP PROPERTIES DEPENDS H5REPACK_VERIFY_LAYOUT-${testname}_DFF)
         ENDIF (${resultcode} STREQUAL "0")
       ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
     ENDIF (${testtype} STREQUAL "SKIP")
@@ -289,25 +292,21 @@ IF (BUILD_TESTING)
 
   MACRO (ADD_H5_TEST_META testname testfile)
       ADD_TEST (
-          NAME H5REPACK-${testname}_N
-          COMMAND $<TARGET_FILE:h5repack> ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out_N.${testname}.h5
+          NAME H5REPACK_META-${testname}_N
+          COMMAND $<TARGET_FILE:h5repack> ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}_N.${testname}.h5
       )
       IF (NOT "${last_test}" STREQUAL "")
-        SET_TESTS_PROPERTIES (H5REPACK-${testname}_N PROPERTIES DEPENDS ${last_test})
+        SET_TESTS_PROPERTIES (H5REPACK_META-${testname}_N PROPERTIES DEPENDS ${last_test})
       ENDIF (NOT "${last_test}" STREQUAL "")
       ADD_TEST (
-          NAME H5REPACK-${testname}_M
-          COMMAND $<TARGET_FILE:h5repack> ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out_M.${testname}.h5
+          NAME H5REPACK_META-${testname}_M
+          COMMAND $<TARGET_FILE:h5repack> ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}_M.${testname}.h5
       )
-      IF (NOT "${last_test}" STREQUAL "")
-        SET_TESTS_PROPERTIES (H5REPACK-${testname}_M PROPERTIES DEPENDS ${last_test})
-      ENDIF (NOT "${last_test}" STREQUAL "")
-      ADD_TEST (NAME H5REPACK-${testname} COMMAND ${CMAKE_COMMAND} -E compare_files ${PROJECT_BINARY_DIR}/testfiles/out_N.${testname}.h5 ${PROJECT_BINARY_DIR}/testfiles/out_M.${testname}.h5)
-      SET_TESTS_PROPERTIES (H5REPACK-${testname} PROPERTIES WILL_FAIL "true")
-      IF (NOT "${last_test}" STREQUAL "")
-        SET_TESTS_PROPERTIES (H5REPACK-${testname} PROPERTIES DEPENDS ${last_test})
-      ENDIF (NOT "${last_test}" STREQUAL "")
-      SET (last_test "H5REPACK-${testname}")
+      SET_TESTS_PROPERTIES (H5REPACK_META-${testname}_M PROPERTIES DEPENDS H5REPACK_META-${testname}_N)
+
+      ADD_TEST (NAME H5REPACK_META-${testname} COMMAND ${CMAKE_COMMAND} -E compare_files ${PROJECT_BINARY_DIR}/testfiles/out-${testname}_N.${testname}.h5 ${PROJECT_BINARY_DIR}/testfiles/out-${testname}_M.${testname}.h5)
+      SET_TESTS_PROPERTIES (H5REPACK_META-${testname} PROPERTIES WILL_FAIL "true")
+      SET_TESTS_PROPERTIES (H5REPACK_META-${testname} PROPERTIES DEPENDS H5REPACK_META-${testname}_M)
   ENDMACRO (ADD_H5_TEST_META)
 
 ##############################################################################
@@ -316,43 +315,158 @@ IF (BUILD_TESTING)
 ##############################################################################
 ##############################################################################
 
+  # --------------------------------------------------------------------
+  # test file names 
+  # --------------------------------------------------------------------
+  SET (INFO_FILE testfiles/h5repack.info)
+
+  SET (FILE0 h5repack_fill.h5)
+  SET (FILE1 h5repack_objs.h5)
+  SET (FILE2 h5repack_attr.h5)
+  SET (FILE3 h5repack_hlink.h5)
+  SET (FILE4 h5repack_layout.h5)
+  SET (FILE5 h5repack_early.h5)
+  SET (FILE7 h5repack_szip.h5)
+  SET (FILE8 h5repack_deflate.h5)
+  SET (FILE9 h5repack_shuffle.h5)
+  SET (FILE10 h5repack_fletcher.h5)
+  SET (FILE11 h5repack_filters.h5)
+  SET (FILE12 h5repack_nbit.h5)
+  SET (FILE13 h5repack_soffset.h5)
+  SET (FILE14 h5repack_layouto.h5 )     # A file with an older version of the layout message (copy of test/tlayouto.h5)
+  SET (FILE15 h5repack_named_dtypes.h5)
+  SET (FILE16 tfamily%05d.h5)           # located in common testfiles folder
+  SET (FILE18 h5repack_layout2.h5)
+  SET (FILE_REF h5repack_refs.h5)
+  SET (FILE_ATTR_REF h5repack_attr_refs.h5)
+
   # Remove any output file left over from previous test run
   ADD_TEST (
       NAME H5REPACK-clearall-objects
       COMMAND    ${CMAKE_COMMAND}
           -E remove 
-         ./testfiles/h5repack_filters.h5.out
-         ./testfiles/h5repack_filters.h5.out.err
-         ./testfiles/h5repack_layout.h5-v.out
-         ./testfiles/h5repack_layout.h5-v.out.err
-         ./testfiles/h5repack_layout2.h5-v.out
-         ./testfiles/h5repack_layout2.h5-v.out.err
-         ./testfiles/h5repack_layout3.h5-v.out
-         ./testfiles/h5repack_layout3.h5-v.out.err
-         ./testfiles/out.tfamily%05d.h5
-         ./testfiles/out.h5diff_attr1.h5
-         ./testfiles/out.h5repack_attr.h5
-         ./testfiles/out.h5repack_attr_refs.h5
-         ./testfiles/out.h5repack_deflate.h5
-         ./testfiles/out.h5repack_early.h5
-         ./testfiles/out.h5repack_fill.h5
-         ./testfiles/out.h5repack_filters.h5
-         ./testfiles/out.h5repack_fletcher.h5
-         ./testfiles/out.h5repack_hlink.h5
-         ./testfiles/out.h5repack_layout.h5
-         ./testfiles/out.h5repack_layouto.h5
-         ./testfiles/out.h5repack_layout2.h5
-         ./testfiles/out.h5repack_layout3.h5
-         ./testfiles/out.h5repack_named_dtypes.h5
-         ./testfiles/out.h5repack_nbit.h5
-         ./testfiles/out.h5repack_objs.h5
-         ./testfiles/out.h5repack_refs.h5
-         ./testfiles/out.h5repack_shuffle.h5
-         ./testfiles/out.h5repack_soffset.h5
-         ./testfiles/out_M.meta_short.h5
-         ./testfiles/out_N.meta_short.h5
-         ./testfiles/out_M.meta_long.h5
-         ./testfiles/out_N.meta_long.h5
+         ./testfiles/h5repack_filters.h5-gzip_verbose_filters.out
+         ./testfiles/h5repack_filters.h5-gzip_verbose_filters.out.err
+         ./testfiles/h5repack_layout.h5-chunk_18x13-v.out
+         ./testfiles/h5repack_layout.h5-chunk_18x13-v.out.err
+         ./testfiles/h5repack_layout.h5-chunk_20x10-v.out
+         ./testfiles/h5repack_layout.h5-chunk_20x10-v.out.err
+         ./testfiles/h5repack_layout.h5-chunk_compa-v.out
+         ./testfiles/h5repack_layout.h5-chunk_compa-v.out.err
+         ./testfiles/h5repack_layout.h5-chunk_conti-v.out
+         ./testfiles/h5repack_layout.h5-chunk_conti-v.out.err
+         ./testfiles/h5repack_layout.h5-compa-v.out
+         ./testfiles/h5repack_layout.h5-compa-v.out.err
+         ./testfiles/h5repack_layout.h5-conti-v.out
+         ./testfiles/h5repack_layout.h5-conti-v.out.err
+         ./testfiles/h5repack_layout.h5-dset2_chunk_20x10-v.out
+         ./testfiles/h5repack_layout.h5-dset2_chunk_20x10-v.out.err
+         ./testfiles/h5repack_layout.h5-dset2_compa-v.out
+         ./testfiles/h5repack_layout.h5-dset2_compa-v.out.err
+         ./testfiles/h5repack_layout.h5-dset2_conti-v.out
+         ./testfiles/h5repack_layout.h5-dset2_conti-v.out.err
+         ./testfiles/h5repack_layout.h5-dset_compa_chunk-v.out
+         ./testfiles/h5repack_layout.h5-dset_compa_chunk-v.out.err
+         ./testfiles/h5repack_layout.h5-dset_compa_compa-v.out
+         ./testfiles/h5repack_layout.h5-dset_compa_compa-v.out.err
+         ./testfiles/h5repack_layout.h5-dset_compa_conti-v.out
+         ./testfiles/h5repack_layout.h5-dset_compa_conti-v.out.err
+         ./testfiles/h5repack_layout.h5-dset_conti_chunk-v.out
+         ./testfiles/h5repack_layout.h5-dset_conti_chunk-v.out.err
+         ./testfiles/h5repack_layout.h5-dset_conti_compa-v.out
+         ./testfiles/h5repack_layout.h5-dset_conti_compa-v.out.err
+         ./testfiles/h5repack_layout.h5-dset_conti_conti-v.out
+         ./testfiles/h5repack_layout.h5-dset_conti_conti-v.out.err
+         ./testfiles/h5repack_layout.h5-layout_long_switches-v.out
+         ./testfiles/h5repack_layout.h5-layout_long_switches-v.out.err
+         ./testfiles/h5repack_layout.h5-layout_short_switches-v.out
+         ./testfiles/h5repack_layout.h5-layout_short_switches-v.out.err
+         ./testfiles/h5repack_layout2.h5-contig_small_compa-v.out
+         ./testfiles/h5repack_layout2.h5-contig_small_compa-v.out.err
+         ./testfiles/h5repack_layout2.h5-contig_small_fixed_compa-v.out
+         ./testfiles/h5repack_layout2.h5-contig_small_fixed_compa-v.out.err
+         ./testfiles/h5repack_layout3.h5-chunk2chunk-v.out
+         ./testfiles/h5repack_layout3.h5-chunk2chunk-v.out.err
+         ./testfiles/h5repack_layout3.h5-chunk2compa-v.out
+         ./testfiles/h5repack_layout3.h5-chunk2compa-v.out.err
+         ./testfiles/h5repack_layout3.h5-chunk2conti-v.out
+         ./testfiles/h5repack_layout3.h5-chunk2conti-v.out.err
+         ./testfiles/h5repack_layout3.h5-error1-v.out
+         ./testfiles/h5repack_layout3.h5-error1-v.out.err
+         ./testfiles/h5repack_layout3.h5-error2-v.out
+         ./testfiles/h5repack_layout3.h5-error2-v.out.err
+         ./testfiles/h5repack_layout3.h5-error3-v.out
+         ./testfiles/h5repack_layout3.h5-error3-v.out.err
+         ./testfiles/out-family.tfamily%05d.h5
+         ./testfiles/out-HDFFV-7840.h5diff_attr1.h5
+         ./testfiles/out-attr.h5repack_attr.h5
+         ./testfiles/out-native_attr.h5repack_attr.h5
+         ./testfiles/out-HDFFV-5932.h5repack_attr_refs.h5
+         ./testfiles/out-deflate_copy.h5repack_deflate.h5
+         ./testfiles/out-deflate_remove.h5repack_deflate.h5
+         ./testfiles/out-early.h5repack_early.h5
+         ./testfiles/out-fill.h5repack_fill.h5
+         ./testfiles/out-native_fill.h5repack_fill.h5
+         ./testfiles/out-gzip_verbose_filters.h5repack_filters.h5
+         ./testfiles/out-fletcher_copy.h5repack_fletcher.h5
+         ./testfiles/out-fletcher_remove.h5repack_fletcher.h5
+         ./testfiles/out-hlink.h5repack_hlink.h5
+         ./testfiles/out-chunk_18x13.h5repack_layout.h5
+         ./testfiles/out-chunk_20x10.h5repack_layout.h5
+         ./testfiles/out-chunk_compa.h5repack_layout.h5
+         ./testfiles/out-chunk_conti.h5repack_layout.h5
+         ./testfiles/out-compa.h5repack_layout.h5
+         ./testfiles/out-conti.h5repack_layout.h5
+         ./testfiles/out-deflate_file.h5repack_layout.h5
+         ./testfiles/out-deflate_limit.h5repack_layout.h5
+         ./testfiles/out-dset2_chunk_20x10.h5repack_layout.h5
+         ./testfiles/out-dset2_compa.h5repack_layout.h5
+         ./testfiles/out-dset2_conti.h5repack_layout.h5
+         ./testfiles/out-dset_compa_chunk.h5repack_layout.h5
+         ./testfiles/out-dset_compa_compa.h5repack_layout.h5
+         ./testfiles/out-dset_compa_conti.h5repack_layout.h5
+         ./testfiles/out-dset_conti_chunk.h5repack_layout.h5
+         ./testfiles/out-dset_conti_compa.h5repack_layout.h5
+         ./testfiles/out-dset_conti_conti.h5repack_layout.h5
+         ./testfiles/out-fletcher_all.h5repack_layout.h5
+         ./testfiles/out-fletcher_individual.h5repack_layout.h5
+         ./testfiles/out-global_filters.h5repack_layout.h5
+         ./testfiles/out-gzip_all.h5repack_layout.h5
+         ./testfiles/out-gzip_individual.h5repack_layout.h5
+         ./testfiles/out-layout.h5repack_layout.h5
+         ./testfiles/out-layout_long_switches.h5repack_layout.h5
+         ./testfiles/out-layout_short_switches.h5repack_layout.h5
+         ./testfiles/out-old_style_layout_short_switches.h5repack_layout.h5
+         ./testfiles/out-shuffle_all.h5repack_layout.h5
+         ./testfiles/out-shuffle_individual.h5repack_layout.h5
+         ./testfiles/out-upgrade_layout.h5repack_layouto.h5
+         ./testfiles/out-contig_small_compa.h5repack_layout2.h5
+         ./testfiles/out-contig_small_fixed_compa.h5repack_layout2.h5
+         ./testfiles/out-chunk2chunk.h5repack_layout3.h5
+         ./testfiles/out-chunk2compa.h5repack_layout3.h5
+         ./testfiles/out-chunk2conti.h5repack_layout3.h5
+         ./testfiles/out-error1.h5repack_layout3.h5
+         ./testfiles/out-error2.h5repack_layout3.h5
+         ./testfiles/out-error3.h5repack_layout3.h5
+         ./testfiles/out-error4.h5repack_layout3.h5
+         ./testfiles/out-committed_dt.h5repack_named_dtypes.h5
+         ./testfiles/out-nbit_add.h5repack_nbit.h5
+         ./testfiles/out-nbit_copy.h5repack_nbit.h5
+         ./testfiles/out-nbit_remove.h5repack_nbit.h5
+         ./testfiles/out-add_alignment.h5repack_objs.h5
+         ./testfiles/out-add_userblock.h5repack_objs.h5
+         ./testfiles/out-objs.h5repack_objs.h5
+         ./testfiles/out-gt_mallocsize.h5repack_objs.h5
+         ./testfiles/out-bug1814.h5repack_refs.h5
+         ./testfiles/out-shuffle_copy.h5repack_shuffle.h5
+         ./testfiles/out-shuffle_remove.h5repack_shuffle.h5
+         ./testfiles/out-scale_add.h5repack_soffset.h5
+         ./testfiles/out-scale_copy.h5repack_soffset.h5
+         ./testfiles/out-scale_remove.h5repack_soffset.h5
+         ./testfiles/out-meta_short_M.meta_short.h5
+         ./testfiles/out-meta_short_N.meta_short.h5
+         ./testfiles/out-meta_long_M.meta_long.h5
+         ./testfiles/out-meta_long_N.meta_long.h5
          # from the h5repacktst
          h5repack_attr.h5
          h5repack_attr_out.h5
@@ -398,32 +512,6 @@ IF (BUILD_TESTING)
   IF (NOT "${last_test}" STREQUAL "")
     SET_TESTS_PROPERTIES (H5REPACK-clearall-objects PROPERTIES DEPENDS ${last_test})
   ENDIF (NOT "${last_test}" STREQUAL "")
-  SET (last_test "H5REPACK-clearall-objects")
-
-  # --------------------------------------------------------------------
-  # test file names 
-  # --------------------------------------------------------------------
-  SET (INFO_FILE testfiles/h5repack.info)
-
-  SET (FILE0 h5repack_fill.h5)
-  SET (FILE1 h5repack_objs.h5)
-  SET (FILE2 h5repack_attr.h5)
-  SET (FILE3 h5repack_hlink.h5)
-  SET (FILE4 h5repack_layout.h5)
-  SET (FILE5 h5repack_early.h5)
-  SET (FILE7 h5repack_szip.h5)
-  SET (FILE8 h5repack_deflate.h5)
-  SET (FILE9 h5repack_shuffle.h5)
-  SET (FILE10 h5repack_fletcher.h5)
-  SET (FILE11 h5repack_filters.h5)
-  SET (FILE12 h5repack_nbit.h5)
-  SET (FILE13 h5repack_soffset.h5)
-  SET (FILE14 h5repack_layouto.h5 )     # A file with an older version of the layout message (copy of test/tlayouto.h5)
-  SET (FILE15 h5repack_named_dtypes.h5)
-  SET (FILE16 tfamily%05d.h5)           # located in common testfiles folder
-  SET (FILE18 h5repack_layout2.h5)
-  SET (FILE_REF h5repack_refs.h5)
-  SET (FILE_ATTR_REF h5repack_attr_refs.h5)
 
   ADD_TEST (NAME H5REPACK-testh5repack_detect_szip COMMAND $<TARGET_FILE:testh5repack_detect_szip>)
   IF (HDF5_ENABLE_SZIP_SUPPORT)
@@ -438,15 +526,10 @@ IF (BUILD_TESTING)
     SET (passRegex "no")
     SET_TESTS_PROPERTIES (H5REPACK-testh5repack_detect_szip PROPERTIES PASS_REGULAR_EXPRESSION "no")
   ENDIF (HDF5_ENABLE_SZIP_SUPPORT)
-  IF (NOT "${last_test}" STREQUAL "")
-    SET_TESTS_PROPERTIES (H5REPACK-testh5repack_detect_szip PROPERTIES DEPENDS ${last_test})
-  ENDIF (NOT "${last_test}" STREQUAL "")
-  SET (last_test "H5REPACK-testh5repack_detect_szip")
+  SET_TESTS_PROPERTIES (H5REPACK-testh5repack_detect_szip PROPERTIES DEPENDS H5REPACK-clearall-objects)
 
   ADD_TEST (NAME H5REPACK-h5repacktest COMMAND $<TARGET_FILE:h5repacktest>)
-  IF (NOT "${last_test}" STREQUAL "")
-    SET_TESTS_PROPERTIES (H5REPACK-h5repacktest PROPERTIES DEPENDS ${last_test})
-  ENDIF (NOT "${last_test}" STREQUAL "")
+  SET_TESTS_PROPERTIES (H5REPACK-h5repacktest PROPERTIES DEPENDS H5REPACK-testh5repack_detect_szip)
   SET (last_test "H5REPACK-h5repacktest")
 
 #
@@ -740,47 +823,29 @@ IF (BUILD_TESTING)
 #########################################################
 # layout options (these files have no filters)
 #########################################################
-  ADD_H5_TEST (dset2_chunk_20x10 "TEST" ${FILE4} --layout=dset2:CHUNK=20x10)
-  ADD_H5_VERIFY_TEST (dset2_chunk_20x10 "TEST" 0 ${FILE4} dset2 CHUNKED)
-  ADD_H5_TEST (chunk_20x10 "TEST" ${FILE4} -l CHUNK=20x10)
-  ADD_H5_VERIFY_TEST (chunk_20x10 "TEST" 1 ${FILE4} null CHUNKED)
-  ADD_H5_TEST (dset2_conti "TEST" ${FILE4} -l dset2:CONTI)
-  ADD_H5_VERIFY_TEST (dset2_conti "TEST" 0 ${FILE4} dset2 CONTIGUOUS)
-  ADD_H5_TEST (conti "TEST" ${FILE4} -l CONTI)
-  ADD_H5_VERIFY_TEST (conti "TEST" 1 ${FILE4} null CONTIGUOUS)
-  ADD_H5_TEST (dset2_compa "TEST" ${FILE4} -l dset2:COMPA)
-  ADD_H5_VERIFY_TEST (dset2_compa "TEST" 0 ${FILE4} dset2 COMPACT)
-  ADD_H5_TEST (compa "TEST" ${FILE4} -l COMPA)
-  ADD_H5_VERIFY_TEST (compa "TEST" 1 ${FILE4} null COMPACT)
+  ADD_H5_VERIFY_TEST (dset2_chunk_20x10 "TEST" 0 ${FILE4} dset2 CHUNKED --layout=dset2:CHUNK=20x10)
+  ADD_H5_VERIFY_TEST (chunk_20x10 "TEST" 1 ${FILE4} null CHUNKED -l CHUNK=20x10)
+  ADD_H5_VERIFY_TEST (dset2_conti "TEST" 0 ${FILE4} dset2 CONTIGUOUS -l dset2:CONTI)
+  ADD_H5_VERIFY_TEST (conti "TEST" 1 ${FILE4} null CONTIGUOUS -l CONTI)
+  ADD_H5_VERIFY_TEST (dset2_compa "TEST" 0 ${FILE4} dset2 COMPACT -l dset2:COMPA)
+  ADD_H5_VERIFY_TEST (compa "TEST" 1 ${FILE4} null COMPACT -l COMPA)
 
 ################################################################
 # layout conversions (file has no filters)
 ###############################################################
-  ADD_H5_TEST (dset_compa_conti "TEST" ${FILE4} -l dset_compact:CONTI)
-  ADD_H5_VERIFY_TEST (dset_compa_conti "TEST" 0 ${FILE4} dset_compact CONTIGUOUS)
-  ADD_H5_TEST (dset_compa_chunk "TEST" ${FILE4} -l dset_compact:CHUNK=2x5)
-  ADD_H5_VERIFY_TEST (dset_compa_chunk "TEST" 0 ${FILE4} dset_compact CHUNKED)
-  ADD_H5_TEST (dset_compa_compa "TEST" ${FILE4} -l dset_compact:COMPA)
-  ADD_H5_VERIFY_TEST (dset_compa_compa "TEST" 0 ${FILE4} dset_compact COMPACT)
-  ADD_H5_TEST (dset_conti_compa "TEST" ${FILE4} -l dset_contiguous:COMPA)
-  ADD_H5_VERIFY_TEST (dset_conti_compa "TEST" 0 ${FILE4} dset_contiguous COMPACT)
-  ADD_H5_TEST (dset_conti_chunk "TEST" ${FILE4} -l dset_contiguous:CHUNK=3x6)
-  ADD_H5_VERIFY_TEST (dset_conti_chunk "TEST" 0 ${FILE4} dset_contiguous CHUNKED)
-  ADD_H5_TEST (dset_conti_conti "TEST" ${FILE4} -l dset_contiguous:CONTI)
-  ADD_H5_VERIFY_TEST (dset_conti_conti "TEST" 0 ${FILE4} dset_contiguous CONTIGUOUS)
-  ADD_H5_TEST (chunk_compa "TEST" ${FILE4} -l dset_chunk:COMPA)
-  ADD_H5_VERIFY_TEST (chunk_compa "TEST" 0 ${FILE4} dset_chunk COMPACT)
-  ADD_H5_TEST (chunk_conti "TEST" ${FILE4} -l dset_chunk:CONTI)
-  ADD_H5_VERIFY_TEST (chunk_conti "TEST" 0 ${FILE4} dset_chunk CONTIGUOUS)
-  ADD_H5_TEST (chunk_18x13 "TEST" ${FILE4} -l dset_chunk:CHUNK=18x13)
-  ADD_H5_VERIFY_TEST (chunk_18x13 "TEST" 0 ${FILE4} dset_chunk CHUNKED)
+  ADD_H5_VERIFY_TEST (dset_compa_conti "TEST" 0 ${FILE4} dset_compact CONTIGUOUS -l dset_compact:CONTI)
+  ADD_H5_VERIFY_TEST (dset_compa_chunk "TEST" 0 ${FILE4} dset_compact CHUNKED -l dset_compact:CHUNK=2x5)
+  ADD_H5_VERIFY_TEST (dset_compa_compa "TEST" 0 ${FILE4} dset_compact COMPACT -l dset_compact:COMPA)
+  ADD_H5_VERIFY_TEST (dset_conti_compa "TEST" 0 ${FILE4} dset_contiguous COMPACT -l dset_contiguous:COMPA)
+  ADD_H5_VERIFY_TEST (dset_conti_chunk "TEST" 0 ${FILE4} dset_contiguous CHUNKED -l dset_contiguous:CHUNK=3x6)
+  ADD_H5_VERIFY_TEST (dset_conti_conti "TEST" 0 ${FILE4} dset_contiguous CONTIGUOUS -l dset_contiguous:CONTI)
+  ADD_H5_VERIFY_TEST (chunk_compa "TEST" 0 ${FILE4} dset_chunk COMPACT -l dset_chunk:COMPA)
+  ADD_H5_VERIFY_TEST (chunk_conti "TEST" 0 ${FILE4} dset_chunk CONTIGUOUS -l dset_chunk:CONTI)
+  ADD_H5_VERIFY_TEST (chunk_18x13 "TEST" 0 ${FILE4} dset_chunk CHUNKED -l dset_chunk:CHUNK=18x13)
 
 # test convert small size dataset ( < 1k) to compact layout without -m
-  ADD_H5_TEST (contig_small_compa "TEST" ${FILE18} -l contig_small:COMPA)
-  ADD_H5_VERIFY_TEST (contig_small_compa "TEST" 0 ${FILE18} contig_small COMPACT)
-
-  ADD_H5_TEST (contig_small_fixed_compa "TEST" ${FILE18} -l chunked_small_fixed:COMPA)
-  ADD_H5_VERIFY_TEST (contig_small_fixed_compa "TEST" 0 ${FILE18} chunked_small_fixed COMPACT)
+  ADD_H5_VERIFY_TEST (contig_small_compa "TEST" 0 ${FILE18} contig_small COMPACT -l contig_small:COMPA)
+  ADD_H5_VERIFY_TEST (contig_small_fixed_compa "TEST" 0 ${FILE18} chunked_small_fixed COMPACT -l chunked_small_fixed:COMPA)
 
 #--------------------------------------------------------------------------- 
 # Test file contains chunked datasets (need multiple dsets) with 
@@ -788,17 +853,14 @@ IF (BUILD_TESTING)
 # Use first dset to test.
 #---------------------------------------------------------------------------
 # chunk to chunk - specify chunk dim bigger than any current dim
-ADD_H5_TEST (chunk2chunk "TEST" h5repack_layout3.h5 -l chunk_unlimit1:CHUNK=100x300)
-ADD_H5_VERIFY_TEST (chunk2chunk "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 CHUNK)
+ADD_H5_VERIFY_TEST (chunk2chunk "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 CHUNK -l chunk_unlimit1:CHUNK=100x300)
 
 # chunk to contiguous 
-ADD_H5_TEST (chunk2conti "TEST" h5repack_layout3.h5 -l chunk_unlimit1:CONTI)
-ADD_H5_VERIFY_TEST (chunk2conti "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 CONTI)
+ADD_H5_VERIFY_TEST (chunk2conti "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 CONTI -l chunk_unlimit1:CONTI)
 
 # chunk to compact - convert big dataset (should be > 64k) for this purpose, 
 # should remain as original layout (chunk)
-ADD_H5_TEST (chunk2compa "TEST" h5repack_layout3.h5 -l chunk_unlimit1:COMPA)
-ADD_H5_VERIFY_TEST (chunk2compa "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 CHUNK)
+ADD_H5_VERIFY_TEST (chunk2compa "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 CHUNK -l chunk_unlimit1:COMPA)
 
 #--------------------------------------------------------------------------
 # Test -f for some specific cases. Chunked dataset with unlimited max dims.
@@ -808,16 +870,13 @@ ADD_H5_VERIFY_TEST (chunk2compa "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 CHUN
 # - should not change max dims from unlimit
 
 # chunk dim is bigger than dataset dim. ( dset size < 64k )
-ADD_H5_TEST (error1 "TEST" h5repack_layout3.h5 -f chunk_unlimit1:NONE)
-ADD_H5_VERIFY_TEST (error1 "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 H5S_UNLIMITED)
+ADD_H5_VERIFY_TEST (error1 "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 H5S_UNLIMITED -f chunk_unlimit1:NONE)
 
 # chunk dim is bigger than dataset dim. ( dset size > 64k )
-ADD_H5_TEST (error2 "TEST" h5repack_layout3.h5 -f chunk_unlimit2:NONE)
-ADD_H5_VERIFY_TEST (error2 "TEST" 0 h5repack_layout3.h5 chunk_unlimit2 H5S_UNLIMITED)
+ADD_H5_VERIFY_TEST (error2 "TEST" 0 h5repack_layout3.h5 chunk_unlimit2 H5S_UNLIMITED -f chunk_unlimit2:NONE)
 
 # chunk dims are smaller than dataset dims. ( dset size < 64k )
-ADD_H5_TEST (error3 "TEST" h5repack_layout3.h5 -f chunk_unlimit3:NONE)
-ADD_H5_VERIFY_TEST (error3 "TEST" 0 h5repack_layout3.h5 chunk_unlimit3 H5S_UNLIMITED)
+ADD_H5_VERIFY_TEST (error3 "TEST" 0 h5repack_layout3.h5 chunk_unlimit3 H5S_UNLIMITED -f chunk_unlimit3:NONE)
 
 # file input - should not fail
 ADD_H5_TEST (error4 "TEST" h5repack_layout3.h5 -f NONE)
@@ -829,22 +888,20 @@ ADD_H5_TEST (error4 "TEST" h5repack_layout3.h5 -f NONE)
   ADD_H5_TEST (native_attr "TEST" ${FILE2} -n)
 
 # latest file format with long switches. use FILE4=h5repack_layout.h5 (no filters)
-  SET (arg ${FILE4} --layout CHUNK=20x10 --filter GZIP=1 --minimum=10 --native --latest --compact=8 --indexed=6 --ssize=8[:dtype])
+  SET (arg --layout CHUNK=20x10 --filter GZIP=1 --minimum=10 --native --latest --compact=8 --indexed=6 --ssize=8[:dtype])
   SET (TESTTYPE "TEST")
   IF (NOT USE_FILTER_DEFLATE)
     SET (TESTTYPE "SKIP")
   ENDIF (NOT USE_FILTER_DEFLATE)
-  ADD_H5_TEST (layout_long_switches ${TESTTYPE} ${arg})
-  ADD_H5_VERIFY_TEST (layout_long_switches ${TESTTYPE} 1 ${FILE4} null CHUNKED)
+  ADD_H5_VERIFY_TEST (layout_long_switches ${TESTTYPE} 1 ${FILE4} null CHUNKED ${arg})
 
 # latest file format with short switches. use FILE4=h5repack_layout.h5 (no filters)
-  SET (arg ${FILE4} -l CHUNK=20x10 -f GZIP=1 -m 10 -n -L -c 8 -d 6 -s 8[:dtype])
+  SET (arg -l CHUNK=20x10 -f GZIP=1 -m 10 -n -L -c 8 -d 6 -s 8[:dtype])
   SET (TESTTYPE "TEST")
   IF (NOT USE_FILTER_DEFLATE)
     SET (TESTTYPE "SKIP")
   ENDIF (NOT USE_FILTER_DEFLATE)
-  ADD_H5_TEST (layout_short_switches ${TESTTYPE} ${arg})
-  ADD_H5_VERIFY_TEST (layout_short_switches ${TESTTYPE} 1 ${FILE4} null CHUNKED)
+  ADD_H5_VERIFY_TEST (layout_short_switches ${TESTTYPE} 1 ${FILE4} null CHUNKED ${arg})
 
 # several global filters
   SET (arg ${FILE4} --filter GZIP=1 --filter SHUF)
diff --git a/tools/h5repack/Makefile.in b/tools/h5repack/Makefile.in
index 389339f..fe3a11c 100644
--- a/tools/h5repack/Makefile.in
+++ b/tools/h5repack/Makefile.in
@@ -248,6 +248,7 @@ H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
 HAVE_DMALLOC = @HAVE_DMALLOC@
 HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
 HDF5_HL = @HDF5_HL@
 HDF5_INTERFACES = @HDF5_INTERFACES@
 HDF_CXX = @HDF_CXX@
@@ -299,7 +300,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
 PATH_SEPARATOR = @PATH_SEPARATOR@
 PERL = @PERL@
-PTHREAD = @PTHREAD@
 RANLIB = @RANLIB@
 ROOT = @ROOT@
 RUNPARALLEL = @RUNPARALLEL@
diff --git a/tools/h5repack/h5repack.sh.in b/tools/h5repack/h5repack.sh.in
index a732ffb..dc90426 100644
--- a/tools/h5repack/h5repack.sh.in
+++ b/tools/h5repack/h5repack.sh.in
@@ -189,7 +189,9 @@ SKIP() {
 DIFFTEST() 
 {
     VERIFY h5diff output $@
-    $RUNSERIAL $H5DIFF_BIN -q  "$@" 
+    (
+        $RUNSERIAL $H5DIFF_BIN -q  "$@" 
+    )
     RET=$?
     if [ $RET != 0 ] ; then
          echo "*FAILED*"
@@ -208,44 +210,57 @@ DIFFTEST()
 TOOLTEST() 
 {
     echo $@
-    TOOLTEST_MAIN $@
-    outfile=$TESTDIR/out.$1
-    rm -f $outfile
-}
+    infile=$TESTDIR/$2
+    outfile=$TESTDIR/out-$1.$2
+    shift
+    shift
 
-# TOOLTEST main function, doesn't delete $output file
-TOOLTEST_MAIN() 
-{
     # Run test.
     TESTING $H5REPACK $@
-
-    infile=$TESTDIR/$1
-    outfile=$TESTDIR/out.$1
-    shift
-    $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile
+    (
+        $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile
+    )
     RET=$?
     if [ $RET != 0 ] ; then
-	echo "*FAILED*"
-	nerrors="`expr $nerrors + 1`"
+        echo "*FAILED*"
+        nerrors="`expr $nerrors + 1`"
     else
-	echo " PASSED"
-	DIFFTEST $infile $outfile
+        echo " PASSED"
+        DIFFTEST $infile $outfile
     fi
+    rm -f $outfile
 }
 
 #------------------------------------------
 # Verifying layouts of a dataset 
 VERIFY_LAYOUT_DSET()
 {
-    outfile=$TESTDIR/out.$1
-    layoutfile=$TESTDIR/layout.$1
-    dset=$2
-    expectlayout=$3
+    layoutfile=$TESTDIR/layout-$1.$2
+    dset=$3
+    expectlayout=$4
+    infile=$TESTDIR/$2
+    outfile=$TESTDIR/out-$1.$2
+    shift
+    shift
+    shift
+    shift
+    
+    $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile
+    RET=$?
+    if [ $RET != 0 ] ; then
+        echo "*FAILED*"
+        nerrors="`expr $nerrors + 1`"
+    else
+        echo " PASSED"
+        DIFFTEST $infile $outfile
+    fi
     
     #---------------------------------
     # check the layout from a dataset
     VERIFY  "a dataset layout"
-    $RUNSERIAL $H5DUMP_BIN -d $dset -pH $outfile > $layoutfile
+    (
+        $RUNSERIAL $H5DUMP_BIN -d $dset -pH $outfile > $layoutfile
+    )
     $GREP $expectlayout $layoutfile > /dev/null
     if [ $? -eq 0 ]; then
         echo " PASSED"
@@ -262,17 +277,35 @@ VERIFY_LAYOUT_DSET()
 # Verifying layouts from entire file
 VERIFY_LAYOUT_ALL()
 {
-    outfile=$TESTDIR/out.$1
-    layoutfile=$TESTDIR/layout.$1
-    expectlayout=$2
+    outfile=$TESTDIR/out-$1.$2
+    layoutfile=$TESTDIR/layout-$1.$2
+    expectlayout=$3
+    shift
+    shift
+    shift
+    
+    $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile
+    RET=$?
+    if [ $RET != 0 ] ; then
+        echo "*FAILED*"
+        nerrors="`expr $nerrors + 1`"
+    else
+        echo " PASSED"
+        DIFFTEST $infile $outfile
+    fi
+    
     
     #---------------------------------
     # check the layout from a dataset
     # check if the other layouts still exsit
     VERIFY  "layouts"
+    (
         # if CONTIGUOUS
         if [ $expectlayout = "CONTIGUOUS" ]; then
-            $RUNSERIAL $H5DUMP_BIN -pH $outfile > $layoutfile
+            TESTING $H5DUMP_BIN -pH $outfile
+            (
+                $RUNSERIAL $H5DUMP_BIN -pH $outfile > $layoutfile
+            )
             $GREP "COMPACT" $layoutfile  > /dev/null
             if [ $? -eq 0 ]; then
                 echo " FAILED"
@@ -287,7 +320,10 @@ VERIFY_LAYOUT_ALL()
         else    
             # if COMPACT
             if [ $expectlayout = "COMPACT" ]; then
-                $RUNSERIAL $H5DUMP_BIN -pH $outfile > $layoutfile
+                TESTING $H5DUMP_BIN -pH $outfile
+                (
+                    $RUNSERIAL $H5DUMP_BIN -pH $outfile > $layoutfile
+                )
                 $GREP "CHUNKED" $layoutfile  > /dev/null
                 if [ $? -eq 0 ]; then
                     echo " FAILED"
@@ -302,7 +338,10 @@ VERIFY_LAYOUT_ALL()
             else
                 # if CHUNKED
                 if [ $expectlayout = "CHUNKED" ]; then
-                    $RUNSERIAL $H5DUMP_BIN -pH $outfile > $layoutfile
+                    TESTING $H5DUMP_BIN -pH $outfile
+                    (
+                        $RUNSERIAL $H5DUMP_BIN -pH $outfile > $layoutfile
+                    )
                     $GREP "CONTIGUOUS" $layoutfile  > /dev/null
                     if [ $? -eq 0 ]; then
                         echo " FAILED"
@@ -317,6 +356,7 @@ VERIFY_LAYOUT_ALL()
                 fi
            fi
         fi
+    )
 
     # clean up tmp files
     rm -f $outfile
@@ -327,13 +367,16 @@ VERIFY_LAYOUT_ALL()
 #
 TOOLTEST0() 
 {
+    infile=$TESTDIR/$2
+    outfile=$TESTDIR/out-$1.$2
+    shift
+    shift
+
     # Run test.
     TESTING $H5REPACK $@
-
-    infile=$TESTDIR/$1
-    outfile=$TESTDIR/out.$1
-    shift
-    $RUNSERIAL $H5REPACK_BIN -i $infile -o $outfile "$@"
+    (
+        $RUNSERIAL $H5REPACK_BIN -i $infile -o $outfile "$@"
+    )
     RET=$?
     if [ $RET != 0 ] ; then
         echo "*FAILED*"
@@ -351,13 +394,16 @@ TOOLTEST0()
 #
 TOOLTEST1() 
 {
+    infile=$TESTDIR/$2
+    outfile=$TESTDIR/out-$1.$2
+    shift
+    shift
+
     # Run test.
     TESTING $H5REPACK $@
-
-    infile=$TESTDIR/$1
-    outfile=$TESTDIR/out.$1
-    shift
-    $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile
+    (
+        $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile
+    )
     RET=$?
     if [ $RET != 0 ] ; then
 	echo "*FAILED*"
@@ -374,16 +420,20 @@ TOOLTEST1()
 #
 TOOLTESTV() 
 {
-    # Run test.
-    TESTING $H5REPACK $@
-    expect="$TESTDIR/$1.ddl"
-    actual="$TESTDIR/`basename $1 .ddl`.out"
-    actual_err="$TESTDIR/`basename $1 .ddl`.err"
+    expect="$TESTDIR/$2.ddl"
+    actual="$TESTDIR/`basename $2 .ddl`.out"
+    actual_err="$TESTDIR/`basename $2 .ddl`.err"
 
-    infile=$TESTDIR/$1
-    outfile=$TESTDIR/out.$1
+    infile=$TESTDIR/$2
+    outfile=$TESTDIR/out-$1.$2
+    shift
     shift
-    $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile >$actual 2>$actual_err
+    
+    # Run test.
+    TESTING $H5REPACK $@
+    (
+        $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile
+    ) >$actual 2>$actual_err
     RET=$?
     if [ $RET != 0 ] ; then
 	echo "*FAILED*"
@@ -427,17 +477,41 @@ TOOLTESTV()
 # Verify the output file of second run is larger than the one of 1st run.
 TOOLTEST_META()
 {
-    input_file=$1
-    outfile="$TESTDIR/out.$1"
+    infile=$TESTDIR/$2
+    outfile=$TESTDIR/out-$1.$2
+    shift
+    shift
 
-    # Use TOOLTEST_MAIN to run because it does not remove the output file.
-    # 1st run, without metadata option
-    TOOLTEST_MAIN $1
+    # Run test.
+    TESTING $H5REPACK $@
+    (
+        $RUNSERIAL $H5REPACK_BIN $infile $outfile
+    )
+    RET=$?
+    if [ $RET != 0 ] ; then
+        echo "*FAILED*"
+        nerrors="`expr $nerrors + 1`"
+    else
+        echo " PASSED"
+        DIFFTEST $infile $outfile
+    fi
     # get the size of the first output file
     size1=`wc -c $outfile | cut -d' ' -f1`
 
     # 2nd run with metadata option
-    TOOLTEST_MAIN $*
+    # Run test.
+    TESTING $H5REPACK $@
+    (
+        $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile
+    )
+    RET=$?
+    if [ $RET != 0 ] ; then
+        echo "*FAILED*"
+        nerrors="`expr $nerrors + 1`"
+    else
+        echo " PASSED"
+        DIFFTEST $infile $outfile
+    fi
     # get the size of the second output file
     size2=`wc -c $outfile | cut -d' ' -f1`
 
@@ -492,12 +566,12 @@ fi
 COPY_TESTFILES_TO_TESTDIR
 
 # copy files (these files have no filters) 
-TOOLTEST h5repack_fill.h5
-TOOLTEST h5repack_objs.h5
-TOOLTEST h5repack_attr.h5
-TOOLTEST h5repack_hlink.h5
-TOOLTEST h5repack_layout.h5
-TOOLTEST h5repack_early.h5
+TOOLTEST fill h5repack_fill.h5
+TOOLTEST objs h5repack_objs.h5
+TOOLTEST attr h5repack_attr.h5
+TOOLTEST hlink h5repack_hlink.h5
+TOOLTEST layout h5repack_layout.h5
+TOOLTEST early h5repack_early.h5
 
 
 # use h5repack_layout.h5 to write some filters  (this file has  no filters)
@@ -507,7 +581,7 @@ arg="h5repack_layout.h5 -f dset1:GZIP=1  -l dset1:CHUNK=20x10"
 if test  $USE_FILTER_DEFLATE != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST gzip_individual $arg
 fi
   
 # gzip for all 
@@ -515,7 +589,7 @@ arg="h5repack_layout.h5 -f GZIP=1"
 if test  $USE_FILTER_DEFLATE != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST gzip_all $arg
 fi
 
 # szip with individual object
@@ -523,7 +597,7 @@ arg="h5repack_layout.h5 -f dset2:SZIP=8,EC  -l dset2:CHUNK=20x10"
 if test $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SZIP != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg 
+ TOOLTEST szip_individual $arg 
 fi
 
 # szip for all
@@ -531,7 +605,7 @@ arg="h5repack_layout.h5 -f SZIP=8,NN"
 if test $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SZIP != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg 
+ TOOLTEST szip_all $arg 
 fi
 
 # shuffle with individual object
@@ -539,7 +613,7 @@ arg="h5repack_layout.h5 -f dset2:SHUF  -l dset2:CHUNK=20x10"
 if test $USE_FILTER_SHUFFLE != "yes"  ; then
  SKIP $arg
 else
- TOOLTEST $arg 
+ TOOLTEST shuffle_individual $arg 
 fi
   
 
@@ -548,7 +622,7 @@ arg="h5repack_layout.h5 -f SHUF"
 if test $USE_FILTER_SHUFFLE != "yes"  ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST shuffle_all $arg
 fi
   
 # fletcher32  with individual object
@@ -556,7 +630,7 @@ arg="h5repack_layout.h5 -f dset2:FLET  -l dset2:CHUNK=20x10"
 if test $USE_FILTER_FLETCHER32 != "yes"  ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST fletcher_individual $arg
 fi
 
 # fletcher32 for all
@@ -564,7 +638,7 @@ arg="h5repack_layout.h5 -f FLET"
 if test $USE_FILTER_FLETCHER32 != "yes"  ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST fletcher_all $arg
 fi
 
 # all filters
@@ -572,7 +646,7 @@ arg="h5repack_layout.h5 -f dset2:SHUF -f dset2:FLET -f dset2:SZIP=8,NN -f dset2:
 if test $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SZIP != "yes" -o $USE_FILTER_SHUFFLE != "yes" -o $USE_FILTER_FLETCHER32 != "yes" -o $USE_FILTER_DEFLATE != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST all_filters $arg
 fi
 
 # verbose gzip with individual object
@@ -581,7 +655,7 @@ if test  $USE_FILTER_DEFLATE != "yes" ; then
  SKIP $arg
 else
  # compare output
- TOOLTESTV $arg
+ TOOLTESTV gzip_verbose_filters $arg
 fi
   
 ###########################################################
@@ -593,7 +667,7 @@ arg="h5repack_szip.h5"
 if test $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SZIP != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST szip_copy $arg
 fi
   
 # szip remove
@@ -601,7 +675,7 @@ arg="h5repack_szip.h5 --filter=dset_szip:NONE"
 if test $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SZIP != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST szip_remove $arg
 fi
   
 # deflate copy
@@ -609,7 +683,7 @@ arg="h5repack_deflate.h5"
 if test $USE_FILTER_DEFLATE != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST deflate_copy $arg
 fi
 
 # deflate remove
@@ -617,7 +691,7 @@ arg="h5repack_deflate.h5 -f dset_deflate:NONE"
 if test $USE_FILTER_DEFLATE != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST deflate_remove $arg
 fi
     
 # shuffle copy
@@ -625,7 +699,7 @@ arg="h5repack_shuffle.h5"
 if test $USE_FILTER_SHUFFLE != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST shuffle_copy $arg
 fi
 
 # shuffle remove
@@ -633,7 +707,7 @@ arg="h5repack_shuffle.h5 -f dset_shuffle:NONE"
 if test $USE_FILTER_SHUFFLE != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST shuffle_remove $arg
 fi
 
 # fletcher32 copy
@@ -641,7 +715,7 @@ arg="h5repack_fletcher.h5"
 if test $USE_FILTER_FLETCHER32 != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST fletcher_copy $arg
 fi
 
 # fletcher32 remove
@@ -649,7 +723,7 @@ arg="h5repack_fletcher.h5 -f dset_fletcher32:NONE"
 if test $USE_FILTER_FLETCHER32 != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST fletcher_remove $arg
 fi        
 
 # nbit copy
@@ -657,7 +731,7 @@ arg="h5repack_nbit.h5"
 if test $USE_FILTER_NBIT != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST nbit_copy $arg
 fi
 
 # nbit remove
@@ -665,7 +739,7 @@ arg="h5repack_nbit.h5 -f dset_nbit:NONE"
 if test $USE_FILTER_NBIT != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST nbit_remove $arg
 fi        
 
 # nbit add
@@ -673,7 +747,7 @@ arg="h5repack_nbit.h5 -f dset_int31:NBIT"
 if test $USE_FILTER_NBIT != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST nbit_add $arg
 fi
 
 # scaleoffset copy
@@ -681,7 +755,7 @@ arg="h5repack_soffset.h5"
 if test $USE_FILTER_SCALEOFFSET != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST scale_copy $arg
 fi
 
 # scaleoffset add
@@ -689,7 +763,7 @@ arg="h5repack_soffset.h5 -f dset_none:SOFF=31,IN"
 if test $USE_FILTER_SCALEOFFSET != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST scale_add $arg
 fi
 
 # scaleoffset remove
@@ -697,7 +771,7 @@ arg="h5repack_soffset.h5 -f dset_scaleoffset:NONE"
 if test $USE_FILTER_SCALEOFFSET != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST scale_remove $arg
 fi        
 
 # remove all  filters
@@ -705,7 +779,7 @@ arg="h5repack_filters.h5 -f NONE"
 if test $USE_FILTER_FLETCHER32 != "yes" -o $USE_FILTER_DEFLATE != "yes" -o $USE_FILTER_SZIP != "yes" -o $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SHUFFLE != "yes"  -o $USE_FILTER_NBIT != "yes"  -o $USE_FILTER_SCALEOFFSET != "yes"  ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST remove_all $arg
 fi
 
 #filter conversions
@@ -714,14 +788,14 @@ arg="h5repack_deflate.h5 -f dset_deflate:SZIP=8,NN"
 if test $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SZIP != "yes" -o $USE_FILTER_DEFLATE != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg 
+ TOOLTEST deflate_convert $arg 
 fi
 
 arg="h5repack_szip.h5 -f dset_szip:GZIP=1"
 if test $USE_FILTER_SZIP != "yes" -o $USE_FILTER_SZIP_ENCODER != "yes"  -o $USE_FILTER_DEFLATE != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg 
+ TOOLTEST szip_convert $arg 
 fi
 
 
@@ -730,7 +804,7 @@ arg="h5repack_layout.h5 -f GZIP=1 -m 1024"
 if test $USE_FILTER_DEFLATE != "yes"  ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST deflate_limit $arg
 fi
 
 #file
@@ -738,67 +812,50 @@ arg="h5repack_layout.h5 -e $TESTDIR/h5repack.info"
 if test $USE_FILTER_DEFLATE != "yes" ; then
  SKIP $arg 
 else
- TOOLTEST $arg 
+ TOOLTEST deflate_file $arg 
 fi
 
 #########################################################
 # layout options (these files have no filters)
 #########################################################
-TOOLTEST_MAIN h5repack_layout.h5 --layout dset2:CHUNK=20x10
-VERIFY_LAYOUT_DSET h5repack_layout.h5 dset2 CHUNKED
+VERIFY_LAYOUT_DSET dset2_chunk_20x10 h5repack_layout.h5 dset2 CHUNKED --layout dset2:CHUNK=20x10
 
-TOOLTEST_MAIN h5repack_layout.h5 -l CHUNK=20x10
-VERIFY_LAYOUT_ALL h5repack_layout.h5 CHUNKED
+VERIFY_LAYOUT_ALL chunk_20x10 h5repack_layout.h5 CHUNKED -l CHUNK=20x10
 
-TOOLTEST_MAIN h5repack_layout.h5 -l dset2:CONTI
-VERIFY_LAYOUT_DSET h5repack_layout.h5 dset2 CONTIGUOUS
+VERIFY_LAYOUT_DSET dset2_conti h5repack_layout.h5 dset2 CONTIGUOUS -l dset2:CONTI
 
-TOOLTEST_MAIN h5repack_layout.h5 -l CONTI
-VERIFY_LAYOUT_ALL h5repack_layout.h5 CONTIGUOUS
+VERIFY_LAYOUT_ALL conti h5repack_layout.h5 CONTIGUOUS -l CONTI
 
-TOOLTEST_MAIN h5repack_layout.h5 -l dset2:COMPA
-VERIFY_LAYOUT_DSET h5repack_layout.h5 dset2 COMPACT
+VERIFY_LAYOUT_DSET dset2_compa h5repack_layout.h5 dset2 COMPACT -l dset2:COMPA
 
-TOOLTEST_MAIN h5repack_layout.h5 -l COMPA
-VERIFY_LAYOUT_ALL h5repack_layout.h5 COMPACT
+VERIFY_LAYOUT_ALL compa h5repack_layout.h5 COMPACT -l COMPA
 
 ################################################################
 # layout conversions (file has no filters)
 ###############################################################
 
-TOOLTEST_MAIN h5repack_layout.h5 -l dset_compact:CONTI
-VERIFY_LAYOUT_DSET h5repack_layout.h5 dset_compact CONTIGUOUS
+VERIFY_LAYOUT_DSET dset_compa_conti h5repack_layout.h5 dset_compact CONTIGUOUS -l dset_compact:CONTI
 
-TOOLTEST_MAIN h5repack_layout.h5 -l dset_compact:CHUNK=2x5
-VERIFY_LAYOUT_DSET h5repack_layout.h5 dset_compact CHUNKED
+VERIFY_LAYOUT_DSET dset_compa_chunk h5repack_layout.h5 dset_compact CHUNKED -l dset_compact:CHUNK=2x5
 
-TOOLTEST_MAIN h5repack_layout.h5 -l dset_compact:COMPA
-VERIFY_LAYOUT_DSET h5repack_layout.h5 dset_compact COMPACT
+VERIFY_LAYOUT_DSET dset_compa_compa h5repack_layout.h5 dset_compact COMPACT -l dset_compact:COMPA
 
-TOOLTEST_MAIN h5repack_layout.h5 -l dset_contiguous:COMPA
-VERIFY_LAYOUT_DSET h5repack_layout.h5 dset_contiguous COMPACT
+VERIFY_LAYOUT_DSET dset_conti_compa h5repack_layout.h5 dset_contiguous COMPACT -l dset_contiguous:COMPA
 
-TOOLTEST_MAIN h5repack_layout.h5 -l dset_contiguous:CHUNK=3x6
-VERIFY_LAYOUT_DSET h5repack_layout.h5 dset_contiguous CHUNKED
+VERIFY_LAYOUT_DSET dset_conti_chunk h5repack_layout.h5 dset_contiguous CHUNKED -l dset_contiguous:CHUNK=3x6
 
-TOOLTEST_MAIN h5repack_layout.h5 -l dset_contiguous:CONTI
-VERIFY_LAYOUT_DSET h5repack_layout.h5 dset_contiguous CONTIGUOUS
+VERIFY_LAYOUT_DSET dset_conti_conti h5repack_layout.h5 dset_contiguous CONTIGUOUS -l dset_contiguous:CONTI
 
-TOOLTEST_MAIN h5repack_layout.h5 -l dset_chunk:COMPA
-VERIFY_LAYOUT_DSET h5repack_layout.h5 dset_chunk COMPACT
+VERIFY_LAYOUT_DSET chunk_compa h5repack_layout.h5 dset_chunk COMPACT -l dset_chunk:COMPA
 
-TOOLTEST_MAIN h5repack_layout.h5 -l dset_chunk:CONTI
-VERIFY_LAYOUT_DSET h5repack_layout.h5 dset_chunk CONTIGUOUS
+VERIFY_LAYOUT_DSET chunk_conti h5repack_layout.h5 dset_chunk CONTIGUOUS -l dset_chunk:CONTI
 
-TOOLTEST_MAIN h5repack_layout.h5 -l dset_chunk:CHUNK=18x13
-VERIFY_LAYOUT_DSET h5repack_layout.h5 dset_chunk CHUNKED
+VERIFY_LAYOUT_DSET chunk_18x13 h5repack_layout.h5 dset_chunk CHUNKED -l dset_chunk:CHUNK=18x13
 
 # test convert small size dataset ( < 1k) to compact layout without -m
-TOOLTEST_MAIN h5repack_layout2.h5 -l contig_small:COMPA
-VERIFY_LAYOUT_DSET h5repack_layout2.h5 contig_small COMPACT
+VERIFY_LAYOUT_DSET contig_small_compa h5repack_layout2.h5 contig_small COMPACT -l contig_small:COMPA
 
-TOOLTEST_MAIN h5repack_layout2.h5 -l chunked_small_fixed:COMPA
-VERIFY_LAYOUT_DSET h5repack_layout2.h5 chunked_small_fixed COMPACT
+VERIFY_LAYOUT_DSET contig_small_fixed_compa h5repack_layout2.h5 chunked_small_fixed COMPACT -l chunked_small_fixed:COMPA
 
 #--------------------------------------------------------------------------- 
 # Test file contains chunked datasets (need multiple dsets) with 
@@ -806,17 +863,14 @@ VERIFY_LAYOUT_DSET h5repack_layout2.h5 chunked_small_fixed COMPACT
 # Use first dset to test.
 #---------------------------------------------------------------------------
 # chunk to chunk - specify chunk dim bigger than any current dim
-TOOLTEST_MAIN h5repack_layout3.h5 -l chunk_unlimit1:CHUNK=100x300
-VERIFY_LAYOUT_DSET h5repack_layout3.h5 chunk_unlimit1 CHUNK
+VERIFY_LAYOUT_DSET chunk2chunk h5repack_layout3.h5 chunk_unlimit1 CHUNK -l chunk_unlimit1:CHUNK=100x300
 
 # chunk to contiguous 
-TOOLTEST_MAIN h5repack_layout3.h5 -l chunk_unlimit1:CONTI
-VERIFY_LAYOUT_DSET h5repack_layout3.h5 chunk_unlimit1 CONTI
+VERIFY_LAYOUT_DSET chunk2conti h5repack_layout3.h5 chunk_unlimit1 CONTI -l chunk_unlimit1:CONTI
 
 # chunk to compact - convert big dataset (should be > 64k) for this purpose, 
 # should remain as original layout (chunk)
-TOOLTEST_MAIN h5repack_layout3.h5 -l chunk_unlimit1:COMPA
-VERIFY_LAYOUT_DSET h5repack_layout3.h5 chunk_unlimit1 CHUNK
+VERIFY_LAYOUT_DSET chunk2compa h5repack_layout3.h5 chunk_unlimit1 CHUNK -l chunk_unlimit1:COMPA
 
 #--------------------------------------------------------------------------
 # Test -f for some specific cases. Chunked dataset with unlimited max dims.
@@ -826,24 +880,22 @@ VERIFY_LAYOUT_DSET h5repack_layout3.h5 chunk_unlimit1 CHUNK
 # - should not change max dims from unlimit
 
 # chunk dim is bigger than dataset dim. ( dset size < 64k )
-TOOLTEST_MAIN h5repack_layout3.h5 -f chunk_unlimit1:NONE
-VERIFY_LAYOUT_DSET h5repack_layout3.h5 chunk_unlimit1 H5S_UNLIMITED
+VERIFY_LAYOUT_DSET error1 h5repack_layout3.h5 chunk_unlimit1 H5S_UNLIMITED -f chunk_unlimit1:NONE
 # chunk dim is bigger than dataset dim. ( dset size > 64k )
-TOOLTEST_MAIN h5repack_layout3.h5 -f chunk_unlimit2:NONE
-VERIFY_LAYOUT_DSET h5repack_layout3.h5 chunk_unlimit2 H5S_UNLIMITED
+VERIFY_LAYOUT_DSET error2 h5repack_layout3.h5 chunk_unlimit2 H5S_UNLIMITED -f chunk_unlimit2:NONE
 
 # chunk dims are smaller than dataset dims. ( dset size < 64k )
-TOOLTEST_MAIN h5repack_layout3.h5  -f chunk_unlimit3:NONE
-VERIFY_LAYOUT_DSET h5repack_layout3.h5 chunk_unlimit3 H5S_UNLIMITED
+#TOOLTEST_MAIN h5repack_layout3.h5  -f chunk_unlimit3:NONE
+VERIFY_LAYOUT_DSET error3 h5repack_layout3.h5 chunk_unlimit3 H5S_UNLIMITED -f chunk_unlimit3:NONE
 
 # file input - should not fail
-TOOLTEST h5repack_layout3.h5 -f NONE
+TOOLTEST error4 h5repack_layout3.h5 -f NONE
 
 # Native option
 # Do not use FILE1, as the named dtype will be converted to native, and h5diff will
 # report a difference.
-TOOLTEST h5repack_fill.h5 -n
-TOOLTEST h5repack_attr.h5 -n
+TOOLTEST native_fill h5repack_fill.h5 -n
+TOOLTEST native_attr h5repack_attr.h5 -n
 
 
 # latest file format with long switches. use FILE4=h5repack_layout.h5 (no filters)
@@ -851,8 +903,7 @@ arg="h5repack_layout.h5 --layout CHUNK=20x10 --filter GZIP=1 --minimum=10 --nati
 if test $USE_FILTER_DEFLATE != "yes" ; then
  SKIP $arg
 else
- TOOLTEST_MAIN $arg
- VERIFY_LAYOUT_ALL h5repack_layout.h5 CHUNKED
+ VERIFY_LAYOUT_ALL layout_long_switches h5repack_layout.h5 CHUNKED --layout CHUNK=20x10 --filter GZIP=1 --minimum=10 --native --latest --compact=8 --indexed=6 --ssize=8[:dtype]
 fi
 
 # latest file format with short switches. use FILE4=h5repack_layout.h5 (no filters)
@@ -860,8 +911,7 @@ arg="h5repack_layout.h5 -l CHUNK=20x10 -f GZIP=1 -m 10 -n -L -c 8 -d 6 -s 8[:dty
 if test $USE_FILTER_DEFLATE != "yes" ; then
  SKIP $arg
 else
- TOOLTEST_MAIN $arg
- VERIFY_LAYOUT_ALL h5repack_layout.h5 CHUNKED
+ VERIFY_LAYOUT_ALL layout_short_switches h5repack_layout.h5 CHUNKED -l CHUNK=20x10 -f GZIP=1 -m 10 -n -L -c 8 -d 6 -s 8[:dtype]
 fi
 
 # several global filters
@@ -870,7 +920,7 @@ arg="h5repack_layout.h5 --filter GZIP=1 --filter SHUF"
 if test $USE_FILTER_DEFLATE != "yes" -o $USE_FILTER_SHUFFLE != "yes" ; then
  SKIP $arg
 else
- TOOLTEST $arg
+ TOOLTEST global_filters $arg
 fi
 
 # syntax of -i infile -o outfile
@@ -879,46 +929,47 @@ arg="h5repack_layout.h5 -l CHUNK=20x10 -f GZIP=1 -m 10 -n -L -c 8 -d 6 -s 8[:dty
 if test $USE_FILTER_DEFLATE != "yes" ; then
  SKIP $arg
 else
- TOOLTEST0 $arg
+ TOOLTEST0 old_style_layout_short_switches $arg
 fi 
 
 # add a userblock to file
-arg="h5repack_objs.h5 -u ublock.bin -b 2048"
-TOOLTEST $arg
+arg="h5repack_objs.h5 -u $TESTDIR/ublock.bin -b 2048"
+TOOLTEST add_userblock $arg
 
 # add alignment
 arg="h5repack_objs.h5 -t 1 -a 1 "
-TOOLTEST $arg
+TOOLTEST add_alignment $arg
 
 # Check repacking file with old version of layout message (should get upgraded
 #       to new version and be readable, etc.)
-TOOLTEST h5repack_layouto.h5
+TOOLTEST pgrade_layout h5repack_layouto.h5
 
 # test for datum size > H5TOOLS_MALLOCSIZE
-TOOLTEST h5repack_objs.h5 -f GZIP=1
+TOOLTEST gt_mallocsize h5repack_objs.h5 -f GZIP=1
 
 # Check repacking file with committed datatypes in odd configurations
-TOOLTEST h5repack_named_dtypes.h5
+TOOLTEST committed_dt h5repack_named_dtypes.h5
 
 # tests family driver (file is located in common testfiles folder, uses TOOLTEST1
-TOOLTEST1 tfamily%05d.h5
+TOOLTEST1 family tfamily%05d.h5
 
 # test various references (bug 1814 and 1726)
-TOOLTEST h5repack_refs.h5
+TOOLTEST bug1814 h5repack_refs.h5
 
 # test attribute with various references (bug1797 / HDFFV-5932)
 # the references in attribute of compund or vlen datatype 
-TOOLTEST h5repack_attr_refs.h5 
+TOOLTEST HDFFV-5932 h5repack_attr_refs.h5 
 
 # Add test for memory leak in attirbute. This test is verified by CTEST.   
 # 1. leak from vlen string  
 # 2. leak from compound type without reference member
 # (HDFFV-7840, )
 # Note: this test is experimental for sharing test file among tools
-TOOLTEST h5diff_attr1.h5
+TOOLTEST HDFFV-7840 h5diff_attr1.h5
 
 # tests for metadata block size option 
-TOOLTEST_META h5repack_layout.h5 --metadata_block_size=8192
+TOOLTEST_META meta_short h5repack_layout.h5 -M 8192
+TOOLTEST_META meta_long h5repack_layout.h5 --metadata_block_size=8192
 
 if test $nerrors -eq 0 ; then
     echo "All $TESTNAME tests passed."
diff --git a/tools/h5stat/CMakeLists.txt b/tools/h5stat/CMakeLists.txt
index 9afb365..447df70 100644
--- a/tools/h5stat/CMakeLists.txt
+++ b/tools/h5stat/CMakeLists.txt
@@ -99,10 +99,9 @@ IF (BUILD_TESTING)
       IF (NOT "${last_test}" STREQUAL "")
         SET_TESTS_PROPERTIES (H5STAT-${resultfile} PROPERTIES DEPENDS ${last_test})
       ENDIF (NOT "${last_test}" STREQUAL "")
-    SET (last_test "H5STAT-${resultfile}")
     ELSE (HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
-          NAME H5STAT-clear-${resultfile}-objects
+          NAME H5STAT-${resultfile}-clear-objects
           COMMAND    ${CMAKE_COMMAND}
               -E remove ${resultfile}.out ${resultfile}.out.err
       )
@@ -117,7 +116,7 @@ IF (BUILD_TESTING)
               -D "TEST_REFERENCE=${resultfile}.ddl"
               -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
       )
-      SET_TESTS_PROPERTIES (H5STAT-${resultfile} PROPERTIES DEPENDS "H5STAT-clear-${resultfile}-objects")
+      SET_TESTS_PROPERTIES (H5STAT-${resultfile} PROPERTIES DEPENDS "H5STAT-${resultfile}-clear-objects")
     ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
   ENDMACRO (ADD_H5_TEST file)
 
diff --git a/tools/h5stat/Makefile.in b/tools/h5stat/Makefile.in
index 389e460..ec77732 100644
--- a/tools/h5stat/Makefile.in
+++ b/tools/h5stat/Makefile.in
@@ -263,6 +263,7 @@ H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
 HAVE_DMALLOC = @HAVE_DMALLOC@
 HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
 HDF5_HL = @HDF5_HL@
 HDF5_INTERFACES = @HDF5_INTERFACES@
 HDF_CXX = @HDF_CXX@
@@ -314,7 +315,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
 PATH_SEPARATOR = @PATH_SEPARATOR@
 PERL = @PERL@
-PTHREAD = @PTHREAD@
 RANLIB = @RANLIB@
 ROOT = @ROOT@
 RUNPARALLEL = @RUNPARALLEL@
diff --git a/tools/lib/Makefile.in b/tools/lib/Makefile.in
index 6a76e1d..743e158 100644
--- a/tools/lib/Makefile.in
+++ b/tools/lib/Makefile.in
@@ -226,6 +226,7 @@ H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
 HAVE_DMALLOC = @HAVE_DMALLOC@
 HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
 HDF5_HL = @HDF5_HL@
 HDF5_INTERFACES = @HDF5_INTERFACES@
 HDF_CXX = @HDF_CXX@
@@ -277,7 +278,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
 PATH_SEPARATOR = @PATH_SEPARATOR@
 PERL = @PERL@
-PTHREAD = @PTHREAD@
 RANLIB = @RANLIB@
 ROOT = @ROOT@
 RUNPARALLEL = @RUNPARALLEL@
diff --git a/tools/lib/h5diff_attr.c b/tools/lib/h5diff_attr.c
index 130a0d8..4899200 100644
--- a/tools/lib/h5diff_attr.c
+++ b/tools/lib/h5diff_attr.c
@@ -350,6 +350,13 @@ hsize_t diff_attr(hid_t loc1_id,
     if( build_match_list_attrs(loc1_id, loc2_id, &match_list_attrs, options) < 0)
         goto error;
 
+    /* if detect any unique extra attr */
+    if(match_list_attrs->nattrs_only1 || match_list_attrs->nattrs_only2)
+    {
+        /* exit will be 1 */
+        options->contents = 0;
+    }
+
     for(u = 0; u < (unsigned)match_list_attrs->nattrs; u++)
     {
         if( (match_list_attrs->attrs[u].exist[0]) && (match_list_attrs->attrs[u].exist[1]) )
diff --git a/tools/lib/h5tools_dump.c b/tools/lib/h5tools_dump.c
index f83c664..dbb5f98 100644
--- a/tools/lib/h5tools_dump.c
+++ b/tools/lib/h5tools_dump.c
@@ -302,7 +302,7 @@ h5tools_dump_simple_data(FILE *stream, const h5tool_format_t *info, hid_t contai
          */
         curr_pos = ctx->sm_pos;
 
-        if (region_output && H5Tequal(type, H5T_STD_REF_DSETREG)) {
+        if (region_output && (size == H5R_DSET_REG_REF_BUF_SIZE)) {
             for (i = 0; i < nelmts; i++, ctx->cur_elmt++, elmt_counter++) {
                 void* memref = mem + i * size;
                 char ref_name[1024];
diff --git a/tools/lib/h5tools_str.c b/tools/lib/h5tools_str.c
index 1646351..e17ae89 100644
--- a/tools/lib/h5tools_str.c
+++ b/tools/lib/h5tools_str.c
@@ -685,7 +685,8 @@ char *
 h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t container,
                    hid_t type, void *vp, h5tools_context_t *ctx)
 {
-    size_t         n, offset, size=0, nelmts, start;
+    size_t         nsize, offset, size=0, nelmts, start;
+    H5T_sign_t     nsign;
     char          *name;
     unsigned char *ucp_vp = (unsigned char *)vp;
     char          *cp_vp = (char *)vp;
@@ -715,15 +716,16 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai
     /* Append value depending on data type */
     start = h5tools_str_len(str);
 
+    nsize = H5Tget_size(type);
+    nsign = H5Tget_sign(type);
     if (info->raw) {
         size_t i;
 
-        n = H5Tget_size(type);
-        if (1 == n) {
+        if (1 == nsize) {
             h5tools_str_append(str, OPT(info->fmt_raw, "0x%02x"), ucp_vp[0]);
         }
         else {
-            for (i = 0; i < n; i++) {
+            for (i = 0; i < nsize; i++) {
                 if (i)
                     h5tools_str_append(str, ":");
                 h5tools_str_append(str, OPT(info->fmt_raw, "%02x"), ucp_vp[i]);
@@ -735,20 +737,23 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai
             return NULL;
         switch (type_class) {
             case H5T_FLOAT:
-                if (H5Tequal(type, H5T_NATIVE_FLOAT)) {
+                if (sizeof(float) == nsize) {
+                    /* if (H5Tequal(type, H5T_NATIVE_FLOAT)) */
                     float tempfloat;
 
                     HDmemcpy(&tempfloat, vp, sizeof(float));
                     h5tools_str_append(str, OPT(info->fmt_float, "%g"), tempfloat);
                 }
-                else if (H5Tequal(type, H5T_NATIVE_DOUBLE)) {
+                else if (sizeof(double) == nsize) {
+                    /* if (H5Tequal(type, H5T_NATIVE_DOUBLE)) */
                     double tempdouble;
 
                     HDmemcpy(&tempdouble, vp, sizeof(double));
                     h5tools_str_append(str, OPT(info->fmt_double, "%g"), tempdouble);
 #if H5_SIZEOF_LONG_DOUBLE !=0
                 }
-                else if (H5Tequal(type, H5T_NATIVE_LDOUBLE)) {
+                else if (sizeof(long double) == nsize) {
+                    /* if (H5Tequal(type, H5T_NATIVE_LDOUBLE)) */
                     long double templdouble;
 
                     HDmemcpy(&templdouble, vp, sizeof(long double));
@@ -833,147 +838,140 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai
                 }
                 break;
             case H5T_INTEGER:
-                if (H5Tequal(type, H5T_NATIVE_INT)) {
-                    HDmemcpy(&tempint, vp, sizeof(int));
-                    if (packed_bits_num) {
-                        if (packed_data_offset >= 8 * sizeof(int))
-                            tempint = 0;
-                        else
-                            tempint = (tempint >> packed_data_offset) & packed_data_mask;
-                    }
-                    h5tools_str_append(str, OPT(info->fmt_int, "%d"), tempint);
-                }
-                else if (H5Tequal(type, H5T_NATIVE_UINT)) {
-                    HDmemcpy(&tempuint, vp, sizeof(unsigned int));
-                    if (packed_bits_num) {
-                        if (packed_data_offset >= 8 * sizeof(unsigned int))
-                            tempuint = 0;
-                        else
-                            tempuint = (tempuint >> packed_data_offset) & packed_data_mask;
-                    }
-                    h5tools_str_append(str, OPT(info->fmt_uint, "%u"), tempuint);
-                }
-                else if (info->ascii && (H5Tequal(type, H5T_NATIVE_SCHAR) || H5Tequal(type, H5T_NATIVE_UCHAR))) {
-                    h5tools_print_char(str, info, (char) (*ucp_vp));
-                }
-                else if (H5Tequal(type, H5T_NATIVE_SCHAR)) {
-                    signed char tempchar;
-                    HDmemcpy(&tempchar, cp_vp, sizeof(char));
-                    if (packed_bits_num) {
-                        if (packed_data_offset >= 8 * sizeof(char))
-                            tempchar = 0;
-                        else
-                            tempchar = (tempchar >> packed_data_offset) & packed_data_mask;
-                    }
-#ifdef H5_VMS
-                    h5tools_str_append(str, OPT(info->fmt_schar, "%hd"), tempchar);
-#else
-                    h5tools_str_append(str, OPT(info->fmt_schar, "%hhd"), tempchar);
-#endif      
-                }
-                else if (H5Tequal(type, H5T_NATIVE_UCHAR)) {
-                    unsigned char tempuchar;
-                    HDmemcpy(&tempuchar, ucp_vp, sizeof(unsigned char));
-                    if (packed_bits_num) {
-                        if (packed_data_offset >= 8 * sizeof(unsigned char))
-                            tempuchar = 0;
-                        else
-                            tempuchar = (tempuchar >> packed_data_offset) & packed_data_mask;
-                    }
-                    h5tools_str_append(str, OPT(info->fmt_uchar, "%u"), tempuchar);
-                }
-                else if (H5Tequal(type, H5T_NATIVE_SHORT)) {
-                    short tempshort;
-
-                    HDmemcpy(&tempshort, vp, sizeof(short));
-                    if (packed_bits_num) {
-                        if (packed_data_offset >= 8 * sizeof(short))
-                            tempshort = 0;
-                        else
-                            tempshort = (tempshort >> packed_data_offset) & packed_data_mask;
-                    }
-                    h5tools_str_append(str, OPT(info->fmt_short, "%d"), tempshort);
-                }
-                else if (H5Tequal(type, H5T_NATIVE_USHORT)) {
-                    unsigned short tempushort;
-
-                    HDmemcpy(&tempushort, vp, sizeof(unsigned short));
-                    if (packed_bits_num) {
-                        if (packed_data_offset >= 8 * sizeof(unsigned short))
-                            tempushort = 0;
-                        else
-                            tempushort = (tempushort >> packed_data_offset) & packed_data_mask;
-                    }
-                    h5tools_str_append(str, OPT(info->fmt_ushort, "%u"), tempushort);
-                }
-                else if (H5Tequal(type, H5T_NATIVE_LONG)) {
-                    HDmemcpy(&templong, vp, sizeof(long));
-                    if (packed_bits_num) {
-                        if (packed_data_offset >= 8 * sizeof(long))
-                            templong = 0;
-                        else
-                            templong = (templong >> packed_data_offset) & packed_data_mask;
+                if (sizeof(char) == nsize) {
+                    /* if ((H5Tequal(type, H5T_NATIVE_SCHAR) || H5Tequal(type, H5T_NATIVE_UCHAR))) */
+                    if (info->ascii) {
+                        h5tools_print_char(str, info, (char) (*ucp_vp));
                     }
-                    h5tools_str_append(str, OPT(info->fmt_long, "%ld"), templong);
-                }
-                else if (H5Tequal(type, H5T_NATIVE_ULONG)) {
-                    HDmemcpy(&tempulong, vp, sizeof(unsigned long));
-                    if (packed_bits_num) {
-                        if (packed_data_offset >= 8 * sizeof(unsigned long))
-                            tempulong = 0;
-                        else
-                            tempulong = (tempulong >> packed_data_offset) & packed_data_mask;
+                    else if(H5T_SGN_NONE == nsign) {
+                        /* if (H5Tequal(type, H5T_NATIVE_UCHAR)) */
+                        unsigned char tempuchar;
+                        HDmemcpy(&tempuchar, ucp_vp, sizeof(unsigned char));
+                        if (packed_bits_num) {
+                            if (packed_data_offset >= 8 * sizeof(unsigned char))
+                                tempuchar = 0;
+                            else
+                                tempuchar = (tempuchar >> packed_data_offset) & packed_data_mask;
+                        }
+                        h5tools_str_append(str, OPT(info->fmt_uchar, "%u"), tempuchar);
                     }
-                    h5tools_str_append(str, OPT(info->fmt_ulong, "%lu"), tempulong);
-                }
-                else if (H5Tequal(type, H5T_NATIVE_LLONG)) {
-                    HDmemcpy(&templlong, vp, sizeof(long long));
-                    if (packed_bits_num) {
-                        if (packed_data_offset >= 8 * sizeof(long long))
-                            templlong = 0;
-                        else
-                            templlong = (templlong >> packed_data_offset) & packed_data_mask;
+                    else {
+                        /* if (H5Tequal(type, H5T_NATIVE_SCHAR)) */
+                        signed char tempchar;
+                        HDmemcpy(&tempchar, cp_vp, sizeof(char));
+                        if (packed_bits_num) {
+                            if (packed_data_offset >= 8 * sizeof(char))
+                                tempchar = 0;
+                            else
+                                tempchar = (tempchar >> packed_data_offset) & packed_data_mask;
+                        }
+    #ifdef H5_VMS
+                        h5tools_str_append(str, OPT(info->fmt_schar, "%hd"), tempchar);
+    #else
+                        h5tools_str_append(str, OPT(info->fmt_schar, "%hhd"), tempchar);
+    #endif
                     }
-                    h5tools_str_append(str, OPT(info->fmt_llong, fmt_llong), templlong);
-                }
-                else if (H5Tequal(type, H5T_NATIVE_ULLONG)) {
-                    HDmemcpy(&tempullong, vp, sizeof(unsigned long long));
-                    if (packed_bits_num) {
-                        if (packed_data_offset >= 8 * sizeof(unsigned long long))
-                            tempullong = 0;
-                        else
-                            tempullong = (tempullong >> packed_data_offset) & packed_data_mask;
+                } /* end if (sizeof(char) == nsize) */
+                else if (sizeof(int) == nsize) {
+                    if(H5T_SGN_NONE == nsign) {
+                        /* if (H5Tequal(type, H5T_NATIVE_UINT)) */
+                        HDmemcpy(&tempuint, vp, sizeof(unsigned int));
+                        if (packed_bits_num) {
+                            if (packed_data_offset >= 8 * sizeof(unsigned int))
+                                tempuint = 0;
+                            else
+                                tempuint = (tempuint >> packed_data_offset) & packed_data_mask;
+                        }
+                        h5tools_str_append(str, OPT(info->fmt_uint, "%u"), tempuint);
                     }
-                    h5tools_str_append(str, OPT(info->fmt_ullong, fmt_ullong), tempullong);
-                }
-                else if (H5Tequal(type, H5T_NATIVE_HSSIZE)) {
-                    if (sizeof(hssize_t) == sizeof(int)) {
+                    else {
+                        /* if (H5Tequal(type, H5T_NATIVE_INT)) */
                         HDmemcpy(&tempint, vp, sizeof(int));
+                        if (packed_bits_num) {
+                            if (packed_data_offset >= 8 * sizeof(int))
+                                tempint = 0;
+                            else
+                                tempint = (tempint >> packed_data_offset) & packed_data_mask;
+                        }
                         h5tools_str_append(str, OPT(info->fmt_int, "%d"), tempint);
                     }
-                    else if (sizeof(hssize_t) == sizeof(long)) {
-                        HDmemcpy(&templong, vp, sizeof(long));
-                        h5tools_str_append(str, OPT(info->fmt_long, "%ld"), templong);
+                } /* end if (sizeof(int) == nsize) */
+                else if (sizeof(short) == nsize) {
+                    if(H5T_SGN_NONE == nsign) {
+                        /* if (H5Tequal(type, H5T_NATIVE_USHORT)) */
+                        unsigned short tempushort;
+
+                        HDmemcpy(&tempushort, vp, sizeof(unsigned short));
+                        if (packed_bits_num) {
+                            if (packed_data_offset >= 8 * sizeof(unsigned short))
+                                tempushort = 0;
+                            else
+                                tempushort = (tempushort >> packed_data_offset) & packed_data_mask;
+                        }
+                        h5tools_str_append(str, OPT(info->fmt_ushort, "%u"), tempushort);
                     }
                     else {
-                        HDmemcpy(&templlong, vp, sizeof(long long));
-                        h5tools_str_append(str, OPT(info->fmt_llong, fmt_llong), templlong);
-                    }
-                }
-                else if (H5Tequal(type, H5T_NATIVE_HSIZE)) {
-                    if (sizeof(hsize_t) == sizeof(int)) {
-                        HDmemcpy(&tempuint, vp, sizeof(unsigned int));
-                        h5tools_str_append(str, OPT(info->fmt_uint, "%u"), tempuint);
+                        /* if (H5Tequal(type, H5T_NATIVE_SHORT)) */
+                        short tempshort;
+
+                        HDmemcpy(&tempshort, vp, sizeof(short));
+                        if (packed_bits_num) {
+                            if (packed_data_offset >= 8 * sizeof(short))
+                                tempshort = 0;
+                            else
+                                tempshort = (tempshort >> packed_data_offset) & packed_data_mask;
+                        }
+                        h5tools_str_append(str, OPT(info->fmt_short, "%d"), tempshort);
                     }
-                    else if (sizeof(hsize_t) == sizeof(long)) {
-                        HDmemcpy(&tempulong, vp, sizeof(long));
+                } /* end if (sizeof(short) == nsize) */
+                else if (sizeof(long) == nsize) {
+                    if(H5T_SGN_NONE == nsign) {
+                        /* if (H5Tequal(type, H5T_NATIVE_ULONG)) */
+                        HDmemcpy(&tempulong, vp, sizeof(unsigned long));
+                        if (packed_bits_num) {
+                            if (packed_data_offset >= 8 * sizeof(unsigned long))
+                                tempulong = 0;
+                            else
+                                tempulong = (tempulong >> packed_data_offset) & packed_data_mask;
+                        }
                         h5tools_str_append(str, OPT(info->fmt_ulong, "%lu"), tempulong);
                     }
                     else {
+                        /* if (H5Tequal(type, H5T_NATIVE_LONG)) */
+                        HDmemcpy(&templong, vp, sizeof(long));
+                        if (packed_bits_num) {
+                            if (packed_data_offset >= 8 * sizeof(long))
+                                templong = 0;
+                            else
+                                templong = (templong >> packed_data_offset) & packed_data_mask;
+                        }
+                        h5tools_str_append(str, OPT(info->fmt_long, "%ld"), templong);
+                    }
+                } /* end if (sizeof(long) == nsize) */
+                else if (sizeof(long long) == nsize) {
+                    if(H5T_SGN_NONE == nsign) {
+                        /* if (H5Tequal(type, H5T_NATIVE_ULLONG)) */
                         HDmemcpy(&tempullong, vp, sizeof(unsigned long long));
+                        if (packed_bits_num) {
+                            if (packed_data_offset >= 8 * sizeof(unsigned long long))
+                                tempullong = 0;
+                            else
+                                tempullong = (tempullong >> packed_data_offset) & packed_data_mask;
+                        }
                         h5tools_str_append(str, OPT(info->fmt_ullong, fmt_ullong), tempullong);
                     }
-                }
+                    else {
+                        /* if (H5Tequal(type, H5T_NATIVE_LLONG)) */
+                        HDmemcpy(&templlong, vp, sizeof(long long));
+                        if (packed_bits_num) {
+                            if (packed_data_offset >= 8 * sizeof(long long))
+                                templlong = 0;
+                            else
+                                templlong = (templlong >> packed_data_offset) & packed_data_mask;
+                        }
+                        h5tools_str_append(str, OPT(info->fmt_llong, fmt_llong), templlong);
+                    }
+                } /* end if (sizeof(long long) == nsize) */
                 break;
             case H5T_COMPOUND:
                 {
@@ -1024,75 +1022,71 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai
                     }
                     else {
                         size_t i;
-                        n = H5Tget_size(type);
-                        if (1 == n) {
+                        if (1 == nsize) {
                             h5tools_str_append(str, "0x%02x", ucp_vp[0]);
                         }
                         else {
-                            for (i = 0; i < n; i++)
+                            for (i = 0; i < nsize; i++)
                                 h5tools_str_append(str, "%s%02x", i ? ":" : "", ucp_vp[i]);
                         }
                     }
                 }
                 break;
             case H5T_REFERENCE:
-                if (H5Tequal(type, H5T_STD_REF_DSETREG)) {
-                    if (h5tools_str_is_zero(vp, H5Tget_size(type))) {
-                        h5tools_str_append(str, "NULL");
-                    }
-                    else {
-                        h5tools_str_sprint_region(str, info, container, vp);
-                    }
+                if (h5tools_str_is_zero(vp, nsize)) {
+                    h5tools_str_append(str, "NULL");
                 }
-                else if (H5Tequal(type, H5T_STD_REF_OBJ)) {
-                    /*
-                     * Object references -- show the type and OID of the referenced
-                     * object.
-                     */
-                    if (h5tools_str_is_zero(vp, H5Tget_size(type))) {
-                        h5tools_str_append(str, "NULL");
+                else {
+                    if (nsize == H5R_DSET_REG_REF_BUF_SIZE) {
+                        /* if (H5Tequal(type, H5T_STD_REF_DSETREG)) */
+                        h5tools_str_sprint_region(str, info, container, vp);
                     }
-                    else {
-                        H5O_info_t oi;
-                        const char *path;
-
-                        obj = H5Rdereference2(container, H5P_DEFAULT, H5R_OBJECT, vp);
-                        H5Oget_info(obj, &oi);
-
-                        /* Print object type and close object */
-                        switch (oi.type) {
-                            case H5O_TYPE_GROUP:
-                                h5tools_str_append(str, H5_TOOLS_GROUP);
-                                break;
-
-                            case H5O_TYPE_DATASET:
-                                h5tools_str_append(str, H5_TOOLS_DATASET);
-                                break;
-
-                            case H5O_TYPE_NAMED_DATATYPE:
-                                h5tools_str_append(str, H5_TOOLS_DATATYPE);
-                                break;
-
-                            default:
-                                h5tools_str_append(str, "%u-", (unsigned) oi.type);
-                                break;
-                        } /* end switch */
-                        H5Oclose(obj);
-
-                        /* Print OID */
-                        if (info->obj_hidefileno)
-                            h5tools_str_append(str, info->obj_format, oi.addr);
-                        else
-                            h5tools_str_append(str, info->obj_format, oi.fileno, oi.addr);
-
-                        /* Print name */
-                        path = lookup_ref_path(*(haddr_t *) vp);
-                        if (path) {
-                            h5tools_str_append(str, " ");
-                            h5tools_str_append(str, path);
-                            h5tools_str_append(str, " ");
-                        } /* end if */
-                    } /* end else */
+                    else if (nsize == H5R_OBJ_REF_BUF_SIZE) {
+                        /* if (H5Tequal(type, H5T_STD_REF_OBJ)) */
+                            /*
+                             * Object references -- show the type and OID of the referenced
+                             * object.
+                             */
+                            H5O_info_t oi;
+                            const char *path;
+
+                            obj = H5Rdereference2(container, H5P_DEFAULT, H5R_OBJECT, vp);
+                            H5Oget_info(obj, &oi);
+
+                            /* Print object type and close object */
+                            switch (oi.type) {
+                                case H5O_TYPE_GROUP:
+                                    h5tools_str_append(str, H5_TOOLS_GROUP);
+                                    break;
+
+                                case H5O_TYPE_DATASET:
+                                    h5tools_str_append(str, H5_TOOLS_DATASET);
+                                    break;
+
+                                case H5O_TYPE_NAMED_DATATYPE:
+                                    h5tools_str_append(str, H5_TOOLS_DATATYPE);
+                                    break;
+
+                                default:
+                                    h5tools_str_append(str, "%u-", (unsigned) oi.type);
+                                    break;
+                            } /* end switch */
+                            H5Oclose(obj);
+
+                            /* Print OID */
+                            if (info->obj_hidefileno)
+                                h5tools_str_append(str, info->obj_format, oi.addr);
+                            else
+                                h5tools_str_append(str, info->obj_format, oi.fileno, oi.addr);
+
+                            /* Print name */
+                            path = lookup_ref_path(*(haddr_t *) vp);
+                            if (path) {
+                                h5tools_str_append(str, " ");
+                                h5tools_str_append(str, path);
+                                h5tools_str_append(str, " ");
+                            } /* end if */
+                    } /* end else if (H5Tequal(type, H5T_STD_REF_OBJ)) */
                 }
                 break;
             case H5T_ARRAY:
@@ -1206,12 +1200,11 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai
                 {
                     /* All other types get printed as hexadecimal */
                     size_t i;
-                    n = H5Tget_size(type);
-                    if (1 == n) {
+                    if (1 == nsize) {
                         h5tools_str_append(str, "0x%02x", ucp_vp[0]);
                     }
                     else {
-                        for (i = 0; i < n; i++)
+                        for (i = 0; i < nsize; i++)
                             h5tools_str_append(str, "%s%02x", i ? ":" : "", ucp_vp[i]);
                     }
                 }
diff --git a/tools/misc/CMakeLists.txt b/tools/misc/CMakeLists.txt
index d310d3d..e778d2f 100644
--- a/tools/misc/CMakeLists.txt
+++ b/tools/misc/CMakeLists.txt
@@ -62,7 +62,7 @@ IF (BUILD_TESTING)
   SET_TARGET_PROPERTIES (h5repart_test PROPERTIES FOLDER tools)
   
   # --------------------------------------------------------------------
-  # Copy all the HDF5 files from the test directory into the source directory
+  # Copy all the HDF5 files from the source directory into the test directory
   # --------------------------------------------------------------------
   SET (HDF5_REFERENCE_TEST_FILES
       family_file00000.h5
@@ -97,37 +97,43 @@ IF (BUILD_TESTING)
   ENDFOREACH (h5_file ${HDF5_REFERENCE_TEST_FILES})
   
   SET (HDF5_MKGRP_TEST_FILES
-      #h5mkgrp_help
+      #h5mkgrp_help.txt
       #h5mkgrp_version
-      h5mkgrp_single
-      h5mkgrp_single_latest
-      h5mkgrp_several
-      h5mkgrp_several_latest
-      h5mkgrp_nested
-      h5mkgrp_nested_latest
-      h5mkgrp_nested_mult
-      h5mkgrp_nested_mult_latest
+      h5mkgrp_single.ls
+      h5mkgrp_single_v.ls
+      h5mkgrp_single_p.ls
+      h5mkgrp_single_l.ls
+      h5mkgrp_several.ls
+      h5mkgrp_several_v.ls
+      h5mkgrp_several_p.ls
+      h5mkgrp_several_l.ls
+      h5mkgrp_nested_p.ls
+      h5mkgrp_nested_lp.ls
+      h5mkgrp_nested_mult_p.ls
+      h5mkgrp_nested_mult_lp.ls
   )
 
-  FILE (MAKE_DIRECTORY "${PROJECT_BINARY_DIR}/../testfiles")
+  # make test dir
+  FILE (MAKE_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles")
+
   FOREACH (h5_mkgrp_file ${HDF5_MKGRP_TEST_FILES})
-    SET (dest "${PROJECT_BINARY_DIR}/${h5_mkgrp_file}")
+    SET (dest "${PROJECT_BINARY_DIR}/testfiles/${h5_mkgrp_file}")
     #MESSAGE (STATUS " Copying ${h5_mkgrp_file}")
     ADD_CUSTOM_COMMAND (
         TARGET     h5mkgrp
         POST_BUILD
-        COMMAND    ${XLATE_UTILITY}
-        ARGS       ${HDF5_TOOLS_SRC_DIR}/testfiles/${h5_mkgrp_file}.ls ${dest}.ls -l3
+        COMMAND    ${CMAKE_COMMAND}
+        ARGS       -E copy_if_different ${HDF5_TOOLS_SRC_DIR}/testfiles/${h5_mkgrp_file} ${dest}
     )
   ENDFOREACH (h5_mkgrp_file ${HDF5_MKGRP_TEST_FILES})
 
   ADD_CUSTOM_COMMAND (
       TARGET     h5mkgrp
       POST_BUILD
-      COMMAND    ${XLATE_UTILITY}
-      ARGS       ${PROJECT_SOURCE_DIR}/testfiles/h5mkgrp_help.txt ${PROJECT_BINARY_DIR}/h5mkgrp_help.txt -l0
+      COMMAND    ${CMAKE_COMMAND}
+      ARGS       -E copy_if_different ${PROJECT_SOURCE_DIR}/testfiles/h5mkgrp_help.txt ${PROJECT_BINARY_DIR}/testfiles/h5mkgrp_help.txt
   )
-  CONFIGURE_FILE (${PROJECT_SOURCE_DIR}/testfiles/h5mkgrp_version.txt.in ${PROJECT_BINARY_DIR}/h5mkgrp_version.txt @ONLY)
+  CONFIGURE_FILE (${PROJECT_SOURCE_DIR}/testfiles/h5mkgrp_version.txt.in ${PROJECT_BINARY_DIR}/testfiles/h5mkgrp_version.txt @ONLY)
 
 ##############################################################################
 ##############################################################################
@@ -136,102 +142,71 @@ IF (BUILD_TESTING)
 ##############################################################################
 
   MACRO (ADD_H5_TEST resultfile resultcode resultoption)
-    IF (NOT ${resultoption} STREQUAL " ")
-      ADD_TEST (
-          NAME H5MKGRP-clear-${resultfile}${resultoption}
-          COMMAND    ${CMAKE_COMMAND}
-              -E remove 
-                  ${PROJECT_BINARY_DIR}/../testfiles/${resultfile}.h5 
-                  ${PROJECT_BINARY_DIR}/${resultfile}.out
-                  ${PROJECT_BINARY_DIR}/${resultfile}.out.err
-      )
-      IF (NOT "${last_test}" STREQUAL "")
-        SET_TESTS_PROPERTIES (H5MKGRP-clear-${resultfile}${resultoption} PROPERTIES DEPENDS ${last_test})
-      ENDIF (NOT "${last_test}" STREQUAL "")
-      ADD_TEST (
-          NAME H5MKGRP-${resultfile}${resultoption}
-          COMMAND $<TARGET_FILE:h5mkgrp> ${resultoption} ${PROJECT_BINARY_DIR}/../testfiles/${resultfile}.h5 ${ARGN}
-      )
-      SET_TESTS_PROPERTIES (H5MKGRP-${resultfile}${resultoption} PROPERTIES DEPENDS H5MKGRP-clear-${resultfile}${resultoption})
-      SET (last_test "H5MKGRP-${resultfile}${resultoption}")
-      IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-        ADD_TEST (
-            NAME H5MKGRP-h5ls-${resultfile}${resultoption}
-            COMMAND "${CMAKE_COMMAND}"
-                -D "TEST_PROGRAM=$<TARGET_FILE:h5ls>"
-                -D "TEST_ARGS:STRING=-v;-r;../testfiles/${resultfile}.h5"
-                -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-                -D "TEST_OUTPUT=${resultfile}.out"
-                -D "TEST_EXPECT=${resultcode}"
-                -D "TEST_MASK_MOD=true"
-                -D "TEST_REFERENCE=${resultfile}.ls"
-                -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
-        )
-        SET_TESTS_PROPERTIES (H5MKGRP-h5ls-${resultfile}${resultoption} PROPERTIES DEPENDS H5MKGRP-${resultfile}${resultoption})
-        SET (last_test "H5MKGRP-h5ls-${resultfile}${resultoption}")
-      ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-    ELSE (NOT ${resultoption} STREQUAL " ")
+    IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
-          NAME H5MKGRP-clear-${resultfile}
+          NAME H5MKGRP-${resultfile}-clear-objects
           COMMAND    ${CMAKE_COMMAND}
               -E remove 
-                  ${PROJECT_BINARY_DIR}/../testfiles/${resultfile}.h5 
-                  ${PROJECT_BINARY_DIR}/${resultfile}.out
-                  ${PROJECT_BINARY_DIR}/${resultfile}.out.err
+                  ${resultfile}.h5 
+                  ${resultfile}.out
+                  ${resultfile}.out.err
       )
+      SET_TESTS_PROPERTIES (H5MKGRP-${resultfile}-clear-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles")
+    ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+      
+    ADD_TEST (
+        NAME H5MKGRP-${resultfile}
+        COMMAND $<TARGET_FILE:h5mkgrp> ${resultoption} ${resultfile}.h5 ${ARGN}
+    )
+    SET_TESTS_PROPERTIES (H5MKGRP-${resultfile} PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles")
+    IF (HDF5_ENABLE_USING_MEMCHECKER)
       IF (NOT "${last_test}" STREQUAL "")
-        SET_TESTS_PROPERTIES (H5MKGRP-clear-${resultfile} PROPERTIES DEPENDS ${last_test})
+        SET_TESTS_PROPERTIES (H5MKGRP-${resultfile} PROPERTIES DEPENDS ${last_test})
       ENDIF (NOT "${last_test}" STREQUAL "")
+    ELSE (HDF5_ENABLE_USING_MEMCHECKER)
+      SET_TESTS_PROPERTIES (H5MKGRP-${resultfile} PROPERTIES DEPENDS H5MKGRP-${resultfile}-clear-objects)
       ADD_TEST (
-          NAME H5MKGRP-${resultfile}
-          COMMAND $<TARGET_FILE:h5mkgrp> ${PROJECT_BINARY_DIR}/../testfiles/${resultfile}.h5 ${ARGN}
+          NAME H5MKGRP-${resultfile}-h5ls
+          COMMAND "${CMAKE_COMMAND}"
+              -D "TEST_PROGRAM=$<TARGET_FILE:h5ls>"
+              -D "TEST_ARGS:STRING=-v;-r;${resultfile}.h5"
+              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles"
+              -D "TEST_OUTPUT=${resultfile}.out"
+              -D "TEST_EXPECT=${resultcode}"
+              -D "TEST_MASK_MOD=true"
+              -D "TEST_REFERENCE=${resultfile}.ls"
+              -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
       )
-      SET_TESTS_PROPERTIES (H5MKGRP-${resultfile} PROPERTIES DEPENDS H5MKGRP-clear-${resultfile})
-      SET (last_test "H5MKGRP-${resultfile}")
-      IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-        ADD_TEST (
-            NAME H5MKGRP-h5ls-${resultfile}
-            COMMAND "${CMAKE_COMMAND}"
-                -D "TEST_PROGRAM=$<TARGET_FILE:h5ls>"
-                -D "TEST_ARGS:STRING=-v;-r;../testfiles/${resultfile}.h5"
-                -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-                -D "TEST_OUTPUT=${resultfile}.out"
-                -D "TEST_EXPECT=${resultcode}"
-                -D "TEST_MASK_MOD=true"
-                -D "TEST_REFERENCE=${resultfile}.ls"
-                -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
-        )
-        SET_TESTS_PROPERTIES (H5MKGRP-h5ls-${resultfile} PROPERTIES DEPENDS H5MKGRP-${resultfile})
-        SET (last_test "H5MKGRP-h5ls-${resultfile}")
-      ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
-    ENDIF (NOT ${resultoption} STREQUAL " ")
+      SET_TESTS_PROPERTIES (H5MKGRP-${resultfile}-h5ls PROPERTIES DEPENDS H5MKGRP-${resultfile})
+    ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
   ENDMACRO (ADD_H5_TEST resultfile resultcode resultoption)
 
   MACRO (ADD_H5_CMP resultfile resultcode)
-    ADD_TEST (
-        NAME H5MKGRP_CMP-clear-${resultfile}
-        COMMAND    ${CMAKE_COMMAND}
-            -E remove 
-                ${PROJECT_BINARY_DIR}/../testfiles/${resultfile}.h5 
-                ${PROJECT_BINARY_DIR}/${resultfile}.out
-                ${PROJECT_BINARY_DIR}/${resultfile}.out.err
-    )
     IF (HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (NAME H5MKGRP_CMP-${resultfile} COMMAND $<TARGET_FILE:h5mkgrp> ${ARGN})
     ELSE (HDF5_ENABLE_USING_MEMCHECKER)
       ADD_TEST (
+          NAME H5MKGRP_CMP-${resultfile}-clear-objects
+          COMMAND    ${CMAKE_COMMAND}
+              -E remove 
+                  ${resultfile}.h5 
+                  ${resultfile}.out
+                  ${resultfile}.out.err
+      )
+      SET_TESTS_PROPERTIES (H5MKGRP_CMP-${resultfile}-clear-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles")
+      ADD_TEST (
           NAME H5MKGRP_CMP-${resultfile}
           COMMAND "${CMAKE_COMMAND}"
               -D "TEST_PROGRAM=$<TARGET_FILE:h5mkgrp>"
               -D "TEST_ARGS:STRING=${ARGN}"
-              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
+              -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles"
               -D "TEST_OUTPUT=${resultfile}.out"
               -D "TEST_EXPECT=${resultcode}"
               -D "TEST_REFERENCE=${resultfile}.txt"
               -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
       )
+      SET_TESTS_PROPERTIES (H5MKGRP_CMP-${resultfile} PROPERTIES DEPENDS H5MKGRP_CMP-${resultfile}-clear-objects)
     ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
-    SET_TESTS_PROPERTIES (H5MKGRP_CMP-${resultfile} PROPERTIES DEPENDS H5MKGRP_CMP-clear-${resultfile})
   ENDMACRO (ADD_H5_CMP resultfile resultcode)
 
 ##############################################################################
@@ -242,71 +217,115 @@ IF (BUILD_TESTING)
 
   # Remove any output file left over from previous test run
   ADD_TEST (
-      NAME h5repart_20K-clear-objects
-      COMMAND    ${CMAKE_COMMAND}
-          -E remove 
-          fst_family00000.h5
+    NAME H5REPART-clearall-objects
+    COMMAND    ${CMAKE_COMMAND}
+        -E remove 
+        fst_family00000.h5
+        scd_family00000.h5
+        scd_family00001.h5
+        scd_family00002.h5
+        scd_family00003.h5
+        family_to_sec2.h5
   )
+  IF (NOT "${last_test}" STREQUAL "")
+    SET_TESTS_PROPERTIES (H5REPART-clearall-objects PROPERTIES DEPENDS ${last_test})
+  ENDIF (NOT "${last_test}" STREQUAL "")
+  SET (last_test "H5REPART-clearall-objects")
+  
   # repartition family member size to 20,000 bytes.
-  ADD_TEST (NAME h5repart_20K COMMAND $<TARGET_FILE:h5repart> -m 20000 family_file%05d.h5 fst_family%05d.h5)
-  SET_TESTS_PROPERTIES (h5repart_20K PROPERTIES DEPENDS h5repart_20K-clear-objects)
+  ADD_TEST (NAME H5REPART-h5repart_20K COMMAND $<TARGET_FILE:h5repart> -m 20000 family_file%05d.h5 fst_family%05d.h5)
+  SET_TESTS_PROPERTIES (H5REPART-h5repart_20K PROPERTIES DEPENDS H5REPART-clearall-objects)
 
-  # Remove any output file left over from previous test run
-  ADD_TEST (
-      NAME h5repart_5K-clear-objects
-      COMMAND    ${CMAKE_COMMAND}
-          -E remove 
-          scd_family00000.h5
-          scd_family00001.h5
-          scd_family00002.h5
-          scd_family00003.h5
-  )
-  SET_TESTS_PROPERTIES (h5repart_5K-clear-objects PROPERTIES DEPENDS h5repart_20K)
   # repartition family member size to 5 KB.
-  ADD_TEST (NAME h5repart_5K COMMAND $<TARGET_FILE:h5repart> -m 5k family_file%05d.h5 scd_family%05d.h5)
-  SET_TESTS_PROPERTIES (h5repart_5K PROPERTIES DEPENDS h5repart_5K-clear-objects)
+  ADD_TEST (NAME H5REPART-h5repart_5K COMMAND $<TARGET_FILE:h5repart> -m 5k family_file%05d.h5 scd_family%05d.h5)
+  SET_TESTS_PROPERTIES (H5REPART-h5repart_5K PROPERTIES DEPENDS H5REPART-clearall-objects)
 
-  # Remove any output file left over from previous test run
-  ADD_TEST (
-      NAME h5repart_sec2-clear-objects
-      COMMAND    ${CMAKE_COMMAND}
-          -E remove 
-          family_to_sec2.h5
-  )
-  SET_TESTS_PROPERTIES (h5repart_sec2-clear-objects PROPERTIES DEPENDS h5repart_5K)
   # convert family file to sec2 file of 20,000 bytes
-  ADD_TEST (NAME h5repart_sec2 COMMAND $<TARGET_FILE:h5repart> -m 20000 -family_to_sec2 family_file%05d.h5 family_to_sec2.h5)
-  SET_TESTS_PROPERTIES (h5repart_sec2 PROPERTIES DEPENDS h5repart_sec2-clear-objects)
+  ADD_TEST (NAME H5REPART-h5repart_sec2 COMMAND $<TARGET_FILE:h5repart> -m 20000 -family_to_sec2 family_file%05d.h5 family_to_sec2.h5)
+  SET_TESTS_PROPERTIES (H5REPART-h5repart_sec2 PROPERTIES DEPENDS H5REPART-clearall-objects)
 
   # test the output files repartitioned above.
-  ADD_TEST (NAME h5repart_test COMMAND $<TARGET_FILE:h5repart_test>)
-  SET_TESTS_PROPERTIES (h5repart_test PROPERTIES DEPENDS h5repart_sec2)
+  ADD_TEST (NAME H5REPART-h5repart_test COMMAND $<TARGET_FILE:h5repart_test>)
+  SET_TESTS_PROPERTIES (H5REPART-h5repart_test PROPERTIES DEPENDS H5REPART-clearall-objects DEPENDS H5REPART-h5repart_20K DEPENDS H5REPART-h5repart_5K DEPENDS H5REPART-h5repart_sec2)
 
   SET (H5_DEP_EXECUTABLES ${H5_DEP_EXECUTABLES}
         h5repart_test
   )
+  
+  IF (HDF5_ENABLE_USING_MEMCHECKER)
+    ADD_TEST (
+        NAME H5MKGRP-clearall-objects
+        COMMAND    ${CMAKE_COMMAND}
+            -E remove 
+                h5mkgrp_help.out
+                h5mkgrp_help.out.err
+                h5mkgrp_version.out
+                h5mkgrp_version.out.err
+                h5mkgrp_single.h5 
+                h5mkgrp_single.out
+                h5mkgrp_single.out.err
+                h5mkgrp_single_v.h5 
+                h5mkgrp_single_v.out
+                h5mkgrp_single_v.out.err
+                h5mkgrp_single_p.h5 
+                h5mkgrp_single_p.out
+                h5mkgrp_single_p.out.err
+                h5mkgrp_single_l.h5 
+                h5mkgrp_single_l.out
+                h5mkgrp_single_l.out.err
+                h5mkgrp_several.h5 
+                h5mkgrp_several.out
+                h5mkgrp_several.out.err
+                h5mkgrp_several_v.h5 
+                h5mkgrp_several_v.out
+                h5mkgrp_several_v.out.err
+                h5mkgrp_several_p.h5 
+                h5mkgrp_several_p.out
+                h5mkgrp_several_p.out.err
+                h5mkgrp_several_l.h5 
+                h5mkgrp_several_l.out
+                h5mkgrp_several_l.out.err
+                h5mkgrp_nested_p.h5 
+                h5mkgrp_nested_p.out
+                h5mkgrp_nested_p.out.err
+                h5mkgrp_nested_lp.h5 
+                h5mkgrp_nested_lp.out
+                h5mkgrp_nested_lp.out.err
+                h5mkgrp_nested_mult_p.h5 
+                h5mkgrp_nested_mult_p.out
+                h5mkgrp_nested_mult_p.out.err
+                h5mkgrp_nested_mult_lp.h5 
+                h5mkgrp_nested_mult_lp.out
+                h5mkgrp_nested_mult_lp.out.err
+    )
+    SET_TESTS_PROPERTIES (H5MKGRP-clearall-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles")
+    IF (NOT "${last_test}" STREQUAL "")
+      SET_TESTS_PROPERTIES (H5MKGRP-clearall-objects PROPERTIES DEPENDS ${last_test})
+    ENDIF (NOT "${last_test}" STREQUAL "")
+    SET (last_test "H5MKGRP-clearall-objects")
+  ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
 
   # Check that help & version is displayed properly
   ADD_H5_CMP (h5mkgrp_help 0 "-h")
   ADD_H5_CMP (h5mkgrp_version 0 "-V")
 
   # Create single group at root level
-  ADD_H5_TEST (h5mkgrp_single 0 " " single)
-  ADD_H5_TEST (h5mkgrp_single 0 "-v" single)
-  ADD_H5_TEST (h5mkgrp_single 0 "-p" single)
-  ADD_H5_TEST (h5mkgrp_single_latest 0 "-l" latest)
+  ADD_H5_TEST (h5mkgrp_single 0 "" single)
+  ADD_H5_TEST (h5mkgrp_single_v 0 "-v" single)
+  ADD_H5_TEST (h5mkgrp_single_p 0 "-p" single)
+  ADD_H5_TEST (h5mkgrp_single_l 0 "-l" latest)
 
   # Create several groups at root level
-  ADD_H5_TEST (h5mkgrp_several 0 " " one two)
-  ADD_H5_TEST (h5mkgrp_several 0 "-v" one two)
-  ADD_H5_TEST (h5mkgrp_several 0 "-p" one two)
-  ADD_H5_TEST (h5mkgrp_several_latest 0 "-l" one two)
+  ADD_H5_TEST (h5mkgrp_several 0 "" one two)
+  ADD_H5_TEST (h5mkgrp_several_v 0 "-v" one two)
+  ADD_H5_TEST (h5mkgrp_several_p 0 "-p" one two)
+  ADD_H5_TEST (h5mkgrp_several_l 0 "-l" one two)
 
   # Create various nested groups 
-  ADD_H5_TEST (h5mkgrp_nested 0 "-p" /one/two)
-  ADD_H5_TEST (h5mkgrp_nested_latest 0 "-lp" /one/two)
-  ADD_H5_TEST (h5mkgrp_nested_mult 0 "-p" /one/two /three/four)
-  ADD_H5_TEST (h5mkgrp_nested_mult_latest 0 "-lp" /one/two /three/four)
+  ADD_H5_TEST (h5mkgrp_nested_p 0 "-p" /one/two)
+  ADD_H5_TEST (h5mkgrp_nested_lp 0 "-lp" /one/two)
+  ADD_H5_TEST (h5mkgrp_nested_mult_p 0 "-p" /one/two /three/four)
+  ADD_H5_TEST (h5mkgrp_nested_mult_lp 0 "-lp" /one/two /three/four)
 ENDIF (BUILD_TESTING)
 
 ##############################################################################
diff --git a/tools/misc/Makefile.in b/tools/misc/Makefile.in
index 8c2e1c1..3320276 100644
--- a/tools/misc/Makefile.in
+++ b/tools/misc/Makefile.in
@@ -288,6 +288,7 @@ H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
 HAVE_DMALLOC = @HAVE_DMALLOC@
 HAVE_FORTRAN_2003 = @HAVE_FORTRAN_2003@
+HAVE_PTHREAD = @HAVE_PTHREAD@
 HDF5_HL = @HDF5_HL@
 HDF5_INTERFACES = @HDF5_INTERFACES@
 HDF_CXX = @HDF_CXX@
@@ -339,7 +340,6 @@ PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
 PATH_SEPARATOR = @PATH_SEPARATOR@
 PERL = @PERL@
-PTHREAD = @PTHREAD@
 RANLIB = @RANLIB@
 ROOT = @ROOT@
 RUNPARALLEL = @RUNPARALLEL@
diff --git a/tools/misc/testh5mkgrp.sh.in b/tools/misc/testh5mkgrp.sh.in
index dc127e8..5ec1a28 100644
--- a/tools/misc/testh5mkgrp.sh.in
+++ b/tools/misc/testh5mkgrp.sh.in
@@ -31,15 +31,85 @@ H5LS=h5ls                   # The h5ls tool name
 H5LS_ARGS=-vr               # Arguments to the h5ls tool
 H5LS_BIN=`pwd`/../h5ls/$H5LS # The path of the h5ls tool binary
 
+CMP='cmp'
+DIFF='diff -c'
+CP='cp'
+DIRNAME='dirname'
+LS='ls'
+AWK='awk'
+
 nerrors=0
 verbose=yes
 
-INDIR=$srcdir/../testfiles
-OUTDIR=../testfiles
+# source dirs
+SRC_TOOLS="$srcdir/../"
+
+SRC_TOOLS_TESTFILES="$SRC_TOOLS/testfiles"
+# testfiles source dirs for tools
+SRC_H5MKGRP_TESTFILES="$SRC_TOOLS/misc/testfiles"
+
+TESTDIR=./testfiles
+test -d $TESTDIR || mkdir -p $TESTDIR
+
+######################################################################
+# test files
+# --------------------------------------------------------------------
+# All the test files copy from source directory to test directory
+# NOTE: Keep this framework to add/remove test files.
+#       Any test files from other tools can be used in this framework.
+#       This list are also used for checking exist.
+#       Comment '#' without space can be used.
+# --------------------------------------------------------------------
+
 CMP='cmp -s'
 DIFF='diff -c'
 
-test -d $OUTDIR || mkdir $OUTDIR
+#
+# copy test files and expected output files from source dirs to test dir
+#
+COPY_TESTFILES="
+$SRC_H5MKGRP_TESTFILES/h5mkgrp_help.txt
+$SRC_TOOLS_TESTFILES/h5mkgrp_single.ls
+$SRC_TOOLS_TESTFILES/h5mkgrp_single_v.ls
+$SRC_TOOLS_TESTFILES/h5mkgrp_single_p.ls
+$SRC_TOOLS_TESTFILES/h5mkgrp_single_l.ls
+$SRC_TOOLS_TESTFILES/h5mkgrp_several.ls
+$SRC_TOOLS_TESTFILES/h5mkgrp_several_v.ls
+$SRC_TOOLS_TESTFILES/h5mkgrp_several_p.ls
+$SRC_TOOLS_TESTFILES/h5mkgrp_several_l.ls
+$SRC_TOOLS_TESTFILES/h5mkgrp_nested_p.ls
+$SRC_TOOLS_TESTFILES/h5mkgrp_nested_lp.ls
+$SRC_TOOLS_TESTFILES/h5mkgrp_nested_mult_p.ls
+$SRC_TOOLS_TESTFILES/h5mkgrp_nested_mult_lp.ls
+"
+
+COPY_TESTFILES_TO_TESTDIR()
+{
+    # copy test files. Used -f to make sure get a new copy
+    for tstfile in $COPY_TESTFILES
+    do
+        # ignore '#' comment
+        echo $tstfile | tr -d ' ' | grep '^#' > /dev/null
+        RET=$?
+        if [ $RET -eq 1 ]; then
+            # skip cp if srcdir is same as destdir
+            # this occurs when build/test performed in source dir and
+            # make cp fail
+            SDIR=`$DIRNAME $tstfile`
+            INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'`
+            INODE_DDIR=`$LS -i -d $TESTDIR | $AWK -F' ' '{print $1}'`
+            if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then
+                $CP -f $tstfile $TESTDIR
+                if [ $? -ne 0 ]; then
+                    echo "Error: FAILED to copy $tstfile ."
+                
+                    # Comment out this to CREATE expected file
+                    exit $EXIT_FAILURE
+                fi
+            fi
+        fi
+    done
+}
 
 # Print a line-line message left justified in a field of 70 characters
 # beginning with the word "Testing".
@@ -71,9 +141,7 @@ TOOLTEST()
 {
     TESTING $H5MKGRP $@
     (
-    echo "#############################"
-    echo " output for '$H5MKGRP $@'"
-    echo "#############################"
+    cd $TESTDIR
     $RUNSERIAL $H5MKGRP_BIN $@
     ) > output.out
     RET=$?
@@ -96,17 +164,15 @@ TOOLTEST()
 #
 H5LSTEST() 
 {
-    expect="$INDIR/`basename $1 .h5`.ls"
-    actual="$OUTDIR/`basename $1 .h5`.out"
+    expect="$TESTDIR/`basename $1 .h5`.ls"
+    actual="$TESTDIR/`basename $1 .h5`.out"
     actual_sav=${actual}-sav
 
     # Stderr is included in stdout so that the diff can detect
     # any unexpected output from that stream too.
     VERIFY_H5LS  $@
     (
-      echo "#############################"
-      echo "Expected output for '$H5LS $@'" 
-      echo "#############################"
+      cd $TESTDIR
       $RUNSERIAL $H5LS_BIN $H5LS_ARGS $@
     ) 2>&1 |sed 's/Modified:.*/Modified:  XXXX-XX-XX XX:XX:XX XXX/' >$actual
 
@@ -142,7 +208,7 @@ H5LSTEST()
 # $* are groups to create
 RUNTEST() 
 {
-    FILEOUT=$OUTDIR/$1
+    FILEOUT=$1
     shift
     H5MKGRP_ARGS=$1
     shift
@@ -158,9 +224,8 @@ RUNTEST()
 
     # Remove output file created, if the "no cleanup" environment variable is
     #   not defined
-echo "FILEOUT=" $FILEOUT
     if test -z "$HDF5_NOCLEANUP"; then
-        rm -f $FILEOUT
+        rm -f $TESTDIR/$FILEOUT
     fi
 }
 
@@ -172,16 +237,17 @@ echo "FILEOUT=" $FILEOUT
 # $* are groups to create
 CMPTEST() 
 {
-    FILEOUT=$OUTDIR/$1
-    expect="$srcdir/testfiles/`basename $1 .h5`.txt"
-    actual="$OUTDIR/`basename $1 .h5`.out"
-    actual_err="$OUTDIR/`basename $1 .h5`.err"
+    FILEOUT=$1
+    expect="$TESTDIR/`basename $1 .h5`.txt"
+    actual="$TESTDIR/`basename $1 .h5`.out"
+    actual_err="$TESTDIR/`basename $1 .h5`.err"
     shift
 
     # Stderr is included in stdout so that the diff can detect
     # any unexpected output from that stream too.
     TESTING $H5MKGRP $@
     (
+    cd $TESTDIR
     $RUNSERIAL $H5MKGRP_BIN $@
     ) >$actual 2>$actual_err
     cat $actual_err >> $actual
@@ -208,28 +274,30 @@ CMPTEST()
 ##############################################################################
 ###           T H E   T E S T S                                            ###
 ##############################################################################
+# prepare for test
+COPY_TESTFILES_TO_TESTDIR
 
 # Check that help & version is displayed properly
 CMPTEST h5mkgrp_help.h5 "-h"
-RUNTEST h5mkgrp_version.h5 "-V"
+#CMPTEST h5mkgrp_version.h5 "-V"
 
 # Create single group at root level
 RUNTEST h5mkgrp_single.h5 " " single
-RUNTEST h5mkgrp_single.h5 "-v" single
-RUNTEST h5mkgrp_single.h5 "-p" single
-RUNTEST h5mkgrp_single_latest.h5 "-l" latest
+RUNTEST h5mkgrp_single_v.h5 "-v" single
+RUNTEST h5mkgrp_single_p.h5 "-p" single
+RUNTEST h5mkgrp_single_l.h5 "-l" latest
 
 # Create several groups at root level
 RUNTEST h5mkgrp_several.h5 " " one two
-RUNTEST h5mkgrp_several.h5 "-v" one two
-RUNTEST h5mkgrp_several.h5 "-p" one two
-RUNTEST h5mkgrp_several_latest.h5 "-l" one two
+RUNTEST h5mkgrp_several_v.h5 "-v" one two
+RUNTEST h5mkgrp_several_p.h5 "-p" one two
+RUNTEST h5mkgrp_several_l.h5 "-l" one two
 
 # Create various nested groups 
-RUNTEST h5mkgrp_nested.h5 "-p" /one/two
-RUNTEST h5mkgrp_nested_latest.h5 "-lp" /one/two
-RUNTEST h5mkgrp_nested_mult.h5 "-p" /one/two /three/four
-RUNTEST h5mkgrp_nested_mult_latest.h5 "-lp" /one/two /three/four
+RUNTEST h5mkgrp_nested_p.h5 "-p" /one/two
+RUNTEST h5mkgrp_nested_lp.h5 "-lp" /one/two
+RUNTEST h5mkgrp_nested_mult_p.h5 "-p" /one/two /three/four
+RUNTEST h5mkgrp_nested_mult_lp.h5 "-lp" /one/two /three/four
 
 
 if test $nerrors -eq 0 ; then
diff --git a/tools/testfiles/h5mkgrp_help.ls b/tools/testfiles/h5mkgrp_help.ls
deleted file mode 100644
index ad2bd0f..0000000
--- a/tools/testfiles/h5mkgrp_help.ls
+++ /dev/null
@@ -1,4 +0,0 @@
-#############################
-Expected output for 'h5ls ../testfiles/h5mkgrp_help.h5'
-#############################
-../testfiles/h5mkgrp_help.h5: unable to open file
diff --git a/tools/testfiles/h5mkgrp_nested_latest.ls b/tools/testfiles/h5mkgrp_nested_lp.ls
index c00292d..1fe8ce8 100644
--- a/tools/testfiles/h5mkgrp_nested_latest.ls
+++ b/tools/testfiles/h5mkgrp_nested_lp.ls
@@ -1,7 +1,4 @@
-#############################
-Expected output for 'h5ls ../testfiles/h5mkgrp_nested_latest.h5'
-#############################
-Opened "../testfiles/h5mkgrp_nested_latest.h5" with sec2 driver.
+Opened "h5mkgrp_nested_lp.h5" with sec2 driver.
 /                        Group
     Location:  1:48
     Links:     1
diff --git a/tools/testfiles/h5mkgrp_nested_mult_latest.ls b/tools/testfiles/h5mkgrp_nested_mult_lp.ls
index 0b19ff9..50380ec 100644
--- a/tools/testfiles/h5mkgrp_nested_mult_latest.ls
+++ b/tools/testfiles/h5mkgrp_nested_mult_lp.ls
@@ -1,7 +1,4 @@
-#############################
-Expected output for 'h5ls ../testfiles/h5mkgrp_nested_mult_latest.h5'
-#############################
-Opened "../testfiles/h5mkgrp_nested_mult_latest.h5" with sec2 driver.
+Opened "h5mkgrp_nested_mult_lp.h5" with sec2 driver.
 /                        Group
     Location:  1:48
     Links:     1
diff --git a/tools/testfiles/h5mkgrp_nested_mult.ls b/tools/testfiles/h5mkgrp_nested_mult_p.ls
index 6a22ffd..f2b3b4b 100644
--- a/tools/testfiles/h5mkgrp_nested_mult.ls
+++ b/tools/testfiles/h5mkgrp_nested_mult_p.ls
@@ -1,7 +1,4 @@
-#############################
-Expected output for 'h5ls ../testfiles/h5mkgrp_nested_mult.h5'
-#############################
-Opened "../testfiles/h5mkgrp_nested_mult.h5" with sec2 driver.
+Opened "h5mkgrp_nested_mult_p.h5" with sec2 driver.
 /                        Group
     Location:  1:96
     Links:     1
diff --git a/tools/testfiles/h5mkgrp_nested.ls b/tools/testfiles/h5mkgrp_nested_p.ls
index 472656d..3034dbb 100644
--- a/tools/testfiles/h5mkgrp_nested.ls
+++ b/tools/testfiles/h5mkgrp_nested_p.ls
@@ -1,7 +1,4 @@
-#############################
-Expected output for 'h5ls ../testfiles/h5mkgrp_nested.h5'
-#############################
-Opened "../testfiles/h5mkgrp_nested.h5" with sec2 driver.
+Opened "h5mkgrp_nested_p.h5" with sec2 driver.
 /                        Group
     Location:  1:96
     Links:     1
diff --git a/tools/testfiles/h5mkgrp_several.ls b/tools/testfiles/h5mkgrp_several.ls
index bbf5c92..68a3f9c 100644
--- a/tools/testfiles/h5mkgrp_several.ls
+++ b/tools/testfiles/h5mkgrp_several.ls
@@ -1,7 +1,4 @@
-#############################
-Expected output for 'h5ls ../testfiles/h5mkgrp_several.h5'
-#############################
-Opened "../testfiles/h5mkgrp_several.h5" with sec2 driver.
+Opened "h5mkgrp_several.h5" with sec2 driver.
 /                        Group
     Location:  1:96
     Links:     1
diff --git a/tools/testfiles/h5mkgrp_several_latest.ls b/tools/testfiles/h5mkgrp_several_l.ls
index a3b5224..5e1b4be 100644
--- a/tools/testfiles/h5mkgrp_several_latest.ls
+++ b/tools/testfiles/h5mkgrp_several_l.ls
@@ -1,7 +1,4 @@
-#############################
-Expected output for 'h5ls ../testfiles/h5mkgrp_several_latest.h5'
-#############################
-Opened "../testfiles/h5mkgrp_several_latest.h5" with sec2 driver.
+Opened "h5mkgrp_several_l.h5" with sec2 driver.
 /                        Group
     Location:  1:48
     Links:     1
diff --git a/tools/testfiles/h5mkgrp_several_p.ls b/tools/testfiles/h5mkgrp_several_p.ls
new file mode 100644
index 0000000..43f1ce5
--- /dev/null
+++ b/tools/testfiles/h5mkgrp_several_p.ls
@@ -0,0 +1,10 @@
+Opened "h5mkgrp_several_p.h5" with sec2 driver.
+/                        Group
+    Location:  1:96
+    Links:     1
+/one                     Group
+    Location:  1:800
+    Links:     1
+/two                     Group
+    Location:  1:1832
+    Links:     1
diff --git a/tools/testfiles/h5mkgrp_several_v.ls b/tools/testfiles/h5mkgrp_several_v.ls
new file mode 100644
index 0000000..a6df87b
--- /dev/null
+++ b/tools/testfiles/h5mkgrp_several_v.ls
@@ -0,0 +1,10 @@
+Opened "h5mkgrp_several_v.h5" with sec2 driver.
+/                        Group
+    Location:  1:96
+    Links:     1
+/one                     Group
+    Location:  1:800
+    Links:     1
+/two                     Group
+    Location:  1:1832
+    Links:     1
diff --git a/tools/testfiles/h5mkgrp_single.ls b/tools/testfiles/h5mkgrp_single.ls
index e9932f7..f2bd01c 100644
--- a/tools/testfiles/h5mkgrp_single.ls
+++ b/tools/testfiles/h5mkgrp_single.ls
@@ -1,7 +1,4 @@
-#############################
-Expected output for 'h5ls ../testfiles/h5mkgrp_single.h5'
-#############################
-Opened "../testfiles/h5mkgrp_single.h5" with sec2 driver.
+Opened "h5mkgrp_single.h5" with sec2 driver.
 /                        Group
     Location:  1:96
     Links:     1
diff --git a/tools/testfiles/h5mkgrp_single_latest.ls b/tools/testfiles/h5mkgrp_single_l.ls
index b6e6ea4..1763a61 100644
--- a/tools/testfiles/h5mkgrp_single_latest.ls
+++ b/tools/testfiles/h5mkgrp_single_l.ls
@@ -1,7 +1,4 @@
-#############################
-Expected output for 'h5ls ../testfiles/h5mkgrp_single_latest.h5'
-#############################
-Opened "../testfiles/h5mkgrp_single_latest.h5" with sec2 driver.
+Opened "h5mkgrp_single_l.h5" with sec2 driver.
 /                        Group
     Location:  1:48
     Links:     1
diff --git a/tools/testfiles/h5mkgrp_single_p.ls b/tools/testfiles/h5mkgrp_single_p.ls
new file mode 100644
index 0000000..e82dc31
--- /dev/null
+++ b/tools/testfiles/h5mkgrp_single_p.ls
@@ -0,0 +1,7 @@
+Opened "h5mkgrp_single_p.h5" with sec2 driver.
+/                        Group
+    Location:  1:96
+    Links:     1
+/single                  Group
+    Location:  1:800
+    Links:     1
diff --git a/tools/testfiles/h5mkgrp_single_v.ls b/tools/testfiles/h5mkgrp_single_v.ls
new file mode 100644
index 0000000..7360865
--- /dev/null
+++ b/tools/testfiles/h5mkgrp_single_v.ls
@@ -0,0 +1,7 @@
+Opened "h5mkgrp_single_v.h5" with sec2 driver.
+/                        Group
+    Location:  1:96
+    Links:     1
+/single                  Group
+    Location:  1:800
+    Links:     1
diff --git a/tools/testfiles/h5mkgrp_version.ls b/tools/testfiles/h5mkgrp_version.ls
deleted file mode 100644
index 907f0ad..0000000
--- a/tools/testfiles/h5mkgrp_version.ls
+++ /dev/null
@@ -1,4 +0,0 @@
-#############################
-Expected output for 'h5ls ../testfiles/h5mkgrp_version.h5'
-#############################
-../testfiles/h5mkgrp_version.h5: unable to open file