[svn-r20504] Purpose:

    General shared library improvements for CYGWIN / AIX

Description:

    Shared libraries are disabled on both CYGWIN and AIX due
    to inability to build them correctly. Part of the problem
    in both of these situations is the lack of the libtool
    flag -no-undefined, which tells libtool that all needed
    symbols are defined at link time (a requirement on these
    systems) and that it's okay to build shared libraries.

    Another problem are lack of dependencies between wrapper
    libraries and core C HDF5 library.

    This patch addresses both of these by fixing configure to
    add in -no-undefined flag for libtool during linking and
    adds automake dependencies in the Makefile.am files.

    After testing, both CYGWIN and AIX now generate shared
    libraries, but there are still some test failures in each.
    (cache_api, dt_arith, and testerror.sh on CYGWIN, and
    fortran tests on AIX).

    Even though the shared libraries are not quite perfect,
    this is a general improvement to what we had before, so
    I'm applying the patch anyways. Note that default behavior
    of shared libraries on these systems being disabled has
    NOT been changed and requires the use of the
    --enable-unsupported to attempt to build them.

    We will need to address the test failures in each
    architecture prior to formally supporting shared
    libraries on each.

Tested:

    h5committested & CYGWIN tested (on bangan)
    (AIX tested by Albert on bp-login2)

11 files changed, 44 insertions, 11 deletions

diff --git a/tools/Makefile.in b/tools/Makefile.in
index 904291c..302a64d 100644
--- a/tools/Makefile.in
+++ b/tools/Makefile.in
@@ -122,14 +122,16 @@ AMTAR = @AMTAR@
 # but which should not be exported to h5cc for building other programs.
 # AM_CFLAGS is an automake construct which should be used by Makefiles 
 # instead of CFLAGS, as CFLAGS is reserved solely for the user to define.
+# This applies to FCFLAGS, CXXFLAGS, CPPFLAGS, and LDFLAGS as well.
 AM_CFLAGS = @AM_CFLAGS@ @H5_CFLAGS@
 AM_CPPFLAGS = @AM_CPPFLAGS@ @H5_CPPFLAGS@
 AM_CXXFLAGS = @AM_CXXFLAGS@ @H5_CXXFLAGS@
 AM_DEFAULT_VERBOSITY = @AM_DEFAULT_VERBOSITY@
 AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@
-AM_LDFLAGS = @AM_LDFLAGS@
+AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@
 AM_MAKEFLAGS = @AM_MAKEFLAGS@
 AR = @AR@
+AS = @AS@
 
 # Set the paths for AFS installs of autotools for Linux machines
 # Ideally, these tools should never be needed during the build.
@@ -192,6 +194,7 @@ H5_CXXFLAGS = @H5_CXXFLAGS@
 H5_CXX_SHARED = @H5_CXX_SHARED@
 H5_FCFLAGS = @H5_FCFLAGS@
 H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@
+H5_LDFLAGS = @H5_LDFLAGS@
 H5_LONE_COLON = @H5_LONE_COLON@
 H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
diff --git a/tools/h5copy/Makefile.in b/tools/h5copy/Makefile.in
index 1ffb045..5a300aa 100644
--- a/tools/h5copy/Makefile.in
+++ b/tools/h5copy/Makefile.in
@@ -124,14 +124,16 @@ AMTAR = @AMTAR@
 # but which should not be exported to h5cc for building other programs.
 # AM_CFLAGS is an automake construct which should be used by Makefiles 
 # instead of CFLAGS, as CFLAGS is reserved solely for the user to define.
+# This applies to FCFLAGS, CXXFLAGS, CPPFLAGS, and LDFLAGS as well.
 AM_CFLAGS = @AM_CFLAGS@ @H5_CFLAGS@
 AM_CPPFLAGS = @AM_CPPFLAGS@ @H5_CPPFLAGS@
 AM_CXXFLAGS = @AM_CXXFLAGS@ @H5_CXXFLAGS@
 AM_DEFAULT_VERBOSITY = @AM_DEFAULT_VERBOSITY@
 AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@
-AM_LDFLAGS = @AM_LDFLAGS@
+AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@
 AM_MAKEFLAGS = @AM_MAKEFLAGS@
 AR = @AR@
+AS = @AS@
 
 # Set the paths for AFS installs of autotools for Linux machines
 # Ideally, these tools should never be needed during the build.
@@ -194,6 +196,7 @@ H5_CXXFLAGS = @H5_CXXFLAGS@
 H5_CXX_SHARED = @H5_CXX_SHARED@
 H5_FCFLAGS = @H5_FCFLAGS@
 H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@
+H5_LDFLAGS = @H5_LDFLAGS@
 H5_LONE_COLON = @H5_LONE_COLON@
 H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
diff --git a/tools/h5diff/Makefile.in b/tools/h5diff/Makefile.in
index 14ce0a9..55d7802 100644
--- a/tools/h5diff/Makefile.in
+++ b/tools/h5diff/Makefile.in
@@ -131,14 +131,16 @@ AMTAR = @AMTAR@
 # but which should not be exported to h5cc for building other programs.
 # AM_CFLAGS is an automake construct which should be used by Makefiles 
 # instead of CFLAGS, as CFLAGS is reserved solely for the user to define.
+# This applies to FCFLAGS, CXXFLAGS, CPPFLAGS, and LDFLAGS as well.
 AM_CFLAGS = @AM_CFLAGS@ @H5_CFLAGS@
 AM_CPPFLAGS = @AM_CPPFLAGS@ @H5_CPPFLAGS@
 AM_CXXFLAGS = @AM_CXXFLAGS@ @H5_CXXFLAGS@
 AM_DEFAULT_VERBOSITY = @AM_DEFAULT_VERBOSITY@
 AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@
-AM_LDFLAGS = @AM_LDFLAGS@
+AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@
 AM_MAKEFLAGS = @AM_MAKEFLAGS@
 AR = @AR@
+AS = @AS@
 
 # Set the paths for AFS installs of autotools for Linux machines
 # Ideally, these tools should never be needed during the build.
@@ -201,6 +203,7 @@ H5_CXXFLAGS = @H5_CXXFLAGS@
 H5_CXX_SHARED = @H5_CXX_SHARED@
 H5_FCFLAGS = @H5_FCFLAGS@
 H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@
+H5_LDFLAGS = @H5_LDFLAGS@
 H5_LONE_COLON = @H5_LONE_COLON@
 H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
diff --git a/tools/h5dump/Makefile.in b/tools/h5dump/Makefile.in
index 0829485..57e66a2 100644
--- a/tools/h5dump/Makefile.in
+++ b/tools/h5dump/Makefile.in
@@ -129,14 +129,16 @@ AMTAR = @AMTAR@
 # but which should not be exported to h5cc for building other programs.
 # AM_CFLAGS is an automake construct which should be used by Makefiles 
 # instead of CFLAGS, as CFLAGS is reserved solely for the user to define.
+# This applies to FCFLAGS, CXXFLAGS, CPPFLAGS, and LDFLAGS as well.
 AM_CFLAGS = @AM_CFLAGS@ @H5_CFLAGS@
 AM_CPPFLAGS = @AM_CPPFLAGS@ @H5_CPPFLAGS@
 AM_CXXFLAGS = @AM_CXXFLAGS@ @H5_CXXFLAGS@
 AM_DEFAULT_VERBOSITY = @AM_DEFAULT_VERBOSITY@
 AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@
-AM_LDFLAGS = @AM_LDFLAGS@
+AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@
 AM_MAKEFLAGS = @AM_MAKEFLAGS@
 AR = @AR@
+AS = @AS@
 
 # Set the paths for AFS installs of autotools for Linux machines
 # Ideally, these tools should never be needed during the build.
@@ -199,6 +201,7 @@ H5_CXXFLAGS = @H5_CXXFLAGS@
 H5_CXX_SHARED = @H5_CXX_SHARED@
 H5_FCFLAGS = @H5_FCFLAGS@
 H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@
+H5_LDFLAGS = @H5_LDFLAGS@
 H5_LONE_COLON = @H5_LONE_COLON@
 H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
diff --git a/tools/h5import/Makefile.in b/tools/h5import/Makefile.in
index ed70ffe..8867bd0 100755
--- a/tools/h5import/Makefile.in
+++ b/tools/h5import/Makefile.in
@@ -124,14 +124,16 @@ AMTAR = @AMTAR@
 # but which should not be exported to h5cc for building other programs.
 # AM_CFLAGS is an automake construct which should be used by Makefiles 
 # instead of CFLAGS, as CFLAGS is reserved solely for the user to define.
+# This applies to FCFLAGS, CXXFLAGS, CPPFLAGS, and LDFLAGS as well.
 AM_CFLAGS = @AM_CFLAGS@ @H5_CFLAGS@
 AM_CPPFLAGS = @AM_CPPFLAGS@ @H5_CPPFLAGS@
 AM_CXXFLAGS = @AM_CXXFLAGS@ @H5_CXXFLAGS@
 AM_DEFAULT_VERBOSITY = @AM_DEFAULT_VERBOSITY@
 AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@
-AM_LDFLAGS = @AM_LDFLAGS@
+AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@
 AM_MAKEFLAGS = @AM_MAKEFLAGS@
 AR = @AR@
+AS = @AS@
 
 # Set the paths for AFS installs of autotools for Linux machines
 # Ideally, these tools should never be needed during the build.
@@ -194,6 +196,7 @@ H5_CXXFLAGS = @H5_CXXFLAGS@
 H5_CXX_SHARED = @H5_CXX_SHARED@
 H5_FCFLAGS = @H5_FCFLAGS@
 H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@
+H5_LDFLAGS = @H5_LDFLAGS@
 H5_LONE_COLON = @H5_LONE_COLON@
 H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
diff --git a/tools/h5jam/Makefile.in b/tools/h5jam/Makefile.in
index dadcc42..78e446d 100644
--- a/tools/h5jam/Makefile.in
+++ b/tools/h5jam/Makefile.in
@@ -138,14 +138,16 @@ AMTAR = @AMTAR@
 # but which should not be exported to h5cc for building other programs.
 # AM_CFLAGS is an automake construct which should be used by Makefiles 
 # instead of CFLAGS, as CFLAGS is reserved solely for the user to define.
+# This applies to FCFLAGS, CXXFLAGS, CPPFLAGS, and LDFLAGS as well.
 AM_CFLAGS = @AM_CFLAGS@ @H5_CFLAGS@
 AM_CPPFLAGS = @AM_CPPFLAGS@ @H5_CPPFLAGS@
 AM_CXXFLAGS = @AM_CXXFLAGS@ @H5_CXXFLAGS@
 AM_DEFAULT_VERBOSITY = @AM_DEFAULT_VERBOSITY@
 AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@
-AM_LDFLAGS = @AM_LDFLAGS@
+AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@
 AM_MAKEFLAGS = @AM_MAKEFLAGS@
 AR = @AR@
+AS = @AS@
 
 # Set the paths for AFS installs of autotools for Linux machines
 # Ideally, these tools should never be needed during the build.
@@ -208,6 +210,7 @@ H5_CXXFLAGS = @H5_CXXFLAGS@
 H5_CXX_SHARED = @H5_CXX_SHARED@
 H5_FCFLAGS = @H5_FCFLAGS@
 H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@
+H5_LDFLAGS = @H5_LDFLAGS@
 H5_LONE_COLON = @H5_LONE_COLON@
 H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
diff --git a/tools/h5ls/Makefile.in b/tools/h5ls/Makefile.in
index debd1d8..0912c71 100644
--- a/tools/h5ls/Makefile.in
+++ b/tools/h5ls/Makefile.in
@@ -118,14 +118,16 @@ AMTAR = @AMTAR@
 # but which should not be exported to h5cc for building other programs.
 # AM_CFLAGS is an automake construct which should be used by Makefiles 
 # instead of CFLAGS, as CFLAGS is reserved solely for the user to define.
+# This applies to FCFLAGS, CXXFLAGS, CPPFLAGS, and LDFLAGS as well.
 AM_CFLAGS = @AM_CFLAGS@ @H5_CFLAGS@
 AM_CPPFLAGS = @AM_CPPFLAGS@ @H5_CPPFLAGS@
 AM_CXXFLAGS = @AM_CXXFLAGS@ @H5_CXXFLAGS@
 AM_DEFAULT_VERBOSITY = @AM_DEFAULT_VERBOSITY@
 AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@
-AM_LDFLAGS = @AM_LDFLAGS@
+AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@
 AM_MAKEFLAGS = @AM_MAKEFLAGS@
 AR = @AR@
+AS = @AS@
 
 # Set the paths for AFS installs of autotools for Linux machines
 # Ideally, these tools should never be needed during the build.
@@ -188,6 +190,7 @@ H5_CXXFLAGS = @H5_CXXFLAGS@
 H5_CXX_SHARED = @H5_CXX_SHARED@
 H5_FCFLAGS = @H5_FCFLAGS@
 H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@
+H5_LDFLAGS = @H5_LDFLAGS@
 H5_LONE_COLON = @H5_LONE_COLON@
 H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
diff --git a/tools/h5repack/Makefile.in b/tools/h5repack/Makefile.in
index 69430c8..0d067a1 100644
--- a/tools/h5repack/Makefile.in
+++ b/tools/h5repack/Makefile.in
@@ -138,14 +138,16 @@ AMTAR = @AMTAR@
 # but which should not be exported to h5cc for building other programs.
 # AM_CFLAGS is an automake construct which should be used by Makefiles 
 # instead of CFLAGS, as CFLAGS is reserved solely for the user to define.
+# This applies to FCFLAGS, CXXFLAGS, CPPFLAGS, and LDFLAGS as well.
 AM_CFLAGS = @AM_CFLAGS@ @H5_CFLAGS@
 AM_CPPFLAGS = @AM_CPPFLAGS@ @H5_CPPFLAGS@
 AM_CXXFLAGS = @AM_CXXFLAGS@ @H5_CXXFLAGS@
 AM_DEFAULT_VERBOSITY = @AM_DEFAULT_VERBOSITY@
 AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@
-AM_LDFLAGS = @AM_LDFLAGS@
+AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@
 AM_MAKEFLAGS = @AM_MAKEFLAGS@
 AR = @AR@
+AS = @AS@
 
 # Set the paths for AFS installs of autotools for Linux machines
 # Ideally, these tools should never be needed during the build.
@@ -208,6 +210,7 @@ H5_CXXFLAGS = @H5_CXXFLAGS@
 H5_CXX_SHARED = @H5_CXX_SHARED@
 H5_FCFLAGS = @H5_FCFLAGS@
 H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@
+H5_LDFLAGS = @H5_LDFLAGS@
 H5_LONE_COLON = @H5_LONE_COLON@
 H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
diff --git a/tools/h5stat/Makefile.in b/tools/h5stat/Makefile.in
index 86f073e..4e37025 100644
--- a/tools/h5stat/Makefile.in
+++ b/tools/h5stat/Makefile.in
@@ -147,14 +147,16 @@ AMTAR = @AMTAR@
 # but which should not be exported to h5cc for building other programs.
 # AM_CFLAGS is an automake construct which should be used by Makefiles 
 # instead of CFLAGS, as CFLAGS is reserved solely for the user to define.
+# This applies to FCFLAGS, CXXFLAGS, CPPFLAGS, and LDFLAGS as well.
 AM_CFLAGS = @AM_CFLAGS@ @H5_CFLAGS@
 AM_CPPFLAGS = @AM_CPPFLAGS@ @H5_CPPFLAGS@
 AM_CXXFLAGS = @AM_CXXFLAGS@ @H5_CXXFLAGS@
 AM_DEFAULT_VERBOSITY = @AM_DEFAULT_VERBOSITY@
 AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@
-AM_LDFLAGS = @AM_LDFLAGS@
+AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@
 AM_MAKEFLAGS = @AM_MAKEFLAGS@
 AR = @AR@
+AS = @AS@
 
 # Set the paths for AFS installs of autotools for Linux machines
 # Ideally, these tools should never be needed during the build.
@@ -217,6 +219,7 @@ H5_CXXFLAGS = @H5_CXXFLAGS@
 H5_CXX_SHARED = @H5_CXX_SHARED@
 H5_FCFLAGS = @H5_FCFLAGS@
 H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@
+H5_LDFLAGS = @H5_LDFLAGS@
 H5_LONE_COLON = @H5_LONE_COLON@
 H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
diff --git a/tools/lib/Makefile.in b/tools/lib/Makefile.in
index 8346826..ea898db 100644
--- a/tools/lib/Makefile.in
+++ b/tools/lib/Makefile.in
@@ -117,14 +117,16 @@ AMTAR = @AMTAR@
 # but which should not be exported to h5cc for building other programs.
 # AM_CFLAGS is an automake construct which should be used by Makefiles 
 # instead of CFLAGS, as CFLAGS is reserved solely for the user to define.
+# This applies to FCFLAGS, CXXFLAGS, CPPFLAGS, and LDFLAGS as well.
 AM_CFLAGS = @AM_CFLAGS@ @H5_CFLAGS@
 AM_CPPFLAGS = @AM_CPPFLAGS@ @H5_CPPFLAGS@
 AM_CXXFLAGS = @AM_CXXFLAGS@ @H5_CXXFLAGS@
 AM_DEFAULT_VERBOSITY = @AM_DEFAULT_VERBOSITY@
 AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@
-AM_LDFLAGS = @AM_LDFLAGS@
+AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@
 AM_MAKEFLAGS = @AM_MAKEFLAGS@
 AR = @AR@
+AS = @AS@
 
 # Set the paths for AFS installs of autotools for Linux machines
 # Ideally, these tools should never be needed during the build.
@@ -187,6 +189,7 @@ H5_CXXFLAGS = @H5_CXXFLAGS@
 H5_CXX_SHARED = @H5_CXX_SHARED@
 H5_FCFLAGS = @H5_FCFLAGS@
 H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@
+H5_LDFLAGS = @H5_LDFLAGS@
 H5_LONE_COLON = @H5_LONE_COLON@
 H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
diff --git a/tools/misc/Makefile.in b/tools/misc/Makefile.in
index 3e1f399..b761859 100644
--- a/tools/misc/Makefile.in
+++ b/tools/misc/Makefile.in
@@ -172,14 +172,16 @@ AMTAR = @AMTAR@
 # but which should not be exported to h5cc for building other programs.
 # AM_CFLAGS is an automake construct which should be used by Makefiles 
 # instead of CFLAGS, as CFLAGS is reserved solely for the user to define.
+# This applies to FCFLAGS, CXXFLAGS, CPPFLAGS, and LDFLAGS as well.
 AM_CFLAGS = @AM_CFLAGS@ @H5_CFLAGS@
 AM_CPPFLAGS = @AM_CPPFLAGS@ @H5_CPPFLAGS@
 AM_CXXFLAGS = @AM_CXXFLAGS@ @H5_CXXFLAGS@
 AM_DEFAULT_VERBOSITY = @AM_DEFAULT_VERBOSITY@
 AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@
-AM_LDFLAGS = @AM_LDFLAGS@
+AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@
 AM_MAKEFLAGS = @AM_MAKEFLAGS@
 AR = @AR@
+AS = @AS@
 
 # Set the paths for AFS installs of autotools for Linux machines
 # Ideally, these tools should never be needed during the build.
@@ -242,6 +244,7 @@ H5_CXXFLAGS = @H5_CXXFLAGS@
 H5_CXX_SHARED = @H5_CXX_SHARED@
 H5_FCFLAGS = @H5_FCFLAGS@
 H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@
+H5_LDFLAGS = @H5_LDFLAGS@
 H5_LONE_COLON = @H5_LONE_COLON@
 H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@