[svn-r10158] Purpose:

Automake version upgrade Description: Upgraded automake version from 1.6.2 to 1.9.5. Changed bin/reconfigure script to use automake 1.9.5. Changed configure.in and Makefiles to use new FCFLAGS and FC variables instead of FFLAGS and F9X. Automake and configure should now do the lion's share of the work supporting Fortran 9X; macros in acsite.m4 are now mostly unused (will be cleaned later). Altered how configure handles pmake; now root-level Makefile.in is processed by bin/reconfigure to have a .MAKEFLAGS target, since automake no longer allows us to define unused variables. Configure now always checks for C++ compiler even if it is not used, since automake thinks this is the Right Thing To Do and will break otherwise. Platforms tested: Sol, copper, heping, mir, sleipnir, eirene, pommier, kelgia, modi4.
author: James Laird <jlaird@hdfgroup.org> 2005-03-07 17:57:27 (GMT)
committer: James Laird <jlaird@hdfgroup.org> 2005-03-07 17:57:27 (GMT)
commit: 25df1908bc0430994cecc9f1415838f42fe0c816 (patch)
tree: bce2777e087cc7d547e7b644f908eff72282bb53 /tools
parent: 630b2901c53c66c837e39babe9da0c20020e5d4d (diff)
download: hdf5-25df1908bc0430994cecc9f1415838f42fe0c816.zip
hdf5-25df1908bc0430994cecc9f1415838f42fe0c816.tar.gz
hdf5-25df1908bc0430994cecc9f1415838f42fe0c816.tar.bz2
10 files changed, 2568 insertions, 1537 deletions
diff --git a/tools/Makefile.in b/tools/Makefile.in
index 4879bee..75cb4ff 100644
--- a/tools/Makefile.in
+++ b/tools/Makefile.in
@@ -1,8 +1,8 @@
-# Makefile.in generated by automake 1.6.3 from Makefile.am.
+# Makefile.in generated by automake 1.9.5 from Makefile.am.
 # @configure_input@
 
-# Copyright 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002
-# Free Software Foundation, Inc.
+# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
+# 2003, 2004, 2005  Free Software Foundation, Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -29,93 +29,114 @@
 #
 # Tools HDF5 Makefile(.in)
 #
-SHELL = @SHELL@
-
 srcdir = @srcdir@
 top_srcdir = @top_srcdir@
 VPATH = @srcdir@
-prefix = @prefix@
-exec_prefix = @exec_prefix@
-
-bindir = @bindir@
-sbindir = @sbindir@
-libexecdir = @libexecdir@
-datadir = @datadir@
-sysconfdir = @sysconfdir@
-sharedstatedir = @sharedstatedir@
-localstatedir = @localstatedir@
-libdir = @libdir@
-infodir = @infodir@
-mandir = @mandir@
-oldincludedir = /usr/include
 pkgdatadir = $(datadir)/@PACKAGE@
 pkglibdir = $(libdir)/@PACKAGE@
 pkgincludedir = $(includedir)/@PACKAGE@
 top_builddir = ..
-
 am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
 INSTALL = @INSTALL@
-INSTALL_PROGRAM = @INSTALL_PROGRAM@
-INSTALL_DATA = @INSTALL_DATA@
 install_sh_DATA = $(install_sh) -c -m 644
 install_sh_PROGRAM = $(install_sh) -c
 install_sh_SCRIPT = $(install_sh) -c
-INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_HEADER = $(INSTALL_DATA)
-transform = @program_transform_name@
+transform = $(program_transform_name)
 NORMAL_INSTALL = :
 PRE_INSTALL = :
 POST_INSTALL = :
 NORMAL_UNINSTALL = :
 PRE_UNINSTALL = :
 POST_UNINSTALL = :
-host_alias = @host_alias@
+build_triplet = @build@
 host_triplet = @host@
-
-EXEEXT = @EXEEXT@
-OBJEXT = @OBJEXT@
-PATH_SEPARATOR = @PATH_SEPARATOR@
-
-# Install directories that automake doesn't know about
-includedir = $(exec_prefix)/include
-
+DIST_COMMON = $(srcdir)/Makefile.am $(srcdir)/Makefile.in \
+	$(top_srcdir)/config/commence.am \
+	$(top_srcdir)/config/conclude.am
+subdir = tools
+ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
+am__aclocal_m4_deps = $(top_srcdir)/configure.in
+am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+	$(ACLOCAL_M4)
+mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
+CONFIG_HEADER = $(top_builddir)/src/H5config.h
+CONFIG_CLEAN_FILES =
+SOURCES =
+DIST_SOURCES =
+RECURSIVE_TARGETS = all-recursive check-recursive dvi-recursive \
+	html-recursive info-recursive install-data-recursive \
+	install-exec-recursive install-info-recursive \
+	install-recursive installcheck-recursive installdirs-recursive \
+	pdf-recursive ps-recursive uninstall-info-recursive \
+	uninstall-recursive
+ETAGS = etags
+CTAGS = ctags
+DIST_SUBDIRS = $(SUBDIRS)
+DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
 
 # Set the paths for autotools to be correct on heping.
 # Ideally, these tools should never be needed during the build.
 ACLOCAL = /usr/bin/aclocal
-AUTOCONF = /usr/local/autoconf-2.59/bin/autoconf
-AUTOMAKE = /usr/bin/automake
-AUTOHEADER = /usr/local/autoconf-2.59/bin/autoheader
 ADD_PARALLEL_FILES = @ADD_PARALLEL_FILES@
+AMDEP_FALSE = @AMDEP_FALSE@
+AMDEP_TRUE = @AMDEP_TRUE@
 AMTAR = @AMTAR@
 AM_MAKEFLAGS = @AM_MAKEFLAGS@
 AR = @AR@
-AS = @AS@
+AUTOCONF = /usr/local/autoconf-2.59/bin/autoconf
+AUTOHEADER = /usr/local/autoconf-2.59/bin/autoheader
+AUTOMAKE = /usr/bin/automake
 AWK = @AWK@
+BUILD_CXX_CONDITIONAL_FALSE = @BUILD_CXX_CONDITIONAL_FALSE@
+BUILD_CXX_CONDITIONAL_TRUE = @BUILD_CXX_CONDITIONAL_TRUE@
+BUILD_FORTRAN_CONDITIONAL_FALSE = @BUILD_FORTRAN_CONDITIONAL_FALSE@
+BUILD_FORTRAN_CONDITIONAL_TRUE = @BUILD_FORTRAN_CONDITIONAL_TRUE@
+BUILD_HDF5_HL_CONDITIONAL_FALSE = @BUILD_HDF5_HL_CONDITIONAL_FALSE@
+BUILD_HDF5_HL_CONDITIONAL_TRUE = @BUILD_HDF5_HL_CONDITIONAL_TRUE@
+BUILD_PABLO_CONDITIONAL_FALSE = @BUILD_PABLO_CONDITIONAL_FALSE@
+BUILD_PABLO_CONDITIONAL_TRUE = @BUILD_PABLO_CONDITIONAL_TRUE@
+BUILD_PARALLEL_CONDITIONAL_FALSE = @BUILD_PARALLEL_CONDITIONAL_FALSE@
+BUILD_PARALLEL_CONDITIONAL_TRUE = @BUILD_PARALLEL_CONDITIONAL_TRUE@
 BUILD_PDB2HDF = @BUILD_PDB2HDF@
+BUILD_PDB2HDF_CONDITIONAL_FALSE = @BUILD_PDB2HDF_CONDITIONAL_FALSE@
+BUILD_PDB2HDF_CONDITIONAL_TRUE = @BUILD_PDB2HDF_CONDITIONAL_TRUE@
 BYTESEX = @BYTESEX@
 CC = @CC@
+CCDEPMODE = @CCDEPMODE@
 CC_VERSION = @CC_VERSION@
+CFLAGS = @CFLAGS@
 CONFIG_DATE = @CONFIG_DATE@
 CONFIG_MODE = @CONFIG_MODE@
 CONFIG_USER = @CONFIG_USER@
+CPP = @CPP@
 CPPFLAGS = @CPPFLAGS@
 CXX = @CXX@
 CXXCPP = @CXXCPP@
+CXXDEPMODE = @CXXDEPMODE@
+CXXFLAGS = @CXXFLAGS@
+CYGPATH_W = @CYGPATH_W@
 DEBUG_PKG = @DEBUG_PKG@
+DEFS = @DEFS@
 DEPDIR = @DEPDIR@
-DLLTOOL = @DLLTOOL@
 DYNAMIC_DIRS = @DYNAMIC_DIRS@
 ECHO = @ECHO@
+ECHO_C = @ECHO_C@
+ECHO_N = @ECHO_N@
+ECHO_T = @ECHO_T@
 EGREP = @EGREP@
+EXEEXT = @EXEEXT@
 F77 = @F77@
+
+# Make sure that these variables are exported to the Makefiles
+F9XMODEXT = @F9XMODEXT@
+F9XMODFLAG = @F9XMODFLAG@
 F9XSUFFIXFLAG = @F9XSUFFIXFLAG@
 FC = @FC@
+FCFLAGS = @FCFLAGS@
 FFLAGS = @FFLAGS@
 FILTERS = @FILTERS@
 FSEARCH_DIRS = @FSEARCH_DIRS@
-GCJ = @GCJ@
-GCJFLAGS = @GCJFLAGS@
 H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
 HDF5_INTERFACES = @HDF5_INTERFACES@
@@ -125,21 +146,36 @@ HL_FOR = @HL_FOR@
 HSIZET = @HSIZET@
 HSIZE_T = @HSIZE_T@
 HSSIZE_T = @HSSIZE_T@
+INSTALL_DATA = @INSTALL_DATA@
+INSTALL_PROGRAM = @INSTALL_PROGRAM@
+INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
 INSTRUMENT_LIBRARY = @INSTRUMENT_LIBRARY@
+LDFLAGS = @LDFLAGS@
+LIBOBJS = @LIBOBJS@
+LIBS = @LIBS@
 LIBTOOL = @LIBTOOL@
 LN_S = @LN_S@
+LTLIBOBJS = @LTLIBOBJS@
 LT_STATIC_EXEC = @LT_STATIC_EXEC@
 MAINT = @MAINT@
+MAINTAINER_MODE_FALSE = @MAINTAINER_MODE_FALSE@
+MAINTAINER_MODE_TRUE = @MAINTAINER_MODE_TRUE@
+MAKEINFO = @MAKEINFO@
 MPE = @MPE@
-OBJDUMP = @OBJDUMP@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
+OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
+PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@
+PACKAGE_NAME = @PACKAGE_NAME@
+PACKAGE_STRING = @PACKAGE_STRING@
+PACKAGE_TARNAME = @PACKAGE_TARNAME@
+PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
+PATH_SEPARATOR = @PATH_SEPARATOR@
 PERL = @PERL@
 PTHREAD = @PTHREAD@
 RANLIB = @RANLIB@
-RC = @RC@
 ROOT = @ROOT@
 RUNPARALLEL = @RUNPARALLEL@
 RUNSERIAL = @RUNSERIAL@
@@ -147,6 +183,8 @@ R_INTEGER = @R_INTEGER@
 R_LARGE = @R_LARGE@
 SEARCH = @SEARCH@
 SETX = @SETX@
+SET_MAKE = @SET_MAKE@
+SHELL = @SHELL@
 SIZE_T = @SIZE_T@
 SRB = @SRB@
 STATIC_SHARED = @STATIC_SHARED@
@@ -161,9 +199,52 @@ USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@
 USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@
 USE_FILTER_SZIP = @USE_FILTER_SZIP@
 VERSION = @VERSION@
+ac_ct_AR = @ac_ct_AR@
+ac_ct_CC = @ac_ct_CC@
+ac_ct_CXX = @ac_ct_CXX@
+ac_ct_F77 = @ac_ct_F77@
+ac_ct_FC = @ac_ct_FC@
+ac_ct_RANLIB = @ac_ct_RANLIB@
+ac_ct_STRIP = @ac_ct_STRIP@
+am__fastdepCC_FALSE = @am__fastdepCC_FALSE@
+am__fastdepCC_TRUE = @am__fastdepCC_TRUE@
+am__fastdepCXX_FALSE = @am__fastdepCXX_FALSE@
+am__fastdepCXX_TRUE = @am__fastdepCXX_TRUE@
 am__include = @am__include@
+am__leading_dot = @am__leading_dot@
 am__quote = @am__quote@
+am__tar = @am__tar@
+am__untar = @am__untar@
+bindir = @bindir@
+build = @build@
+build_alias = @build_alias@
+build_cpu = @build_cpu@
+build_os = @build_os@
+build_vendor = @build_vendor@
+datadir = @datadir@
+exec_prefix = @exec_prefix@
+host = @host@
+host_alias = @host_alias@
+host_cpu = @host_cpu@
+host_os = @host_os@
+host_vendor = @host_vendor@
+
+# Install directories that automake doesn't know about
+includedir = $(exec_prefix)/include
+infodir = @infodir@
 install_sh = @install_sh@
+libdir = @libdir@
+libexecdir = @libexecdir@
+localstatedir = @localstatedir@
+mandir = @mandir@
+mkdir_p = @mkdir_p@
+oldincludedir = @oldincludedir@
+prefix = @prefix@
+program_transform_name = @program_transform_name@
+sbindir = @sbindir@
+sharedstatedir = @sharedstatedir@
+sysconfdir = @sysconfdir@
+target_alias = @target_alias@
 
 # Shell commands used in Makefiles
 RM = rm -f
@@ -186,10 +267,6 @@ H5CC_PP = $(bindir)/h5pcc
 H5FC = $(bindir)/h5fc
 H5FC_PP = $(bindir)/h5pfc
 
-# Make sure that these variables are exported to the Makefiles
-F9XMODEXT = @F9XMODEXT@
-F9XMODFLAG = @F9XMODFLAG@
-
 # All subdirectories
 SUBDIRS = lib h5dump h5diff h5ls misc gifconv h5import h5repack h5jam
 
@@ -205,26 +282,38 @@ PROGS = $(bin_PROGRAMS) $(bin_SCRIPTS) $(noinst_PROGRAMS) $(noinst_SCRIPTS)   \
         $(EXTRA_PROG)
 
 TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST) 
-subdir = tools
-mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
-CONFIG_HEADER = $(top_builddir)/src/H5config.h
-CONFIG_CLEAN_FILES =
-DIST_SOURCES =
-
-RECURSIVE_TARGETS = info-recursive dvi-recursive install-info-recursive \
-	uninstall-info-recursive all-recursive install-data-recursive \
-	install-exec-recursive installdirs-recursive install-recursive \
-	uninstall-recursive check-recursive installcheck-recursive
-DIST_COMMON = Makefile.am Makefile.in
-DIST_SUBDIRS = $(SUBDIRS)
 all: all-recursive
 
 .SUFFIXES:
-$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(top_srcdir)/configure.in $(ACLOCAL_M4)
+$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(am__configure_deps)
+	@for dep in $?; do \
+	  case '$(am__configure_deps)' in \
+	    *$$dep*) \
+	      cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh \
+		&& exit 0; \
+	      exit 1;; \
+	  esac; \
+	done; \
+	echo ' cd $(top_srcdir) && $(AUTOMAKE) --foreign  tools/Makefile'; \
 	cd $(top_srcdir) && \
 	  $(AUTOMAKE) --foreign  tools/Makefile
-Makefile: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.in  $(top_builddir)/config.status
-	cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)
+.PRECIOUS: Makefile
+Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+	@case '$?' in \
+	  *config.status*) \
+	    cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh;; \
+	  *) \
+	    echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)'; \
+	    cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe);; \
+	esac;
+
+$(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+
+$(top_srcdir)/configure: @MAINTAINER_MODE_TRUE@ $(am__configure_deps)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+$(ACLOCAL_M4): @MAINTAINER_MODE_TRUE@ $(am__aclocal_m4_deps)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
 
 mostlyclean-libtool:
 	-rm -f *.lo
@@ -243,7 +332,13 @@ uninstall-info-am:
 #     (which will cause the Makefiles to be regenerated when you run `make');
 # (2) otherwise, pass the desired values on the `make' command line.
 $(RECURSIVE_TARGETS):
-	@set fnord $$MAKEFLAGS; amf=$$2; \
+	@failcom='exit 1'; \
+	for f in x $$MAKEFLAGS; do \
+	  case $$f in \
+	    *=* | --[!k]*);; \
+	    *k*) failcom='fail=yes';; \
+	  esac; \
+	done; \
 	dot_seen=no; \
 	target=`echo $@ | sed s/-recursive//`; \
 	list='$(SUBDIRS)'; for subdir in $$list; do \
@@ -255,7 +350,7 @@ $(RECURSIVE_TARGETS):
 	    local_target="$$target"; \
 	  fi; \
 	  (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) $$local_target) \
-	   || case "$$amf" in *=*) exit 1;; *k*) fail=yes;; *) exit 1;; esac; \
+	  || eval $$failcom; \
 	done; \
 	if test "$$dot_seen" = "no"; then \
 	  $(MAKE) $(AM_MAKEFLAGS) "$$target-am" || exit 1; \
@@ -263,7 +358,13 @@ $(RECURSIVE_TARGETS):
 
 mostlyclean-recursive clean-recursive distclean-recursive \
 maintainer-clean-recursive:
-	@set fnord $$MAKEFLAGS; amf=$$2; \
+	@failcom='exit 1'; \
+	for f in x $$MAKEFLAGS; do \
+	  case $$f in \
+	    *=* | --[!k]*);; \
+	    *k*) failcom='fail=yes';; \
+	  esac; \
+	done; \
 	dot_seen=no; \
 	case "$@" in \
 	  distclean-* | maintainer-clean-*) list='$(DIST_SUBDIRS)' ;; \
@@ -284,17 +385,16 @@ maintainer-clean-recursive:
 	    local_target="$$target"; \
 	  fi; \
 	  (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) $$local_target) \
-	   || case "$$amf" in *=*) exit 1;; *k*) fail=yes;; *) exit 1;; esac; \
+	  || eval $$failcom; \
 	done && test -z "$$fail"
 tags-recursive:
 	list='$(SUBDIRS)'; for subdir in $$list; do \
 	  test "$$subdir" = . || (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) tags); \
 	done
-
-ETAGS = etags
-ETAGSFLAGS =
-
-tags: TAGS
+ctags-recursive:
+	list='$(SUBDIRS)'; for subdir in $$list; do \
+	  test "$$subdir" = . || (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) ctags); \
+	done
 
 ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \
@@ -304,14 +404,23 @@ ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	  $(AWK) '    { files[$$0] = 1; } \
 	       END { for (i in files) print i; }'`; \
 	mkid -fID $$unique
+tags: TAGS
 
 TAGS: tags-recursive $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
 	tags=; \
 	here=`pwd`; \
+	if ($(ETAGS) --etags-include --version) >/dev/null 2>&1; then \
+	  include_option=--etags-include; \
+	  empty_fix=.; \
+	else \
+	  include_option=--include; \
+	  empty_fix=; \
+	fi; \
 	list='$(SUBDIRS)'; for subdir in $$list; do \
 	  if test "$$subdir" = .; then :; else \
-	    test -f $$subdir/TAGS && tags="$$tags -i $$here/$$subdir/TAGS"; \
+	    test ! -f $$subdir/TAGS || \
+	      tags="$$tags $$include_option=$$here/$$subdir/TAGS"; \
 	  fi; \
 	done; \
 	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
@@ -320,8 +429,24 @@ TAGS: tags-recursive $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 	  done | \
 	  $(AWK) '    { files[$$0] = 1; } \
 	       END { for (i in files) print i; }'`; \
-	test -z "$(ETAGS_ARGS)$$tags$$unique" \
-	  || $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
+	  test -n "$$unique" || unique=$$empty_fix; \
+	  $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	    $$tags $$unique; \
+	fi
+ctags: CTAGS
+CTAGS: ctags-recursive $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
+		$(TAGS_FILES) $(LISP)
+	tags=; \
+	here=`pwd`; \
+	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
+	unique=`for i in $$list; do \
+	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
+	  done | \
+	  $(AWK) '    { files[$$0] = 1; } \
+	       END { for (i in files) print i; }'`; \
+	test -z "$(CTAGS_ARGS)$$tags$$unique" \
+	  || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
 	     $$tags $$unique
 
 GTAGS:
@@ -330,19 +455,22 @@ GTAGS:
 	  && gtags -i $(GTAGS_ARGS) $$here
 
 distclean-tags:
-	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH
-DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
-
-top_distdir = ..
-distdir = $(top_distdir)/$(PACKAGE)-$(VERSION)
+	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
 
 distdir: $(DISTFILES)
-	@list='$(DISTFILES)'; for file in $$list; do \
+	$(mkdir_p) $(distdir)/../config
+	@srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`; \
+	topsrcdirstrip=`echo "$(top_srcdir)" | sed 's|.|.|g'`; \
+	list='$(DISTFILES)'; for file in $$list; do \
+	  case $$file in \
+	    $(srcdir)/*) file=`echo "$$file" | sed "s|^$$srcdirstrip/||"`;; \
+	    $(top_srcdir)/*) file=`echo "$$file" | sed "s|^$$topsrcdirstrip/|$(top_builddir)/|"`;; \
+	  esac; \
 	  if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
 	  dir=`echo "$$file" | sed -e 's,/[^/]*$$,,'`; \
 	  if test "$$dir" != "$$file" && test "$$dir" != "."; then \
 	    dir="/$$dir"; \
-	    $(mkinstalldirs) "$(distdir)$$dir"; \
+	    $(mkdir_p) "$(distdir)$$dir"; \
 	  else \
 	    dir=''; \
 	  fi; \
@@ -357,15 +485,17 @@ distdir: $(DISTFILES)
 	    || exit 1; \
 	  fi; \
 	done
-	list='$(SUBDIRS)'; for subdir in $$list; do \
+	list='$(DIST_SUBDIRS)'; for subdir in $$list; do \
 	  if test "$$subdir" = .; then :; else \
-	    test -d $(distdir)/$$subdir \
-	    || mkdir $(distdir)/$$subdir \
+	    test -d "$(distdir)/$$subdir" \
+	    || $(mkdir_p) "$(distdir)/$$subdir" \
 	    || exit 1; \
+	    distdir=`$(am__cd) $(distdir) && pwd`; \
+	    top_distdir=`$(am__cd) $(top_distdir) && pwd`; \
 	    (cd $$subdir && \
 	      $(MAKE) $(AM_MAKEFLAGS) \
-	        top_distdir="$(top_distdir)" \
-	        distdir=../$(distdir)/$$subdir \
+	        top_distdir="$$top_distdir" \
+	        distdir="$$distdir/$$subdir" \
 	        distdir) \
 	      || exit 1; \
 	  fi; \
@@ -376,7 +506,6 @@ check: check-recursive
 all-am: Makefile all-local
 installdirs: installdirs-recursive
 installdirs-am:
-
 install: install-recursive
 install-exec: install-exec-recursive
 install-data: install-data-recursive
@@ -388,7 +517,7 @@ install-am: all-am
 installcheck: installcheck-recursive
 install-strip:
 	$(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
-	  INSTALL_STRIP_FLAG=-s \
+	  install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
 	  `test -z '$(STRIP)' || \
 	    echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install
 mostlyclean-generic:
@@ -396,7 +525,7 @@ mostlyclean-generic:
 clean-generic:
 
 distclean-generic:
-	-rm -f Makefile $(CONFIG_CLEAN_FILES)
+	-test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
 
 maintainer-clean-generic:
 	@echo "This command is intended for maintainers to use"
@@ -406,7 +535,7 @@ clean: clean-recursive
 clean-am: clean-generic clean-libtool mostlyclean-am
 
 distclean: distclean-recursive
-
+	-rm -f Makefile
 distclean-am: clean-am distclean-generic distclean-libtool \
 	distclean-tags
 
@@ -414,6 +543,8 @@ dvi: dvi-recursive
 
 dvi-am:
 
+html: html-recursive
+
 info: info-recursive
 
 info-am:
@@ -429,32 +560,37 @@ install-man:
 installcheck-am:
 
 maintainer-clean: maintainer-clean-recursive
-
+	-rm -f Makefile
 maintainer-clean-am: distclean-am maintainer-clean-generic
 
 mostlyclean: mostlyclean-recursive
 
 mostlyclean-am: mostlyclean-generic mostlyclean-libtool
 
+pdf: pdf-recursive
+
+pdf-am:
+
+ps: ps-recursive
+
+ps-am:
+
 uninstall-am: uninstall-info-am
 
 uninstall-info: uninstall-info-recursive
 
-.PHONY: $(RECURSIVE_TARGETS) GTAGS all all-am all-local check \
+.PHONY: $(RECURSIVE_TARGETS) CTAGS GTAGS all all-am all-local check \
 	check-TESTS check-am clean clean-generic clean-libtool \
-	clean-recursive distclean distclean-generic distclean-libtool \
-	distclean-recursive distclean-tags distdir dvi dvi-am \
-	dvi-recursive info info-am info-recursive install install-am \
-	install-data install-data-am install-data-recursive \
-	install-exec install-exec-am install-exec-recursive \
-	install-info install-info-am install-info-recursive install-man \
-	install-recursive install-strip installcheck installcheck-am \
-	installdirs installdirs-am installdirs-recursive \
-	maintainer-clean maintainer-clean-generic \
+	clean-recursive ctags ctags-recursive distclean \
+	distclean-generic distclean-libtool distclean-recursive \
+	distclean-tags distdir dvi dvi-am html html-am info info-am \
+	install install-am install-data install-data-am install-exec \
+	install-exec-am install-info install-info-am install-man \
+	install-strip installcheck installcheck-am installdirs \
+	installdirs-am maintainer-clean maintainer-clean-generic \
 	maintainer-clean-recursive mostlyclean mostlyclean-generic \
-	mostlyclean-libtool mostlyclean-recursive tags tags-recursive \
-	uninstall uninstall-am uninstall-info-am \
-	uninstall-info-recursive uninstall-recursive
+	mostlyclean-libtool mostlyclean-recursive pdf pdf-am ps ps-am \
+	tags tags-recursive uninstall uninstall-am uninstall-info-am
 
 
 # lib/progs/tests targets recurse into subdirectories. build-* targets
diff --git a/tools/gifconv/Makefile.in b/tools/gifconv/Makefile.in
index 26dc843..37d0d50 100644
--- a/tools/gifconv/Makefile.in
+++ b/tools/gifconv/Makefile.in
@@ -1,8 +1,8 @@
-# Makefile.in generated by automake 1.6.3 from Makefile.am.
+# Makefile.in generated by automake 1.9.5 from Makefile.am.
 # @configure_input@
 
-# Copyright 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002
-# Free Software Foundation, Inc.
+# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
+# 2003, 2004, 2005  Free Software Foundation, Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -29,93 +29,137 @@
 #
 # HDF5 Library Makefile(.in)
 #
-SHELL = @SHELL@
+
+SOURCES = $(gif2h5_SOURCES) $(h52gif_SOURCES)
 
 srcdir = @srcdir@
 top_srcdir = @top_srcdir@
 VPATH = @srcdir@
-prefix = @prefix@
-exec_prefix = @exec_prefix@
-
-bindir = @bindir@
-sbindir = @sbindir@
-libexecdir = @libexecdir@
-datadir = @datadir@
-sysconfdir = @sysconfdir@
-sharedstatedir = @sharedstatedir@
-localstatedir = @localstatedir@
-libdir = @libdir@
-infodir = @infodir@
-mandir = @mandir@
-oldincludedir = /usr/include
 pkgdatadir = $(datadir)/@PACKAGE@
 pkglibdir = $(libdir)/@PACKAGE@
 pkgincludedir = $(includedir)/@PACKAGE@
 top_builddir = ../..
-
 am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
 INSTALL = @INSTALL@
-INSTALL_PROGRAM = @INSTALL_PROGRAM@
-INSTALL_DATA = @INSTALL_DATA@
 install_sh_DATA = $(install_sh) -c -m 644
 install_sh_PROGRAM = $(install_sh) -c
 install_sh_SCRIPT = $(install_sh) -c
-INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_HEADER = $(INSTALL_DATA)
-transform = @program_transform_name@
+transform = $(program_transform_name)
 NORMAL_INSTALL = :
 PRE_INSTALL = :
 POST_INSTALL = :
 NORMAL_UNINSTALL = :
 PRE_UNINSTALL = :
 POST_UNINSTALL = :
-host_alias = @host_alias@
+build_triplet = @build@
 host_triplet = @host@
-
-EXEEXT = @EXEEXT@
-OBJEXT = @OBJEXT@
-PATH_SEPARATOR = @PATH_SEPARATOR@
-
-# Install directories that automake doesn't know about
-includedir = $(exec_prefix)/include
-
+DIST_COMMON = $(srcdir)/Makefile.am $(srcdir)/Makefile.in \
+	$(top_srcdir)/config/commence.am \
+	$(top_srcdir)/config/conclude.am
+bin_PROGRAMS = gif2h5$(EXEEXT) h52gif$(EXEEXT)
+subdir = tools/gifconv
+ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
+am__aclocal_m4_deps = $(top_srcdir)/configure.in
+am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+	$(ACLOCAL_M4)
+mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
+CONFIG_HEADER = $(top_builddir)/src/H5config.h
+CONFIG_CLEAN_FILES =
+am__installdirs = "$(DESTDIR)$(bindir)"
+binPROGRAMS_INSTALL = $(INSTALL_PROGRAM)
+PROGRAMS = $(bin_PROGRAMS)
+am_gif2h5_OBJECTS = gif2hdf.$(OBJEXT) gif2mem.$(OBJEXT) \
+	decompress.$(OBJEXT) gifread.$(OBJEXT) writehdf.$(OBJEXT)
+gif2h5_OBJECTS = $(am_gif2h5_OBJECTS)
+gif2h5_LDADD = $(LDADD)
+am__DEPENDENCIES_1 = $(top_builddir)/src/libhdf5.la
+am__DEPENDENCIES_2 = $(top_builddir)/tools/lib/libh5tools.la
+gif2h5_DEPENDENCIES = $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_2)
+am_h52gif_OBJECTS = hdf2gif.$(OBJEXT) hdfgifwr.$(OBJEXT) \
+	readhdf.$(OBJEXT)
+h52gif_OBJECTS = $(am_h52gif_OBJECTS)
+h52gif_LDADD = $(LDADD)
+h52gif_DEPENDENCIES = $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_2)
+DEFAULT_INCLUDES = -I. -I$(srcdir) -I$(top_builddir)/src
+depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
+am__depfiles_maybe = depfiles
+COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
+	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
+LTCOMPILE = $(LIBTOOL) --tag=CC --mode=compile $(CC) $(DEFS) \
+	$(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
+	$(AM_CFLAGS) $(CFLAGS)
+CCLD = $(CC)
+LINK = $(LIBTOOL) --tag=CC --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
+	$(AM_LDFLAGS) $(LDFLAGS) -o $@
+SOURCES = $(gif2h5_SOURCES) $(h52gif_SOURCES)
+DIST_SOURCES = $(gif2h5_SOURCES) $(h52gif_SOURCES)
+ETAGS = etags
+CTAGS = ctags
+DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
 
 # Set the paths for autotools to be correct on heping.
 # Ideally, these tools should never be needed during the build.
 ACLOCAL = /usr/bin/aclocal
-AUTOCONF = /usr/local/autoconf-2.59/bin/autoconf
-AUTOMAKE = /usr/bin/automake
-AUTOHEADER = /usr/local/autoconf-2.59/bin/autoheader
 ADD_PARALLEL_FILES = @ADD_PARALLEL_FILES@
+AMDEP_FALSE = @AMDEP_FALSE@
+AMDEP_TRUE = @AMDEP_TRUE@
 AMTAR = @AMTAR@
 AM_MAKEFLAGS = @AM_MAKEFLAGS@
 AR = @AR@
-AS = @AS@
+AUTOCONF = /usr/local/autoconf-2.59/bin/autoconf
+AUTOHEADER = /usr/local/autoconf-2.59/bin/autoheader
+AUTOMAKE = /usr/bin/automake
 AWK = @AWK@
+BUILD_CXX_CONDITIONAL_FALSE = @BUILD_CXX_CONDITIONAL_FALSE@
+BUILD_CXX_CONDITIONAL_TRUE = @BUILD_CXX_CONDITIONAL_TRUE@
+BUILD_FORTRAN_CONDITIONAL_FALSE = @BUILD_FORTRAN_CONDITIONAL_FALSE@
+BUILD_FORTRAN_CONDITIONAL_TRUE = @BUILD_FORTRAN_CONDITIONAL_TRUE@
+BUILD_HDF5_HL_CONDITIONAL_FALSE = @BUILD_HDF5_HL_CONDITIONAL_FALSE@
+BUILD_HDF5_HL_CONDITIONAL_TRUE = @BUILD_HDF5_HL_CONDITIONAL_TRUE@
+BUILD_PABLO_CONDITIONAL_FALSE = @BUILD_PABLO_CONDITIONAL_FALSE@
+BUILD_PABLO_CONDITIONAL_TRUE = @BUILD_PABLO_CONDITIONAL_TRUE@
+BUILD_PARALLEL_CONDITIONAL_FALSE = @BUILD_PARALLEL_CONDITIONAL_FALSE@
+BUILD_PARALLEL_CONDITIONAL_TRUE = @BUILD_PARALLEL_CONDITIONAL_TRUE@
 BUILD_PDB2HDF = @BUILD_PDB2HDF@
+BUILD_PDB2HDF_CONDITIONAL_FALSE = @BUILD_PDB2HDF_CONDITIONAL_FALSE@
+BUILD_PDB2HDF_CONDITIONAL_TRUE = @BUILD_PDB2HDF_CONDITIONAL_TRUE@
 BYTESEX = @BYTESEX@
 CC = @CC@
+CCDEPMODE = @CCDEPMODE@
 CC_VERSION = @CC_VERSION@
+CFLAGS = @CFLAGS@
 CONFIG_DATE = @CONFIG_DATE@
 CONFIG_MODE = @CONFIG_MODE@
 CONFIG_USER = @CONFIG_USER@
+CPP = @CPP@
 CPPFLAGS = @CPPFLAGS@
 CXX = @CXX@
 CXXCPP = @CXXCPP@
+CXXDEPMODE = @CXXDEPMODE@
+CXXFLAGS = @CXXFLAGS@
+CYGPATH_W = @CYGPATH_W@
 DEBUG_PKG = @DEBUG_PKG@
+DEFS = @DEFS@
 DEPDIR = @DEPDIR@
-DLLTOOL = @DLLTOOL@
 DYNAMIC_DIRS = @DYNAMIC_DIRS@
 ECHO = @ECHO@
+ECHO_C = @ECHO_C@
+ECHO_N = @ECHO_N@
+ECHO_T = @ECHO_T@
 EGREP = @EGREP@
+EXEEXT = @EXEEXT@
 F77 = @F77@
+
+# Make sure that these variables are exported to the Makefiles
+F9XMODEXT = @F9XMODEXT@
+F9XMODFLAG = @F9XMODFLAG@
 F9XSUFFIXFLAG = @F9XSUFFIXFLAG@
 FC = @FC@
+FCFLAGS = @FCFLAGS@
 FFLAGS = @FFLAGS@
 FILTERS = @FILTERS@
 FSEARCH_DIRS = @FSEARCH_DIRS@
-GCJ = @GCJ@
-GCJFLAGS = @GCJFLAGS@
 H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
 HDF5_INTERFACES = @HDF5_INTERFACES@
@@ -125,21 +169,36 @@ HL_FOR = @HL_FOR@
 HSIZET = @HSIZET@
 HSIZE_T = @HSIZE_T@
 HSSIZE_T = @HSSIZE_T@
+INSTALL_DATA = @INSTALL_DATA@
+INSTALL_PROGRAM = @INSTALL_PROGRAM@
+INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
 INSTRUMENT_LIBRARY = @INSTRUMENT_LIBRARY@
+LDFLAGS = @LDFLAGS@
+LIBOBJS = @LIBOBJS@
+LIBS = @LIBS@
 LIBTOOL = @LIBTOOL@
 LN_S = @LN_S@
+LTLIBOBJS = @LTLIBOBJS@
 LT_STATIC_EXEC = @LT_STATIC_EXEC@
 MAINT = @MAINT@
+MAINTAINER_MODE_FALSE = @MAINTAINER_MODE_FALSE@
+MAINTAINER_MODE_TRUE = @MAINTAINER_MODE_TRUE@
+MAKEINFO = @MAKEINFO@
 MPE = @MPE@
-OBJDUMP = @OBJDUMP@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
+OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
+PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@
+PACKAGE_NAME = @PACKAGE_NAME@
+PACKAGE_STRING = @PACKAGE_STRING@
+PACKAGE_TARNAME = @PACKAGE_TARNAME@
+PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
+PATH_SEPARATOR = @PATH_SEPARATOR@
 PERL = @PERL@
 PTHREAD = @PTHREAD@
 RANLIB = @RANLIB@
-RC = @RC@
 ROOT = @ROOT@
 RUNPARALLEL = @RUNPARALLEL@
 RUNSERIAL = @RUNSERIAL@
@@ -147,6 +206,8 @@ R_INTEGER = @R_INTEGER@
 R_LARGE = @R_LARGE@
 SEARCH = @SEARCH@
 SETX = @SETX@
+SET_MAKE = @SET_MAKE@
+SHELL = @SHELL@
 SIZE_T = @SIZE_T@
 SRB = @SRB@
 STATIC_SHARED = @STATIC_SHARED@
@@ -161,9 +222,52 @@ USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@
 USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@
 USE_FILTER_SZIP = @USE_FILTER_SZIP@
 VERSION = @VERSION@
+ac_ct_AR = @ac_ct_AR@
+ac_ct_CC = @ac_ct_CC@
+ac_ct_CXX = @ac_ct_CXX@
+ac_ct_F77 = @ac_ct_F77@
+ac_ct_FC = @ac_ct_FC@
+ac_ct_RANLIB = @ac_ct_RANLIB@
+ac_ct_STRIP = @ac_ct_STRIP@
+am__fastdepCC_FALSE = @am__fastdepCC_FALSE@
+am__fastdepCC_TRUE = @am__fastdepCC_TRUE@
+am__fastdepCXX_FALSE = @am__fastdepCXX_FALSE@
+am__fastdepCXX_TRUE = @am__fastdepCXX_TRUE@
 am__include = @am__include@
+am__leading_dot = @am__leading_dot@
 am__quote = @am__quote@
+am__tar = @am__tar@
+am__untar = @am__untar@
+bindir = @bindir@
+build = @build@
+build_alias = @build_alias@
+build_cpu = @build_cpu@
+build_os = @build_os@
+build_vendor = @build_vendor@
+datadir = @datadir@
+exec_prefix = @exec_prefix@
+host = @host@
+host_alias = @host_alias@
+host_cpu = @host_cpu@
+host_os = @host_os@
+host_vendor = @host_vendor@
+
+# Install directories that automake doesn't know about
+includedir = $(exec_prefix)/include
+infodir = @infodir@
 install_sh = @install_sh@
+libdir = @libdir@
+libexecdir = @libexecdir@
+localstatedir = @localstatedir@
+mandir = @mandir@
+mkdir_p = @mkdir_p@
+oldincludedir = @oldincludedir@
+prefix = @prefix@
+program_transform_name = @program_transform_name@
+sbindir = @sbindir@
+sharedstatedir = @sharedstatedir@
+sysconfdir = @sysconfdir@
+target_alias = @target_alias@
 
 # Shell commands used in Makefiles
 RM = rm -f
@@ -186,16 +290,8 @@ H5CC_PP = $(bindir)/h5pcc
 H5FC = $(bindir)/h5fc
 H5FC_PP = $(bindir)/h5pfc
 
-# Make sure that these variables are exported to the Makefiles
-F9XMODEXT = @F9XMODEXT@
-F9XMODFLAG = @F9XMODFLAG@
-
 # Include src and tools/lib directories
 INCLUDES = -I$(top_srcdir)/src -I$(top_srcdir)/tools/lib
-
-# These are our main targets, the tools
-bin_PROGRAMS = gif2h5 h52gif
-
 gif2h5_SOURCES = gif2hdf.c gif2mem.c decompress.c gifread.c writehdf.c
 h52gif_SOURCES = hdf2gif.c hdfgifwr.c readhdf.c
 
@@ -214,71 +310,50 @@ PROGS = $(bin_PROGRAMS) $(bin_SCRIPTS) $(noinst_PROGRAMS) $(noinst_SCRIPTS)   \
         $(EXTRA_PROG)
 
 TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST) 
-subdir = tools/gifconv
-mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
-CONFIG_HEADER = $(top_builddir)/src/H5config.h
-CONFIG_CLEAN_FILES =
-bin_PROGRAMS = gif2h5$(EXEEXT) h52gif$(EXEEXT)
-PROGRAMS = $(bin_PROGRAMS)
-
-am_gif2h5_OBJECTS = gif2hdf.$(OBJEXT) gif2mem.$(OBJEXT) \
-	decompress.$(OBJEXT) gifread.$(OBJEXT) writehdf.$(OBJEXT)
-gif2h5_OBJECTS = $(am_gif2h5_OBJECTS)
-gif2h5_LDADD = $(LDADD)
-gif2h5_DEPENDENCIES = $(top_builddir)/src/libhdf5.la \
-	$(top_builddir)/tools/lib/libh5tools.la
-gif2h5_LDFLAGS =
-am_h52gif_OBJECTS = hdf2gif.$(OBJEXT) hdfgifwr.$(OBJEXT) \
-	readhdf.$(OBJEXT)
-h52gif_OBJECTS = $(am_h52gif_OBJECTS)
-h52gif_LDADD = $(LDADD)
-h52gif_DEPENDENCIES = $(top_builddir)/src/libhdf5.la \
-	$(top_builddir)/tools/lib/libh5tools.la
-h52gif_LDFLAGS =
-
-DEFS = @DEFS@
-DEFAULT_INCLUDES =  -I. -I$(srcdir) -I$(top_builddir)/src
-LDFLAGS = @LDFLAGS@
-LIBS = @LIBS@
-depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
-am__depfiles_maybe = depfiles
-@AMDEP_TRUE@DEP_FILES = ./$(DEPDIR)/decompress.Po ./$(DEPDIR)/gif2hdf.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/gif2mem.Po ./$(DEPDIR)/gifread.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/hdf2gif.Po ./$(DEPDIR)/hdfgifwr.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/readhdf.Po ./$(DEPDIR)/writehdf.Po
-COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
-	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
-LTCOMPILE = $(LIBTOOL) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) \
-	$(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
-CCLD = $(CC)
-LINK = $(LIBTOOL) --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
-	$(AM_LDFLAGS) $(LDFLAGS) -o $@
-CFLAGS = @CFLAGS@
-DIST_SOURCES = $(gif2h5_SOURCES) $(h52gif_SOURCES)
-DIST_COMMON = Makefile.am Makefile.in
-SOURCES = $(gif2h5_SOURCES) $(h52gif_SOURCES)
-
 all: all-am
 
 .SUFFIXES:
 .SUFFIXES: .c .lo .o .obj
-$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(top_srcdir)/configure.in $(ACLOCAL_M4)
+$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(am__configure_deps)
+	@for dep in $?; do \
+	  case '$(am__configure_deps)' in \
+	    *$$dep*) \
+	      cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh \
+		&& exit 0; \
+	      exit 1;; \
+	  esac; \
+	done; \
+	echo ' cd $(top_srcdir) && $(AUTOMAKE) --foreign  tools/gifconv/Makefile'; \
 	cd $(top_srcdir) && \
 	  $(AUTOMAKE) --foreign  tools/gifconv/Makefile
-Makefile: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.in  $(top_builddir)/config.status
-	cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)
-binPROGRAMS_INSTALL = $(INSTALL_PROGRAM)
+.PRECIOUS: Makefile
+Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+	@case '$?' in \
+	  *config.status*) \
+	    cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh;; \
+	  *) \
+	    echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)'; \
+	    cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe);; \
+	esac;
+
+$(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+
+$(top_srcdir)/configure: @MAINTAINER_MODE_TRUE@ $(am__configure_deps)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+$(ACLOCAL_M4): @MAINTAINER_MODE_TRUE@ $(am__aclocal_m4_deps)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
 install-binPROGRAMS: $(bin_PROGRAMS)
 	@$(NORMAL_INSTALL)
-	$(mkinstalldirs) $(DESTDIR)$(bindir)
+	test -z "$(bindir)" || $(mkdir_p) "$(DESTDIR)$(bindir)"
 	@list='$(bin_PROGRAMS)'; for p in $$list; do \
 	  p1=`echo $$p|sed 's/$(EXEEXT)$$//'`; \
 	  if test -f $$p \
 	     || test -f $$p1 \
 	  ; then \
 	    f=`echo "$$p1" | sed 's,^.*/,,;$(transform);s/$$/$(EXEEXT)/'`; \
-	   echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) $$p $(DESTDIR)$(bindir)/$$f"; \
-	   $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) $$p $(DESTDIR)$(bindir)/$$f; \
+	   echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) '$$p' '$(DESTDIR)$(bindir)/$$f'"; \
+	   $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) "$$p" "$(DESTDIR)$(bindir)/$$f" || exit 1; \
 	  else :; fi; \
 	done
 
@@ -286,8 +361,8 @@ uninstall-binPROGRAMS:
 	@$(NORMAL_UNINSTALL)
 	@list='$(bin_PROGRAMS)'; for p in $$list; do \
 	  f=`echo "$$p" | sed 's,^.*/,,;s/$(EXEEXT)$$//;$(transform);s/$$/$(EXEEXT)/'`; \
-	  echo " rm -f $(DESTDIR)$(bindir)/$$f"; \
-	  rm -f $(DESTDIR)$(bindir)/$$f; \
+	  echo " rm -f '$(DESTDIR)$(bindir)/$$f'"; \
+	  rm -f "$(DESTDIR)$(bindir)/$$f"; \
 	done
 
 clean-binPROGRAMS:
@@ -304,7 +379,7 @@ h52gif$(EXEEXT): $(h52gif_OBJECTS) $(h52gif_DEPENDENCIES)
 	$(LINK) $(h52gif_LDFLAGS) $(h52gif_OBJECTS) $(h52gif_LDADD) $(LIBS)
 
 mostlyclean-compile:
-	-rm -f *.$(OBJEXT) core *.core
+	-rm -f *.$(OBJEXT)
 
 distclean-compile:
 	-rm -f *.tab.c
@@ -318,27 +393,26 @@ distclean-compile:
 @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/readhdf.Po@am__quote@
 @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/writehdf.Po@am__quote@
 
-distclean-depend:
-	-rm -rf ./$(DEPDIR)
-
 .c.o:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Po' tmpdepfile='$(DEPDIR)/$*.TPo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(COMPILE) -c `test -f '$<' || echo '$(srcdir)/'`$<
+@am__fastdepCC_TRUE@	if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ $<; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(COMPILE) -c $<
 
 .c.obj:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Po' tmpdepfile='$(DEPDIR)/$*.TPo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(COMPILE) -c `cygpath -w $<`
+@am__fastdepCC_TRUE@	if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ `$(CYGPATH_W) '$<'`; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(COMPILE) -c `$(CYGPATH_W) '$<'`
 
 .c.lo:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Plo' tmpdepfile='$(DEPDIR)/$*.TPlo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(LTCOMPILE) -c -o $@ `test -f '$<' || echo '$(srcdir)/'`$<
-CCDEPMODE = @CCDEPMODE@
+@am__fastdepCC_TRUE@	if $(LTCOMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ $<; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Plo"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(LTCOMPILE) -c -o $@ $<
 
 mostlyclean-libtool:
 	-rm -f *.lo
@@ -350,11 +424,6 @@ distclean-libtool:
 	-rm -f libtool
 uninstall-info-am:
 
-ETAGS = etags
-ETAGSFLAGS =
-
-tags: TAGS
-
 ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
@@ -363,6 +432,7 @@ ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	  $(AWK) '    { files[$$0] = 1; } \
 	       END { for (i in files) print i; }'`; \
 	mkid -fID $$unique
+tags: TAGS
 
 TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
@@ -374,8 +444,24 @@ TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 	  done | \
 	  $(AWK) '    { files[$$0] = 1; } \
 	       END { for (i in files) print i; }'`; \
-	test -z "$(ETAGS_ARGS)$$tags$$unique" \
-	  || $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
+	  test -n "$$unique" || unique=$$empty_fix; \
+	  $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	    $$tags $$unique; \
+	fi
+ctags: CTAGS
+CTAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
+		$(TAGS_FILES) $(LISP)
+	tags=; \
+	here=`pwd`; \
+	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
+	unique=`for i in $$list; do \
+	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
+	  done | \
+	  $(AWK) '    { files[$$0] = 1; } \
+	       END { for (i in files) print i; }'`; \
+	test -z "$(CTAGS_ARGS)$$tags$$unique" \
+	  || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
 	     $$tags $$unique
 
 GTAGS:
@@ -384,19 +470,22 @@ GTAGS:
 	  && gtags -i $(GTAGS_ARGS) $$here
 
 distclean-tags:
-	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH
-DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
-
-top_distdir = ../..
-distdir = $(top_distdir)/$(PACKAGE)-$(VERSION)
+	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
 
 distdir: $(DISTFILES)
-	@list='$(DISTFILES)'; for file in $$list; do \
+	$(mkdir_p) $(distdir)/../../config
+	@srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`; \
+	topsrcdirstrip=`echo "$(top_srcdir)" | sed 's|.|.|g'`; \
+	list='$(DISTFILES)'; for file in $$list; do \
+	  case $$file in \
+	    $(srcdir)/*) file=`echo "$$file" | sed "s|^$$srcdirstrip/||"`;; \
+	    $(top_srcdir)/*) file=`echo "$$file" | sed "s|^$$topsrcdirstrip/|$(top_builddir)/|"`;; \
+	  esac; \
 	  if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
 	  dir=`echo "$$file" | sed -e 's,/[^/]*$$,,'`; \
 	  if test "$$dir" != "$$file" && test "$$dir" != "."; then \
 	    dir="/$$dir"; \
-	    $(mkinstalldirs) "$(distdir)$$dir"; \
+	    $(mkdir_p) "$(distdir)$$dir"; \
 	  else \
 	    dir=''; \
 	  fi; \
@@ -415,10 +504,10 @@ check-am: all-am
 	$(MAKE) $(AM_MAKEFLAGS) check-TESTS
 check: check-am
 all-am: Makefile $(PROGRAMS) all-local
-
 installdirs:
-	$(mkinstalldirs) $(DESTDIR)$(bindir)
-
+	for dir in "$(DESTDIR)$(bindir)"; do \
+	  test -z "$$dir" || $(mkdir_p) "$$dir"; \
+	done
 install: install-am
 install-exec: install-exec-am
 install-data: install-data-am
@@ -430,7 +519,7 @@ install-am: all-am
 installcheck: installcheck-am
 install-strip:
 	$(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
-	  INSTALL_STRIP_FLAG=-s \
+	  install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
 	  `test -z '$(STRIP)' || \
 	    echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install
 mostlyclean-generic:
@@ -438,7 +527,7 @@ mostlyclean-generic:
 clean-generic:
 
 distclean-generic:
-	-rm -f Makefile $(CONFIG_CLEAN_FILES)
+	-test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
 
 maintainer-clean-generic:
 	@echo "This command is intended for maintainers to use"
@@ -448,14 +537,17 @@ clean: clean-am
 clean-am: clean-binPROGRAMS clean-generic clean-libtool mostlyclean-am
 
 distclean: distclean-am
-
-distclean-am: clean-am distclean-compile distclean-depend \
-	distclean-generic distclean-libtool distclean-tags
+	-rm -rf ./$(DEPDIR)
+	-rm -f Makefile
+distclean-am: clean-am distclean-compile distclean-generic \
+	distclean-libtool distclean-tags
 
 dvi: dvi-am
 
 dvi-am:
 
+html: html-am
+
 info: info-am
 
 info-am:
@@ -471,7 +563,8 @@ install-man:
 installcheck-am:
 
 maintainer-clean: maintainer-clean-am
-
+	-rm -rf ./$(DEPDIR)
+	-rm -f Makefile
 maintainer-clean-am: distclean-am maintainer-clean-generic
 
 mostlyclean: mostlyclean-am
@@ -479,19 +572,28 @@ mostlyclean: mostlyclean-am
 mostlyclean-am: mostlyclean-compile mostlyclean-generic \
 	mostlyclean-libtool
 
+pdf: pdf-am
+
+pdf-am:
+
+ps: ps-am
+
+ps-am:
+
 uninstall-am: uninstall-binPROGRAMS uninstall-info-am
 
-.PHONY: GTAGS all all-am all-local check check-TESTS check-am clean \
-	clean-binPROGRAMS clean-generic clean-libtool distclean \
-	distclean-compile distclean-depend distclean-generic \
-	distclean-libtool distclean-tags distdir dvi dvi-am info \
-	info-am install install-am install-binPROGRAMS install-data \
-	install-data-am install-exec install-exec-am install-info \
-	install-info-am install-man install-strip installcheck \
-	installcheck-am installdirs maintainer-clean \
+.PHONY: CTAGS GTAGS all all-am all-local check check-TESTS check-am \
+	clean clean-binPROGRAMS clean-generic clean-libtool ctags \
+	distclean distclean-compile distclean-generic \
+	distclean-libtool distclean-tags distdir dvi dvi-am html \
+	html-am info info-am install install-am install-binPROGRAMS \
+	install-data install-data-am install-exec install-exec-am \
+	install-info install-info-am install-man install-strip \
+	installcheck installcheck-am installdirs maintainer-clean \
 	maintainer-clean-generic mostlyclean mostlyclean-compile \
-	mostlyclean-generic mostlyclean-libtool tags uninstall \
-	uninstall-am uninstall-binPROGRAMS uninstall-info-am
+	mostlyclean-generic mostlyclean-libtool pdf pdf-am ps ps-am \
+	tags uninstall uninstall-am uninstall-binPROGRAMS \
+	uninstall-info-am
 
 
 # lib/progs/tests targets recurse into subdirectories. build-* targets
diff --git a/tools/h5diff/Makefile.in b/tools/h5diff/Makefile.in
index 3f26cf7..4d8330b 100644
--- a/tools/h5diff/Makefile.in
+++ b/tools/h5diff/Makefile.in
@@ -1,8 +1,8 @@
-# Makefile.in generated by automake 1.6.3 from Makefile.am.
+# Makefile.in generated by automake 1.9.5 from Makefile.am.
 # @configure_input@
 
-# Copyright 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002
-# Free Software Foundation, Inc.
+# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
+# 2003, 2004, 2005  Free Software Foundation, Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -29,93 +29,145 @@
 #
 # HDF5 Library Makefile(.in)
 #
-SHELL = @SHELL@
+
+SOURCES = $(h5diff_SOURCES) $(h5difftst_SOURCES) $(ph5diff_SOURCES)
 
 srcdir = @srcdir@
 top_srcdir = @top_srcdir@
 VPATH = @srcdir@
-prefix = @prefix@
-exec_prefix = @exec_prefix@
-
-bindir = @bindir@
-sbindir = @sbindir@
-libexecdir = @libexecdir@
-datadir = @datadir@
-sysconfdir = @sysconfdir@
-sharedstatedir = @sharedstatedir@
-localstatedir = @localstatedir@
-libdir = @libdir@
-infodir = @infodir@
-mandir = @mandir@
-oldincludedir = /usr/include
 pkgdatadir = $(datadir)/@PACKAGE@
 pkglibdir = $(libdir)/@PACKAGE@
 pkgincludedir = $(includedir)/@PACKAGE@
 top_builddir = ../..
-
 am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
 INSTALL = @INSTALL@
-INSTALL_PROGRAM = @INSTALL_PROGRAM@
-INSTALL_DATA = @INSTALL_DATA@
 install_sh_DATA = $(install_sh) -c -m 644
 install_sh_PROGRAM = $(install_sh) -c
 install_sh_SCRIPT = $(install_sh) -c
-INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_HEADER = $(INSTALL_DATA)
-transform = @program_transform_name@
+transform = $(program_transform_name)
 NORMAL_INSTALL = :
 PRE_INSTALL = :
 POST_INSTALL = :
 NORMAL_UNINSTALL = :
 PRE_UNINSTALL = :
 POST_UNINSTALL = :
-host_alias = @host_alias@
+build_triplet = @build@
 host_triplet = @host@
-
-EXEEXT = @EXEEXT@
-OBJEXT = @OBJEXT@
-PATH_SEPARATOR = @PATH_SEPARATOR@
-
-# Install directories that automake doesn't know about
-includedir = $(exec_prefix)/include
-
+DIST_COMMON = $(srcdir)/Makefile.am $(srcdir)/Makefile.in \
+	$(top_srcdir)/config/commence.am \
+	$(top_srcdir)/config/conclude.am
+bin_PROGRAMS = h5diff$(EXEEXT) $(am__EXEEXT_1)
+check_PROGRAMS = $(am__EXEEXT_2)
+subdir = tools/h5diff
+ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
+am__aclocal_m4_deps = $(top_srcdir)/configure.in
+am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+	$(ACLOCAL_M4)
+mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
+CONFIG_HEADER = $(top_builddir)/src/H5config.h
+CONFIG_CLEAN_FILES =
+@BUILD_PARALLEL_CONDITIONAL_TRUE@am__EXEEXT_1 = ph5diff$(EXEEXT)
+am__installdirs = "$(DESTDIR)$(bindir)"
+binPROGRAMS_INSTALL = $(INSTALL_PROGRAM)
+am__EXEEXT_2 = h5difftst$(EXEEXT)
+PROGRAMS = $(bin_PROGRAMS)
+am_h5diff_OBJECTS = h5diff_main.$(OBJEXT) h5diff_common.$(OBJEXT)
+h5diff_OBJECTS = $(am_h5diff_OBJECTS)
+h5diff_LDADD = $(LDADD)
+am__DEPENDENCIES_1 = $(top_builddir)/tools/lib/libh5tools.la
+am__DEPENDENCIES_2 = $(top_builddir)/src/libhdf5.la
+h5diff_DEPENDENCIES = $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_2)
+am_h5difftst_OBJECTS = testh5diff_main.$(OBJEXT) \
+	testh5diff_attr.$(OBJEXT) testh5diff_basic.$(OBJEXT) \
+	testh5diff_dset.$(OBJEXT) testh5diff_util.$(OBJEXT)
+h5difftst_OBJECTS = $(am_h5difftst_OBJECTS)
+h5difftst_LDADD = $(LDADD)
+h5difftst_DEPENDENCIES = $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_2)
+am_ph5diff_OBJECTS = ph5diff_main.$(OBJEXT) h5diff_common.$(OBJEXT)
+ph5diff_OBJECTS = $(am_ph5diff_OBJECTS)
+ph5diff_LDADD = $(LDADD)
+ph5diff_DEPENDENCIES = $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_2)
+DEFAULT_INCLUDES = -I. -I$(srcdir) -I$(top_builddir)/src
+depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
+am__depfiles_maybe = depfiles
+COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
+	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
+LTCOMPILE = $(LIBTOOL) --tag=CC --mode=compile $(CC) $(DEFS) \
+	$(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
+	$(AM_CFLAGS) $(CFLAGS)
+CCLD = $(CC)
+LINK = $(LIBTOOL) --tag=CC --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
+	$(AM_LDFLAGS) $(LDFLAGS) -o $@
+SOURCES = $(h5diff_SOURCES) $(h5difftst_SOURCES) $(ph5diff_SOURCES)
+DIST_SOURCES = $(h5diff_SOURCES) $(h5difftst_SOURCES) \
+	$(ph5diff_SOURCES)
+ETAGS = etags
+CTAGS = ctags
+DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
 
 # Set the paths for autotools to be correct on heping.
 # Ideally, these tools should never be needed during the build.
 ACLOCAL = /usr/bin/aclocal
-AUTOCONF = /usr/local/autoconf-2.59/bin/autoconf
-AUTOMAKE = /usr/bin/automake
-AUTOHEADER = /usr/local/autoconf-2.59/bin/autoheader
 ADD_PARALLEL_FILES = @ADD_PARALLEL_FILES@
+AMDEP_FALSE = @AMDEP_FALSE@
+AMDEP_TRUE = @AMDEP_TRUE@
 AMTAR = @AMTAR@
 AM_MAKEFLAGS = @AM_MAKEFLAGS@
 AR = @AR@
-AS = @AS@
+AUTOCONF = /usr/local/autoconf-2.59/bin/autoconf
+AUTOHEADER = /usr/local/autoconf-2.59/bin/autoheader
+AUTOMAKE = /usr/bin/automake
 AWK = @AWK@
+BUILD_CXX_CONDITIONAL_FALSE = @BUILD_CXX_CONDITIONAL_FALSE@
+BUILD_CXX_CONDITIONAL_TRUE = @BUILD_CXX_CONDITIONAL_TRUE@
+BUILD_FORTRAN_CONDITIONAL_FALSE = @BUILD_FORTRAN_CONDITIONAL_FALSE@
+BUILD_FORTRAN_CONDITIONAL_TRUE = @BUILD_FORTRAN_CONDITIONAL_TRUE@
+BUILD_HDF5_HL_CONDITIONAL_FALSE = @BUILD_HDF5_HL_CONDITIONAL_FALSE@
+BUILD_HDF5_HL_CONDITIONAL_TRUE = @BUILD_HDF5_HL_CONDITIONAL_TRUE@
+BUILD_PABLO_CONDITIONAL_FALSE = @BUILD_PABLO_CONDITIONAL_FALSE@
+BUILD_PABLO_CONDITIONAL_TRUE = @BUILD_PABLO_CONDITIONAL_TRUE@
+BUILD_PARALLEL_CONDITIONAL_FALSE = @BUILD_PARALLEL_CONDITIONAL_FALSE@
+BUILD_PARALLEL_CONDITIONAL_TRUE = @BUILD_PARALLEL_CONDITIONAL_TRUE@
 BUILD_PDB2HDF = @BUILD_PDB2HDF@
+BUILD_PDB2HDF_CONDITIONAL_FALSE = @BUILD_PDB2HDF_CONDITIONAL_FALSE@
+BUILD_PDB2HDF_CONDITIONAL_TRUE = @BUILD_PDB2HDF_CONDITIONAL_TRUE@
 BYTESEX = @BYTESEX@
 CC = @CC@
+CCDEPMODE = @CCDEPMODE@
 CC_VERSION = @CC_VERSION@
+CFLAGS = @CFLAGS@
 CONFIG_DATE = @CONFIG_DATE@
 CONFIG_MODE = @CONFIG_MODE@
 CONFIG_USER = @CONFIG_USER@
+CPP = @CPP@
 CPPFLAGS = @CPPFLAGS@
 CXX = @CXX@
 CXXCPP = @CXXCPP@
+CXXDEPMODE = @CXXDEPMODE@
+CXXFLAGS = @CXXFLAGS@
+CYGPATH_W = @CYGPATH_W@
 DEBUG_PKG = @DEBUG_PKG@
+DEFS = @DEFS@
 DEPDIR = @DEPDIR@
-DLLTOOL = @DLLTOOL@
 DYNAMIC_DIRS = @DYNAMIC_DIRS@
 ECHO = @ECHO@
+ECHO_C = @ECHO_C@
+ECHO_N = @ECHO_N@
+ECHO_T = @ECHO_T@
 EGREP = @EGREP@
+EXEEXT = @EXEEXT@
 F77 = @F77@
+
+# Make sure that these variables are exported to the Makefiles
+F9XMODEXT = @F9XMODEXT@
+F9XMODFLAG = @F9XMODFLAG@
 F9XSUFFIXFLAG = @F9XSUFFIXFLAG@
 FC = @FC@
+FCFLAGS = @FCFLAGS@
 FFLAGS = @FFLAGS@
 FILTERS = @FILTERS@
 FSEARCH_DIRS = @FSEARCH_DIRS@
-GCJ = @GCJ@
-GCJFLAGS = @GCJFLAGS@
 H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
 HDF5_INTERFACES = @HDF5_INTERFACES@
@@ -125,21 +177,36 @@ HL_FOR = @HL_FOR@
 HSIZET = @HSIZET@
 HSIZE_T = @HSIZE_T@
 HSSIZE_T = @HSSIZE_T@
+INSTALL_DATA = @INSTALL_DATA@
+INSTALL_PROGRAM = @INSTALL_PROGRAM@
+INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
 INSTRUMENT_LIBRARY = @INSTRUMENT_LIBRARY@
+LDFLAGS = @LDFLAGS@
+LIBOBJS = @LIBOBJS@
+LIBS = @LIBS@
 LIBTOOL = @LIBTOOL@
 LN_S = @LN_S@
+LTLIBOBJS = @LTLIBOBJS@
 LT_STATIC_EXEC = @LT_STATIC_EXEC@
 MAINT = @MAINT@
+MAINTAINER_MODE_FALSE = @MAINTAINER_MODE_FALSE@
+MAINTAINER_MODE_TRUE = @MAINTAINER_MODE_TRUE@
+MAKEINFO = @MAKEINFO@
 MPE = @MPE@
-OBJDUMP = @OBJDUMP@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
+OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
+PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@
+PACKAGE_NAME = @PACKAGE_NAME@
+PACKAGE_STRING = @PACKAGE_STRING@
+PACKAGE_TARNAME = @PACKAGE_TARNAME@
+PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
+PATH_SEPARATOR = @PATH_SEPARATOR@
 PERL = @PERL@
 PTHREAD = @PTHREAD@
 RANLIB = @RANLIB@
-RC = @RC@
 ROOT = @ROOT@
 RUNPARALLEL = @RUNPARALLEL@
 RUNSERIAL = @RUNSERIAL@
@@ -147,6 +214,8 @@ R_INTEGER = @R_INTEGER@
 R_LARGE = @R_LARGE@
 SEARCH = @SEARCH@
 SETX = @SETX@
+SET_MAKE = @SET_MAKE@
+SHELL = @SHELL@
 SIZE_T = @SIZE_T@
 SRB = @SRB@
 STATIC_SHARED = @STATIC_SHARED@
@@ -161,9 +230,52 @@ USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@
 USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@
 USE_FILTER_SZIP = @USE_FILTER_SZIP@
 VERSION = @VERSION@
+ac_ct_AR = @ac_ct_AR@
+ac_ct_CC = @ac_ct_CC@
+ac_ct_CXX = @ac_ct_CXX@
+ac_ct_F77 = @ac_ct_F77@
+ac_ct_FC = @ac_ct_FC@
+ac_ct_RANLIB = @ac_ct_RANLIB@
+ac_ct_STRIP = @ac_ct_STRIP@
+am__fastdepCC_FALSE = @am__fastdepCC_FALSE@
+am__fastdepCC_TRUE = @am__fastdepCC_TRUE@
+am__fastdepCXX_FALSE = @am__fastdepCXX_FALSE@
+am__fastdepCXX_TRUE = @am__fastdepCXX_TRUE@
 am__include = @am__include@
+am__leading_dot = @am__leading_dot@
 am__quote = @am__quote@
+am__tar = @am__tar@
+am__untar = @am__untar@
+bindir = @bindir@
+build = @build@
+build_alias = @build_alias@
+build_cpu = @build_cpu@
+build_os = @build_os@
+build_vendor = @build_vendor@
+datadir = @datadir@
+exec_prefix = @exec_prefix@
+host = @host@
+host_alias = @host_alias@
+host_cpu = @host_cpu@
+host_os = @host_os@
+host_vendor = @host_vendor@
+
+# Install directories that automake doesn't know about
+includedir = $(exec_prefix)/include
+infodir = @infodir@
 install_sh = @install_sh@
+libdir = @libdir@
+libexecdir = @libexecdir@
+localstatedir = @localstatedir@
+mandir = @mandir@
+mkdir_p = @mkdir_p@
+oldincludedir = @oldincludedir@
+prefix = @prefix@
+program_transform_name = @program_transform_name@
+sbindir = @sbindir@
+sharedstatedir = @sharedstatedir@
+sysconfdir = @sysconfdir@
+target_alias = @target_alias@
 
 # Shell commands used in Makefiles
 RM = rm -f
@@ -186,28 +298,19 @@ H5CC_PP = $(bindir)/h5pcc
 H5FC = $(bindir)/h5fc
 H5FC_PP = $(bindir)/h5pfc
 
-# Make sure that these variables are exported to the Makefiles
-F9XMODEXT = @F9XMODEXT@
-F9XMODFLAG = @F9XMODFLAG@
-
 # Include src and tools/lib directories
 INCLUDES = -I$(top_srcdir)/src -I$(top_srcdir)/tools/lib
+@BUILD_PARALLEL_CONDITIONAL_FALSE@H5PDIFF = 
 
 # Always build and test h5diff but build and test ph5diff only if parallel
 # is enabled.
 @BUILD_PARALLEL_CONDITIONAL_TRUE@H5PDIFF = ph5diff
-@BUILD_PARALLEL_CONDITIONAL_FALSE@H5PDIFF = 
-@BUILD_PARALLEL_CONDITIONAL_TRUE@H5DIFF_SCRIPT = $(srcdir)/testh5diff.sh $(srcdir)/testph5diff.sh
 @BUILD_PARALLEL_CONDITIONAL_FALSE@H5DIFF_SCRIPT = $(srcdir)/testh5diff.sh
-
-# Our main target, h5diff
-bin_PROGRAMS = h5diff $(H5PDIFF)
+@BUILD_PARALLEL_CONDITIONAL_TRUE@H5DIFF_SCRIPT = $(srcdir)/testh5diff.sh $(srcdir)/testph5diff.sh
 
 # Test programs and scripts
 TEST_PROG = h5difftst
 TEST_SCRIPT = $(H5DIFF_SCRIPT)
-
-check_PROGRAMS = $(TEST_PROG)
 check_SCRIPTS = $(TEST_SCRIPT)
 
 # Source files for the program
@@ -236,84 +339,50 @@ PROGS = $(bin_PROGRAMS) $(bin_SCRIPTS) $(noinst_PROGRAMS) $(noinst_SCRIPTS)   \
         $(EXTRA_PROG)
 
 TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST) 
-subdir = tools/h5diff
-mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
-CONFIG_HEADER = $(top_builddir)/src/H5config.h
-CONFIG_CLEAN_FILES =
-@BUILD_PARALLEL_CONDITIONAL_TRUE@bin_PROGRAMS = h5diff$(EXEEXT) \
-@BUILD_PARALLEL_CONDITIONAL_TRUE@	ph5diff$(EXEEXT)
-@BUILD_PARALLEL_CONDITIONAL_FALSE@bin_PROGRAMS = h5diff$(EXEEXT)
-check_PROGRAMS = h5difftst$(EXEEXT)
-PROGRAMS = $(bin_PROGRAMS)
-
-am_h5diff_OBJECTS = h5diff_main.$(OBJEXT) h5diff_common.$(OBJEXT)
-h5diff_OBJECTS = $(am_h5diff_OBJECTS)
-h5diff_LDADD = $(LDADD)
-h5diff_DEPENDENCIES = $(top_builddir)/tools/lib/libh5tools.la \
-	$(top_builddir)/src/libhdf5.la
-h5diff_LDFLAGS =
-am_h5difftst_OBJECTS = testh5diff_main.$(OBJEXT) \
-	testh5diff_attr.$(OBJEXT) testh5diff_basic.$(OBJEXT) \
-	testh5diff_dset.$(OBJEXT) testh5diff_util.$(OBJEXT)
-h5difftst_OBJECTS = $(am_h5difftst_OBJECTS)
-h5difftst_LDADD = $(LDADD)
-h5difftst_DEPENDENCIES = $(top_builddir)/tools/lib/libh5tools.la \
-	$(top_builddir)/src/libhdf5.la
-h5difftst_LDFLAGS =
-am_ph5diff_OBJECTS = ph5diff_main.$(OBJEXT) h5diff_common.$(OBJEXT)
-ph5diff_OBJECTS = $(am_ph5diff_OBJECTS)
-ph5diff_LDADD = $(LDADD)
-ph5diff_DEPENDENCIES = $(top_builddir)/tools/lib/libh5tools.la \
-	$(top_builddir)/src/libhdf5.la
-ph5diff_LDFLAGS =
-
-DEFS = @DEFS@
-DEFAULT_INCLUDES =  -I. -I$(srcdir) -I$(top_builddir)/src
-LDFLAGS = @LDFLAGS@
-LIBS = @LIBS@
-depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
-am__depfiles_maybe = depfiles
-@AMDEP_TRUE@DEP_FILES = ./$(DEPDIR)/h5diff_common.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/h5diff_main.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/ph5diff_main.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/testh5diff_attr.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/testh5diff_basic.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/testh5diff_dset.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/testh5diff_main.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/testh5diff_util.Po
-COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
-	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
-LTCOMPILE = $(LIBTOOL) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) \
-	$(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
-CCLD = $(CC)
-LINK = $(LIBTOOL) --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
-	$(AM_LDFLAGS) $(LDFLAGS) -o $@
-CFLAGS = @CFLAGS@
-DIST_SOURCES = $(h5diff_SOURCES) $(h5difftst_SOURCES) $(ph5diff_SOURCES)
-DIST_COMMON = Makefile.am Makefile.in
-SOURCES = $(h5diff_SOURCES) $(h5difftst_SOURCES) $(ph5diff_SOURCES)
-
 all: all-am
 
 .SUFFIXES:
 .SUFFIXES: .c .lo .o .obj
-$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(top_srcdir)/configure.in $(ACLOCAL_M4)
+$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(am__configure_deps)
+	@for dep in $?; do \
+	  case '$(am__configure_deps)' in \
+	    *$$dep*) \
+	      cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh \
+		&& exit 0; \
+	      exit 1;; \
+	  esac; \
+	done; \
+	echo ' cd $(top_srcdir) && $(AUTOMAKE) --foreign  tools/h5diff/Makefile'; \
 	cd $(top_srcdir) && \
 	  $(AUTOMAKE) --foreign  tools/h5diff/Makefile
-Makefile: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.in  $(top_builddir)/config.status
-	cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)
-binPROGRAMS_INSTALL = $(INSTALL_PROGRAM)
+.PRECIOUS: Makefile
+Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+	@case '$?' in \
+	  *config.status*) \
+	    cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh;; \
+	  *) \
+	    echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)'; \
+	    cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe);; \
+	esac;
+
+$(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+
+$(top_srcdir)/configure: @MAINTAINER_MODE_TRUE@ $(am__configure_deps)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+$(ACLOCAL_M4): @MAINTAINER_MODE_TRUE@ $(am__aclocal_m4_deps)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
 install-binPROGRAMS: $(bin_PROGRAMS)
 	@$(NORMAL_INSTALL)
-	$(mkinstalldirs) $(DESTDIR)$(bindir)
+	test -z "$(bindir)" || $(mkdir_p) "$(DESTDIR)$(bindir)"
 	@list='$(bin_PROGRAMS)'; for p in $$list; do \
 	  p1=`echo $$p|sed 's/$(EXEEXT)$$//'`; \
 	  if test -f $$p \
 	     || test -f $$p1 \
 	  ; then \
 	    f=`echo "$$p1" | sed 's,^.*/,,;$(transform);s/$$/$(EXEEXT)/'`; \
-	   echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) $$p $(DESTDIR)$(bindir)/$$f"; \
-	   $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) $$p $(DESTDIR)$(bindir)/$$f; \
+	   echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) '$$p' '$(DESTDIR)$(bindir)/$$f'"; \
+	   $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) "$$p" "$(DESTDIR)$(bindir)/$$f" || exit 1; \
 	  else :; fi; \
 	done
 
@@ -321,8 +390,8 @@ uninstall-binPROGRAMS:
 	@$(NORMAL_UNINSTALL)
 	@list='$(bin_PROGRAMS)'; for p in $$list; do \
 	  f=`echo "$$p" | sed 's,^.*/,,;s/$(EXEEXT)$$//;$(transform);s/$$/$(EXEEXT)/'`; \
-	  echo " rm -f $(DESTDIR)$(bindir)/$$f"; \
-	  rm -f $(DESTDIR)$(bindir)/$$f; \
+	  echo " rm -f '$(DESTDIR)$(bindir)/$$f'"; \
+	  rm -f "$(DESTDIR)$(bindir)/$$f"; \
 	done
 
 clean-binPROGRAMS:
@@ -349,7 +418,7 @@ ph5diff$(EXEEXT): $(ph5diff_OBJECTS) $(ph5diff_DEPENDENCIES)
 	$(LINK) $(ph5diff_LDFLAGS) $(ph5diff_OBJECTS) $(ph5diff_LDADD) $(LIBS)
 
 mostlyclean-compile:
-	-rm -f *.$(OBJEXT) core *.core
+	-rm -f *.$(OBJEXT)
 
 distclean-compile:
 	-rm -f *.tab.c
@@ -363,27 +432,26 @@ distclean-compile:
 @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/testh5diff_main.Po@am__quote@
 @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/testh5diff_util.Po@am__quote@
 
-distclean-depend:
-	-rm -rf ./$(DEPDIR)
-
 .c.o:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Po' tmpdepfile='$(DEPDIR)/$*.TPo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(COMPILE) -c `test -f '$<' || echo '$(srcdir)/'`$<
+@am__fastdepCC_TRUE@	if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ $<; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(COMPILE) -c $<
 
 .c.obj:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Po' tmpdepfile='$(DEPDIR)/$*.TPo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(COMPILE) -c `cygpath -w $<`
+@am__fastdepCC_TRUE@	if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ `$(CYGPATH_W) '$<'`; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(COMPILE) -c `$(CYGPATH_W) '$<'`
 
 .c.lo:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Plo' tmpdepfile='$(DEPDIR)/$*.TPlo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(LTCOMPILE) -c -o $@ `test -f '$<' || echo '$(srcdir)/'`$<
-CCDEPMODE = @CCDEPMODE@
+@am__fastdepCC_TRUE@	if $(LTCOMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ $<; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Plo"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(LTCOMPILE) -c -o $@ $<
 
 mostlyclean-libtool:
 	-rm -f *.lo
@@ -395,11 +463,6 @@ distclean-libtool:
 	-rm -f libtool
 uninstall-info-am:
 
-ETAGS = etags
-ETAGSFLAGS =
-
-tags: TAGS
-
 ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
@@ -408,6 +471,7 @@ ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	  $(AWK) '    { files[$$0] = 1; } \
 	       END { for (i in files) print i; }'`; \
 	mkid -fID $$unique
+tags: TAGS
 
 TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
@@ -419,8 +483,24 @@ TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 	  done | \
 	  $(AWK) '    { files[$$0] = 1; } \
 	       END { for (i in files) print i; }'`; \
-	test -z "$(ETAGS_ARGS)$$tags$$unique" \
-	  || $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
+	  test -n "$$unique" || unique=$$empty_fix; \
+	  $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	    $$tags $$unique; \
+	fi
+ctags: CTAGS
+CTAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
+		$(TAGS_FILES) $(LISP)
+	tags=; \
+	here=`pwd`; \
+	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
+	unique=`for i in $$list; do \
+	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
+	  done | \
+	  $(AWK) '    { files[$$0] = 1; } \
+	       END { for (i in files) print i; }'`; \
+	test -z "$(CTAGS_ARGS)$$tags$$unique" \
+	  || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
 	     $$tags $$unique
 
 GTAGS:
@@ -429,19 +509,22 @@ GTAGS:
 	  && gtags -i $(GTAGS_ARGS) $$here
 
 distclean-tags:
-	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH
-DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
-
-top_distdir = ../..
-distdir = $(top_distdir)/$(PACKAGE)-$(VERSION)
+	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
 
 distdir: $(DISTFILES)
-	@list='$(DISTFILES)'; for file in $$list; do \
+	$(mkdir_p) $(distdir)/../../config
+	@srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`; \
+	topsrcdirstrip=`echo "$(top_srcdir)" | sed 's|.|.|g'`; \
+	list='$(DISTFILES)'; for file in $$list; do \
+	  case $$file in \
+	    $(srcdir)/*) file=`echo "$$file" | sed "s|^$$srcdirstrip/||"`;; \
+	    $(top_srcdir)/*) file=`echo "$$file" | sed "s|^$$topsrcdirstrip/|$(top_builddir)/|"`;; \
+	  esac; \
 	  if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
 	  dir=`echo "$$file" | sed -e 's,/[^/]*$$,,'`; \
 	  if test "$$dir" != "$$file" && test "$$dir" != "."; then \
 	    dir="/$$dir"; \
-	    $(mkinstalldirs) "$(distdir)$$dir"; \
+	    $(mkdir_p) "$(distdir)$$dir"; \
 	  else \
 	    dir=''; \
 	  fi; \
@@ -461,10 +544,10 @@ check-am: all-am
 	$(MAKE) $(AM_MAKEFLAGS) check-TESTS
 check: check-am
 all-am: Makefile $(PROGRAMS) all-local
-
 installdirs:
-	$(mkinstalldirs) $(DESTDIR)$(bindir)
-
+	for dir in "$(DESTDIR)$(bindir)"; do \
+	  test -z "$$dir" || $(mkdir_p) "$$dir"; \
+	done
 install: install-am
 install-exec: install-exec-am
 install-data: install-data-am
@@ -476,7 +559,7 @@ install-am: all-am
 installcheck: installcheck-am
 install-strip:
 	$(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
-	  INSTALL_STRIP_FLAG=-s \
+	  install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
 	  `test -z '$(STRIP)' || \
 	    echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install
 mostlyclean-generic:
@@ -485,7 +568,7 @@ mostlyclean-generic:
 clean-generic:
 
 distclean-generic:
-	-rm -f Makefile $(CONFIG_CLEAN_FILES)
+	-test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
 
 maintainer-clean-generic:
 	@echo "This command is intended for maintainers to use"
@@ -496,14 +579,17 @@ clean-am: clean-binPROGRAMS clean-checkPROGRAMS clean-generic \
 	clean-libtool mostlyclean-am
 
 distclean: distclean-am
-
-distclean-am: clean-am distclean-compile distclean-depend \
-	distclean-generic distclean-libtool distclean-tags
+	-rm -rf ./$(DEPDIR)
+	-rm -f Makefile
+distclean-am: clean-am distclean-compile distclean-generic \
+	distclean-libtool distclean-tags
 
 dvi: dvi-am
 
 dvi-am:
 
+html: html-am
+
 info: info-am
 
 info-am:
@@ -519,7 +605,8 @@ install-man:
 installcheck-am:
 
 maintainer-clean: maintainer-clean-am
-
+	-rm -rf ./$(DEPDIR)
+	-rm -f Makefile
 maintainer-clean-am: distclean-am maintainer-clean-generic
 
 mostlyclean: mostlyclean-am
@@ -527,19 +614,28 @@ mostlyclean: mostlyclean-am
 mostlyclean-am: mostlyclean-compile mostlyclean-generic \
 	mostlyclean-libtool
 
+pdf: pdf-am
+
+pdf-am:
+
+ps: ps-am
+
+ps-am:
+
 uninstall-am: uninstall-binPROGRAMS uninstall-info-am
 
-.PHONY: GTAGS all all-am all-local check check-TESTS check-am clean \
-	clean-binPROGRAMS clean-checkPROGRAMS clean-generic \
-	clean-libtool distclean distclean-compile distclean-depend \
+.PHONY: CTAGS GTAGS all all-am all-local check check-TESTS check-am \
+	clean clean-binPROGRAMS clean-checkPROGRAMS clean-generic \
+	clean-libtool ctags distclean distclean-compile \
 	distclean-generic distclean-libtool distclean-tags distdir dvi \
-	dvi-am info info-am install install-am install-binPROGRAMS \
-	install-data install-data-am install-exec install-exec-am \
-	install-info install-info-am install-man install-strip \
-	installcheck installcheck-am installdirs maintainer-clean \
-	maintainer-clean-generic mostlyclean mostlyclean-compile \
-	mostlyclean-generic mostlyclean-libtool tags uninstall \
-	uninstall-am uninstall-binPROGRAMS uninstall-info-am
+	dvi-am html html-am info info-am install install-am \
+	install-binPROGRAMS install-data install-data-am install-exec \
+	install-exec-am install-info install-info-am install-man \
+	install-strip installcheck installcheck-am installdirs \
+	maintainer-clean maintainer-clean-generic mostlyclean \
+	mostlyclean-compile mostlyclean-generic mostlyclean-libtool \
+	pdf pdf-am ps ps-am tags uninstall uninstall-am \
+	uninstall-binPROGRAMS uninstall-info-am
 
 
 # lib/progs/tests targets recurse into subdirectories. build-* targets
diff --git a/tools/h5dump/Makefile.in b/tools/h5dump/Makefile.in
index 2cfcb3c..31720fa 100644
--- a/tools/h5dump/Makefile.in
+++ b/tools/h5dump/Makefile.in
@@ -1,8 +1,8 @@
-# Makefile.in generated by automake 1.6.3 from Makefile.am.
+# Makefile.in generated by automake 1.9.5 from Makefile.am.
 # @configure_input@
 
-# Copyright 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002
-# Free Software Foundation, Inc.
+# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
+# 2003, 2004, 2005  Free Software Foundation, Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -29,93 +29,138 @@
 #
 # HDF5 Library Makefile(.in)
 #
-SHELL = @SHELL@
+
+SOURCES = h5dump.c h5dumpgentest.c
 
 srcdir = @srcdir@
 top_srcdir = @top_srcdir@
 VPATH = @srcdir@
-prefix = @prefix@
-exec_prefix = @exec_prefix@
-
-bindir = @bindir@
-sbindir = @sbindir@
-libexecdir = @libexecdir@
-datadir = @datadir@
-sysconfdir = @sysconfdir@
-sharedstatedir = @sharedstatedir@
-localstatedir = @localstatedir@
-libdir = @libdir@
-infodir = @infodir@
-mandir = @mandir@
-oldincludedir = /usr/include
 pkgdatadir = $(datadir)/@PACKAGE@
 pkglibdir = $(libdir)/@PACKAGE@
 pkgincludedir = $(includedir)/@PACKAGE@
 top_builddir = ../..
-
 am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
 INSTALL = @INSTALL@
-INSTALL_PROGRAM = @INSTALL_PROGRAM@
-INSTALL_DATA = @INSTALL_DATA@
 install_sh_DATA = $(install_sh) -c -m 644
 install_sh_PROGRAM = $(install_sh) -c
 install_sh_SCRIPT = $(install_sh) -c
-INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_HEADER = $(INSTALL_DATA)
-transform = @program_transform_name@
+transform = $(program_transform_name)
 NORMAL_INSTALL = :
 PRE_INSTALL = :
 POST_INSTALL = :
 NORMAL_UNINSTALL = :
 PRE_UNINSTALL = :
 POST_UNINSTALL = :
-host_alias = @host_alias@
+build_triplet = @build@
 host_triplet = @host@
-
-EXEEXT = @EXEEXT@
-OBJEXT = @OBJEXT@
-PATH_SEPARATOR = @PATH_SEPARATOR@
-
-# Install directories that automake doesn't know about
-includedir = $(exec_prefix)/include
-
+DIST_COMMON = $(srcdir)/Makefile.am $(srcdir)/Makefile.in \
+	$(srcdir)/testh5dump.sh.in $(top_srcdir)/config/commence.am \
+	$(top_srcdir)/config/conclude.am
+check_PROGRAMS = $(am__EXEEXT_1)
+bin_PROGRAMS = h5dump$(EXEEXT)
+subdir = tools/h5dump
+ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
+am__aclocal_m4_deps = $(top_srcdir)/configure.in
+am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+	$(ACLOCAL_M4)
+mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
+CONFIG_HEADER = $(top_builddir)/src/H5config.h
+CONFIG_CLEAN_FILES = testh5dump.sh
+am__installdirs = "$(DESTDIR)$(bindir)"
+binPROGRAMS_INSTALL = $(INSTALL_PROGRAM)
+am__EXEEXT_1 = h5dumpgentest$(EXEEXT)
+PROGRAMS = $(bin_PROGRAMS)
+h5dump_SOURCES = h5dump.c
+h5dump_OBJECTS = h5dump.$(OBJEXT)
+h5dump_LDADD = $(LDADD)
+am__DEPENDENCIES_1 = $(top_builddir)/tools/lib/libh5tools.la
+am__DEPENDENCIES_2 = $(top_builddir)/src/libhdf5.la
+h5dump_DEPENDENCIES = $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_2)
+h5dumpgentest_SOURCES = h5dumpgentest.c
+h5dumpgentest_OBJECTS = h5dumpgentest.$(OBJEXT)
+h5dumpgentest_LDADD = $(LDADD)
+h5dumpgentest_DEPENDENCIES = $(am__DEPENDENCIES_1) \
+	$(am__DEPENDENCIES_2)
+DEFAULT_INCLUDES = -I. -I$(srcdir) -I$(top_builddir)/src
+depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
+am__depfiles_maybe = depfiles
+COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
+	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
+LTCOMPILE = $(LIBTOOL) --tag=CC --mode=compile $(CC) $(DEFS) \
+	$(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
+	$(AM_CFLAGS) $(CFLAGS)
+CCLD = $(CC)
+LINK = $(LIBTOOL) --tag=CC --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
+	$(AM_LDFLAGS) $(LDFLAGS) -o $@
+SOURCES = h5dump.c h5dumpgentest.c
+DIST_SOURCES = h5dump.c h5dumpgentest.c
+ETAGS = etags
+CTAGS = ctags
+DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
 
 # Set the paths for autotools to be correct on heping.
 # Ideally, these tools should never be needed during the build.
 ACLOCAL = /usr/bin/aclocal
-AUTOCONF = /usr/local/autoconf-2.59/bin/autoconf
-AUTOMAKE = /usr/bin/automake
-AUTOHEADER = /usr/local/autoconf-2.59/bin/autoheader
 ADD_PARALLEL_FILES = @ADD_PARALLEL_FILES@
+AMDEP_FALSE = @AMDEP_FALSE@
+AMDEP_TRUE = @AMDEP_TRUE@
 AMTAR = @AMTAR@
 AM_MAKEFLAGS = @AM_MAKEFLAGS@
 AR = @AR@
-AS = @AS@
+AUTOCONF = /usr/local/autoconf-2.59/bin/autoconf
+AUTOHEADER = /usr/local/autoconf-2.59/bin/autoheader
+AUTOMAKE = /usr/bin/automake
 AWK = @AWK@
+BUILD_CXX_CONDITIONAL_FALSE = @BUILD_CXX_CONDITIONAL_FALSE@
+BUILD_CXX_CONDITIONAL_TRUE = @BUILD_CXX_CONDITIONAL_TRUE@
+BUILD_FORTRAN_CONDITIONAL_FALSE = @BUILD_FORTRAN_CONDITIONAL_FALSE@
+BUILD_FORTRAN_CONDITIONAL_TRUE = @BUILD_FORTRAN_CONDITIONAL_TRUE@
+BUILD_HDF5_HL_CONDITIONAL_FALSE = @BUILD_HDF5_HL_CONDITIONAL_FALSE@
+BUILD_HDF5_HL_CONDITIONAL_TRUE = @BUILD_HDF5_HL_CONDITIONAL_TRUE@
+BUILD_PABLO_CONDITIONAL_FALSE = @BUILD_PABLO_CONDITIONAL_FALSE@
+BUILD_PABLO_CONDITIONAL_TRUE = @BUILD_PABLO_CONDITIONAL_TRUE@
+BUILD_PARALLEL_CONDITIONAL_FALSE = @BUILD_PARALLEL_CONDITIONAL_FALSE@
+BUILD_PARALLEL_CONDITIONAL_TRUE = @BUILD_PARALLEL_CONDITIONAL_TRUE@
 BUILD_PDB2HDF = @BUILD_PDB2HDF@
+BUILD_PDB2HDF_CONDITIONAL_FALSE = @BUILD_PDB2HDF_CONDITIONAL_FALSE@
+BUILD_PDB2HDF_CONDITIONAL_TRUE = @BUILD_PDB2HDF_CONDITIONAL_TRUE@
 BYTESEX = @BYTESEX@
 CC = @CC@
+CCDEPMODE = @CCDEPMODE@
 CC_VERSION = @CC_VERSION@
+CFLAGS = @CFLAGS@
 CONFIG_DATE = @CONFIG_DATE@
 CONFIG_MODE = @CONFIG_MODE@
 CONFIG_USER = @CONFIG_USER@
+CPP = @CPP@
 CPPFLAGS = @CPPFLAGS@
 CXX = @CXX@
 CXXCPP = @CXXCPP@
+CXXDEPMODE = @CXXDEPMODE@
+CXXFLAGS = @CXXFLAGS@
+CYGPATH_W = @CYGPATH_W@
 DEBUG_PKG = @DEBUG_PKG@
+DEFS = @DEFS@
 DEPDIR = @DEPDIR@
-DLLTOOL = @DLLTOOL@
 DYNAMIC_DIRS = @DYNAMIC_DIRS@
 ECHO = @ECHO@
+ECHO_C = @ECHO_C@
+ECHO_N = @ECHO_N@
+ECHO_T = @ECHO_T@
 EGREP = @EGREP@
+EXEEXT = @EXEEXT@
 F77 = @F77@
+
+# Make sure that these variables are exported to the Makefiles
+F9XMODEXT = @F9XMODEXT@
+F9XMODFLAG = @F9XMODFLAG@
 F9XSUFFIXFLAG = @F9XSUFFIXFLAG@
 FC = @FC@
+FCFLAGS = @FCFLAGS@
 FFLAGS = @FFLAGS@
 FILTERS = @FILTERS@
 FSEARCH_DIRS = @FSEARCH_DIRS@
-GCJ = @GCJ@
-GCJFLAGS = @GCJFLAGS@
 H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
 HDF5_INTERFACES = @HDF5_INTERFACES@
@@ -125,21 +170,36 @@ HL_FOR = @HL_FOR@
 HSIZET = @HSIZET@
 HSIZE_T = @HSIZE_T@
 HSSIZE_T = @HSSIZE_T@
+INSTALL_DATA = @INSTALL_DATA@
+INSTALL_PROGRAM = @INSTALL_PROGRAM@
+INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
 INSTRUMENT_LIBRARY = @INSTRUMENT_LIBRARY@
+LDFLAGS = @LDFLAGS@
+LIBOBJS = @LIBOBJS@
+LIBS = @LIBS@
 LIBTOOL = @LIBTOOL@
 LN_S = @LN_S@
+LTLIBOBJS = @LTLIBOBJS@
 LT_STATIC_EXEC = @LT_STATIC_EXEC@
 MAINT = @MAINT@
+MAINTAINER_MODE_FALSE = @MAINTAINER_MODE_FALSE@
+MAINTAINER_MODE_TRUE = @MAINTAINER_MODE_TRUE@
+MAKEINFO = @MAKEINFO@
 MPE = @MPE@
-OBJDUMP = @OBJDUMP@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
+OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
+PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@
+PACKAGE_NAME = @PACKAGE_NAME@
+PACKAGE_STRING = @PACKAGE_STRING@
+PACKAGE_TARNAME = @PACKAGE_TARNAME@
+PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
+PATH_SEPARATOR = @PATH_SEPARATOR@
 PERL = @PERL@
 PTHREAD = @PTHREAD@
 RANLIB = @RANLIB@
-RC = @RC@
 ROOT = @ROOT@
 RUNPARALLEL = @RUNPARALLEL@
 RUNSERIAL = @RUNSERIAL@
@@ -147,6 +207,8 @@ R_INTEGER = @R_INTEGER@
 R_LARGE = @R_LARGE@
 SEARCH = @SEARCH@
 SETX = @SETX@
+SET_MAKE = @SET_MAKE@
+SHELL = @SHELL@
 SIZE_T = @SIZE_T@
 SRB = @SRB@
 STATIC_SHARED = @STATIC_SHARED@
@@ -161,9 +223,52 @@ USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@
 USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@
 USE_FILTER_SZIP = @USE_FILTER_SZIP@
 VERSION = @VERSION@
+ac_ct_AR = @ac_ct_AR@
+ac_ct_CC = @ac_ct_CC@
+ac_ct_CXX = @ac_ct_CXX@
+ac_ct_F77 = @ac_ct_F77@
+ac_ct_FC = @ac_ct_FC@
+ac_ct_RANLIB = @ac_ct_RANLIB@
+ac_ct_STRIP = @ac_ct_STRIP@
+am__fastdepCC_FALSE = @am__fastdepCC_FALSE@
+am__fastdepCC_TRUE = @am__fastdepCC_TRUE@
+am__fastdepCXX_FALSE = @am__fastdepCXX_FALSE@
+am__fastdepCXX_TRUE = @am__fastdepCXX_TRUE@
 am__include = @am__include@
+am__leading_dot = @am__leading_dot@
 am__quote = @am__quote@
+am__tar = @am__tar@
+am__untar = @am__untar@
+bindir = @bindir@
+build = @build@
+build_alias = @build_alias@
+build_cpu = @build_cpu@
+build_os = @build_os@
+build_vendor = @build_vendor@
+datadir = @datadir@
+exec_prefix = @exec_prefix@
+host = @host@
+host_alias = @host_alias@
+host_cpu = @host_cpu@
+host_os = @host_os@
+host_vendor = @host_vendor@
+
+# Install directories that automake doesn't know about
+includedir = $(exec_prefix)/include
+infodir = @infodir@
 install_sh = @install_sh@
+libdir = @libdir@
+libexecdir = @libexecdir@
+localstatedir = @localstatedir@
+mandir = @mandir@
+mkdir_p = @mkdir_p@
+oldincludedir = @oldincludedir@
+prefix = @prefix@
+program_transform_name = @program_transform_name@
+sbindir = @sbindir@
+sharedstatedir = @sharedstatedir@
+sysconfdir = @sysconfdir@
+target_alias = @target_alias@
 
 # Shell commands used in Makefiles
 RM = rm -f
@@ -186,23 +291,14 @@ H5CC_PP = $(bindir)/h5pcc
 H5FC = $(bindir)/h5fc
 H5FC_PP = $(bindir)/h5pfc
 
-# Make sure that these variables are exported to the Makefiles
-F9XMODEXT = @F9XMODEXT@
-F9XMODFLAG = @F9XMODFLAG@
-
 # Include files in /src directory and /tools/lib directory
 INCLUDES = -I$(top_srcdir)/src -I$(top_srcdir)/tools/lib
 
 # Test programs and scripts
 TEST_PROG = h5dumpgentest
 TEST_SCRIPT = testh5dump.sh $(top_srcdir)/tools/h5dump/testh5dumpxml.sh
-
-check_PROGRAMS = $(TEST_PROG)
 check_SCRIPTS = $(TEST_SCRIPT)
 
-# Our main target, the h5dump tool.
-bin_PROGRAMS = h5dump
-
 # All the programs depend on the hdf5 and h5tools libraries
 LDADD = $(LIBH5TOOLS) $(LIBHDF5)
 
@@ -223,70 +319,52 @@ PROGS = $(bin_PROGRAMS) $(bin_SCRIPTS) $(noinst_PROGRAMS) $(noinst_SCRIPTS)   \
         $(EXTRA_PROG)
 
 TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST) 
-subdir = tools/h5dump
-mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
-CONFIG_HEADER = $(top_builddir)/src/H5config.h
-CONFIG_CLEAN_FILES = testh5dump.sh
-bin_PROGRAMS = h5dump$(EXEEXT)
-check_PROGRAMS = h5dumpgentest$(EXEEXT)
-PROGRAMS = $(bin_PROGRAMS)
-
-h5dump_SOURCES = h5dump.c
-h5dump_OBJECTS = h5dump.$(OBJEXT)
-h5dump_LDADD = $(LDADD)
-h5dump_DEPENDENCIES = $(top_builddir)/tools/lib/libh5tools.la \
-	$(top_builddir)/src/libhdf5.la
-h5dump_LDFLAGS =
-h5dumpgentest_SOURCES = h5dumpgentest.c
-h5dumpgentest_OBJECTS = h5dumpgentest.$(OBJEXT)
-h5dumpgentest_LDADD = $(LDADD)
-h5dumpgentest_DEPENDENCIES = $(top_builddir)/tools/lib/libh5tools.la \
-	$(top_builddir)/src/libhdf5.la
-h5dumpgentest_LDFLAGS =
-
-DEFS = @DEFS@
-DEFAULT_INCLUDES =  -I. -I$(srcdir) -I$(top_builddir)/src
-LDFLAGS = @LDFLAGS@
-LIBS = @LIBS@
-depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
-am__depfiles_maybe = depfiles
-@AMDEP_TRUE@DEP_FILES = ./$(DEPDIR)/h5dump.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/h5dumpgentest.Po
-COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
-	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
-LTCOMPILE = $(LIBTOOL) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) \
-	$(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
-CCLD = $(CC)
-LINK = $(LIBTOOL) --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
-	$(AM_LDFLAGS) $(LDFLAGS) -o $@
-CFLAGS = @CFLAGS@
-DIST_SOURCES = h5dump.c h5dumpgentest.c
-DIST_COMMON = Makefile.am Makefile.in testh5dump.sh.in
-SOURCES = h5dump.c h5dumpgentest.c
-
 all: all-am
 
 .SUFFIXES:
 .SUFFIXES: .c .lo .o .obj
-$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(top_srcdir)/configure.in $(ACLOCAL_M4)
+$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(am__configure_deps)
+	@for dep in $?; do \
+	  case '$(am__configure_deps)' in \
+	    *$$dep*) \
+	      cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh \
+		&& exit 0; \
+	      exit 1;; \
+	  esac; \
+	done; \
+	echo ' cd $(top_srcdir) && $(AUTOMAKE) --foreign  tools/h5dump/Makefile'; \
 	cd $(top_srcdir) && \
 	  $(AUTOMAKE) --foreign  tools/h5dump/Makefile
-Makefile: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.in  $(top_builddir)/config.status
-	cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)
-testh5dump.sh: $(top_builddir)/config.status testh5dump.sh.in
+.PRECIOUS: Makefile
+Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+	@case '$?' in \
+	  *config.status*) \
+	    cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh;; \
+	  *) \
+	    echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)'; \
+	    cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe);; \
+	esac;
+
+$(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+
+$(top_srcdir)/configure: @MAINTAINER_MODE_TRUE@ $(am__configure_deps)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+$(ACLOCAL_M4): @MAINTAINER_MODE_TRUE@ $(am__aclocal_m4_deps)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+testh5dump.sh: $(top_builddir)/config.status $(srcdir)/testh5dump.sh.in
 	cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@
-binPROGRAMS_INSTALL = $(INSTALL_PROGRAM)
 install-binPROGRAMS: $(bin_PROGRAMS)
 	@$(NORMAL_INSTALL)
-	$(mkinstalldirs) $(DESTDIR)$(bindir)
+	test -z "$(bindir)" || $(mkdir_p) "$(DESTDIR)$(bindir)"
 	@list='$(bin_PROGRAMS)'; for p in $$list; do \
 	  p1=`echo $$p|sed 's/$(EXEEXT)$$//'`; \
 	  if test -f $$p \
 	     || test -f $$p1 \
 	  ; then \
 	    f=`echo "$$p1" | sed 's,^.*/,,;$(transform);s/$$/$(EXEEXT)/'`; \
-	   echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) $$p $(DESTDIR)$(bindir)/$$f"; \
-	   $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) $$p $(DESTDIR)$(bindir)/$$f; \
+	   echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) '$$p' '$(DESTDIR)$(bindir)/$$f'"; \
+	   $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) "$$p" "$(DESTDIR)$(bindir)/$$f" || exit 1; \
 	  else :; fi; \
 	done
 
@@ -294,8 +372,8 @@ uninstall-binPROGRAMS:
 	@$(NORMAL_UNINSTALL)
 	@list='$(bin_PROGRAMS)'; for p in $$list; do \
 	  f=`echo "$$p" | sed 's,^.*/,,;s/$(EXEEXT)$$//;$(transform);s/$$/$(EXEEXT)/'`; \
-	  echo " rm -f $(DESTDIR)$(bindir)/$$f"; \
-	  rm -f $(DESTDIR)$(bindir)/$$f; \
+	  echo " rm -f '$(DESTDIR)$(bindir)/$$f'"; \
+	  rm -f "$(DESTDIR)$(bindir)/$$f"; \
 	done
 
 clean-binPROGRAMS:
@@ -319,7 +397,7 @@ h5dumpgentest$(EXEEXT): $(h5dumpgentest_OBJECTS) $(h5dumpgentest_DEPENDENCIES)
 	$(LINK) $(h5dumpgentest_LDFLAGS) $(h5dumpgentest_OBJECTS) $(h5dumpgentest_LDADD) $(LIBS)
 
 mostlyclean-compile:
-	-rm -f *.$(OBJEXT) core *.core
+	-rm -f *.$(OBJEXT)
 
 distclean-compile:
 	-rm -f *.tab.c
@@ -327,27 +405,26 @@ distclean-compile:
 @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/h5dump.Po@am__quote@
 @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/h5dumpgentest.Po@am__quote@
 
-distclean-depend:
-	-rm -rf ./$(DEPDIR)
-
 .c.o:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Po' tmpdepfile='$(DEPDIR)/$*.TPo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(COMPILE) -c `test -f '$<' || echo '$(srcdir)/'`$<
+@am__fastdepCC_TRUE@	if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ $<; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(COMPILE) -c $<
 
 .c.obj:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Po' tmpdepfile='$(DEPDIR)/$*.TPo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(COMPILE) -c `cygpath -w $<`
+@am__fastdepCC_TRUE@	if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ `$(CYGPATH_W) '$<'`; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(COMPILE) -c `$(CYGPATH_W) '$<'`
 
 .c.lo:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Plo' tmpdepfile='$(DEPDIR)/$*.TPlo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(LTCOMPILE) -c -o $@ `test -f '$<' || echo '$(srcdir)/'`$<
-CCDEPMODE = @CCDEPMODE@
+@am__fastdepCC_TRUE@	if $(LTCOMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ $<; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Plo"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(LTCOMPILE) -c -o $@ $<
 
 mostlyclean-libtool:
 	-rm -f *.lo
@@ -359,11 +436,6 @@ distclean-libtool:
 	-rm -f libtool
 uninstall-info-am:
 
-ETAGS = etags
-ETAGSFLAGS =
-
-tags: TAGS
-
 ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
@@ -372,6 +444,7 @@ ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	  $(AWK) '    { files[$$0] = 1; } \
 	       END { for (i in files) print i; }'`; \
 	mkid -fID $$unique
+tags: TAGS
 
 TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
@@ -383,8 +456,24 @@ TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 	  done | \
 	  $(AWK) '    { files[$$0] = 1; } \
 	       END { for (i in files) print i; }'`; \
-	test -z "$(ETAGS_ARGS)$$tags$$unique" \
-	  || $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
+	  test -n "$$unique" || unique=$$empty_fix; \
+	  $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	    $$tags $$unique; \
+	fi
+ctags: CTAGS
+CTAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
+		$(TAGS_FILES) $(LISP)
+	tags=; \
+	here=`pwd`; \
+	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
+	unique=`for i in $$list; do \
+	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
+	  done | \
+	  $(AWK) '    { files[$$0] = 1; } \
+	       END { for (i in files) print i; }'`; \
+	test -z "$(CTAGS_ARGS)$$tags$$unique" \
+	  || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
 	     $$tags $$unique
 
 GTAGS:
@@ -393,19 +482,22 @@ GTAGS:
 	  && gtags -i $(GTAGS_ARGS) $$here
 
 distclean-tags:
-	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH
-DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
-
-top_distdir = ../..
-distdir = $(top_distdir)/$(PACKAGE)-$(VERSION)
+	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
 
 distdir: $(DISTFILES)
-	@list='$(DISTFILES)'; for file in $$list; do \
+	$(mkdir_p) $(distdir)/../../config
+	@srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`; \
+	topsrcdirstrip=`echo "$(top_srcdir)" | sed 's|.|.|g'`; \
+	list='$(DISTFILES)'; for file in $$list; do \
+	  case $$file in \
+	    $(srcdir)/*) file=`echo "$$file" | sed "s|^$$srcdirstrip/||"`;; \
+	    $(top_srcdir)/*) file=`echo "$$file" | sed "s|^$$topsrcdirstrip/|$(top_builddir)/|"`;; \
+	  esac; \
 	  if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
 	  dir=`echo "$$file" | sed -e 's,/[^/]*$$,,'`; \
 	  if test "$$dir" != "$$file" && test "$$dir" != "."; then \
 	    dir="/$$dir"; \
-	    $(mkinstalldirs) "$(distdir)$$dir"; \
+	    $(mkdir_p) "$(distdir)$$dir"; \
 	  else \
 	    dir=''; \
 	  fi; \
@@ -425,10 +517,10 @@ check-am: all-am
 	$(MAKE) $(AM_MAKEFLAGS) check-TESTS
 check: check-am
 all-am: Makefile $(PROGRAMS) all-local
-
 installdirs:
-	$(mkinstalldirs) $(DESTDIR)$(bindir)
-
+	for dir in "$(DESTDIR)$(bindir)"; do \
+	  test -z "$$dir" || $(mkdir_p) "$$dir"; \
+	done
 install: install-am
 install-exec: install-exec-am
 install-data: install-data-am
@@ -440,7 +532,7 @@ install-am: all-am
 installcheck: installcheck-am
 install-strip:
 	$(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
-	  INSTALL_STRIP_FLAG=-s \
+	  install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
 	  `test -z '$(STRIP)' || \
 	    echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install
 mostlyclean-generic:
@@ -449,7 +541,7 @@ mostlyclean-generic:
 clean-generic:
 
 distclean-generic:
-	-rm -f Makefile $(CONFIG_CLEAN_FILES)
+	-test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
 	-test -z "$(DISTCLEANFILES)" || rm -f $(DISTCLEANFILES)
 
 maintainer-clean-generic:
@@ -461,14 +553,17 @@ clean-am: clean-binPROGRAMS clean-checkPROGRAMS clean-generic \
 	clean-libtool mostlyclean-am
 
 distclean: distclean-am
-
-distclean-am: clean-am distclean-compile distclean-depend \
-	distclean-generic distclean-libtool distclean-tags
+	-rm -rf ./$(DEPDIR)
+	-rm -f Makefile
+distclean-am: clean-am distclean-compile distclean-generic \
+	distclean-libtool distclean-tags
 
 dvi: dvi-am
 
 dvi-am:
 
+html: html-am
+
 info: info-am
 
 info-am:
@@ -484,7 +579,8 @@ install-man:
 installcheck-am:
 
 maintainer-clean: maintainer-clean-am
-
+	-rm -rf ./$(DEPDIR)
+	-rm -f Makefile
 maintainer-clean-am: distclean-am maintainer-clean-generic
 
 mostlyclean: mostlyclean-am
@@ -492,19 +588,28 @@ mostlyclean: mostlyclean-am
 mostlyclean-am: mostlyclean-compile mostlyclean-generic \
 	mostlyclean-libtool
 
+pdf: pdf-am
+
+pdf-am:
+
+ps: ps-am
+
+ps-am:
+
 uninstall-am: uninstall-binPROGRAMS uninstall-info-am
 
-.PHONY: GTAGS all all-am all-local check check-TESTS check-am clean \
-	clean-binPROGRAMS clean-checkPROGRAMS clean-generic \
-	clean-libtool distclean distclean-compile distclean-depend \
+.PHONY: CTAGS GTAGS all all-am all-local check check-TESTS check-am \
+	clean clean-binPROGRAMS clean-checkPROGRAMS clean-generic \
+	clean-libtool ctags distclean distclean-compile \
 	distclean-generic distclean-libtool distclean-tags distdir dvi \
-	dvi-am info info-am install install-am install-binPROGRAMS \
-	install-data install-data-am install-exec install-exec-am \
-	install-info install-info-am install-man install-strip \
-	installcheck installcheck-am installdirs maintainer-clean \
-	maintainer-clean-generic mostlyclean mostlyclean-compile \
-	mostlyclean-generic mostlyclean-libtool tags uninstall \
-	uninstall-am uninstall-binPROGRAMS uninstall-info-am
+	dvi-am html html-am info info-am install install-am \
+	install-binPROGRAMS install-data install-data-am install-exec \
+	install-exec-am install-info install-info-am install-man \
+	install-strip installcheck installcheck-am installdirs \
+	maintainer-clean maintainer-clean-generic mostlyclean \
+	mostlyclean-compile mostlyclean-generic mostlyclean-libtool \
+	pdf pdf-am ps ps-am tags uninstall uninstall-am \
+	uninstall-binPROGRAMS uninstall-info-am
 
 
 # lib/progs/tests targets recurse into subdirectories. build-* targets
diff --git a/tools/h5import/Makefile.in b/tools/h5import/Makefile.in
index 0198875..f7cad78 100755
--- a/tools/h5import/Makefile.in
+++ b/tools/h5import/Makefile.in
@@ -1,8 +1,8 @@
-# Makefile.in generated by automake 1.6.3 from Makefile.am.
+# Makefile.in generated by automake 1.9.5 from Makefile.am.
 # @configure_input@
 
-# Copyright 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002
-# Free Software Foundation, Inc.
+# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
+# 2003, 2004, 2005  Free Software Foundation, Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -29,93 +29,138 @@
 #
 # HDF5 Library Makefile(.in)
 #
-SHELL = @SHELL@
+
+SOURCES = h5import.c h5importtest.c
 
 srcdir = @srcdir@
 top_srcdir = @top_srcdir@
 VPATH = @srcdir@
-prefix = @prefix@
-exec_prefix = @exec_prefix@
-
-bindir = @bindir@
-sbindir = @sbindir@
-libexecdir = @libexecdir@
-datadir = @datadir@
-sysconfdir = @sysconfdir@
-sharedstatedir = @sharedstatedir@
-localstatedir = @localstatedir@
-libdir = @libdir@
-infodir = @infodir@
-mandir = @mandir@
-oldincludedir = /usr/include
 pkgdatadir = $(datadir)/@PACKAGE@
 pkglibdir = $(libdir)/@PACKAGE@
 pkgincludedir = $(includedir)/@PACKAGE@
 top_builddir = ../..
-
 am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
 INSTALL = @INSTALL@
-INSTALL_PROGRAM = @INSTALL_PROGRAM@
-INSTALL_DATA = @INSTALL_DATA@
 install_sh_DATA = $(install_sh) -c -m 644
 install_sh_PROGRAM = $(install_sh) -c
 install_sh_SCRIPT = $(install_sh) -c
-INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_HEADER = $(INSTALL_DATA)
-transform = @program_transform_name@
+transform = $(program_transform_name)
 NORMAL_INSTALL = :
 PRE_INSTALL = :
 POST_INSTALL = :
 NORMAL_UNINSTALL = :
 PRE_UNINSTALL = :
 POST_UNINSTALL = :
-host_alias = @host_alias@
+build_triplet = @build@
 host_triplet = @host@
-
-EXEEXT = @EXEEXT@
-OBJEXT = @OBJEXT@
-PATH_SEPARATOR = @PATH_SEPARATOR@
-
-# Install directories that automake doesn't know about
-includedir = $(exec_prefix)/include
-
+DIST_COMMON = $(srcdir)/Makefile.am $(srcdir)/Makefile.in \
+	$(top_srcdir)/config/commence.am \
+	$(top_srcdir)/config/conclude.am
+check_PROGRAMS = $(am__EXEEXT_1)
+bin_PROGRAMS = h5import$(EXEEXT)
+subdir = tools/h5import
+ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
+am__aclocal_m4_deps = $(top_srcdir)/configure.in
+am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+	$(ACLOCAL_M4)
+mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
+CONFIG_HEADER = $(top_builddir)/src/H5config.h
+CONFIG_CLEAN_FILES =
+am__installdirs = "$(DESTDIR)$(bindir)"
+binPROGRAMS_INSTALL = $(INSTALL_PROGRAM)
+am__EXEEXT_1 = h5importtest$(EXEEXT)
+PROGRAMS = $(bin_PROGRAMS)
+h5import_SOURCES = h5import.c
+h5import_OBJECTS = h5import.$(OBJEXT)
+h5import_LDADD = $(LDADD)
+am__DEPENDENCIES_1 = $(top_builddir)/src/libhdf5.la
+am__DEPENDENCIES_2 = $(top_builddir)/tools/lib/libh5tools.la
+h5import_DEPENDENCIES = $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_2)
+h5importtest_SOURCES = h5importtest.c
+h5importtest_OBJECTS = h5importtest.$(OBJEXT)
+h5importtest_LDADD = $(LDADD)
+h5importtest_DEPENDENCIES = $(am__DEPENDENCIES_1) \
+	$(am__DEPENDENCIES_2)
+DEFAULT_INCLUDES = -I. -I$(srcdir) -I$(top_builddir)/src
+depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
+am__depfiles_maybe = depfiles
+COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
+	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
+LTCOMPILE = $(LIBTOOL) --tag=CC --mode=compile $(CC) $(DEFS) \
+	$(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
+	$(AM_CFLAGS) $(CFLAGS)
+CCLD = $(CC)
+LINK = $(LIBTOOL) --tag=CC --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
+	$(AM_LDFLAGS) $(LDFLAGS) -o $@
+SOURCES = h5import.c h5importtest.c
+DIST_SOURCES = h5import.c h5importtest.c
+ETAGS = etags
+CTAGS = ctags
+DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
 
 # Set the paths for autotools to be correct on heping.
 # Ideally, these tools should never be needed during the build.
 ACLOCAL = /usr/bin/aclocal
-AUTOCONF = /usr/local/autoconf-2.59/bin/autoconf
-AUTOMAKE = /usr/bin/automake
-AUTOHEADER = /usr/local/autoconf-2.59/bin/autoheader
 ADD_PARALLEL_FILES = @ADD_PARALLEL_FILES@
+AMDEP_FALSE = @AMDEP_FALSE@
+AMDEP_TRUE = @AMDEP_TRUE@
 AMTAR = @AMTAR@
 AM_MAKEFLAGS = @AM_MAKEFLAGS@
 AR = @AR@
-AS = @AS@
+AUTOCONF = /usr/local/autoconf-2.59/bin/autoconf
+AUTOHEADER = /usr/local/autoconf-2.59/bin/autoheader
+AUTOMAKE = /usr/bin/automake
 AWK = @AWK@
+BUILD_CXX_CONDITIONAL_FALSE = @BUILD_CXX_CONDITIONAL_FALSE@
+BUILD_CXX_CONDITIONAL_TRUE = @BUILD_CXX_CONDITIONAL_TRUE@
+BUILD_FORTRAN_CONDITIONAL_FALSE = @BUILD_FORTRAN_CONDITIONAL_FALSE@
+BUILD_FORTRAN_CONDITIONAL_TRUE = @BUILD_FORTRAN_CONDITIONAL_TRUE@
+BUILD_HDF5_HL_CONDITIONAL_FALSE = @BUILD_HDF5_HL_CONDITIONAL_FALSE@
+BUILD_HDF5_HL_CONDITIONAL_TRUE = @BUILD_HDF5_HL_CONDITIONAL_TRUE@
+BUILD_PABLO_CONDITIONAL_FALSE = @BUILD_PABLO_CONDITIONAL_FALSE@
+BUILD_PABLO_CONDITIONAL_TRUE = @BUILD_PABLO_CONDITIONAL_TRUE@
+BUILD_PARALLEL_CONDITIONAL_FALSE = @BUILD_PARALLEL_CONDITIONAL_FALSE@
+BUILD_PARALLEL_CONDITIONAL_TRUE = @BUILD_PARALLEL_CONDITIONAL_TRUE@
 BUILD_PDB2HDF = @BUILD_PDB2HDF@
+BUILD_PDB2HDF_CONDITIONAL_FALSE = @BUILD_PDB2HDF_CONDITIONAL_FALSE@
+BUILD_PDB2HDF_CONDITIONAL_TRUE = @BUILD_PDB2HDF_CONDITIONAL_TRUE@
 BYTESEX = @BYTESEX@
 CC = @CC@
+CCDEPMODE = @CCDEPMODE@
 CC_VERSION = @CC_VERSION@
+CFLAGS = @CFLAGS@
 CONFIG_DATE = @CONFIG_DATE@
 CONFIG_MODE = @CONFIG_MODE@
 CONFIG_USER = @CONFIG_USER@
+CPP = @CPP@
 CPPFLAGS = @CPPFLAGS@
 CXX = @CXX@
 CXXCPP = @CXXCPP@
+CXXDEPMODE = @CXXDEPMODE@
+CXXFLAGS = @CXXFLAGS@
+CYGPATH_W = @CYGPATH_W@
 DEBUG_PKG = @DEBUG_PKG@
+DEFS = @DEFS@
 DEPDIR = @DEPDIR@
-DLLTOOL = @DLLTOOL@
 DYNAMIC_DIRS = @DYNAMIC_DIRS@
 ECHO = @ECHO@
+ECHO_C = @ECHO_C@
+ECHO_N = @ECHO_N@
+ECHO_T = @ECHO_T@
 EGREP = @EGREP@
+EXEEXT = @EXEEXT@
 F77 = @F77@
+
+# Make sure that these variables are exported to the Makefiles
+F9XMODEXT = @F9XMODEXT@
+F9XMODFLAG = @F9XMODFLAG@
 F9XSUFFIXFLAG = @F9XSUFFIXFLAG@
 FC = @FC@
+FCFLAGS = @FCFLAGS@
 FFLAGS = @FFLAGS@
 FILTERS = @FILTERS@
 FSEARCH_DIRS = @FSEARCH_DIRS@
-GCJ = @GCJ@
-GCJFLAGS = @GCJFLAGS@
 H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
 HDF5_INTERFACES = @HDF5_INTERFACES@
@@ -125,21 +170,36 @@ HL_FOR = @HL_FOR@
 HSIZET = @HSIZET@
 HSIZE_T = @HSIZE_T@
 HSSIZE_T = @HSSIZE_T@
+INSTALL_DATA = @INSTALL_DATA@
+INSTALL_PROGRAM = @INSTALL_PROGRAM@
+INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
 INSTRUMENT_LIBRARY = @INSTRUMENT_LIBRARY@
+LDFLAGS = @LDFLAGS@
+LIBOBJS = @LIBOBJS@
+LIBS = @LIBS@
 LIBTOOL = @LIBTOOL@
 LN_S = @LN_S@
+LTLIBOBJS = @LTLIBOBJS@
 LT_STATIC_EXEC = @LT_STATIC_EXEC@
 MAINT = @MAINT@
+MAINTAINER_MODE_FALSE = @MAINTAINER_MODE_FALSE@
+MAINTAINER_MODE_TRUE = @MAINTAINER_MODE_TRUE@
+MAKEINFO = @MAKEINFO@
 MPE = @MPE@
-OBJDUMP = @OBJDUMP@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
+OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
+PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@
+PACKAGE_NAME = @PACKAGE_NAME@
+PACKAGE_STRING = @PACKAGE_STRING@
+PACKAGE_TARNAME = @PACKAGE_TARNAME@
+PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
+PATH_SEPARATOR = @PATH_SEPARATOR@
 PERL = @PERL@
 PTHREAD = @PTHREAD@
 RANLIB = @RANLIB@
-RC = @RC@
 ROOT = @ROOT@
 RUNPARALLEL = @RUNPARALLEL@
 RUNSERIAL = @RUNSERIAL@
@@ -147,6 +207,8 @@ R_INTEGER = @R_INTEGER@
 R_LARGE = @R_LARGE@
 SEARCH = @SEARCH@
 SETX = @SETX@
+SET_MAKE = @SET_MAKE@
+SHELL = @SHELL@
 SIZE_T = @SIZE_T@
 SRB = @SRB@
 STATIC_SHARED = @STATIC_SHARED@
@@ -161,9 +223,52 @@ USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@
 USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@
 USE_FILTER_SZIP = @USE_FILTER_SZIP@
 VERSION = @VERSION@
+ac_ct_AR = @ac_ct_AR@
+ac_ct_CC = @ac_ct_CC@
+ac_ct_CXX = @ac_ct_CXX@
+ac_ct_F77 = @ac_ct_F77@
+ac_ct_FC = @ac_ct_FC@
+ac_ct_RANLIB = @ac_ct_RANLIB@
+ac_ct_STRIP = @ac_ct_STRIP@
+am__fastdepCC_FALSE = @am__fastdepCC_FALSE@
+am__fastdepCC_TRUE = @am__fastdepCC_TRUE@
+am__fastdepCXX_FALSE = @am__fastdepCXX_FALSE@
+am__fastdepCXX_TRUE = @am__fastdepCXX_TRUE@
 am__include = @am__include@
+am__leading_dot = @am__leading_dot@
 am__quote = @am__quote@
+am__tar = @am__tar@
+am__untar = @am__untar@
+bindir = @bindir@
+build = @build@
+build_alias = @build_alias@
+build_cpu = @build_cpu@
+build_os = @build_os@
+build_vendor = @build_vendor@
+datadir = @datadir@
+exec_prefix = @exec_prefix@
+host = @host@
+host_alias = @host_alias@
+host_cpu = @host_cpu@
+host_os = @host_os@
+host_vendor = @host_vendor@
+
+# Install directories that automake doesn't know about
+includedir = $(exec_prefix)/include
+infodir = @infodir@
 install_sh = @install_sh@
+libdir = @libdir@
+libexecdir = @libexecdir@
+localstatedir = @localstatedir@
+mandir = @mandir@
+mkdir_p = @mkdir_p@
+oldincludedir = @oldincludedir@
+prefix = @prefix@
+program_transform_name = @program_transform_name@
+sbindir = @sbindir@
+sharedstatedir = @sharedstatedir@
+sysconfdir = @sysconfdir@
+target_alias = @target_alias@
 
 # Shell commands used in Makefiles
 RM = rm -f
@@ -186,23 +291,14 @@ H5CC_PP = $(bindir)/h5pcc
 H5FC = $(bindir)/h5fc
 H5FC_PP = $(bindir)/h5pfc
 
-# Make sure that these variables are exported to the Makefiles
-F9XMODEXT = @F9XMODEXT@
-F9XMODFLAG = @F9XMODFLAG@
-
 # Include src and tools/lib directories
 INCLUDES = -I$(top_srcdir)/src -I$(top_srcdir)/tools/lib
 
 # Test programs and scripts
 TEST_PROG = h5importtest
 TEST_SCRIPT = $(srcdir)/h5importtestutil.sh
-
-check_PROGRAMS = $(TEST_PROG)
 check_SCRIPT = h5importtestutil.sh
 
-# Our main targets
-bin_PROGRAMS = h5import
-
 # All programs depend on the main hdf5 library and the tools library
 LDADD = $(LIBHDF5) $(LIBH5TOOLS)
 
@@ -218,68 +314,50 @@ PROGS = $(bin_PROGRAMS) $(bin_SCRIPTS) $(noinst_PROGRAMS) $(noinst_SCRIPTS)   \
         $(EXTRA_PROG)
 
 TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST) 
-subdir = tools/h5import
-mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
-CONFIG_HEADER = $(top_builddir)/src/H5config.h
-CONFIG_CLEAN_FILES =
-bin_PROGRAMS = h5import$(EXEEXT)
-check_PROGRAMS = h5importtest$(EXEEXT)
-PROGRAMS = $(bin_PROGRAMS)
-
-h5import_SOURCES = h5import.c
-h5import_OBJECTS = h5import.$(OBJEXT)
-h5import_LDADD = $(LDADD)
-h5import_DEPENDENCIES = $(top_builddir)/src/libhdf5.la \
-	$(top_builddir)/tools/lib/libh5tools.la
-h5import_LDFLAGS =
-h5importtest_SOURCES = h5importtest.c
-h5importtest_OBJECTS = h5importtest.$(OBJEXT)
-h5importtest_LDADD = $(LDADD)
-h5importtest_DEPENDENCIES = $(top_builddir)/src/libhdf5.la \
-	$(top_builddir)/tools/lib/libh5tools.la
-h5importtest_LDFLAGS =
-
-DEFS = @DEFS@
-DEFAULT_INCLUDES =  -I. -I$(srcdir) -I$(top_builddir)/src
-LDFLAGS = @LDFLAGS@
-LIBS = @LIBS@
-depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
-am__depfiles_maybe = depfiles
-@AMDEP_TRUE@DEP_FILES = ./$(DEPDIR)/h5import.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/h5importtest.Po
-COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
-	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
-LTCOMPILE = $(LIBTOOL) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) \
-	$(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
-CCLD = $(CC)
-LINK = $(LIBTOOL) --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
-	$(AM_LDFLAGS) $(LDFLAGS) -o $@
-CFLAGS = @CFLAGS@
-DIST_SOURCES = h5import.c h5importtest.c
-DIST_COMMON = Makefile.am Makefile.in
-SOURCES = h5import.c h5importtest.c
-
 all: all-am
 
 .SUFFIXES:
 .SUFFIXES: .c .lo .o .obj
-$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(top_srcdir)/configure.in $(ACLOCAL_M4)
+$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(am__configure_deps)
+	@for dep in $?; do \
+	  case '$(am__configure_deps)' in \
+	    *$$dep*) \
+	      cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh \
+		&& exit 0; \
+	      exit 1;; \
+	  esac; \
+	done; \
+	echo ' cd $(top_srcdir) && $(AUTOMAKE) --foreign  tools/h5import/Makefile'; \
 	cd $(top_srcdir) && \
 	  $(AUTOMAKE) --foreign  tools/h5import/Makefile
-Makefile: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.in  $(top_builddir)/config.status
-	cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)
-binPROGRAMS_INSTALL = $(INSTALL_PROGRAM)
+.PRECIOUS: Makefile
+Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+	@case '$?' in \
+	  *config.status*) \
+	    cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh;; \
+	  *) \
+	    echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)'; \
+	    cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe);; \
+	esac;
+
+$(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+
+$(top_srcdir)/configure: @MAINTAINER_MODE_TRUE@ $(am__configure_deps)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+$(ACLOCAL_M4): @MAINTAINER_MODE_TRUE@ $(am__aclocal_m4_deps)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
 install-binPROGRAMS: $(bin_PROGRAMS)
 	@$(NORMAL_INSTALL)
-	$(mkinstalldirs) $(DESTDIR)$(bindir)
+	test -z "$(bindir)" || $(mkdir_p) "$(DESTDIR)$(bindir)"
 	@list='$(bin_PROGRAMS)'; for p in $$list; do \
 	  p1=`echo $$p|sed 's/$(EXEEXT)$$//'`; \
 	  if test -f $$p \
 	     || test -f $$p1 \
 	  ; then \
 	    f=`echo "$$p1" | sed 's,^.*/,,;$(transform);s/$$/$(EXEEXT)/'`; \
-	   echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) $$p $(DESTDIR)$(bindir)/$$f"; \
-	   $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) $$p $(DESTDIR)$(bindir)/$$f; \
+	   echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) '$$p' '$(DESTDIR)$(bindir)/$$f'"; \
+	   $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) "$$p" "$(DESTDIR)$(bindir)/$$f" || exit 1; \
 	  else :; fi; \
 	done
 
@@ -287,8 +365,8 @@ uninstall-binPROGRAMS:
 	@$(NORMAL_UNINSTALL)
 	@list='$(bin_PROGRAMS)'; for p in $$list; do \
 	  f=`echo "$$p" | sed 's,^.*/,,;s/$(EXEEXT)$$//;$(transform);s/$$/$(EXEEXT)/'`; \
-	  echo " rm -f $(DESTDIR)$(bindir)/$$f"; \
-	  rm -f $(DESTDIR)$(bindir)/$$f; \
+	  echo " rm -f '$(DESTDIR)$(bindir)/$$f'"; \
+	  rm -f "$(DESTDIR)$(bindir)/$$f"; \
 	done
 
 clean-binPROGRAMS:
@@ -312,7 +390,7 @@ h5importtest$(EXEEXT): $(h5importtest_OBJECTS) $(h5importtest_DEPENDENCIES)
 	$(LINK) $(h5importtest_LDFLAGS) $(h5importtest_OBJECTS) $(h5importtest_LDADD) $(LIBS)
 
 mostlyclean-compile:
-	-rm -f *.$(OBJEXT) core *.core
+	-rm -f *.$(OBJEXT)
 
 distclean-compile:
 	-rm -f *.tab.c
@@ -320,27 +398,26 @@ distclean-compile:
 @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/h5import.Po@am__quote@
 @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/h5importtest.Po@am__quote@
 
-distclean-depend:
-	-rm -rf ./$(DEPDIR)
-
 .c.o:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Po' tmpdepfile='$(DEPDIR)/$*.TPo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(COMPILE) -c `test -f '$<' || echo '$(srcdir)/'`$<
+@am__fastdepCC_TRUE@	if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ $<; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(COMPILE) -c $<
 
 .c.obj:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Po' tmpdepfile='$(DEPDIR)/$*.TPo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(COMPILE) -c `cygpath -w $<`
+@am__fastdepCC_TRUE@	if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ `$(CYGPATH_W) '$<'`; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(COMPILE) -c `$(CYGPATH_W) '$<'`
 
 .c.lo:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Plo' tmpdepfile='$(DEPDIR)/$*.TPlo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(LTCOMPILE) -c -o $@ `test -f '$<' || echo '$(srcdir)/'`$<
-CCDEPMODE = @CCDEPMODE@
+@am__fastdepCC_TRUE@	if $(LTCOMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ $<; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Plo"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(LTCOMPILE) -c -o $@ $<
 
 mostlyclean-libtool:
 	-rm -f *.lo
@@ -352,11 +429,6 @@ distclean-libtool:
 	-rm -f libtool
 uninstall-info-am:
 
-ETAGS = etags
-ETAGSFLAGS =
-
-tags: TAGS
-
 ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
@@ -365,6 +437,7 @@ ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	  $(AWK) '    { files[$$0] = 1; } \
 	       END { for (i in files) print i; }'`; \
 	mkid -fID $$unique
+tags: TAGS
 
 TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
@@ -376,8 +449,24 @@ TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 	  done | \
 	  $(AWK) '    { files[$$0] = 1; } \
 	       END { for (i in files) print i; }'`; \
-	test -z "$(ETAGS_ARGS)$$tags$$unique" \
-	  || $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
+	  test -n "$$unique" || unique=$$empty_fix; \
+	  $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	    $$tags $$unique; \
+	fi
+ctags: CTAGS
+CTAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
+		$(TAGS_FILES) $(LISP)
+	tags=; \
+	here=`pwd`; \
+	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
+	unique=`for i in $$list; do \
+	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
+	  done | \
+	  $(AWK) '    { files[$$0] = 1; } \
+	       END { for (i in files) print i; }'`; \
+	test -z "$(CTAGS_ARGS)$$tags$$unique" \
+	  || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
 	     $$tags $$unique
 
 GTAGS:
@@ -386,19 +475,22 @@ GTAGS:
 	  && gtags -i $(GTAGS_ARGS) $$here
 
 distclean-tags:
-	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH
-DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
-
-top_distdir = ../..
-distdir = $(top_distdir)/$(PACKAGE)-$(VERSION)
+	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
 
 distdir: $(DISTFILES)
-	@list='$(DISTFILES)'; for file in $$list; do \
+	$(mkdir_p) $(distdir)/../../config
+	@srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`; \
+	topsrcdirstrip=`echo "$(top_srcdir)" | sed 's|.|.|g'`; \
+	list='$(DISTFILES)'; for file in $$list; do \
+	  case $$file in \
+	    $(srcdir)/*) file=`echo "$$file" | sed "s|^$$srcdirstrip/||"`;; \
+	    $(top_srcdir)/*) file=`echo "$$file" | sed "s|^$$topsrcdirstrip/|$(top_builddir)/|"`;; \
+	  esac; \
 	  if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
 	  dir=`echo "$$file" | sed -e 's,/[^/]*$$,,'`; \
 	  if test "$$dir" != "$$file" && test "$$dir" != "."; then \
 	    dir="/$$dir"; \
-	    $(mkinstalldirs) "$(distdir)$$dir"; \
+	    $(mkdir_p) "$(distdir)$$dir"; \
 	  else \
 	    dir=''; \
 	  fi; \
@@ -418,10 +510,10 @@ check-am: all-am
 	$(MAKE) $(AM_MAKEFLAGS) check-TESTS
 check: check-am
 all-am: Makefile $(PROGRAMS) all-local
-
 installdirs:
-	$(mkinstalldirs) $(DESTDIR)$(bindir)
-
+	for dir in "$(DESTDIR)$(bindir)"; do \
+	  test -z "$$dir" || $(mkdir_p) "$$dir"; \
+	done
 install: install-am
 install-exec: install-exec-am
 install-data: install-data-am
@@ -433,7 +525,7 @@ install-am: all-am
 installcheck: installcheck-am
 install-strip:
 	$(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
-	  INSTALL_STRIP_FLAG=-s \
+	  install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
 	  `test -z '$(STRIP)' || \
 	    echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install
 mostlyclean-generic:
@@ -441,7 +533,7 @@ mostlyclean-generic:
 clean-generic:
 
 distclean-generic:
-	-rm -f Makefile $(CONFIG_CLEAN_FILES)
+	-test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
 
 maintainer-clean-generic:
 	@echo "This command is intended for maintainers to use"
@@ -452,14 +544,17 @@ clean-am: clean-binPROGRAMS clean-checkPROGRAMS clean-generic \
 	clean-libtool mostlyclean-am
 
 distclean: distclean-am
-
-distclean-am: clean-am distclean-compile distclean-depend \
-	distclean-generic distclean-libtool distclean-tags
+	-rm -rf ./$(DEPDIR)
+	-rm -f Makefile
+distclean-am: clean-am distclean-compile distclean-generic \
+	distclean-libtool distclean-tags
 
 dvi: dvi-am
 
 dvi-am:
 
+html: html-am
+
 info: info-am
 
 info-am:
@@ -475,7 +570,8 @@ install-man:
 installcheck-am:
 
 maintainer-clean: maintainer-clean-am
-
+	-rm -rf ./$(DEPDIR)
+	-rm -f Makefile
 maintainer-clean-am: distclean-am maintainer-clean-generic
 
 mostlyclean: mostlyclean-am
@@ -483,19 +579,28 @@ mostlyclean: mostlyclean-am
 mostlyclean-am: mostlyclean-compile mostlyclean-generic \
 	mostlyclean-libtool
 
+pdf: pdf-am
+
+pdf-am:
+
+ps: ps-am
+
+ps-am:
+
 uninstall-am: uninstall-binPROGRAMS uninstall-info-am
 
-.PHONY: GTAGS all all-am all-local check check-TESTS check-am clean \
-	clean-binPROGRAMS clean-checkPROGRAMS clean-generic \
-	clean-libtool distclean distclean-compile distclean-depend \
+.PHONY: CTAGS GTAGS all all-am all-local check check-TESTS check-am \
+	clean clean-binPROGRAMS clean-checkPROGRAMS clean-generic \
+	clean-libtool ctags distclean distclean-compile \
 	distclean-generic distclean-libtool distclean-tags distdir dvi \
-	dvi-am info info-am install install-am install-binPROGRAMS \
-	install-data install-data-am install-exec install-exec-am \
-	install-info install-info-am install-man install-strip \
-	installcheck installcheck-am installdirs maintainer-clean \
-	maintainer-clean-generic mostlyclean mostlyclean-compile \
-	mostlyclean-generic mostlyclean-libtool tags uninstall \
-	uninstall-am uninstall-binPROGRAMS uninstall-info-am
+	dvi-am html html-am info info-am install install-am \
+	install-binPROGRAMS install-data install-data-am install-exec \
+	install-exec-am install-info install-info-am install-man \
+	install-strip installcheck installcheck-am installdirs \
+	maintainer-clean maintainer-clean-generic mostlyclean \
+	mostlyclean-compile mostlyclean-generic mostlyclean-libtool \
+	pdf pdf-am ps ps-am tags uninstall uninstall-am \
+	uninstall-binPROGRAMS uninstall-info-am
 
 
 # lib/progs/tests targets recurse into subdirectories. build-* targets
diff --git a/tools/h5jam/Makefile.in b/tools/h5jam/Makefile.in
index 1275446..9febf16 100644
--- a/tools/h5jam/Makefile.in
+++ b/tools/h5jam/Makefile.in
@@ -1,8 +1,8 @@
-# Makefile.in generated by automake 1.6.3 from Makefile.am.
+# Makefile.in generated by automake 1.9.5 from Makefile.am.
 # @configure_input@
 
-# Copyright 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002
-# Free Software Foundation, Inc.
+# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
+# 2003, 2004, 2005  Free Software Foundation, Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -13,93 +13,149 @@
 # PARTICULAR PURPOSE.
 
 @SET_MAKE@
-SHELL = @SHELL@
+
+SOURCES = getub.c h5jam.c h5jamgentest.c h5unjam.c tellub.c
 
 srcdir = @srcdir@
 top_srcdir = @top_srcdir@
 VPATH = @srcdir@
-prefix = @prefix@
-exec_prefix = @exec_prefix@
-
-bindir = @bindir@
-sbindir = @sbindir@
-libexecdir = @libexecdir@
-datadir = @datadir@
-sysconfdir = @sysconfdir@
-sharedstatedir = @sharedstatedir@
-localstatedir = @localstatedir@
-libdir = @libdir@
-infodir = @infodir@
-mandir = @mandir@
-oldincludedir = /usr/include
 pkgdatadir = $(datadir)/@PACKAGE@
 pkglibdir = $(libdir)/@PACKAGE@
 pkgincludedir = $(includedir)/@PACKAGE@
 top_builddir = ../..
-
 am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
 INSTALL = @INSTALL@
-INSTALL_PROGRAM = @INSTALL_PROGRAM@
-INSTALL_DATA = @INSTALL_DATA@
 install_sh_DATA = $(install_sh) -c -m 644
 install_sh_PROGRAM = $(install_sh) -c
 install_sh_SCRIPT = $(install_sh) -c
-INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_HEADER = $(INSTALL_DATA)
-transform = @program_transform_name@
+transform = $(program_transform_name)
 NORMAL_INSTALL = :
 PRE_INSTALL = :
 POST_INSTALL = :
 NORMAL_UNINSTALL = :
 PRE_UNINSTALL = :
 POST_UNINSTALL = :
-host_alias = @host_alias@
+build_triplet = @build@
 host_triplet = @host@
-
-EXEEXT = @EXEEXT@
-OBJEXT = @OBJEXT@
-PATH_SEPARATOR = @PATH_SEPARATOR@
-
-# Install directories that automake doesn't know about
-includedir = $(exec_prefix)/include
-
+DIST_COMMON = $(srcdir)/Makefile.am $(srcdir)/Makefile.in \
+	$(srcdir)/testh5jam.sh.in $(top_srcdir)/config/commence.am \
+	$(top_srcdir)/config/conclude.am
+bin_PROGRAMS = h5jam$(EXEEXT) h5unjam$(EXEEXT)
+check_PROGRAMS = tellub$(EXEEXT) h5jamgentest$(EXEEXT) getub$(EXEEXT)
+subdir = tools/h5jam
+ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
+am__aclocal_m4_deps = $(top_srcdir)/configure.in
+am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+	$(ACLOCAL_M4)
+mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
+CONFIG_HEADER = $(top_builddir)/src/H5config.h
+CONFIG_CLEAN_FILES = testh5jam.sh
+am__installdirs = "$(DESTDIR)$(bindir)"
+binPROGRAMS_INSTALL = $(INSTALL_PROGRAM)
+PROGRAMS = $(bin_PROGRAMS)
+getub_SOURCES = getub.c
+getub_OBJECTS = getub.$(OBJEXT)
+getub_LDADD = $(LDADD)
+am__DEPENDENCIES_1 = $(top_builddir)/tools/lib/libh5tools.la
+am__DEPENDENCIES_2 = $(top_builddir)/src/libhdf5.la
+getub_DEPENDENCIES = $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_2)
+h5jam_SOURCES = h5jam.c
+h5jam_OBJECTS = h5jam.$(OBJEXT)
+h5jam_LDADD = $(LDADD)
+h5jam_DEPENDENCIES = $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_2)
+h5jamgentest_SOURCES = h5jamgentest.c
+h5jamgentest_OBJECTS = h5jamgentest.$(OBJEXT)
+h5jamgentest_LDADD = $(LDADD)
+h5jamgentest_DEPENDENCIES = $(am__DEPENDENCIES_1) \
+	$(am__DEPENDENCIES_2)
+h5unjam_SOURCES = h5unjam.c
+h5unjam_OBJECTS = h5unjam.$(OBJEXT)
+h5unjam_LDADD = $(LDADD)
+h5unjam_DEPENDENCIES = $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_2)
+tellub_SOURCES = tellub.c
+tellub_OBJECTS = tellub.$(OBJEXT)
+tellub_LDADD = $(LDADD)
+tellub_DEPENDENCIES = $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_2)
+DEFAULT_INCLUDES = -I. -I$(srcdir) -I$(top_builddir)/src
+depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
+am__depfiles_maybe = depfiles
+COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
+	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
+LTCOMPILE = $(LIBTOOL) --tag=CC --mode=compile $(CC) $(DEFS) \
+	$(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
+	$(AM_CFLAGS) $(CFLAGS)
+CCLD = $(CC)
+LINK = $(LIBTOOL) --tag=CC --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
+	$(AM_LDFLAGS) $(LDFLAGS) -o $@
+SOURCES = getub.c h5jam.c h5jamgentest.c h5unjam.c tellub.c
+DIST_SOURCES = getub.c h5jam.c h5jamgentest.c h5unjam.c tellub.c
+ETAGS = etags
+CTAGS = ctags
+DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
 
 # Set the paths for autotools to be correct on heping.
 # Ideally, these tools should never be needed during the build.
 ACLOCAL = /usr/bin/aclocal
-AUTOCONF = /usr/local/autoconf-2.59/bin/autoconf
-AUTOMAKE = /usr/bin/automake
-AUTOHEADER = /usr/local/autoconf-2.59/bin/autoheader
 ADD_PARALLEL_FILES = @ADD_PARALLEL_FILES@
+AMDEP_FALSE = @AMDEP_FALSE@
+AMDEP_TRUE = @AMDEP_TRUE@
 AMTAR = @AMTAR@
 AM_MAKEFLAGS = @AM_MAKEFLAGS@
 AR = @AR@
-AS = @AS@
+AUTOCONF = /usr/local/autoconf-2.59/bin/autoconf
+AUTOHEADER = /usr/local/autoconf-2.59/bin/autoheader
+AUTOMAKE = /usr/bin/automake
 AWK = @AWK@
+BUILD_CXX_CONDITIONAL_FALSE = @BUILD_CXX_CONDITIONAL_FALSE@
+BUILD_CXX_CONDITIONAL_TRUE = @BUILD_CXX_CONDITIONAL_TRUE@
+BUILD_FORTRAN_CONDITIONAL_FALSE = @BUILD_FORTRAN_CONDITIONAL_FALSE@
+BUILD_FORTRAN_CONDITIONAL_TRUE = @BUILD_FORTRAN_CONDITIONAL_TRUE@
+BUILD_HDF5_HL_CONDITIONAL_FALSE = @BUILD_HDF5_HL_CONDITIONAL_FALSE@
+BUILD_HDF5_HL_CONDITIONAL_TRUE = @BUILD_HDF5_HL_CONDITIONAL_TRUE@
+BUILD_PABLO_CONDITIONAL_FALSE = @BUILD_PABLO_CONDITIONAL_FALSE@
+BUILD_PABLO_CONDITIONAL_TRUE = @BUILD_PABLO_CONDITIONAL_TRUE@
+BUILD_PARALLEL_CONDITIONAL_FALSE = @BUILD_PARALLEL_CONDITIONAL_FALSE@
+BUILD_PARALLEL_CONDITIONAL_TRUE = @BUILD_PARALLEL_CONDITIONAL_TRUE@
 BUILD_PDB2HDF = @BUILD_PDB2HDF@
+BUILD_PDB2HDF_CONDITIONAL_FALSE = @BUILD_PDB2HDF_CONDITIONAL_FALSE@
+BUILD_PDB2HDF_CONDITIONAL_TRUE = @BUILD_PDB2HDF_CONDITIONAL_TRUE@
 BYTESEX = @BYTESEX@
 CC = @CC@
+CCDEPMODE = @CCDEPMODE@
 CC_VERSION = @CC_VERSION@
+CFLAGS = @CFLAGS@
 CONFIG_DATE = @CONFIG_DATE@
 CONFIG_MODE = @CONFIG_MODE@
 CONFIG_USER = @CONFIG_USER@
+CPP = @CPP@
 CPPFLAGS = @CPPFLAGS@
 CXX = @CXX@
 CXXCPP = @CXXCPP@
+CXXDEPMODE = @CXXDEPMODE@
+CXXFLAGS = @CXXFLAGS@
+CYGPATH_W = @CYGPATH_W@
 DEBUG_PKG = @DEBUG_PKG@
+DEFS = @DEFS@
 DEPDIR = @DEPDIR@
-DLLTOOL = @DLLTOOL@
 DYNAMIC_DIRS = @DYNAMIC_DIRS@
 ECHO = @ECHO@
+ECHO_C = @ECHO_C@
+ECHO_N = @ECHO_N@
+ECHO_T = @ECHO_T@
 EGREP = @EGREP@
+EXEEXT = @EXEEXT@
 F77 = @F77@
+
+# Make sure that these variables are exported to the Makefiles
+F9XMODEXT = @F9XMODEXT@
+F9XMODFLAG = @F9XMODFLAG@
 F9XSUFFIXFLAG = @F9XSUFFIXFLAG@
 FC = @FC@
+FCFLAGS = @FCFLAGS@
 FFLAGS = @FFLAGS@
 FILTERS = @FILTERS@
 FSEARCH_DIRS = @FSEARCH_DIRS@
-GCJ = @GCJ@
-GCJFLAGS = @GCJFLAGS@
 H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
 HDF5_INTERFACES = @HDF5_INTERFACES@
@@ -109,21 +165,36 @@ HL_FOR = @HL_FOR@
 HSIZET = @HSIZET@
 HSIZE_T = @HSIZE_T@
 HSSIZE_T = @HSSIZE_T@
+INSTALL_DATA = @INSTALL_DATA@
+INSTALL_PROGRAM = @INSTALL_PROGRAM@
+INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
 INSTRUMENT_LIBRARY = @INSTRUMENT_LIBRARY@
+LDFLAGS = @LDFLAGS@
+LIBOBJS = @LIBOBJS@
+LIBS = @LIBS@
 LIBTOOL = @LIBTOOL@
 LN_S = @LN_S@
+LTLIBOBJS = @LTLIBOBJS@
 LT_STATIC_EXEC = @LT_STATIC_EXEC@
 MAINT = @MAINT@
+MAINTAINER_MODE_FALSE = @MAINTAINER_MODE_FALSE@
+MAINTAINER_MODE_TRUE = @MAINTAINER_MODE_TRUE@
+MAKEINFO = @MAKEINFO@
 MPE = @MPE@
-OBJDUMP = @OBJDUMP@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
+OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
+PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@
+PACKAGE_NAME = @PACKAGE_NAME@
+PACKAGE_STRING = @PACKAGE_STRING@
+PACKAGE_TARNAME = @PACKAGE_TARNAME@
+PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
+PATH_SEPARATOR = @PATH_SEPARATOR@
 PERL = @PERL@
 PTHREAD = @PTHREAD@
 RANLIB = @RANLIB@
-RC = @RC@
 ROOT = @ROOT@
 RUNPARALLEL = @RUNPARALLEL@
 RUNSERIAL = @RUNSERIAL@
@@ -131,6 +202,8 @@ R_INTEGER = @R_INTEGER@
 R_LARGE = @R_LARGE@
 SEARCH = @SEARCH@
 SETX = @SETX@
+SET_MAKE = @SET_MAKE@
+SHELL = @SHELL@
 SIZE_T = @SIZE_T@
 SRB = @SRB@
 STATIC_SHARED = @STATIC_SHARED@
@@ -145,9 +218,52 @@ USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@
 USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@
 USE_FILTER_SZIP = @USE_FILTER_SZIP@
 VERSION = @VERSION@
+ac_ct_AR = @ac_ct_AR@
+ac_ct_CC = @ac_ct_CC@
+ac_ct_CXX = @ac_ct_CXX@
+ac_ct_F77 = @ac_ct_F77@
+ac_ct_FC = @ac_ct_FC@
+ac_ct_RANLIB = @ac_ct_RANLIB@
+ac_ct_STRIP = @ac_ct_STRIP@
+am__fastdepCC_FALSE = @am__fastdepCC_FALSE@
+am__fastdepCC_TRUE = @am__fastdepCC_TRUE@
+am__fastdepCXX_FALSE = @am__fastdepCXX_FALSE@
+am__fastdepCXX_TRUE = @am__fastdepCXX_TRUE@
 am__include = @am__include@
+am__leading_dot = @am__leading_dot@
 am__quote = @am__quote@
+am__tar = @am__tar@
+am__untar = @am__untar@
+bindir = @bindir@
+build = @build@
+build_alias = @build_alias@
+build_cpu = @build_cpu@
+build_os = @build_os@
+build_vendor = @build_vendor@
+datadir = @datadir@
+exec_prefix = @exec_prefix@
+host = @host@
+host_alias = @host_alias@
+host_cpu = @host_cpu@
+host_os = @host_os@
+host_vendor = @host_vendor@
+
+# Install directories that automake doesn't know about
+includedir = $(exec_prefix)/include
+infodir = @infodir@
 install_sh = @install_sh@
+libdir = @libdir@
+libexecdir = @libexecdir@
+localstatedir = @localstatedir@
+mandir = @mandir@
+mkdir_p = @mkdir_p@
+oldincludedir = @oldincludedir@
+prefix = @prefix@
+program_transform_name = @program_transform_name@
+sbindir = @sbindir@
+sharedstatedir = @sharedstatedir@
+sysconfdir = @sysconfdir@
+target_alias = @target_alias@
 
 # Shell commands used in Makefiles
 RM = rm -f
@@ -170,10 +286,6 @@ H5CC_PP = $(bindir)/h5pcc
 H5FC = $(bindir)/h5fc
 H5FC_PP = $(bindir)/h5pfc
 
-# Make sure that these variables are exported to the Makefiles
-F9XMODEXT = @F9XMODEXT@
-F9XMODFLAG = @F9XMODFLAG@
-
 #
 # Copyright by the Board of Trustees of the University of Illinois.
 # All rights reserved.
@@ -192,16 +304,11 @@ F9XMODFLAG = @F9XMODFLAG@
 
 # Include src and tools/lib directories
 INCLUDES = -I$(top_srcdir)/src -I$(top_srcdir)/tools/lib
-
-bin_PROGRAMS = h5jam h5unjam
-check_PROGRAMS = tellub h5jamgentest getub
 TEST_SCRIPT = testh5jam.sh
-
 check_SCRIPTS = $(TEST_SCRIPT)
 
 # Link against the main HDF5 library and tools library
 LDADD = $(LIBH5TOOLS) $(LIBHDF5)
-
 MOSTLYCLEANFILES = *.h5 *.txt
 DISTCLEANFILES = testh5jam.sh
 
@@ -217,89 +324,52 @@ PROGS = $(bin_PROGRAMS) $(bin_SCRIPTS) $(noinst_PROGRAMS) $(noinst_SCRIPTS)   \
         $(EXTRA_PROG)
 
 TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST) 
-subdir = tools/h5jam
-mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
-CONFIG_HEADER = $(top_builddir)/src/H5config.h
-CONFIG_CLEAN_FILES = testh5jam.sh
-bin_PROGRAMS = h5jam$(EXEEXT) h5unjam$(EXEEXT)
-check_PROGRAMS = tellub$(EXEEXT) h5jamgentest$(EXEEXT) getub$(EXEEXT)
-PROGRAMS = $(bin_PROGRAMS)
-
-getub_SOURCES = getub.c
-getub_OBJECTS = getub.$(OBJEXT)
-getub_LDADD = $(LDADD)
-getub_DEPENDENCIES = $(top_builddir)/tools/lib/libh5tools.la \
-	$(top_builddir)/src/libhdf5.la
-getub_LDFLAGS =
-h5jam_SOURCES = h5jam.c
-h5jam_OBJECTS = h5jam.$(OBJEXT)
-h5jam_LDADD = $(LDADD)
-h5jam_DEPENDENCIES = $(top_builddir)/tools/lib/libh5tools.la \
-	$(top_builddir)/src/libhdf5.la
-h5jam_LDFLAGS =
-h5jamgentest_SOURCES = h5jamgentest.c
-h5jamgentest_OBJECTS = h5jamgentest.$(OBJEXT)
-h5jamgentest_LDADD = $(LDADD)
-h5jamgentest_DEPENDENCIES = $(top_builddir)/tools/lib/libh5tools.la \
-	$(top_builddir)/src/libhdf5.la
-h5jamgentest_LDFLAGS =
-h5unjam_SOURCES = h5unjam.c
-h5unjam_OBJECTS = h5unjam.$(OBJEXT)
-h5unjam_LDADD = $(LDADD)
-h5unjam_DEPENDENCIES = $(top_builddir)/tools/lib/libh5tools.la \
-	$(top_builddir)/src/libhdf5.la
-h5unjam_LDFLAGS =
-tellub_SOURCES = tellub.c
-tellub_OBJECTS = tellub.$(OBJEXT)
-tellub_LDADD = $(LDADD)
-tellub_DEPENDENCIES = $(top_builddir)/tools/lib/libh5tools.la \
-	$(top_builddir)/src/libhdf5.la
-tellub_LDFLAGS =
-
-DEFS = @DEFS@
-DEFAULT_INCLUDES =  -I. -I$(srcdir) -I$(top_builddir)/src
-LDFLAGS = @LDFLAGS@
-LIBS = @LIBS@
-depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
-am__depfiles_maybe = depfiles
-@AMDEP_TRUE@DEP_FILES = ./$(DEPDIR)/getub.Po ./$(DEPDIR)/h5jam.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/h5jamgentest.Po ./$(DEPDIR)/h5unjam.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/tellub.Po
-COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
-	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
-LTCOMPILE = $(LIBTOOL) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) \
-	$(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
-CCLD = $(CC)
-LINK = $(LIBTOOL) --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
-	$(AM_LDFLAGS) $(LDFLAGS) -o $@
-CFLAGS = @CFLAGS@
-DIST_SOURCES = getub.c h5jam.c h5jamgentest.c h5unjam.c tellub.c
-DIST_COMMON = Makefile.am Makefile.in testh5jam.sh.in
-SOURCES = getub.c h5jam.c h5jamgentest.c h5unjam.c tellub.c
-
 all: all-am
 
 .SUFFIXES:
 .SUFFIXES: .c .lo .o .obj
-$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(top_srcdir)/configure.in $(ACLOCAL_M4)
+$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(am__configure_deps)
+	@for dep in $?; do \
+	  case '$(am__configure_deps)' in \
+	    *$$dep*) \
+	      cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh \
+		&& exit 0; \
+	      exit 1;; \
+	  esac; \
+	done; \
+	echo ' cd $(top_srcdir) && $(AUTOMAKE) --foreign  tools/h5jam/Makefile'; \
 	cd $(top_srcdir) && \
 	  $(AUTOMAKE) --foreign  tools/h5jam/Makefile
-Makefile: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.in  $(top_builddir)/config.status
-	cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)
-testh5jam.sh: $(top_builddir)/config.status testh5jam.sh.in
+.PRECIOUS: Makefile
+Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+	@case '$?' in \
+	  *config.status*) \
+	    cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh;; \
+	  *) \
+	    echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)'; \
+	    cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe);; \
+	esac;
+
+$(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+
+$(top_srcdir)/configure: @MAINTAINER_MODE_TRUE@ $(am__configure_deps)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+$(ACLOCAL_M4): @MAINTAINER_MODE_TRUE@ $(am__aclocal_m4_deps)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+testh5jam.sh: $(top_builddir)/config.status $(srcdir)/testh5jam.sh.in
 	cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@
-binPROGRAMS_INSTALL = $(INSTALL_PROGRAM)
 install-binPROGRAMS: $(bin_PROGRAMS)
 	@$(NORMAL_INSTALL)
-	$(mkinstalldirs) $(DESTDIR)$(bindir)
+	test -z "$(bindir)" || $(mkdir_p) "$(DESTDIR)$(bindir)"
 	@list='$(bin_PROGRAMS)'; for p in $$list; do \
 	  p1=`echo $$p|sed 's/$(EXEEXT)$$//'`; \
 	  if test -f $$p \
 	     || test -f $$p1 \
 	  ; then \
 	    f=`echo "$$p1" | sed 's,^.*/,,;$(transform);s/$$/$(EXEEXT)/'`; \
-	   echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) $$p $(DESTDIR)$(bindir)/$$f"; \
-	   $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) $$p $(DESTDIR)$(bindir)/$$f; \
+	   echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) '$$p' '$(DESTDIR)$(bindir)/$$f'"; \
+	   $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) "$$p" "$(DESTDIR)$(bindir)/$$f" || exit 1; \
 	  else :; fi; \
 	done
 
@@ -307,8 +377,8 @@ uninstall-binPROGRAMS:
 	@$(NORMAL_UNINSTALL)
 	@list='$(bin_PROGRAMS)'; for p in $$list; do \
 	  f=`echo "$$p" | sed 's,^.*/,,;s/$(EXEEXT)$$//;$(transform);s/$$/$(EXEEXT)/'`; \
-	  echo " rm -f $(DESTDIR)$(bindir)/$$f"; \
-	  rm -f $(DESTDIR)$(bindir)/$$f; \
+	  echo " rm -f '$(DESTDIR)$(bindir)/$$f'"; \
+	  rm -f "$(DESTDIR)$(bindir)/$$f"; \
 	done
 
 clean-binPROGRAMS:
@@ -341,7 +411,7 @@ tellub$(EXEEXT): $(tellub_OBJECTS) $(tellub_DEPENDENCIES)
 	$(LINK) $(tellub_LDFLAGS) $(tellub_OBJECTS) $(tellub_LDADD) $(LIBS)
 
 mostlyclean-compile:
-	-rm -f *.$(OBJEXT) core *.core
+	-rm -f *.$(OBJEXT)
 
 distclean-compile:
 	-rm -f *.tab.c
@@ -352,27 +422,26 @@ distclean-compile:
 @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/h5unjam.Po@am__quote@
 @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/tellub.Po@am__quote@
 
-distclean-depend:
-	-rm -rf ./$(DEPDIR)
-
 .c.o:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Po' tmpdepfile='$(DEPDIR)/$*.TPo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(COMPILE) -c `test -f '$<' || echo '$(srcdir)/'`$<
+@am__fastdepCC_TRUE@	if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ $<; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(COMPILE) -c $<
 
 .c.obj:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Po' tmpdepfile='$(DEPDIR)/$*.TPo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(COMPILE) -c `cygpath -w $<`
+@am__fastdepCC_TRUE@	if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ `$(CYGPATH_W) '$<'`; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(COMPILE) -c `$(CYGPATH_W) '$<'`
 
 .c.lo:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Plo' tmpdepfile='$(DEPDIR)/$*.TPlo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(LTCOMPILE) -c -o $@ `test -f '$<' || echo '$(srcdir)/'`$<
-CCDEPMODE = @CCDEPMODE@
+@am__fastdepCC_TRUE@	if $(LTCOMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ $<; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Plo"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(LTCOMPILE) -c -o $@ $<
 
 mostlyclean-libtool:
 	-rm -f *.lo
@@ -384,11 +453,6 @@ distclean-libtool:
 	-rm -f libtool
 uninstall-info-am:
 
-ETAGS = etags
-ETAGSFLAGS =
-
-tags: TAGS
-
 ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
@@ -397,6 +461,7 @@ ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	  $(AWK) '    { files[$$0] = 1; } \
 	       END { for (i in files) print i; }'`; \
 	mkid -fID $$unique
+tags: TAGS
 
 TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
@@ -408,8 +473,24 @@ TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 	  done | \
 	  $(AWK) '    { files[$$0] = 1; } \
 	       END { for (i in files) print i; }'`; \
-	test -z "$(ETAGS_ARGS)$$tags$$unique" \
-	  || $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
+	  test -n "$$unique" || unique=$$empty_fix; \
+	  $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	    $$tags $$unique; \
+	fi
+ctags: CTAGS
+CTAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
+		$(TAGS_FILES) $(LISP)
+	tags=; \
+	here=`pwd`; \
+	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
+	unique=`for i in $$list; do \
+	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
+	  done | \
+	  $(AWK) '    { files[$$0] = 1; } \
+	       END { for (i in files) print i; }'`; \
+	test -z "$(CTAGS_ARGS)$$tags$$unique" \
+	  || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
 	     $$tags $$unique
 
 GTAGS:
@@ -418,19 +499,22 @@ GTAGS:
 	  && gtags -i $(GTAGS_ARGS) $$here
 
 distclean-tags:
-	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH
-DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
-
-top_distdir = ../..
-distdir = $(top_distdir)/$(PACKAGE)-$(VERSION)
+	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
 
 distdir: $(DISTFILES)
-	@list='$(DISTFILES)'; for file in $$list; do \
+	$(mkdir_p) $(distdir)/../../config
+	@srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`; \
+	topsrcdirstrip=`echo "$(top_srcdir)" | sed 's|.|.|g'`; \
+	list='$(DISTFILES)'; for file in $$list; do \
+	  case $$file in \
+	    $(srcdir)/*) file=`echo "$$file" | sed "s|^$$srcdirstrip/||"`;; \
+	    $(top_srcdir)/*) file=`echo "$$file" | sed "s|^$$topsrcdirstrip/|$(top_builddir)/|"`;; \
+	  esac; \
 	  if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
 	  dir=`echo "$$file" | sed -e 's,/[^/]*$$,,'`; \
 	  if test "$$dir" != "$$file" && test "$$dir" != "."; then \
 	    dir="/$$dir"; \
-	    $(mkinstalldirs) "$(distdir)$$dir"; \
+	    $(mkdir_p) "$(distdir)$$dir"; \
 	  else \
 	    dir=''; \
 	  fi; \
@@ -450,10 +534,10 @@ check-am: all-am
 	$(MAKE) $(AM_MAKEFLAGS) check-TESTS
 check: check-am
 all-am: Makefile $(PROGRAMS) all-local
-
 installdirs:
-	$(mkinstalldirs) $(DESTDIR)$(bindir)
-
+	for dir in "$(DESTDIR)$(bindir)"; do \
+	  test -z "$$dir" || $(mkdir_p) "$$dir"; \
+	done
 install: install-am
 install-exec: install-exec-am
 install-data: install-data-am
@@ -465,7 +549,7 @@ install-am: all-am
 installcheck: installcheck-am
 install-strip:
 	$(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
-	  INSTALL_STRIP_FLAG=-s \
+	  install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
 	  `test -z '$(STRIP)' || \
 	    echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install
 mostlyclean-generic:
@@ -474,7 +558,7 @@ mostlyclean-generic:
 clean-generic:
 
 distclean-generic:
-	-rm -f Makefile $(CONFIG_CLEAN_FILES)
+	-test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
 	-test -z "$(DISTCLEANFILES)" || rm -f $(DISTCLEANFILES)
 
 maintainer-clean-generic:
@@ -486,14 +570,17 @@ clean-am: clean-binPROGRAMS clean-checkPROGRAMS clean-generic \
 	clean-libtool mostlyclean-am
 
 distclean: distclean-am
-
-distclean-am: clean-am distclean-compile distclean-depend \
-	distclean-generic distclean-libtool distclean-tags
+	-rm -rf ./$(DEPDIR)
+	-rm -f Makefile
+distclean-am: clean-am distclean-compile distclean-generic \
+	distclean-libtool distclean-tags
 
 dvi: dvi-am
 
 dvi-am:
 
+html: html-am
+
 info: info-am
 
 info-am:
@@ -509,7 +596,8 @@ install-man:
 installcheck-am:
 
 maintainer-clean: maintainer-clean-am
-
+	-rm -rf ./$(DEPDIR)
+	-rm -f Makefile
 maintainer-clean-am: distclean-am maintainer-clean-generic
 
 mostlyclean: mostlyclean-am
@@ -517,19 +605,28 @@ mostlyclean: mostlyclean-am
 mostlyclean-am: mostlyclean-compile mostlyclean-generic \
 	mostlyclean-libtool
 
+pdf: pdf-am
+
+pdf-am:
+
+ps: ps-am
+
+ps-am:
+
 uninstall-am: uninstall-binPROGRAMS uninstall-info-am
 
-.PHONY: GTAGS all all-am all-local check check-TESTS check-am clean \
-	clean-binPROGRAMS clean-checkPROGRAMS clean-generic \
-	clean-libtool distclean distclean-compile distclean-depend \
+.PHONY: CTAGS GTAGS all all-am all-local check check-TESTS check-am \
+	clean clean-binPROGRAMS clean-checkPROGRAMS clean-generic \
+	clean-libtool ctags distclean distclean-compile \
 	distclean-generic distclean-libtool distclean-tags distdir dvi \
-	dvi-am info info-am install install-am install-binPROGRAMS \
-	install-data install-data-am install-exec install-exec-am \
-	install-info install-info-am install-man install-strip \
-	installcheck installcheck-am installdirs maintainer-clean \
-	maintainer-clean-generic mostlyclean mostlyclean-compile \
-	mostlyclean-generic mostlyclean-libtool tags uninstall \
-	uninstall-am uninstall-binPROGRAMS uninstall-info-am
+	dvi-am html html-am info info-am install install-am \
+	install-binPROGRAMS install-data install-data-am install-exec \
+	install-exec-am install-info install-info-am install-man \
+	install-strip installcheck installcheck-am installdirs \
+	maintainer-clean maintainer-clean-generic mostlyclean \
+	mostlyclean-compile mostlyclean-generic mostlyclean-libtool \
+	pdf pdf-am ps ps-am tags uninstall uninstall-am \
+	uninstall-binPROGRAMS uninstall-info-am
 
 
 # lib/progs/tests targets recurse into subdirectories. build-* targets
diff --git a/tools/h5ls/Makefile.in b/tools/h5ls/Makefile.in
index a4f8e4c..aea993a 100644
--- a/tools/h5ls/Makefile.in
+++ b/tools/h5ls/Makefile.in
@@ -1,8 +1,8 @@
-# Makefile.in generated by automake 1.6.3 from Makefile.am.
+# Makefile.in generated by automake 1.9.5 from Makefile.am.
 # @configure_input@
 
-# Copyright 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002
-# Free Software Foundation, Inc.
+# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
+# 2003, 2004, 2005  Free Software Foundation, Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -29,93 +29,131 @@
 #
 # HDF5 Library Makefile(.in)
 #
-SHELL = @SHELL@
+
+SOURCES = h5ls.c
 
 srcdir = @srcdir@
 top_srcdir = @top_srcdir@
 VPATH = @srcdir@
-prefix = @prefix@
-exec_prefix = @exec_prefix@
-
-bindir = @bindir@
-sbindir = @sbindir@
-libexecdir = @libexecdir@
-datadir = @datadir@
-sysconfdir = @sysconfdir@
-sharedstatedir = @sharedstatedir@
-localstatedir = @localstatedir@
-libdir = @libdir@
-infodir = @infodir@
-mandir = @mandir@
-oldincludedir = /usr/include
 pkgdatadir = $(datadir)/@PACKAGE@
 pkglibdir = $(libdir)/@PACKAGE@
 pkgincludedir = $(includedir)/@PACKAGE@
 top_builddir = ../..
-
 am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
 INSTALL = @INSTALL@
-INSTALL_PROGRAM = @INSTALL_PROGRAM@
-INSTALL_DATA = @INSTALL_DATA@
 install_sh_DATA = $(install_sh) -c -m 644
 install_sh_PROGRAM = $(install_sh) -c
 install_sh_SCRIPT = $(install_sh) -c
-INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_HEADER = $(INSTALL_DATA)
-transform = @program_transform_name@
+transform = $(program_transform_name)
 NORMAL_INSTALL = :
 PRE_INSTALL = :
 POST_INSTALL = :
 NORMAL_UNINSTALL = :
 PRE_UNINSTALL = :
 POST_UNINSTALL = :
-host_alias = @host_alias@
+build_triplet = @build@
 host_triplet = @host@
-
-EXEEXT = @EXEEXT@
-OBJEXT = @OBJEXT@
-PATH_SEPARATOR = @PATH_SEPARATOR@
-
-# Install directories that automake doesn't know about
-includedir = $(exec_prefix)/include
-
+DIST_COMMON = $(srcdir)/Makefile.am $(srcdir)/Makefile.in \
+	$(top_srcdir)/config/commence.am \
+	$(top_srcdir)/config/conclude.am
+bin_PROGRAMS = h5ls$(EXEEXT)
+subdir = tools/h5ls
+ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
+am__aclocal_m4_deps = $(top_srcdir)/configure.in
+am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+	$(ACLOCAL_M4)
+mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
+CONFIG_HEADER = $(top_builddir)/src/H5config.h
+CONFIG_CLEAN_FILES =
+am__installdirs = "$(DESTDIR)$(bindir)"
+binPROGRAMS_INSTALL = $(INSTALL_PROGRAM)
+PROGRAMS = $(bin_PROGRAMS)
+h5ls_SOURCES = h5ls.c
+h5ls_OBJECTS = h5ls.$(OBJEXT)
+h5ls_LDADD = $(LDADD)
+am__DEPENDENCIES_1 = $(top_builddir)/tools/lib/libh5tools.la
+am__DEPENDENCIES_2 = $(top_builddir)/src/libhdf5.la
+h5ls_DEPENDENCIES = $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_2)
+DEFAULT_INCLUDES = -I. -I$(srcdir) -I$(top_builddir)/src
+depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
+am__depfiles_maybe = depfiles
+COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
+	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
+LTCOMPILE = $(LIBTOOL) --tag=CC --mode=compile $(CC) $(DEFS) \
+	$(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
+	$(AM_CFLAGS) $(CFLAGS)
+CCLD = $(CC)
+LINK = $(LIBTOOL) --tag=CC --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
+	$(AM_LDFLAGS) $(LDFLAGS) -o $@
+SOURCES = h5ls.c
+DIST_SOURCES = h5ls.c
+ETAGS = etags
+CTAGS = ctags
+DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
 
 # Set the paths for autotools to be correct on heping.
 # Ideally, these tools should never be needed during the build.
 ACLOCAL = /usr/bin/aclocal
-AUTOCONF = /usr/local/autoconf-2.59/bin/autoconf
-AUTOMAKE = /usr/bin/automake
-AUTOHEADER = /usr/local/autoconf-2.59/bin/autoheader
 ADD_PARALLEL_FILES = @ADD_PARALLEL_FILES@
+AMDEP_FALSE = @AMDEP_FALSE@
+AMDEP_TRUE = @AMDEP_TRUE@
 AMTAR = @AMTAR@
 AM_MAKEFLAGS = @AM_MAKEFLAGS@
 AR = @AR@
-AS = @AS@
+AUTOCONF = /usr/local/autoconf-2.59/bin/autoconf
+AUTOHEADER = /usr/local/autoconf-2.59/bin/autoheader
+AUTOMAKE = /usr/bin/automake
 AWK = @AWK@
+BUILD_CXX_CONDITIONAL_FALSE = @BUILD_CXX_CONDITIONAL_FALSE@
+BUILD_CXX_CONDITIONAL_TRUE = @BUILD_CXX_CONDITIONAL_TRUE@
+BUILD_FORTRAN_CONDITIONAL_FALSE = @BUILD_FORTRAN_CONDITIONAL_FALSE@
+BUILD_FORTRAN_CONDITIONAL_TRUE = @BUILD_FORTRAN_CONDITIONAL_TRUE@
+BUILD_HDF5_HL_CONDITIONAL_FALSE = @BUILD_HDF5_HL_CONDITIONAL_FALSE@
+BUILD_HDF5_HL_CONDITIONAL_TRUE = @BUILD_HDF5_HL_CONDITIONAL_TRUE@
+BUILD_PABLO_CONDITIONAL_FALSE = @BUILD_PABLO_CONDITIONAL_FALSE@
+BUILD_PABLO_CONDITIONAL_TRUE = @BUILD_PABLO_CONDITIONAL_TRUE@
+BUILD_PARALLEL_CONDITIONAL_FALSE = @BUILD_PARALLEL_CONDITIONAL_FALSE@
+BUILD_PARALLEL_CONDITIONAL_TRUE = @BUILD_PARALLEL_CONDITIONAL_TRUE@
 BUILD_PDB2HDF = @BUILD_PDB2HDF@
+BUILD_PDB2HDF_CONDITIONAL_FALSE = @BUILD_PDB2HDF_CONDITIONAL_FALSE@
+BUILD_PDB2HDF_CONDITIONAL_TRUE = @BUILD_PDB2HDF_CONDITIONAL_TRUE@
 BYTESEX = @BYTESEX@
 CC = @CC@
+CCDEPMODE = @CCDEPMODE@
 CC_VERSION = @CC_VERSION@
+CFLAGS = @CFLAGS@
 CONFIG_DATE = @CONFIG_DATE@
 CONFIG_MODE = @CONFIG_MODE@
 CONFIG_USER = @CONFIG_USER@
+CPP = @CPP@
 CPPFLAGS = @CPPFLAGS@
 CXX = @CXX@
 CXXCPP = @CXXCPP@
+CXXDEPMODE = @CXXDEPMODE@
+CXXFLAGS = @CXXFLAGS@
+CYGPATH_W = @CYGPATH_W@
 DEBUG_PKG = @DEBUG_PKG@
+DEFS = @DEFS@
 DEPDIR = @DEPDIR@
-DLLTOOL = @DLLTOOL@
 DYNAMIC_DIRS = @DYNAMIC_DIRS@
 ECHO = @ECHO@
+ECHO_C = @ECHO_C@
+ECHO_N = @ECHO_N@
+ECHO_T = @ECHO_T@
 EGREP = @EGREP@
+EXEEXT = @EXEEXT@
 F77 = @F77@
+
+# Make sure that these variables are exported to the Makefiles
+F9XMODEXT = @F9XMODEXT@
+F9XMODFLAG = @F9XMODFLAG@
 F9XSUFFIXFLAG = @F9XSUFFIXFLAG@
 FC = @FC@
+FCFLAGS = @FCFLAGS@
 FFLAGS = @FFLAGS@
 FILTERS = @FILTERS@
 FSEARCH_DIRS = @FSEARCH_DIRS@
-GCJ = @GCJ@
-GCJFLAGS = @GCJFLAGS@
 H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
 HDF5_INTERFACES = @HDF5_INTERFACES@
@@ -125,21 +163,36 @@ HL_FOR = @HL_FOR@
 HSIZET = @HSIZET@
 HSIZE_T = @HSIZE_T@
 HSSIZE_T = @HSSIZE_T@
+INSTALL_DATA = @INSTALL_DATA@
+INSTALL_PROGRAM = @INSTALL_PROGRAM@
+INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
 INSTRUMENT_LIBRARY = @INSTRUMENT_LIBRARY@
+LDFLAGS = @LDFLAGS@
+LIBOBJS = @LIBOBJS@
+LIBS = @LIBS@
 LIBTOOL = @LIBTOOL@
 LN_S = @LN_S@
+LTLIBOBJS = @LTLIBOBJS@
 LT_STATIC_EXEC = @LT_STATIC_EXEC@
 MAINT = @MAINT@
+MAINTAINER_MODE_FALSE = @MAINTAINER_MODE_FALSE@
+MAINTAINER_MODE_TRUE = @MAINTAINER_MODE_TRUE@
+MAKEINFO = @MAKEINFO@
 MPE = @MPE@
-OBJDUMP = @OBJDUMP@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
+OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
+PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@
+PACKAGE_NAME = @PACKAGE_NAME@
+PACKAGE_STRING = @PACKAGE_STRING@
+PACKAGE_TARNAME = @PACKAGE_TARNAME@
+PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
+PATH_SEPARATOR = @PATH_SEPARATOR@
 PERL = @PERL@
 PTHREAD = @PTHREAD@
 RANLIB = @RANLIB@
-RC = @RC@
 ROOT = @ROOT@
 RUNPARALLEL = @RUNPARALLEL@
 RUNSERIAL = @RUNSERIAL@
@@ -147,6 +200,8 @@ R_INTEGER = @R_INTEGER@
 R_LARGE = @R_LARGE@
 SEARCH = @SEARCH@
 SETX = @SETX@
+SET_MAKE = @SET_MAKE@
+SHELL = @SHELL@
 SIZE_T = @SIZE_T@
 SRB = @SRB@
 STATIC_SHARED = @STATIC_SHARED@
@@ -161,9 +216,52 @@ USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@
 USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@
 USE_FILTER_SZIP = @USE_FILTER_SZIP@
 VERSION = @VERSION@
+ac_ct_AR = @ac_ct_AR@
+ac_ct_CC = @ac_ct_CC@
+ac_ct_CXX = @ac_ct_CXX@
+ac_ct_F77 = @ac_ct_F77@
+ac_ct_FC = @ac_ct_FC@
+ac_ct_RANLIB = @ac_ct_RANLIB@
+ac_ct_STRIP = @ac_ct_STRIP@
+am__fastdepCC_FALSE = @am__fastdepCC_FALSE@
+am__fastdepCC_TRUE = @am__fastdepCC_TRUE@
+am__fastdepCXX_FALSE = @am__fastdepCXX_FALSE@
+am__fastdepCXX_TRUE = @am__fastdepCXX_TRUE@
 am__include = @am__include@
+am__leading_dot = @am__leading_dot@
 am__quote = @am__quote@
+am__tar = @am__tar@
+am__untar = @am__untar@
+bindir = @bindir@
+build = @build@
+build_alias = @build_alias@
+build_cpu = @build_cpu@
+build_os = @build_os@
+build_vendor = @build_vendor@
+datadir = @datadir@
+exec_prefix = @exec_prefix@
+host = @host@
+host_alias = @host_alias@
+host_cpu = @host_cpu@
+host_os = @host_os@
+host_vendor = @host_vendor@
+
+# Install directories that automake doesn't know about
+includedir = $(exec_prefix)/include
+infodir = @infodir@
 install_sh = @install_sh@
+libdir = @libdir@
+libexecdir = @libexecdir@
+localstatedir = @localstatedir@
+mandir = @mandir@
+mkdir_p = @mkdir_p@
+oldincludedir = @oldincludedir@
+prefix = @prefix@
+program_transform_name = @program_transform_name@
+sbindir = @sbindir@
+sharedstatedir = @sharedstatedir@
+sysconfdir = @sysconfdir@
+target_alias = @target_alias@
 
 # Shell commands used in Makefiles
 RM = rm -f
@@ -186,10 +284,6 @@ H5CC_PP = $(bindir)/h5pcc
 H5FC = $(bindir)/h5fc
 H5FC_PP = $(bindir)/h5pfc
 
-# Make sure that these variables are exported to the Makefiles
-F9XMODEXT = @F9XMODEXT@
-F9XMODFLAG = @F9XMODFLAG@
-
 # Include src and tools/lib directories
 INCLUDES = -I$(top_srcdir)/src -I$(top_srcdir)/tools/lib
 
@@ -197,9 +291,6 @@ INCLUDES = -I$(top_srcdir)/src -I$(top_srcdir)/tools/lib
 TEST_SCRIPT = $(srcdir)/testh5ls.sh
 check_SCRIPTS = $(TEST_SCRIPT)
 
-# This is our main target, the h5ls tool
-bin_PROGRAMS = h5ls
-
 # All programs depend on the hdf5 and h5tools libraries
 LDADD = $(LIBH5TOOLS) $(LIBHDF5)
 
@@ -215,60 +306,50 @@ PROGS = $(bin_PROGRAMS) $(bin_SCRIPTS) $(noinst_PROGRAMS) $(noinst_SCRIPTS)   \
         $(EXTRA_PROG)
 
 TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST) 
-subdir = tools/h5ls
-mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
-CONFIG_HEADER = $(top_builddir)/src/H5config.h
-CONFIG_CLEAN_FILES =
-bin_PROGRAMS = h5ls$(EXEEXT)
-PROGRAMS = $(bin_PROGRAMS)
-
-h5ls_SOURCES = h5ls.c
-h5ls_OBJECTS = h5ls.$(OBJEXT)
-h5ls_LDADD = $(LDADD)
-h5ls_DEPENDENCIES = $(top_builddir)/tools/lib/libh5tools.la \
-	$(top_builddir)/src/libhdf5.la
-h5ls_LDFLAGS =
-
-DEFS = @DEFS@
-DEFAULT_INCLUDES =  -I. -I$(srcdir) -I$(top_builddir)/src
-LDFLAGS = @LDFLAGS@
-LIBS = @LIBS@
-depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
-am__depfiles_maybe = depfiles
-@AMDEP_TRUE@DEP_FILES = ./$(DEPDIR)/h5ls.Po
-COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
-	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
-LTCOMPILE = $(LIBTOOL) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) \
-	$(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
-CCLD = $(CC)
-LINK = $(LIBTOOL) --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
-	$(AM_LDFLAGS) $(LDFLAGS) -o $@
-CFLAGS = @CFLAGS@
-DIST_SOURCES = h5ls.c
-DIST_COMMON = Makefile.am Makefile.in
-SOURCES = h5ls.c
-
 all: all-am
 
 .SUFFIXES:
 .SUFFIXES: .c .lo .o .obj
-$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(top_srcdir)/configure.in $(ACLOCAL_M4)
+$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(am__configure_deps)
+	@for dep in $?; do \
+	  case '$(am__configure_deps)' in \
+	    *$$dep*) \
+	      cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh \
+		&& exit 0; \
+	      exit 1;; \
+	  esac; \
+	done; \
+	echo ' cd $(top_srcdir) && $(AUTOMAKE) --foreign  tools/h5ls/Makefile'; \
 	cd $(top_srcdir) && \
 	  $(AUTOMAKE) --foreign  tools/h5ls/Makefile
-Makefile: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.in  $(top_builddir)/config.status
-	cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)
-binPROGRAMS_INSTALL = $(INSTALL_PROGRAM)
+.PRECIOUS: Makefile
+Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+	@case '$?' in \
+	  *config.status*) \
+	    cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh;; \
+	  *) \
+	    echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)'; \
+	    cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe);; \
+	esac;
+
+$(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+
+$(top_srcdir)/configure: @MAINTAINER_MODE_TRUE@ $(am__configure_deps)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+$(ACLOCAL_M4): @MAINTAINER_MODE_TRUE@ $(am__aclocal_m4_deps)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
 install-binPROGRAMS: $(bin_PROGRAMS)
 	@$(NORMAL_INSTALL)
-	$(mkinstalldirs) $(DESTDIR)$(bindir)
+	test -z "$(bindir)" || $(mkdir_p) "$(DESTDIR)$(bindir)"
 	@list='$(bin_PROGRAMS)'; for p in $$list; do \
 	  p1=`echo $$p|sed 's/$(EXEEXT)$$//'`; \
 	  if test -f $$p \
 	     || test -f $$p1 \
 	  ; then \
 	    f=`echo "$$p1" | sed 's,^.*/,,;$(transform);s/$$/$(EXEEXT)/'`; \
-	   echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) $$p $(DESTDIR)$(bindir)/$$f"; \
-	   $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) $$p $(DESTDIR)$(bindir)/$$f; \
+	   echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) '$$p' '$(DESTDIR)$(bindir)/$$f'"; \
+	   $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) "$$p" "$(DESTDIR)$(bindir)/$$f" || exit 1; \
 	  else :; fi; \
 	done
 
@@ -276,8 +357,8 @@ uninstall-binPROGRAMS:
 	@$(NORMAL_UNINSTALL)
 	@list='$(bin_PROGRAMS)'; for p in $$list; do \
 	  f=`echo "$$p" | sed 's,^.*/,,;s/$(EXEEXT)$$//;$(transform);s/$$/$(EXEEXT)/'`; \
-	  echo " rm -f $(DESTDIR)$(bindir)/$$f"; \
-	  rm -f $(DESTDIR)$(bindir)/$$f; \
+	  echo " rm -f '$(DESTDIR)$(bindir)/$$f'"; \
+	  rm -f "$(DESTDIR)$(bindir)/$$f"; \
 	done
 
 clean-binPROGRAMS:
@@ -291,34 +372,33 @@ h5ls$(EXEEXT): $(h5ls_OBJECTS) $(h5ls_DEPENDENCIES)
 	$(LINK) $(h5ls_LDFLAGS) $(h5ls_OBJECTS) $(h5ls_LDADD) $(LIBS)
 
 mostlyclean-compile:
-	-rm -f *.$(OBJEXT) core *.core
+	-rm -f *.$(OBJEXT)
 
 distclean-compile:
 	-rm -f *.tab.c
 
 @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/h5ls.Po@am__quote@
 
-distclean-depend:
-	-rm -rf ./$(DEPDIR)
-
 .c.o:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Po' tmpdepfile='$(DEPDIR)/$*.TPo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(COMPILE) -c `test -f '$<' || echo '$(srcdir)/'`$<
+@am__fastdepCC_TRUE@	if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ $<; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(COMPILE) -c $<
 
 .c.obj:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Po' tmpdepfile='$(DEPDIR)/$*.TPo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(COMPILE) -c `cygpath -w $<`
+@am__fastdepCC_TRUE@	if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ `$(CYGPATH_W) '$<'`; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(COMPILE) -c `$(CYGPATH_W) '$<'`
 
 .c.lo:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Plo' tmpdepfile='$(DEPDIR)/$*.TPlo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(LTCOMPILE) -c -o $@ `test -f '$<' || echo '$(srcdir)/'`$<
-CCDEPMODE = @CCDEPMODE@
+@am__fastdepCC_TRUE@	if $(LTCOMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ $<; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Plo"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(LTCOMPILE) -c -o $@ $<
 
 mostlyclean-libtool:
 	-rm -f *.lo
@@ -330,11 +410,6 @@ distclean-libtool:
 	-rm -f libtool
 uninstall-info-am:
 
-ETAGS = etags
-ETAGSFLAGS =
-
-tags: TAGS
-
 ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
@@ -343,6 +418,7 @@ ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	  $(AWK) '    { files[$$0] = 1; } \
 	       END { for (i in files) print i; }'`; \
 	mkid -fID $$unique
+tags: TAGS
 
 TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
@@ -354,8 +430,24 @@ TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 	  done | \
 	  $(AWK) '    { files[$$0] = 1; } \
 	       END { for (i in files) print i; }'`; \
-	test -z "$(ETAGS_ARGS)$$tags$$unique" \
-	  || $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
+	  test -n "$$unique" || unique=$$empty_fix; \
+	  $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	    $$tags $$unique; \
+	fi
+ctags: CTAGS
+CTAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
+		$(TAGS_FILES) $(LISP)
+	tags=; \
+	here=`pwd`; \
+	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
+	unique=`for i in $$list; do \
+	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
+	  done | \
+	  $(AWK) '    { files[$$0] = 1; } \
+	       END { for (i in files) print i; }'`; \
+	test -z "$(CTAGS_ARGS)$$tags$$unique" \
+	  || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
 	     $$tags $$unique
 
 GTAGS:
@@ -364,19 +456,22 @@ GTAGS:
 	  && gtags -i $(GTAGS_ARGS) $$here
 
 distclean-tags:
-	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH
-DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
-
-top_distdir = ../..
-distdir = $(top_distdir)/$(PACKAGE)-$(VERSION)
+	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
 
 distdir: $(DISTFILES)
-	@list='$(DISTFILES)'; for file in $$list; do \
+	$(mkdir_p) $(distdir)/../../config
+	@srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`; \
+	topsrcdirstrip=`echo "$(top_srcdir)" | sed 's|.|.|g'`; \
+	list='$(DISTFILES)'; for file in $$list; do \
+	  case $$file in \
+	    $(srcdir)/*) file=`echo "$$file" | sed "s|^$$srcdirstrip/||"`;; \
+	    $(top_srcdir)/*) file=`echo "$$file" | sed "s|^$$topsrcdirstrip/|$(top_builddir)/|"`;; \
+	  esac; \
 	  if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
 	  dir=`echo "$$file" | sed -e 's,/[^/]*$$,,'`; \
 	  if test "$$dir" != "$$file" && test "$$dir" != "."; then \
 	    dir="/$$dir"; \
-	    $(mkinstalldirs) "$(distdir)$$dir"; \
+	    $(mkdir_p) "$(distdir)$$dir"; \
 	  else \
 	    dir=''; \
 	  fi; \
@@ -396,10 +491,10 @@ check-am: all-am
 	$(MAKE) $(AM_MAKEFLAGS) check-TESTS
 check: check-am
 all-am: Makefile $(PROGRAMS) all-local
-
 installdirs:
-	$(mkinstalldirs) $(DESTDIR)$(bindir)
-
+	for dir in "$(DESTDIR)$(bindir)"; do \
+	  test -z "$$dir" || $(mkdir_p) "$$dir"; \
+	done
 install: install-am
 install-exec: install-exec-am
 install-data: install-data-am
@@ -411,7 +506,7 @@ install-am: all-am
 installcheck: installcheck-am
 install-strip:
 	$(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
-	  INSTALL_STRIP_FLAG=-s \
+	  install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
 	  `test -z '$(STRIP)' || \
 	    echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install
 mostlyclean-generic:
@@ -419,7 +514,7 @@ mostlyclean-generic:
 clean-generic:
 
 distclean-generic:
-	-rm -f Makefile $(CONFIG_CLEAN_FILES)
+	-test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
 
 maintainer-clean-generic:
 	@echo "This command is intended for maintainers to use"
@@ -429,14 +524,17 @@ clean: clean-am
 clean-am: clean-binPROGRAMS clean-generic clean-libtool mostlyclean-am
 
 distclean: distclean-am
-
-distclean-am: clean-am distclean-compile distclean-depend \
-	distclean-generic distclean-libtool distclean-tags
+	-rm -rf ./$(DEPDIR)
+	-rm -f Makefile
+distclean-am: clean-am distclean-compile distclean-generic \
+	distclean-libtool distclean-tags
 
 dvi: dvi-am
 
 dvi-am:
 
+html: html-am
+
 info: info-am
 
 info-am:
@@ -452,7 +550,8 @@ install-man:
 installcheck-am:
 
 maintainer-clean: maintainer-clean-am
-
+	-rm -rf ./$(DEPDIR)
+	-rm -f Makefile
 maintainer-clean-am: distclean-am maintainer-clean-generic
 
 mostlyclean: mostlyclean-am
@@ -460,19 +559,28 @@ mostlyclean: mostlyclean-am
 mostlyclean-am: mostlyclean-compile mostlyclean-generic \
 	mostlyclean-libtool
 
+pdf: pdf-am
+
+pdf-am:
+
+ps: ps-am
+
+ps-am:
+
 uninstall-am: uninstall-binPROGRAMS uninstall-info-am
 
-.PHONY: GTAGS all all-am all-local check check-TESTS check-am clean \
-	clean-binPROGRAMS clean-generic clean-libtool distclean \
-	distclean-compile distclean-depend distclean-generic \
-	distclean-libtool distclean-tags distdir dvi dvi-am info \
-	info-am install install-am install-binPROGRAMS install-data \
-	install-data-am install-exec install-exec-am install-info \
-	install-info-am install-man install-strip installcheck \
-	installcheck-am installdirs maintainer-clean \
+.PHONY: CTAGS GTAGS all all-am all-local check check-TESTS check-am \
+	clean clean-binPROGRAMS clean-generic clean-libtool ctags \
+	distclean distclean-compile distclean-generic \
+	distclean-libtool distclean-tags distdir dvi dvi-am html \
+	html-am info info-am install install-am install-binPROGRAMS \
+	install-data install-data-am install-exec install-exec-am \
+	install-info install-info-am install-man install-strip \
+	installcheck installcheck-am installdirs maintainer-clean \
 	maintainer-clean-generic mostlyclean mostlyclean-compile \
-	mostlyclean-generic mostlyclean-libtool tags uninstall \
-	uninstall-am uninstall-binPROGRAMS uninstall-info-am
+	mostlyclean-generic mostlyclean-libtool pdf pdf-am ps ps-am \
+	tags uninstall uninstall-am uninstall-binPROGRAMS \
+	uninstall-info-am
 
 
 # lib/progs/tests targets recurse into subdirectories. build-* targets
diff --git a/tools/h5repack/Makefile.in b/tools/h5repack/Makefile.in
index 32c7a97..ddce188 100644
--- a/tools/h5repack/Makefile.in
+++ b/tools/h5repack/Makefile.in
@@ -1,8 +1,8 @@
-# Makefile.in generated by automake 1.6.3 from Makefile.am.
+# Makefile.in generated by automake 1.9.5 from Makefile.am.
 # @configure_input@
 
-# Copyright 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002
-# Free Software Foundation, Inc.
+# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
+# 2003, 2004, 2005  Free Software Foundation, Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -29,93 +29,153 @@
 #
 # HDF5 Library Makefile(.in)
 #
-SHELL = @SHELL@
+
+SOURCES = $(h5repack_SOURCES) $(h5repacktst_SOURCES) $(testh5repack_detect_szip_SOURCES)
 
 srcdir = @srcdir@
 top_srcdir = @top_srcdir@
 VPATH = @srcdir@
-prefix = @prefix@
-exec_prefix = @exec_prefix@
-
-bindir = @bindir@
-sbindir = @sbindir@
-libexecdir = @libexecdir@
-datadir = @datadir@
-sysconfdir = @sysconfdir@
-sharedstatedir = @sharedstatedir@
-localstatedir = @localstatedir@
-libdir = @libdir@
-infodir = @infodir@
-mandir = @mandir@
-oldincludedir = /usr/include
 pkgdatadir = $(datadir)/@PACKAGE@
 pkglibdir = $(libdir)/@PACKAGE@
 pkgincludedir = $(includedir)/@PACKAGE@
 top_builddir = ../..
-
 am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
 INSTALL = @INSTALL@
-INSTALL_PROGRAM = @INSTALL_PROGRAM@
-INSTALL_DATA = @INSTALL_DATA@
 install_sh_DATA = $(install_sh) -c -m 644
 install_sh_PROGRAM = $(install_sh) -c
 install_sh_SCRIPT = $(install_sh) -c
-INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_HEADER = $(INSTALL_DATA)
-transform = @program_transform_name@
+transform = $(program_transform_name)
 NORMAL_INSTALL = :
 PRE_INSTALL = :
 POST_INSTALL = :
 NORMAL_UNINSTALL = :
 PRE_UNINSTALL = :
 POST_UNINSTALL = :
-host_alias = @host_alias@
+build_triplet = @build@
 host_triplet = @host@
-
-EXEEXT = @EXEEXT@
-OBJEXT = @OBJEXT@
-PATH_SEPARATOR = @PATH_SEPARATOR@
-
-# Install directories that automake doesn't know about
-includedir = $(exec_prefix)/include
-
+DIST_COMMON = $(srcdir)/Makefile.am $(srcdir)/Makefile.in \
+	$(srcdir)/h5repack.sh.in $(top_srcdir)/config/commence.am \
+	$(top_srcdir)/config/conclude.am
+noinst_PROGRAMS = testh5repack_detect_szip$(EXEEXT)
+check_PROGRAMS = $(am__EXEEXT_1)
+bin_PROGRAMS = h5repack$(EXEEXT)
+subdir = tools/h5repack
+ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
+am__aclocal_m4_deps = $(top_srcdir)/configure.in
+am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+	$(ACLOCAL_M4)
+mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
+CONFIG_HEADER = $(top_builddir)/src/H5config.h
+CONFIG_CLEAN_FILES = h5repack.sh
+am__installdirs = "$(DESTDIR)$(bindir)"
+binPROGRAMS_INSTALL = $(INSTALL_PROGRAM)
+am__EXEEXT_1 = h5repacktst$(EXEEXT)
+PROGRAMS = $(bin_PROGRAMS) $(noinst_PROGRAMS)
+am__objects_1 = h5repack.$(OBJEXT) h5repack_copy.$(OBJEXT) \
+	h5repack_filters.$(OBJEXT) h5repack_list.$(OBJEXT) \
+	h5repack_opttable.$(OBJEXT) h5repack_parse.$(OBJEXT) \
+	h5repack_refs.$(OBJEXT) h5repack_verify.$(OBJEXT)
+am_h5repack_OBJECTS = $(am__objects_1) h5repack_main.$(OBJEXT)
+h5repack_OBJECTS = $(am_h5repack_OBJECTS)
+h5repack_LDADD = $(LDADD)
+am__DEPENDENCIES_1 = $(top_builddir)/tools/lib/libh5tools.la
+am__DEPENDENCIES_2 = $(top_builddir)/src/libhdf5.la
+h5repack_DEPENDENCIES = $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_2)
+am_h5repacktst_OBJECTS = $(am__objects_1) testh5repack_attr.$(OBJEXT) \
+	testh5repack_dset.$(OBJEXT) testh5repack_main.$(OBJEXT) \
+	testh5repack_make.$(OBJEXT) testh5repack_util.$(OBJEXT)
+h5repacktst_OBJECTS = $(am_h5repacktst_OBJECTS)
+h5repacktst_LDADD = $(LDADD)
+h5repacktst_DEPENDENCIES = $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_2)
+am_testh5repack_detect_szip_OBJECTS =  \
+	testh5repack_detect_szip.$(OBJEXT)
+testh5repack_detect_szip_OBJECTS =  \
+	$(am_testh5repack_detect_szip_OBJECTS)
+testh5repack_detect_szip_LDADD = $(LDADD)
+testh5repack_detect_szip_DEPENDENCIES = $(am__DEPENDENCIES_1) \
+	$(am__DEPENDENCIES_2)
+DEFAULT_INCLUDES = -I. -I$(srcdir) -I$(top_builddir)/src
+depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
+am__depfiles_maybe = depfiles
+COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
+	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
+LTCOMPILE = $(LIBTOOL) --tag=CC --mode=compile $(CC) $(DEFS) \
+	$(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
+	$(AM_CFLAGS) $(CFLAGS)
+CCLD = $(CC)
+LINK = $(LIBTOOL) --tag=CC --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
+	$(AM_LDFLAGS) $(LDFLAGS) -o $@
+SOURCES = $(h5repack_SOURCES) $(h5repacktst_SOURCES) \
+	$(testh5repack_detect_szip_SOURCES)
+DIST_SOURCES = $(h5repack_SOURCES) $(h5repacktst_SOURCES) \
+	$(testh5repack_detect_szip_SOURCES)
+ETAGS = etags
+CTAGS = ctags
+DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
 
 # Set the paths for autotools to be correct on heping.
 # Ideally, these tools should never be needed during the build.
 ACLOCAL = /usr/bin/aclocal
-AUTOCONF = /usr/local/autoconf-2.59/bin/autoconf
-AUTOMAKE = /usr/bin/automake
-AUTOHEADER = /usr/local/autoconf-2.59/bin/autoheader
 ADD_PARALLEL_FILES = @ADD_PARALLEL_FILES@
+AMDEP_FALSE = @AMDEP_FALSE@
+AMDEP_TRUE = @AMDEP_TRUE@
 AMTAR = @AMTAR@
 AM_MAKEFLAGS = @AM_MAKEFLAGS@
 AR = @AR@
-AS = @AS@
+AUTOCONF = /usr/local/autoconf-2.59/bin/autoconf
+AUTOHEADER = /usr/local/autoconf-2.59/bin/autoheader
+AUTOMAKE = /usr/bin/automake
 AWK = @AWK@
+BUILD_CXX_CONDITIONAL_FALSE = @BUILD_CXX_CONDITIONAL_FALSE@
+BUILD_CXX_CONDITIONAL_TRUE = @BUILD_CXX_CONDITIONAL_TRUE@
+BUILD_FORTRAN_CONDITIONAL_FALSE = @BUILD_FORTRAN_CONDITIONAL_FALSE@
+BUILD_FORTRAN_CONDITIONAL_TRUE = @BUILD_FORTRAN_CONDITIONAL_TRUE@
+BUILD_HDF5_HL_CONDITIONAL_FALSE = @BUILD_HDF5_HL_CONDITIONAL_FALSE@
+BUILD_HDF5_HL_CONDITIONAL_TRUE = @BUILD_HDF5_HL_CONDITIONAL_TRUE@
+BUILD_PABLO_CONDITIONAL_FALSE = @BUILD_PABLO_CONDITIONAL_FALSE@
+BUILD_PABLO_CONDITIONAL_TRUE = @BUILD_PABLO_CONDITIONAL_TRUE@
+BUILD_PARALLEL_CONDITIONAL_FALSE = @BUILD_PARALLEL_CONDITIONAL_FALSE@
+BUILD_PARALLEL_CONDITIONAL_TRUE = @BUILD_PARALLEL_CONDITIONAL_TRUE@
 BUILD_PDB2HDF = @BUILD_PDB2HDF@
+BUILD_PDB2HDF_CONDITIONAL_FALSE = @BUILD_PDB2HDF_CONDITIONAL_FALSE@
+BUILD_PDB2HDF_CONDITIONAL_TRUE = @BUILD_PDB2HDF_CONDITIONAL_TRUE@
 BYTESEX = @BYTESEX@
 CC = @CC@
+CCDEPMODE = @CCDEPMODE@
 CC_VERSION = @CC_VERSION@
+CFLAGS = @CFLAGS@
 CONFIG_DATE = @CONFIG_DATE@
 CONFIG_MODE = @CONFIG_MODE@
 CONFIG_USER = @CONFIG_USER@
+CPP = @CPP@
 CPPFLAGS = @CPPFLAGS@
 CXX = @CXX@
 CXXCPP = @CXXCPP@
+CXXDEPMODE = @CXXDEPMODE@
+CXXFLAGS = @CXXFLAGS@
+CYGPATH_W = @CYGPATH_W@
 DEBUG_PKG = @DEBUG_PKG@
+DEFS = @DEFS@
 DEPDIR = @DEPDIR@
-DLLTOOL = @DLLTOOL@
 DYNAMIC_DIRS = @DYNAMIC_DIRS@
 ECHO = @ECHO@
+ECHO_C = @ECHO_C@
+ECHO_N = @ECHO_N@
+ECHO_T = @ECHO_T@
 EGREP = @EGREP@
+EXEEXT = @EXEEXT@
 F77 = @F77@
+
+# Make sure that these variables are exported to the Makefiles
+F9XMODEXT = @F9XMODEXT@
+F9XMODFLAG = @F9XMODFLAG@
 F9XSUFFIXFLAG = @F9XSUFFIXFLAG@
 FC = @FC@
+FCFLAGS = @FCFLAGS@
 FFLAGS = @FFLAGS@
 FILTERS = @FILTERS@
 FSEARCH_DIRS = @FSEARCH_DIRS@
-GCJ = @GCJ@
-GCJFLAGS = @GCJFLAGS@
 H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
 HDF5_INTERFACES = @HDF5_INTERFACES@
@@ -125,21 +185,36 @@ HL_FOR = @HL_FOR@
 HSIZET = @HSIZET@
 HSIZE_T = @HSIZE_T@
 HSSIZE_T = @HSSIZE_T@
+INSTALL_DATA = @INSTALL_DATA@
+INSTALL_PROGRAM = @INSTALL_PROGRAM@
+INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
 INSTRUMENT_LIBRARY = @INSTRUMENT_LIBRARY@
+LDFLAGS = @LDFLAGS@
+LIBOBJS = @LIBOBJS@
+LIBS = @LIBS@
 LIBTOOL = @LIBTOOL@
 LN_S = @LN_S@
+LTLIBOBJS = @LTLIBOBJS@
 LT_STATIC_EXEC = @LT_STATIC_EXEC@
 MAINT = @MAINT@
+MAINTAINER_MODE_FALSE = @MAINTAINER_MODE_FALSE@
+MAINTAINER_MODE_TRUE = @MAINTAINER_MODE_TRUE@
+MAKEINFO = @MAKEINFO@
 MPE = @MPE@
-OBJDUMP = @OBJDUMP@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
+OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
+PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@
+PACKAGE_NAME = @PACKAGE_NAME@
+PACKAGE_STRING = @PACKAGE_STRING@
+PACKAGE_TARNAME = @PACKAGE_TARNAME@
+PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
+PATH_SEPARATOR = @PATH_SEPARATOR@
 PERL = @PERL@
 PTHREAD = @PTHREAD@
 RANLIB = @RANLIB@
-RC = @RC@
 ROOT = @ROOT@
 RUNPARALLEL = @RUNPARALLEL@
 RUNSERIAL = @RUNSERIAL@
@@ -147,6 +222,8 @@ R_INTEGER = @R_INTEGER@
 R_LARGE = @R_LARGE@
 SEARCH = @SEARCH@
 SETX = @SETX@
+SET_MAKE = @SET_MAKE@
+SHELL = @SHELL@
 SIZE_T = @SIZE_T@
 SRB = @SRB@
 STATIC_SHARED = @STATIC_SHARED@
@@ -161,9 +238,52 @@ USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@
 USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@
 USE_FILTER_SZIP = @USE_FILTER_SZIP@
 VERSION = @VERSION@
+ac_ct_AR = @ac_ct_AR@
+ac_ct_CC = @ac_ct_CC@
+ac_ct_CXX = @ac_ct_CXX@
+ac_ct_F77 = @ac_ct_F77@
+ac_ct_FC = @ac_ct_FC@
+ac_ct_RANLIB = @ac_ct_RANLIB@
+ac_ct_STRIP = @ac_ct_STRIP@
+am__fastdepCC_FALSE = @am__fastdepCC_FALSE@
+am__fastdepCC_TRUE = @am__fastdepCC_TRUE@
+am__fastdepCXX_FALSE = @am__fastdepCXX_FALSE@
+am__fastdepCXX_TRUE = @am__fastdepCXX_TRUE@
 am__include = @am__include@
+am__leading_dot = @am__leading_dot@
 am__quote = @am__quote@
+am__tar = @am__tar@
+am__untar = @am__untar@
+bindir = @bindir@
+build = @build@
+build_alias = @build_alias@
+build_cpu = @build_cpu@
+build_os = @build_os@
+build_vendor = @build_vendor@
+datadir = @datadir@
+exec_prefix = @exec_prefix@
+host = @host@
+host_alias = @host_alias@
+host_cpu = @host_cpu@
+host_os = @host_os@
+host_vendor = @host_vendor@
+
+# Install directories that automake doesn't know about
+includedir = $(exec_prefix)/include
+infodir = @infodir@
 install_sh = @install_sh@
+libdir = @libdir@
+libexecdir = @libexecdir@
+localstatedir = @localstatedir@
+mandir = @mandir@
+mkdir_p = @mkdir_p@
+oldincludedir = @oldincludedir@
+prefix = @prefix@
+program_transform_name = @program_transform_name@
+sbindir = @sbindir@
+sharedstatedir = @sharedstatedir@
+sysconfdir = @sysconfdir@
+target_alias = @target_alias@
 
 # Shell commands used in Makefiles
 RM = rm -f
@@ -186,23 +306,13 @@ H5CC_PP = $(bindir)/h5pcc
 H5FC = $(bindir)/h5fc
 H5FC_PP = $(bindir)/h5pfc
 
-# Make sure that these variables are exported to the Makefiles
-F9XMODEXT = @F9XMODEXT@
-F9XMODFLAG = @F9XMODFLAG@
-
 # Include src, test, and tools/lib directories
 INCLUDES = -I$(top_srcdir)/src -I$(top_srcdir)/test -I$(top_srcdir)/tools/lib
 
 # Test programs and scripts
 TEST_SCRIPT = h5repack.sh
 TEST_PROG = h5repacktst
-noinst_PROGRAMS = testh5repack_detect_szip
-
 check_SCRIPTS = $(TEST_SCRIPT)
-check_PROGRAMS = $(TEST_PROG)
-
-# Our main target, h5repack tool
-bin_PROGRAMS = h5repack
 
 # All programs depend on the hdf5 library and the tools library
 LDADD = $(LIBH5TOOLS) $(LIBHDF5)
@@ -212,13 +322,10 @@ COMMON_SOURCES = h5repack.c h5repack_copy.c h5repack_filters.c \
         h5repack_list.c h5repack_opttable.c h5repack_parse.c h5repack_refs.c   \
         h5repack_verify.c
 
-
 h5repack_SOURCES = $(COMMON_SOURCES) h5repack_main.c
-
 h5repacktst_SOURCES = $(COMMON_SOURCES) testh5repack_attr.c testh5repack_dset.c \
         testh5repack_main.c testh5repack_make.c testh5repack_util.c
 
-
 testh5repack_detect_szip_SOURCES = testh5repack_detect_szip.c
 
 # Temporary files.  *.h5 are generated by h5repack.  They should
@@ -238,99 +345,52 @@ PROGS = $(bin_PROGRAMS) $(bin_SCRIPTS) $(noinst_PROGRAMS) $(noinst_SCRIPTS)   \
         $(EXTRA_PROG)
 
 TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST) 
-subdir = tools/h5repack
-mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
-CONFIG_HEADER = $(top_builddir)/src/H5config.h
-CONFIG_CLEAN_FILES = h5repack.sh
-bin_PROGRAMS = h5repack$(EXEEXT)
-check_PROGRAMS = h5repacktst$(EXEEXT)
-noinst_PROGRAMS = testh5repack_detect_szip$(EXEEXT)
-PROGRAMS = $(bin_PROGRAMS) $(noinst_PROGRAMS)
-
-am__objects_1 = h5repack.$(OBJEXT) h5repack_copy.$(OBJEXT) \
-	h5repack_filters.$(OBJEXT) h5repack_list.$(OBJEXT) \
-	h5repack_opttable.$(OBJEXT) h5repack_parse.$(OBJEXT) \
-	h5repack_refs.$(OBJEXT) h5repack_verify.$(OBJEXT)
-am_h5repack_OBJECTS = $(am__objects_1) h5repack_main.$(OBJEXT)
-h5repack_OBJECTS = $(am_h5repack_OBJECTS)
-h5repack_LDADD = $(LDADD)
-h5repack_DEPENDENCIES = $(top_builddir)/tools/lib/libh5tools.la \
-	$(top_builddir)/src/libhdf5.la
-h5repack_LDFLAGS =
-am_h5repacktst_OBJECTS = $(am__objects_1) testh5repack_attr.$(OBJEXT) \
-	testh5repack_dset.$(OBJEXT) testh5repack_main.$(OBJEXT) \
-	testh5repack_make.$(OBJEXT) testh5repack_util.$(OBJEXT)
-h5repacktst_OBJECTS = $(am_h5repacktst_OBJECTS)
-h5repacktst_LDADD = $(LDADD)
-h5repacktst_DEPENDENCIES = $(top_builddir)/tools/lib/libh5tools.la \
-	$(top_builddir)/src/libhdf5.la
-h5repacktst_LDFLAGS =
-am_testh5repack_detect_szip_OBJECTS = testh5repack_detect_szip.$(OBJEXT)
-testh5repack_detect_szip_OBJECTS = \
-	$(am_testh5repack_detect_szip_OBJECTS)
-testh5repack_detect_szip_LDADD = $(LDADD)
-testh5repack_detect_szip_DEPENDENCIES = \
-	$(top_builddir)/tools/lib/libh5tools.la \
-	$(top_builddir)/src/libhdf5.la
-testh5repack_detect_szip_LDFLAGS =
-
-DEFS = @DEFS@
-DEFAULT_INCLUDES =  -I. -I$(srcdir) -I$(top_builddir)/src
-LDFLAGS = @LDFLAGS@
-LIBS = @LIBS@
-depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
-am__depfiles_maybe = depfiles
-@AMDEP_TRUE@DEP_FILES = ./$(DEPDIR)/h5repack.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/h5repack_copy.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/h5repack_filters.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/h5repack_list.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/h5repack_main.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/h5repack_opttable.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/h5repack_parse.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/h5repack_refs.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/h5repack_verify.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/testh5repack_attr.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/testh5repack_detect_szip.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/testh5repack_dset.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/testh5repack_main.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/testh5repack_make.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/testh5repack_util.Po
-COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
-	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
-LTCOMPILE = $(LIBTOOL) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) \
-	$(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
-CCLD = $(CC)
-LINK = $(LIBTOOL) --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
-	$(AM_LDFLAGS) $(LDFLAGS) -o $@
-CFLAGS = @CFLAGS@
-DIST_SOURCES = $(h5repack_SOURCES) $(h5repacktst_SOURCES) \
-	$(testh5repack_detect_szip_SOURCES)
-DIST_COMMON = Makefile.am Makefile.in h5repack.sh.in
-SOURCES = $(h5repack_SOURCES) $(h5repacktst_SOURCES) $(testh5repack_detect_szip_SOURCES)
-
 all: all-am
 
 .SUFFIXES:
 .SUFFIXES: .c .lo .o .obj
-$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(top_srcdir)/configure.in $(ACLOCAL_M4)
+$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(am__configure_deps)
+	@for dep in $?; do \
+	  case '$(am__configure_deps)' in \
+	    *$$dep*) \
+	      cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh \
+		&& exit 0; \
+	      exit 1;; \
+	  esac; \
+	done; \
+	echo ' cd $(top_srcdir) && $(AUTOMAKE) --foreign  tools/h5repack/Makefile'; \
 	cd $(top_srcdir) && \
 	  $(AUTOMAKE) --foreign  tools/h5repack/Makefile
-Makefile: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.in  $(top_builddir)/config.status
-	cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)
-h5repack.sh: $(top_builddir)/config.status h5repack.sh.in
+.PRECIOUS: Makefile
+Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+	@case '$?' in \
+	  *config.status*) \
+	    cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh;; \
+	  *) \
+	    echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)'; \
+	    cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe);; \
+	esac;
+
+$(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+
+$(top_srcdir)/configure: @MAINTAINER_MODE_TRUE@ $(am__configure_deps)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+$(ACLOCAL_M4): @MAINTAINER_MODE_TRUE@ $(am__aclocal_m4_deps)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+h5repack.sh: $(top_builddir)/config.status $(srcdir)/h5repack.sh.in
 	cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@
-binPROGRAMS_INSTALL = $(INSTALL_PROGRAM)
 install-binPROGRAMS: $(bin_PROGRAMS)
 	@$(NORMAL_INSTALL)
-	$(mkinstalldirs) $(DESTDIR)$(bindir)
+	test -z "$(bindir)" || $(mkdir_p) "$(DESTDIR)$(bindir)"
 	@list='$(bin_PROGRAMS)'; for p in $$list; do \
 	  p1=`echo $$p|sed 's/$(EXEEXT)$$//'`; \
 	  if test -f $$p \
 	     || test -f $$p1 \
 	  ; then \
 	    f=`echo "$$p1" | sed 's,^.*/,,;$(transform);s/$$/$(EXEEXT)/'`; \
-	   echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) $$p $(DESTDIR)$(bindir)/$$f"; \
-	   $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) $$p $(DESTDIR)$(bindir)/$$f; \
+	   echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) '$$p' '$(DESTDIR)$(bindir)/$$f'"; \
+	   $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) "$$p" "$(DESTDIR)$(bindir)/$$f" || exit 1; \
 	  else :; fi; \
 	done
 
@@ -338,8 +398,8 @@ uninstall-binPROGRAMS:
 	@$(NORMAL_UNINSTALL)
 	@list='$(bin_PROGRAMS)'; for p in $$list; do \
 	  f=`echo "$$p" | sed 's,^.*/,,;s/$(EXEEXT)$$//;$(transform);s/$$/$(EXEEXT)/'`; \
-	  echo " rm -f $(DESTDIR)$(bindir)/$$f"; \
-	  rm -f $(DESTDIR)$(bindir)/$$f; \
+	  echo " rm -f '$(DESTDIR)$(bindir)/$$f'"; \
+	  rm -f "$(DESTDIR)$(bindir)/$$f"; \
 	done
 
 clean-binPROGRAMS:
@@ -373,7 +433,7 @@ testh5repack_detect_szip$(EXEEXT): $(testh5repack_detect_szip_OBJECTS) $(testh5r
 	$(LINK) $(testh5repack_detect_szip_LDFLAGS) $(testh5repack_detect_szip_OBJECTS) $(testh5repack_detect_szip_LDADD) $(LIBS)
 
 mostlyclean-compile:
-	-rm -f *.$(OBJEXT) core *.core
+	-rm -f *.$(OBJEXT)
 
 distclean-compile:
 	-rm -f *.tab.c
@@ -394,27 +454,26 @@ distclean-compile:
 @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/testh5repack_make.Po@am__quote@
 @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/testh5repack_util.Po@am__quote@
 
-distclean-depend:
-	-rm -rf ./$(DEPDIR)
-
 .c.o:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Po' tmpdepfile='$(DEPDIR)/$*.TPo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(COMPILE) -c `test -f '$<' || echo '$(srcdir)/'`$<
+@am__fastdepCC_TRUE@	if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ $<; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(COMPILE) -c $<
 
 .c.obj:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Po' tmpdepfile='$(DEPDIR)/$*.TPo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(COMPILE) -c `cygpath -w $<`
+@am__fastdepCC_TRUE@	if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ `$(CYGPATH_W) '$<'`; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(COMPILE) -c `$(CYGPATH_W) '$<'`
 
 .c.lo:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Plo' tmpdepfile='$(DEPDIR)/$*.TPlo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(LTCOMPILE) -c -o $@ `test -f '$<' || echo '$(srcdir)/'`$<
-CCDEPMODE = @CCDEPMODE@
+@am__fastdepCC_TRUE@	if $(LTCOMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ $<; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Plo"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(LTCOMPILE) -c -o $@ $<
 
 mostlyclean-libtool:
 	-rm -f *.lo
@@ -426,11 +485,6 @@ distclean-libtool:
 	-rm -f libtool
 uninstall-info-am:
 
-ETAGS = etags
-ETAGSFLAGS =
-
-tags: TAGS
-
 ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
@@ -439,6 +493,7 @@ ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	  $(AWK) '    { files[$$0] = 1; } \
 	       END { for (i in files) print i; }'`; \
 	mkid -fID $$unique
+tags: TAGS
 
 TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
@@ -450,8 +505,24 @@ TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 	  done | \
 	  $(AWK) '    { files[$$0] = 1; } \
 	       END { for (i in files) print i; }'`; \
-	test -z "$(ETAGS_ARGS)$$tags$$unique" \
-	  || $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
+	  test -n "$$unique" || unique=$$empty_fix; \
+	  $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	    $$tags $$unique; \
+	fi
+ctags: CTAGS
+CTAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
+		$(TAGS_FILES) $(LISP)
+	tags=; \
+	here=`pwd`; \
+	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
+	unique=`for i in $$list; do \
+	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
+	  done | \
+	  $(AWK) '    { files[$$0] = 1; } \
+	       END { for (i in files) print i; }'`; \
+	test -z "$(CTAGS_ARGS)$$tags$$unique" \
+	  || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
 	     $$tags $$unique
 
 GTAGS:
@@ -460,19 +531,22 @@ GTAGS:
 	  && gtags -i $(GTAGS_ARGS) $$here
 
 distclean-tags:
-	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH
-DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
-
-top_distdir = ../..
-distdir = $(top_distdir)/$(PACKAGE)-$(VERSION)
+	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
 
 distdir: $(DISTFILES)
-	@list='$(DISTFILES)'; for file in $$list; do \
+	$(mkdir_p) $(distdir)/../../config
+	@srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`; \
+	topsrcdirstrip=`echo "$(top_srcdir)" | sed 's|.|.|g'`; \
+	list='$(DISTFILES)'; for file in $$list; do \
+	  case $$file in \
+	    $(srcdir)/*) file=`echo "$$file" | sed "s|^$$srcdirstrip/||"`;; \
+	    $(top_srcdir)/*) file=`echo "$$file" | sed "s|^$$topsrcdirstrip/|$(top_builddir)/|"`;; \
+	  esac; \
 	  if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
 	  dir=`echo "$$file" | sed -e 's,/[^/]*$$,,'`; \
 	  if test "$$dir" != "$$file" && test "$$dir" != "."; then \
 	    dir="/$$dir"; \
-	    $(mkinstalldirs) "$(distdir)$$dir"; \
+	    $(mkdir_p) "$(distdir)$$dir"; \
 	  else \
 	    dir=''; \
 	  fi; \
@@ -492,10 +566,10 @@ check-am: all-am
 	$(MAKE) $(AM_MAKEFLAGS) check-TESTS
 check: check-am
 all-am: Makefile $(PROGRAMS) all-local
-
 installdirs:
-	$(mkinstalldirs) $(DESTDIR)$(bindir)
-
+	for dir in "$(DESTDIR)$(bindir)"; do \
+	  test -z "$$dir" || $(mkdir_p) "$$dir"; \
+	done
 install: install-am
 install-exec: install-exec-am
 install-data: install-data-am
@@ -507,7 +581,7 @@ install-am: all-am
 installcheck: installcheck-am
 install-strip:
 	$(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
-	  INSTALL_STRIP_FLAG=-s \
+	  install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
 	  `test -z '$(STRIP)' || \
 	    echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install
 mostlyclean-generic:
@@ -516,7 +590,7 @@ mostlyclean-generic:
 clean-generic:
 
 distclean-generic:
-	-rm -f Makefile $(CONFIG_CLEAN_FILES)
+	-test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
 	-test -z "$(DISTCLEANFILES)" || rm -f $(DISTCLEANFILES)
 
 maintainer-clean-generic:
@@ -528,14 +602,17 @@ clean-am: clean-binPROGRAMS clean-checkPROGRAMS clean-generic \
 	clean-libtool clean-noinstPROGRAMS mostlyclean-am
 
 distclean: distclean-am
-
-distclean-am: clean-am distclean-compile distclean-depend \
-	distclean-generic distclean-libtool distclean-tags
+	-rm -rf ./$(DEPDIR)
+	-rm -f Makefile
+distclean-am: clean-am distclean-compile distclean-generic \
+	distclean-libtool distclean-tags
 
 dvi: dvi-am
 
 dvi-am:
 
+html: html-am
+
 info: info-am
 
 info-am:
@@ -551,7 +628,8 @@ install-man:
 installcheck-am:
 
 maintainer-clean: maintainer-clean-am
-
+	-rm -rf ./$(DEPDIR)
+	-rm -f Makefile
 maintainer-clean-am: distclean-am maintainer-clean-generic
 
 mostlyclean: mostlyclean-am
@@ -559,20 +637,29 @@ mostlyclean: mostlyclean-am
 mostlyclean-am: mostlyclean-compile mostlyclean-generic \
 	mostlyclean-libtool
 
+pdf: pdf-am
+
+pdf-am:
+
+ps: ps-am
+
+ps-am:
+
 uninstall-am: uninstall-binPROGRAMS uninstall-info-am
 
-.PHONY: GTAGS all all-am all-local check check-TESTS check-am clean \
-	clean-binPROGRAMS clean-checkPROGRAMS clean-generic \
-	clean-libtool clean-noinstPROGRAMS distclean distclean-compile \
-	distclean-depend distclean-generic distclean-libtool \
-	distclean-tags distdir dvi dvi-am info info-am install \
-	install-am install-binPROGRAMS install-data install-data-am \
-	install-exec install-exec-am install-info install-info-am \
-	install-man install-strip installcheck installcheck-am \
-	installdirs maintainer-clean maintainer-clean-generic \
-	mostlyclean mostlyclean-compile mostlyclean-generic \
-	mostlyclean-libtool tags uninstall uninstall-am \
-	uninstall-binPROGRAMS uninstall-info-am
+.PHONY: CTAGS GTAGS all all-am all-local check check-TESTS check-am \
+	clean clean-binPROGRAMS clean-checkPROGRAMS clean-generic \
+	clean-libtool clean-noinstPROGRAMS ctags distclean \
+	distclean-compile distclean-generic distclean-libtool \
+	distclean-tags distdir dvi dvi-am html html-am info info-am \
+	install install-am install-binPROGRAMS install-data \
+	install-data-am install-exec install-exec-am install-info \
+	install-info-am install-man install-strip installcheck \
+	installcheck-am installdirs maintainer-clean \
+	maintainer-clean-generic mostlyclean mostlyclean-compile \
+	mostlyclean-generic mostlyclean-libtool pdf pdf-am ps ps-am \
+	tags uninstall uninstall-am uninstall-binPROGRAMS \
+	uninstall-info-am
 
 
 # lib/progs/tests targets recurse into subdirectories. build-* targets
diff --git a/tools/lib/Makefile.in b/tools/lib/Makefile.in
index 81f6d46..ad0b9d9 100644
--- a/tools/lib/Makefile.in
+++ b/tools/lib/Makefile.in
@@ -1,8 +1,8 @@
-# Makefile.in generated by automake 1.6.3 from Makefile.am.
+# Makefile.in generated by automake 1.9.5 from Makefile.am.
 # @configure_input@
 
-# Copyright 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002
-# Free Software Foundation, Inc.
+# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
+# 2003, 2004, 2005  Free Software Foundation, Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -29,93 +29,135 @@
 #
 # HDF5 Library Makefile(.in)
 #
-SHELL = @SHELL@
+
+SOURCES = $(libh5tools_la_SOURCES) talign.c
 
 srcdir = @srcdir@
 top_srcdir = @top_srcdir@
 VPATH = @srcdir@
-prefix = @prefix@
-exec_prefix = @exec_prefix@
-
-bindir = @bindir@
-sbindir = @sbindir@
-libexecdir = @libexecdir@
-datadir = @datadir@
-sysconfdir = @sysconfdir@
-sharedstatedir = @sharedstatedir@
-localstatedir = @localstatedir@
-libdir = @libdir@
-infodir = @infodir@
-mandir = @mandir@
-oldincludedir = /usr/include
 pkgdatadir = $(datadir)/@PACKAGE@
 pkglibdir = $(libdir)/@PACKAGE@
 pkgincludedir = $(includedir)/@PACKAGE@
 top_builddir = ../..
-
 am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
 INSTALL = @INSTALL@
-INSTALL_PROGRAM = @INSTALL_PROGRAM@
-INSTALL_DATA = @INSTALL_DATA@
 install_sh_DATA = $(install_sh) -c -m 644
 install_sh_PROGRAM = $(install_sh) -c
 install_sh_SCRIPT = $(install_sh) -c
-INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_HEADER = $(INSTALL_DATA)
-transform = @program_transform_name@
+transform = $(program_transform_name)
 NORMAL_INSTALL = :
 PRE_INSTALL = :
 POST_INSTALL = :
 NORMAL_UNINSTALL = :
 PRE_UNINSTALL = :
 POST_UNINSTALL = :
-host_alias = @host_alias@
+build_triplet = @build@
 host_triplet = @host@
-
-EXEEXT = @EXEEXT@
-OBJEXT = @OBJEXT@
-PATH_SEPARATOR = @PATH_SEPARATOR@
-
-# Install directories that automake doesn't know about
-includedir = $(exec_prefix)/include
-
+DIST_COMMON = $(srcdir)/Makefile.am $(srcdir)/Makefile.in \
+	$(top_srcdir)/config/commence.am \
+	$(top_srcdir)/config/conclude.am
+check_PROGRAMS = $(am__EXEEXT_1)
+subdir = tools/lib
+ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
+am__aclocal_m4_deps = $(top_srcdir)/configure.in
+am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+	$(ACLOCAL_M4)
+mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
+CONFIG_HEADER = $(top_builddir)/src/H5config.h
+CONFIG_CLEAN_FILES =
+LTLIBRARIES = $(noinst_LTLIBRARIES)
+libh5tools_la_LIBADD =
+am_libh5tools_la_OBJECTS = h5tools.lo h5tools_str.lo h5tools_utils.lo \
+	h5diff.lo h5diff_array.lo h5diff_attr.lo h5diff_dset.lo \
+	h5diff_util.lo h5trav.lo h5trav_table.lo h5tools_filters.lo \
+	h5tools_ref.lo h5tools_type.lo
+libh5tools_la_OBJECTS = $(am_libh5tools_la_OBJECTS)
+am__EXEEXT_1 = talign$(EXEEXT)
+talign_SOURCES = talign.c
+talign_OBJECTS = talign.$(OBJEXT)
+talign_LDADD = $(LDADD)
+am__DEPENDENCIES_1 = $(top_builddir)/src/libhdf5.la
+talign_DEPENDENCIES = libh5tools.la $(am__DEPENDENCIES_1)
+DEFAULT_INCLUDES = -I. -I$(srcdir) -I$(top_builddir)/src
+depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
+am__depfiles_maybe = depfiles
+COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
+	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
+LTCOMPILE = $(LIBTOOL) --tag=CC --mode=compile $(CC) $(DEFS) \
+	$(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
+	$(AM_CFLAGS) $(CFLAGS)
+CCLD = $(CC)
+LINK = $(LIBTOOL) --tag=CC --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
+	$(AM_LDFLAGS) $(LDFLAGS) -o $@
+SOURCES = $(libh5tools_la_SOURCES) talign.c
+DIST_SOURCES = $(libh5tools_la_SOURCES) talign.c
+ETAGS = etags
+CTAGS = ctags
+DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
 
 # Set the paths for autotools to be correct on heping.
 # Ideally, these tools should never be needed during the build.
 ACLOCAL = /usr/bin/aclocal
-AUTOCONF = /usr/local/autoconf-2.59/bin/autoconf
-AUTOMAKE = /usr/bin/automake
-AUTOHEADER = /usr/local/autoconf-2.59/bin/autoheader
 ADD_PARALLEL_FILES = @ADD_PARALLEL_FILES@
+AMDEP_FALSE = @AMDEP_FALSE@
+AMDEP_TRUE = @AMDEP_TRUE@
 AMTAR = @AMTAR@
 AM_MAKEFLAGS = @AM_MAKEFLAGS@
 AR = @AR@
-AS = @AS@
+AUTOCONF = /usr/local/autoconf-2.59/bin/autoconf
+AUTOHEADER = /usr/local/autoconf-2.59/bin/autoheader
+AUTOMAKE = /usr/bin/automake
 AWK = @AWK@
+BUILD_CXX_CONDITIONAL_FALSE = @BUILD_CXX_CONDITIONAL_FALSE@
+BUILD_CXX_CONDITIONAL_TRUE = @BUILD_CXX_CONDITIONAL_TRUE@
+BUILD_FORTRAN_CONDITIONAL_FALSE = @BUILD_FORTRAN_CONDITIONAL_FALSE@
+BUILD_FORTRAN_CONDITIONAL_TRUE = @BUILD_FORTRAN_CONDITIONAL_TRUE@
+BUILD_HDF5_HL_CONDITIONAL_FALSE = @BUILD_HDF5_HL_CONDITIONAL_FALSE@
+BUILD_HDF5_HL_CONDITIONAL_TRUE = @BUILD_HDF5_HL_CONDITIONAL_TRUE@
+BUILD_PABLO_CONDITIONAL_FALSE = @BUILD_PABLO_CONDITIONAL_FALSE@
+BUILD_PABLO_CONDITIONAL_TRUE = @BUILD_PABLO_CONDITIONAL_TRUE@
+BUILD_PARALLEL_CONDITIONAL_FALSE = @BUILD_PARALLEL_CONDITIONAL_FALSE@
+BUILD_PARALLEL_CONDITIONAL_TRUE = @BUILD_PARALLEL_CONDITIONAL_TRUE@
 BUILD_PDB2HDF = @BUILD_PDB2HDF@
+BUILD_PDB2HDF_CONDITIONAL_FALSE = @BUILD_PDB2HDF_CONDITIONAL_FALSE@
+BUILD_PDB2HDF_CONDITIONAL_TRUE = @BUILD_PDB2HDF_CONDITIONAL_TRUE@
 BYTESEX = @BYTESEX@
 CC = @CC@
+CCDEPMODE = @CCDEPMODE@
 CC_VERSION = @CC_VERSION@
+CFLAGS = @CFLAGS@
 CONFIG_DATE = @CONFIG_DATE@
 CONFIG_MODE = @CONFIG_MODE@
 CONFIG_USER = @CONFIG_USER@
+CPP = @CPP@
 CPPFLAGS = @CPPFLAGS@
 CXX = @CXX@
 CXXCPP = @CXXCPP@
+CXXDEPMODE = @CXXDEPMODE@
+CXXFLAGS = @CXXFLAGS@
+CYGPATH_W = @CYGPATH_W@
 DEBUG_PKG = @DEBUG_PKG@
+DEFS = @DEFS@
 DEPDIR = @DEPDIR@
-DLLTOOL = @DLLTOOL@
 DYNAMIC_DIRS = @DYNAMIC_DIRS@
 ECHO = @ECHO@
+ECHO_C = @ECHO_C@
+ECHO_N = @ECHO_N@
+ECHO_T = @ECHO_T@
 EGREP = @EGREP@
+EXEEXT = @EXEEXT@
 F77 = @F77@
+
+# Make sure that these variables are exported to the Makefiles
+F9XMODEXT = @F9XMODEXT@
+F9XMODFLAG = @F9XMODFLAG@
 F9XSUFFIXFLAG = @F9XSUFFIXFLAG@
 FC = @FC@
+FCFLAGS = @FCFLAGS@
 FFLAGS = @FFLAGS@
 FILTERS = @FILTERS@
 FSEARCH_DIRS = @FSEARCH_DIRS@
-GCJ = @GCJ@
-GCJFLAGS = @GCJFLAGS@
 H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
 HDF5_INTERFACES = @HDF5_INTERFACES@
@@ -125,21 +167,36 @@ HL_FOR = @HL_FOR@
 HSIZET = @HSIZET@
 HSIZE_T = @HSIZE_T@
 HSSIZE_T = @HSSIZE_T@
+INSTALL_DATA = @INSTALL_DATA@
+INSTALL_PROGRAM = @INSTALL_PROGRAM@
+INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
 INSTRUMENT_LIBRARY = @INSTRUMENT_LIBRARY@
+LDFLAGS = @LDFLAGS@
+LIBOBJS = @LIBOBJS@
+LIBS = @LIBS@
 LIBTOOL = @LIBTOOL@
 LN_S = @LN_S@
+LTLIBOBJS = @LTLIBOBJS@
 LT_STATIC_EXEC = @LT_STATIC_EXEC@
 MAINT = @MAINT@
+MAINTAINER_MODE_FALSE = @MAINTAINER_MODE_FALSE@
+MAINTAINER_MODE_TRUE = @MAINTAINER_MODE_TRUE@
+MAKEINFO = @MAKEINFO@
 MPE = @MPE@
-OBJDUMP = @OBJDUMP@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
+OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
+PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@
+PACKAGE_NAME = @PACKAGE_NAME@
+PACKAGE_STRING = @PACKAGE_STRING@
+PACKAGE_TARNAME = @PACKAGE_TARNAME@
+PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
+PATH_SEPARATOR = @PATH_SEPARATOR@
 PERL = @PERL@
 PTHREAD = @PTHREAD@
 RANLIB = @RANLIB@
-RC = @RC@
 ROOT = @ROOT@
 RUNPARALLEL = @RUNPARALLEL@
 RUNSERIAL = @RUNSERIAL@
@@ -147,6 +204,8 @@ R_INTEGER = @R_INTEGER@
 R_LARGE = @R_LARGE@
 SEARCH = @SEARCH@
 SETX = @SETX@
+SET_MAKE = @SET_MAKE@
+SHELL = @SHELL@
 SIZE_T = @SIZE_T@
 SRB = @SRB@
 STATIC_SHARED = @STATIC_SHARED@
@@ -161,9 +220,52 @@ USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@
 USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@
 USE_FILTER_SZIP = @USE_FILTER_SZIP@
 VERSION = @VERSION@
+ac_ct_AR = @ac_ct_AR@
+ac_ct_CC = @ac_ct_CC@
+ac_ct_CXX = @ac_ct_CXX@
+ac_ct_F77 = @ac_ct_F77@
+ac_ct_FC = @ac_ct_FC@
+ac_ct_RANLIB = @ac_ct_RANLIB@
+ac_ct_STRIP = @ac_ct_STRIP@
+am__fastdepCC_FALSE = @am__fastdepCC_FALSE@
+am__fastdepCC_TRUE = @am__fastdepCC_TRUE@
+am__fastdepCXX_FALSE = @am__fastdepCXX_FALSE@
+am__fastdepCXX_TRUE = @am__fastdepCXX_TRUE@
 am__include = @am__include@
+am__leading_dot = @am__leading_dot@
 am__quote = @am__quote@
+am__tar = @am__tar@
+am__untar = @am__untar@
+bindir = @bindir@
+build = @build@
+build_alias = @build_alias@
+build_cpu = @build_cpu@
+build_os = @build_os@
+build_vendor = @build_vendor@
+datadir = @datadir@
+exec_prefix = @exec_prefix@
+host = @host@
+host_alias = @host_alias@
+host_cpu = @host_cpu@
+host_os = @host_os@
+host_vendor = @host_vendor@
+
+# Install directories that automake doesn't know about
+includedir = $(exec_prefix)/include
+infodir = @infodir@
 install_sh = @install_sh@
+libdir = @libdir@
+libexecdir = @libexecdir@
+localstatedir = @localstatedir@
+mandir = @mandir@
+mkdir_p = @mkdir_p@
+oldincludedir = @oldincludedir@
+prefix = @prefix@
+program_transform_name = @program_transform_name@
+sbindir = @sbindir@
+sharedstatedir = @sharedstatedir@
+sysconfdir = @sysconfdir@
+target_alias = @target_alias@
 
 # Shell commands used in Makefiles
 RM = rm -f
@@ -186,10 +288,6 @@ H5CC_PP = $(bindir)/h5pcc
 H5FC = $(bindir)/h5fc
 H5FC_PP = $(bindir)/h5pfc
 
-# Make sure that these variables are exported to the Makefiles
-F9XMODEXT = @F9XMODEXT@
-F9XMODFLAG = @F9XMODFLAG@
-
 # Include files in /src directory
 INCLUDES = -I$(top_srcdir)/src
 
@@ -208,7 +306,6 @@ LIBADD = $(LIBHDF5)
 
 # Test program.  Link using libhdf5 and libh5tools
 TEST_PROG = talign
-check_PROGRAMS = $(TEST_PROG)
 
 # Name libh5tools.la so that dependencies work out. Automake knows how
 # to build 'libh5tools.la', but not '../../tools/lib/libh5tools.la'.
@@ -226,70 +323,45 @@ PROGS = $(bin_PROGRAMS) $(bin_SCRIPTS) $(noinst_PROGRAMS) $(noinst_SCRIPTS)   \
         $(EXTRA_PROG)
 
 TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST) 
-subdir = tools/lib
-mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
-CONFIG_HEADER = $(top_builddir)/src/H5config.h
-CONFIG_CLEAN_FILES =
-LTLIBRARIES = $(noinst_LTLIBRARIES)
-
-libh5tools_la_LIBADD =
-am_libh5tools_la_OBJECTS = h5tools.lo h5tools_str.lo h5tools_utils.lo \
-	h5diff.lo h5diff_array.lo h5diff_attr.lo h5diff_dset.lo \
-	h5diff_util.lo h5trav.lo h5trav_table.lo h5tools_filters.lo \
-	h5tools_ref.lo h5tools_type.lo
-libh5tools_la_OBJECTS = $(am_libh5tools_la_OBJECTS)
-check_PROGRAMS = talign$(EXEEXT)
-talign_SOURCES = talign.c
-talign_OBJECTS = talign.$(OBJEXT)
-talign_LDADD = $(LDADD)
-talign_DEPENDENCIES = libh5tools.la $(top_builddir)/src/libhdf5.la
-talign_LDFLAGS =
-
-DEFS = @DEFS@
-DEFAULT_INCLUDES =  -I. -I$(srcdir) -I$(top_builddir)/src
-LDFLAGS = @LDFLAGS@
-LIBS = @LIBS@
-depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
-am__depfiles_maybe = depfiles
-@AMDEP_TRUE@DEP_FILES = ./$(DEPDIR)/h5diff.Plo \
-@AMDEP_TRUE@	./$(DEPDIR)/h5diff_array.Plo \
-@AMDEP_TRUE@	./$(DEPDIR)/h5diff_attr.Plo \
-@AMDEP_TRUE@	./$(DEPDIR)/h5diff_dset.Plo \
-@AMDEP_TRUE@	./$(DEPDIR)/h5diff_util.Plo ./$(DEPDIR)/h5tools.Plo \
-@AMDEP_TRUE@	./$(DEPDIR)/h5tools_filters.Plo \
-@AMDEP_TRUE@	./$(DEPDIR)/h5tools_ref.Plo \
-@AMDEP_TRUE@	./$(DEPDIR)/h5tools_str.Plo \
-@AMDEP_TRUE@	./$(DEPDIR)/h5tools_type.Plo \
-@AMDEP_TRUE@	./$(DEPDIR)/h5tools_utils.Plo \
-@AMDEP_TRUE@	./$(DEPDIR)/h5trav.Plo ./$(DEPDIR)/h5trav_table.Plo \
-@AMDEP_TRUE@	./$(DEPDIR)/talign.Po
-COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
-	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
-LTCOMPILE = $(LIBTOOL) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) \
-	$(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
-CCLD = $(CC)
-LINK = $(LIBTOOL) --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
-	$(AM_LDFLAGS) $(LDFLAGS) -o $@
-CFLAGS = @CFLAGS@
-DIST_SOURCES = $(libh5tools_la_SOURCES) talign.c
-DIST_COMMON = Makefile.am Makefile.in
-SOURCES = $(libh5tools_la_SOURCES) talign.c
-
 all: all-am
 
 .SUFFIXES:
 .SUFFIXES: .c .lo .o .obj
-$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(top_srcdir)/configure.in $(ACLOCAL_M4)
+$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(am__configure_deps)
+	@for dep in $?; do \
+	  case '$(am__configure_deps)' in \
+	    *$$dep*) \
+	      cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh \
+		&& exit 0; \
+	      exit 1;; \
+	  esac; \
+	done; \
+	echo ' cd $(top_srcdir) && $(AUTOMAKE) --foreign  tools/lib/Makefile'; \
 	cd $(top_srcdir) && \
 	  $(AUTOMAKE) --foreign  tools/lib/Makefile
-Makefile: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.in  $(top_builddir)/config.status
-	cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)
+.PRECIOUS: Makefile
+Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+	@case '$?' in \
+	  *config.status*) \
+	    cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh;; \
+	  *) \
+	    echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)'; \
+	    cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe);; \
+	esac;
+
+$(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+
+$(top_srcdir)/configure: @MAINTAINER_MODE_TRUE@ $(am__configure_deps)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+$(ACLOCAL_M4): @MAINTAINER_MODE_TRUE@ $(am__aclocal_m4_deps)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
 
 clean-noinstLTLIBRARIES:
 	-test -z "$(noinst_LTLIBRARIES)" || rm -f $(noinst_LTLIBRARIES)
 	@list='$(noinst_LTLIBRARIES)'; for p in $$list; do \
 	  dir="`echo $$p | sed -e 's|/[^/]*$$||'`"; \
-	  test -z "$dir" && dir=.; \
+	  test "$$dir" != "$$p" || dir=.; \
 	  echo "rm -f \"$${dir}/so_locations\""; \
 	  rm -f "$${dir}/so_locations"; \
 	done
@@ -307,7 +379,7 @@ talign$(EXEEXT): $(talign_OBJECTS) $(talign_DEPENDENCIES)
 	$(LINK) $(talign_LDFLAGS) $(talign_OBJECTS) $(talign_LDADD) $(LIBS)
 
 mostlyclean-compile:
-	-rm -f *.$(OBJEXT) core *.core
+	-rm -f *.$(OBJEXT)
 
 distclean-compile:
 	-rm -f *.tab.c
@@ -327,27 +399,26 @@ distclean-compile:
 @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/h5trav_table.Plo@am__quote@
 @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/talign.Po@am__quote@
 
-distclean-depend:
-	-rm -rf ./$(DEPDIR)
-
 .c.o:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Po' tmpdepfile='$(DEPDIR)/$*.TPo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(COMPILE) -c `test -f '$<' || echo '$(srcdir)/'`$<
+@am__fastdepCC_TRUE@	if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ $<; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(COMPILE) -c $<
 
 .c.obj:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Po' tmpdepfile='$(DEPDIR)/$*.TPo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(COMPILE) -c `cygpath -w $<`
+@am__fastdepCC_TRUE@	if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ `$(CYGPATH_W) '$<'`; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(COMPILE) -c `$(CYGPATH_W) '$<'`
 
 .c.lo:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Plo' tmpdepfile='$(DEPDIR)/$*.TPlo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(LTCOMPILE) -c -o $@ `test -f '$<' || echo '$(srcdir)/'`$<
-CCDEPMODE = @CCDEPMODE@
+@am__fastdepCC_TRUE@	if $(LTCOMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ $<; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Plo"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(LTCOMPILE) -c -o $@ $<
 
 mostlyclean-libtool:
 	-rm -f *.lo
@@ -359,11 +430,6 @@ distclean-libtool:
 	-rm -f libtool
 uninstall-info-am:
 
-ETAGS = etags
-ETAGSFLAGS =
-
-tags: TAGS
-
 ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
@@ -372,6 +438,7 @@ ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	  $(AWK) '    { files[$$0] = 1; } \
 	       END { for (i in files) print i; }'`; \
 	mkid -fID $$unique
+tags: TAGS
 
 TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
@@ -383,8 +450,24 @@ TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 	  done | \
 	  $(AWK) '    { files[$$0] = 1; } \
 	       END { for (i in files) print i; }'`; \
-	test -z "$(ETAGS_ARGS)$$tags$$unique" \
-	  || $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
+	  test -n "$$unique" || unique=$$empty_fix; \
+	  $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	    $$tags $$unique; \
+	fi
+ctags: CTAGS
+CTAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
+		$(TAGS_FILES) $(LISP)
+	tags=; \
+	here=`pwd`; \
+	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
+	unique=`for i in $$list; do \
+	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
+	  done | \
+	  $(AWK) '    { files[$$0] = 1; } \
+	       END { for (i in files) print i; }'`; \
+	test -z "$(CTAGS_ARGS)$$tags$$unique" \
+	  || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
 	     $$tags $$unique
 
 GTAGS:
@@ -393,19 +476,22 @@ GTAGS:
 	  && gtags -i $(GTAGS_ARGS) $$here
 
 distclean-tags:
-	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH
-DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
-
-top_distdir = ../..
-distdir = $(top_distdir)/$(PACKAGE)-$(VERSION)
+	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
 
 distdir: $(DISTFILES)
-	@list='$(DISTFILES)'; for file in $$list; do \
+	$(mkdir_p) $(distdir)/../../config
+	@srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`; \
+	topsrcdirstrip=`echo "$(top_srcdir)" | sed 's|.|.|g'`; \
+	list='$(DISTFILES)'; for file in $$list; do \
+	  case $$file in \
+	    $(srcdir)/*) file=`echo "$$file" | sed "s|^$$srcdirstrip/||"`;; \
+	    $(top_srcdir)/*) file=`echo "$$file" | sed "s|^$$topsrcdirstrip/|$(top_builddir)/|"`;; \
+	  esac; \
 	  if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
 	  dir=`echo "$$file" | sed -e 's,/[^/]*$$,,'`; \
 	  if test "$$dir" != "$$file" && test "$$dir" != "."; then \
 	    dir="/$$dir"; \
-	    $(mkinstalldirs) "$(distdir)$$dir"; \
+	    $(mkdir_p) "$(distdir)$$dir"; \
 	  else \
 	    dir=''; \
 	  fi; \
@@ -425,9 +511,7 @@ check-am: all-am
 	$(MAKE) $(AM_MAKEFLAGS) check-TESTS
 check: check-am
 all-am: Makefile $(LTLIBRARIES) all-local
-
 installdirs:
-
 install: install-am
 install-exec: install-exec-am
 install-data: install-data-am
@@ -439,7 +523,7 @@ install-am: all-am
 installcheck: installcheck-am
 install-strip:
 	$(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
-	  INSTALL_STRIP_FLAG=-s \
+	  install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
 	  `test -z '$(STRIP)' || \
 	    echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install
 mostlyclean-generic:
@@ -447,7 +531,7 @@ mostlyclean-generic:
 clean-generic:
 
 distclean-generic:
-	-rm -f Makefile $(CONFIG_CLEAN_FILES)
+	-test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
 
 maintainer-clean-generic:
 	@echo "This command is intended for maintainers to use"
@@ -458,14 +542,17 @@ clean-am: clean-checkPROGRAMS clean-generic clean-libtool \
 	clean-noinstLTLIBRARIES mostlyclean-am
 
 distclean: distclean-am
-
-distclean-am: clean-am distclean-compile distclean-depend \
-	distclean-generic distclean-libtool distclean-tags
+	-rm -rf ./$(DEPDIR)
+	-rm -f Makefile
+distclean-am: clean-am distclean-compile distclean-generic \
+	distclean-libtool distclean-tags
 
 dvi: dvi-am
 
 dvi-am:
 
+html: html-am
+
 info: info-am
 
 info-am:
@@ -481,7 +568,8 @@ install-man:
 installcheck-am:
 
 maintainer-clean: maintainer-clean-am
-
+	-rm -rf ./$(DEPDIR)
+	-rm -f Makefile
 maintainer-clean-am: distclean-am maintainer-clean-generic
 
 mostlyclean: mostlyclean-am
@@ -489,18 +577,26 @@ mostlyclean: mostlyclean-am
 mostlyclean-am: mostlyclean-compile mostlyclean-generic \
 	mostlyclean-libtool
 
+pdf: pdf-am
+
+pdf-am:
+
+ps: ps-am
+
+ps-am:
+
 uninstall-am: uninstall-info-am
 
-.PHONY: GTAGS all all-am all-local check check-TESTS check-am clean \
-	clean-checkPROGRAMS clean-generic clean-libtool \
-	clean-noinstLTLIBRARIES distclean distclean-compile \
-	distclean-depend distclean-generic distclean-libtool \
-	distclean-tags distdir dvi dvi-am info info-am install \
-	install-am install-data install-data-am install-exec \
-	install-exec-am install-info install-info-am install-man \
-	install-strip installcheck installcheck-am installdirs \
-	maintainer-clean maintainer-clean-generic mostlyclean \
-	mostlyclean-compile mostlyclean-generic mostlyclean-libtool \
+.PHONY: CTAGS GTAGS all all-am all-local check check-TESTS check-am \
+	clean clean-checkPROGRAMS clean-generic clean-libtool \
+	clean-noinstLTLIBRARIES ctags distclean distclean-compile \
+	distclean-generic distclean-libtool distclean-tags distdir dvi \
+	dvi-am html html-am info info-am install install-am \
+	install-data install-data-am install-exec install-exec-am \
+	install-info install-info-am install-man install-strip \
+	installcheck installcheck-am installdirs maintainer-clean \
+	maintainer-clean-generic mostlyclean mostlyclean-compile \
+	mostlyclean-generic mostlyclean-libtool pdf pdf-am ps ps-am \
 	tags uninstall uninstall-am uninstall-info-am
 
 
diff --git a/tools/misc/Makefile.in b/tools/misc/Makefile.in
index 18721cb..5c0ff2e 100644
--- a/tools/misc/Makefile.in
+++ b/tools/misc/Makefile.in
@@ -1,8 +1,8 @@
-# Makefile.in generated by automake 1.6.3 from Makefile.am.
+# Makefile.in generated by automake 1.9.5 from Makefile.am.
 # @configure_input@
 
-# Copyright 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002
-# Free Software Foundation, Inc.
+# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
+# 2003, 2004, 2005  Free Software Foundation, Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -29,93 +29,143 @@
 #
 # HDF5 Library Makefile(.in)
 #
-SHELL = @SHELL@
+
+
+SOURCES = h5debug.c h5repart.c pdb2hdf5.c
 
 srcdir = @srcdir@
 top_srcdir = @top_srcdir@
 VPATH = @srcdir@
-prefix = @prefix@
-exec_prefix = @exec_prefix@
-
-bindir = @bindir@
-sbindir = @sbindir@
-libexecdir = @libexecdir@
-datadir = @datadir@
-sysconfdir = @sysconfdir@
-sharedstatedir = @sharedstatedir@
-localstatedir = @localstatedir@
-libdir = @libdir@
-infodir = @infodir@
-mandir = @mandir@
-oldincludedir = /usr/include
 pkgdatadir = $(datadir)/@PACKAGE@
 pkglibdir = $(libdir)/@PACKAGE@
 pkgincludedir = $(includedir)/@PACKAGE@
 top_builddir = ../..
-
 am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
 INSTALL = @INSTALL@
-INSTALL_PROGRAM = @INSTALL_PROGRAM@
-INSTALL_DATA = @INSTALL_DATA@
 install_sh_DATA = $(install_sh) -c -m 644
 install_sh_PROGRAM = $(install_sh) -c
 install_sh_SCRIPT = $(install_sh) -c
-INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_HEADER = $(INSTALL_DATA)
-transform = @program_transform_name@
+transform = $(program_transform_name)
 NORMAL_INSTALL = :
 PRE_INSTALL = :
 POST_INSTALL = :
 NORMAL_UNINSTALL = :
 PRE_UNINSTALL = :
 POST_UNINSTALL = :
-host_alias = @host_alias@
+build_triplet = @build@
 host_triplet = @host@
-
-EXEEXT = @EXEEXT@
-OBJEXT = @OBJEXT@
-PATH_SEPARATOR = @PATH_SEPARATOR@
-
-# Install directories that automake doesn't know about
-includedir = $(exec_prefix)/include
-
+DIST_COMMON = $(srcdir)/Makefile.am $(srcdir)/Makefile.in \
+	$(srcdir)/h5cc.in $(top_srcdir)/config/commence.am \
+	$(top_srcdir)/config/conclude.am
+bin_PROGRAMS = h5debug$(EXEEXT) h5repart$(EXEEXT) $(am__EXEEXT_1)
+subdir = tools/misc
+ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
+am__aclocal_m4_deps = $(top_srcdir)/configure.in
+am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+	$(ACLOCAL_M4)
+mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
+CONFIG_HEADER = $(top_builddir)/src/H5config.h
+CONFIG_CLEAN_FILES = h5cc
+@BUILD_PDB2HDF_CONDITIONAL_TRUE@am__EXEEXT_1 = pdb2hdf5$(EXEEXT)
+am__installdirs = "$(DESTDIR)$(bindir)" "$(DESTDIR)$(bindir)"
+binPROGRAMS_INSTALL = $(INSTALL_PROGRAM)
+PROGRAMS = $(bin_PROGRAMS)
+h5debug_SOURCES = h5debug.c
+h5debug_OBJECTS = h5debug.$(OBJEXT)
+h5debug_LDADD = $(LDADD)
+am__DEPENDENCIES_1 = $(top_builddir)/src/libhdf5.la
+am__DEPENDENCIES_2 = $(top_builddir)/tools/lib/libh5tools.la
+h5debug_DEPENDENCIES = $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_2)
+h5repart_SOURCES = h5repart.c
+h5repart_OBJECTS = h5repart.$(OBJEXT)
+h5repart_LDADD = $(LDADD)
+h5repart_DEPENDENCIES = $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_2)
+pdb2hdf5_SOURCES = pdb2hdf5.c
+pdb2hdf5_OBJECTS = pdb2hdf5.$(OBJEXT)
+pdb2hdf5_LDADD = $(LDADD)
+pdb2hdf5_DEPENDENCIES = $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_2)
+binSCRIPT_INSTALL = $(INSTALL_SCRIPT)
+SCRIPTS = $(bin_SCRIPTS)
+DEFAULT_INCLUDES = -I. -I$(srcdir) -I$(top_builddir)/src
+depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
+am__depfiles_maybe = depfiles
+COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
+	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
+LTCOMPILE = $(LIBTOOL) --tag=CC --mode=compile $(CC) $(DEFS) \
+	$(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
+	$(AM_CFLAGS) $(CFLAGS)
+CCLD = $(CC)
+LINK = $(LIBTOOL) --tag=CC --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
+	$(AM_LDFLAGS) $(LDFLAGS) -o $@
+SOURCES = h5debug.c h5repart.c pdb2hdf5.c
+DIST_SOURCES = h5debug.c h5repart.c pdb2hdf5.c
+ETAGS = etags
+CTAGS = ctags
+DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
 
 # Set the paths for autotools to be correct on heping.
 # Ideally, these tools should never be needed during the build.
 ACLOCAL = /usr/bin/aclocal
-AUTOCONF = /usr/local/autoconf-2.59/bin/autoconf
-AUTOMAKE = /usr/bin/automake
-AUTOHEADER = /usr/local/autoconf-2.59/bin/autoheader
 ADD_PARALLEL_FILES = @ADD_PARALLEL_FILES@
+AMDEP_FALSE = @AMDEP_FALSE@
+AMDEP_TRUE = @AMDEP_TRUE@
 AMTAR = @AMTAR@
 AM_MAKEFLAGS = @AM_MAKEFLAGS@
 AR = @AR@
-AS = @AS@
+AUTOCONF = /usr/local/autoconf-2.59/bin/autoconf
+AUTOHEADER = /usr/local/autoconf-2.59/bin/autoheader
+AUTOMAKE = /usr/bin/automake
 AWK = @AWK@
+BUILD_CXX_CONDITIONAL_FALSE = @BUILD_CXX_CONDITIONAL_FALSE@
+BUILD_CXX_CONDITIONAL_TRUE = @BUILD_CXX_CONDITIONAL_TRUE@
+BUILD_FORTRAN_CONDITIONAL_FALSE = @BUILD_FORTRAN_CONDITIONAL_FALSE@
+BUILD_FORTRAN_CONDITIONAL_TRUE = @BUILD_FORTRAN_CONDITIONAL_TRUE@
+BUILD_HDF5_HL_CONDITIONAL_FALSE = @BUILD_HDF5_HL_CONDITIONAL_FALSE@
+BUILD_HDF5_HL_CONDITIONAL_TRUE = @BUILD_HDF5_HL_CONDITIONAL_TRUE@
+BUILD_PABLO_CONDITIONAL_FALSE = @BUILD_PABLO_CONDITIONAL_FALSE@
+BUILD_PABLO_CONDITIONAL_TRUE = @BUILD_PABLO_CONDITIONAL_TRUE@
+BUILD_PARALLEL_CONDITIONAL_FALSE = @BUILD_PARALLEL_CONDITIONAL_FALSE@
+BUILD_PARALLEL_CONDITIONAL_TRUE = @BUILD_PARALLEL_CONDITIONAL_TRUE@
 BUILD_PDB2HDF = @BUILD_PDB2HDF@
+BUILD_PDB2HDF_CONDITIONAL_FALSE = @BUILD_PDB2HDF_CONDITIONAL_FALSE@
+BUILD_PDB2HDF_CONDITIONAL_TRUE = @BUILD_PDB2HDF_CONDITIONAL_TRUE@
 BYTESEX = @BYTESEX@
 CC = @CC@
+CCDEPMODE = @CCDEPMODE@
 CC_VERSION = @CC_VERSION@
+CFLAGS = @CFLAGS@
 CONFIG_DATE = @CONFIG_DATE@
 CONFIG_MODE = @CONFIG_MODE@
 CONFIG_USER = @CONFIG_USER@
+CPP = @CPP@
 CPPFLAGS = @CPPFLAGS@
 CXX = @CXX@
 CXXCPP = @CXXCPP@
+CXXDEPMODE = @CXXDEPMODE@
+CXXFLAGS = @CXXFLAGS@
+CYGPATH_W = @CYGPATH_W@
 DEBUG_PKG = @DEBUG_PKG@
+DEFS = @DEFS@
 DEPDIR = @DEPDIR@
-DLLTOOL = @DLLTOOL@
 DYNAMIC_DIRS = @DYNAMIC_DIRS@
 ECHO = @ECHO@
+ECHO_C = @ECHO_C@
+ECHO_N = @ECHO_N@
+ECHO_T = @ECHO_T@
 EGREP = @EGREP@
+EXEEXT = @EXEEXT@
 F77 = @F77@
+
+# Make sure that these variables are exported to the Makefiles
+F9XMODEXT = @F9XMODEXT@
+F9XMODFLAG = @F9XMODFLAG@
 F9XSUFFIXFLAG = @F9XSUFFIXFLAG@
 FC = @FC@
+FCFLAGS = @FCFLAGS@
 FFLAGS = @FFLAGS@
 FILTERS = @FILTERS@
 FSEARCH_DIRS = @FSEARCH_DIRS@
-GCJ = @GCJ@
-GCJFLAGS = @GCJFLAGS@
 H5_VERSION = @H5_VERSION@
 HADDR_T = @HADDR_T@
 HDF5_INTERFACES = @HDF5_INTERFACES@
@@ -125,21 +175,36 @@ HL_FOR = @HL_FOR@
 HSIZET = @HSIZET@
 HSIZE_T = @HSIZE_T@
 HSSIZE_T = @HSSIZE_T@
+INSTALL_DATA = @INSTALL_DATA@
+INSTALL_PROGRAM = @INSTALL_PROGRAM@
+INSTALL_SCRIPT = @INSTALL_SCRIPT@
 INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
 INSTRUMENT_LIBRARY = @INSTRUMENT_LIBRARY@
+LDFLAGS = @LDFLAGS@
+LIBOBJS = @LIBOBJS@
+LIBS = @LIBS@
 LIBTOOL = @LIBTOOL@
 LN_S = @LN_S@
+LTLIBOBJS = @LTLIBOBJS@
 LT_STATIC_EXEC = @LT_STATIC_EXEC@
 MAINT = @MAINT@
+MAINTAINER_MODE_FALSE = @MAINTAINER_MODE_FALSE@
+MAINTAINER_MODE_TRUE = @MAINTAINER_MODE_TRUE@
+MAKEINFO = @MAKEINFO@
 MPE = @MPE@
-OBJDUMP = @OBJDUMP@
 OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@
+OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
+PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@
+PACKAGE_NAME = @PACKAGE_NAME@
+PACKAGE_STRING = @PACKAGE_STRING@
+PACKAGE_TARNAME = @PACKAGE_TARNAME@
+PACKAGE_VERSION = @PACKAGE_VERSION@
 PARALLEL = @PARALLEL@
+PATH_SEPARATOR = @PATH_SEPARATOR@
 PERL = @PERL@
 PTHREAD = @PTHREAD@
 RANLIB = @RANLIB@
-RC = @RC@
 ROOT = @ROOT@
 RUNPARALLEL = @RUNPARALLEL@
 RUNSERIAL = @RUNSERIAL@
@@ -147,6 +212,8 @@ R_INTEGER = @R_INTEGER@
 R_LARGE = @R_LARGE@
 SEARCH = @SEARCH@
 SETX = @SETX@
+SET_MAKE = @SET_MAKE@
+SHELL = @SHELL@
 SIZE_T = @SIZE_T@
 SRB = @SRB@
 STATIC_SHARED = @STATIC_SHARED@
@@ -161,9 +228,52 @@ USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@
 USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@
 USE_FILTER_SZIP = @USE_FILTER_SZIP@
 VERSION = @VERSION@
+ac_ct_AR = @ac_ct_AR@
+ac_ct_CC = @ac_ct_CC@
+ac_ct_CXX = @ac_ct_CXX@
+ac_ct_F77 = @ac_ct_F77@
+ac_ct_FC = @ac_ct_FC@
+ac_ct_RANLIB = @ac_ct_RANLIB@
+ac_ct_STRIP = @ac_ct_STRIP@
+am__fastdepCC_FALSE = @am__fastdepCC_FALSE@
+am__fastdepCC_TRUE = @am__fastdepCC_TRUE@
+am__fastdepCXX_FALSE = @am__fastdepCXX_FALSE@
+am__fastdepCXX_TRUE = @am__fastdepCXX_TRUE@
 am__include = @am__include@
+am__leading_dot = @am__leading_dot@
 am__quote = @am__quote@
+am__tar = @am__tar@
+am__untar = @am__untar@
+bindir = @bindir@
+build = @build@
+build_alias = @build_alias@
+build_cpu = @build_cpu@
+build_os = @build_os@
+build_vendor = @build_vendor@
+datadir = @datadir@
+exec_prefix = @exec_prefix@
+host = @host@
+host_alias = @host_alias@
+host_cpu = @host_cpu@
+host_os = @host_os@
+host_vendor = @host_vendor@
+
+# Install directories that automake doesn't know about
+includedir = $(exec_prefix)/include
+infodir = @infodir@
 install_sh = @install_sh@
+libdir = @libdir@
+libexecdir = @libexecdir@
+localstatedir = @localstatedir@
+mandir = @mandir@
+mkdir_p = @mkdir_p@
+oldincludedir = @oldincludedir@
+prefix = @prefix@
+program_transform_name = @program_transform_name@
+sbindir = @sbindir@
+sharedstatedir = @sharedstatedir@
+sysconfdir = @sysconfdir@
+target_alias = @target_alias@
 
 # Shell commands used in Makefiles
 RM = rm -f
@@ -186,18 +296,11 @@ H5CC_PP = $(bindir)/h5pcc
 H5FC = $(bindir)/h5fc
 H5FC_PP = $(bindir)/h5pfc
 
-# Make sure that these variables are exported to the Makefiles
-F9XMODEXT = @F9XMODEXT@
-F9XMODFLAG = @F9XMODFLAG@
-
 # Include src directory
 INCLUDES = -I$(top_srcdir)/src
 
 # Build pdb2hdf5 if LLNL's PDB is present (checked in configure)
 @BUILD_PDB2HDF_CONDITIONAL_TRUE@PDB2HDF = pdb2hdf5
-
-# These are our main targets, the tools
-bin_PROGRAMS = h5debug h5repart $(PDB2HDF)
 bin_SCRIPTS = h5redeploy
 
 # Tell automake to clean h5redeploy script
@@ -208,11 +311,11 @@ DISTCLEANFILES = h5cc
 
 # All programs rely on hdf5 library and h5tools library
 LDADD = $(LIBHDF5) $(LIBH5TOOLS)
+@BUILD_PARALLEL_CONDITIONAL_FALSE@H5CC_NAME = h5cc
 
 # h5cc needs custom install and uninstall rules, since it may be
 # named h5pcc if hdf5 is being built in parallel mode.
 @BUILD_PARALLEL_CONDITIONAL_TRUE@H5CC_NAME = h5pcc
-@BUILD_PARALLEL_CONDITIONAL_FALSE@H5CC_NAME = h5cc
 
 # Automake needs to be taught how to build lib, progs, and tests targets.
 # These will be filled in automatically for the most part (e.g.,
@@ -226,81 +329,52 @@ PROGS = $(bin_PROGRAMS) $(bin_SCRIPTS) $(noinst_PROGRAMS) $(noinst_SCRIPTS)   \
         $(EXTRA_PROG)
 
 TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST) 
-subdir = tools/misc
-mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
-CONFIG_HEADER = $(top_builddir)/src/H5config.h
-CONFIG_CLEAN_FILES = h5cc
-@BUILD_PDB2HDF_CONDITIONAL_TRUE@bin_PROGRAMS = h5debug$(EXEEXT) \
-@BUILD_PDB2HDF_CONDITIONAL_TRUE@	h5repart$(EXEEXT) \
-@BUILD_PDB2HDF_CONDITIONAL_TRUE@	pdb2hdf5$(EXEEXT)
-@BUILD_PDB2HDF_CONDITIONAL_FALSE@bin_PROGRAMS = h5debug$(EXEEXT) \
-@BUILD_PDB2HDF_CONDITIONAL_FALSE@	h5repart$(EXEEXT)
-PROGRAMS = $(bin_PROGRAMS)
-
-h5debug_SOURCES = h5debug.c
-h5debug_OBJECTS = h5debug.$(OBJEXT)
-h5debug_LDADD = $(LDADD)
-h5debug_DEPENDENCIES = $(top_builddir)/src/libhdf5.la \
-	$(top_builddir)/tools/lib/libh5tools.la
-h5debug_LDFLAGS =
-h5repart_SOURCES = h5repart.c
-h5repart_OBJECTS = h5repart.$(OBJEXT)
-h5repart_LDADD = $(LDADD)
-h5repart_DEPENDENCIES = $(top_builddir)/src/libhdf5.la \
-	$(top_builddir)/tools/lib/libh5tools.la
-h5repart_LDFLAGS =
-pdb2hdf5_SOURCES = pdb2hdf5.c
-pdb2hdf5_OBJECTS = pdb2hdf5.$(OBJEXT)
-pdb2hdf5_LDADD = $(LDADD)
-pdb2hdf5_DEPENDENCIES = $(top_builddir)/src/libhdf5.la \
-	$(top_builddir)/tools/lib/libh5tools.la
-pdb2hdf5_LDFLAGS =
-SCRIPTS = $(bin_SCRIPTS)
-
-
-DEFS = @DEFS@
-DEFAULT_INCLUDES =  -I. -I$(srcdir) -I$(top_builddir)/src
-LDFLAGS = @LDFLAGS@
-LIBS = @LIBS@
-depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
-am__depfiles_maybe = depfiles
-@AMDEP_TRUE@DEP_FILES = ./$(DEPDIR)/h5debug.Po ./$(DEPDIR)/h5repart.Po \
-@AMDEP_TRUE@	./$(DEPDIR)/pdb2hdf5.Po
-COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
-	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
-LTCOMPILE = $(LIBTOOL) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) \
-	$(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
-CCLD = $(CC)
-LINK = $(LIBTOOL) --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
-	$(AM_LDFLAGS) $(LDFLAGS) -o $@
-CFLAGS = @CFLAGS@
-DIST_SOURCES = h5debug.c h5repart.c pdb2hdf5.c
-DIST_COMMON = Makefile.am Makefile.in h5cc.in
-SOURCES = h5debug.c h5repart.c pdb2hdf5.c
-
 all: all-am
 
 .SUFFIXES:
 .SUFFIXES: .c .lo .o .obj
-$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(top_srcdir)/configure.in $(ACLOCAL_M4)
+$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(am__configure_deps)
+	@for dep in $?; do \
+	  case '$(am__configure_deps)' in \
+	    *$$dep*) \
+	      cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh \
+		&& exit 0; \
+	      exit 1;; \
+	  esac; \
+	done; \
+	echo ' cd $(top_srcdir) && $(AUTOMAKE) --foreign  tools/misc/Makefile'; \
 	cd $(top_srcdir) && \
 	  $(AUTOMAKE) --foreign  tools/misc/Makefile
-Makefile: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.in  $(top_builddir)/config.status
-	cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)
-h5cc: $(top_builddir)/config.status h5cc.in
+.PRECIOUS: Makefile
+Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+	@case '$?' in \
+	  *config.status*) \
+	    cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh;; \
+	  *) \
+	    echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)'; \
+	    cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe);; \
+	esac;
+
+$(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+
+$(top_srcdir)/configure: @MAINTAINER_MODE_TRUE@ $(am__configure_deps)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+$(ACLOCAL_M4): @MAINTAINER_MODE_TRUE@ $(am__aclocal_m4_deps)
+	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
+h5cc: $(top_builddir)/config.status $(srcdir)/h5cc.in
 	cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@
-binPROGRAMS_INSTALL = $(INSTALL_PROGRAM)
 install-binPROGRAMS: $(bin_PROGRAMS)
 	@$(NORMAL_INSTALL)
-	$(mkinstalldirs) $(DESTDIR)$(bindir)
+	test -z "$(bindir)" || $(mkdir_p) "$(DESTDIR)$(bindir)"
 	@list='$(bin_PROGRAMS)'; for p in $$list; do \
 	  p1=`echo $$p|sed 's/$(EXEEXT)$$//'`; \
 	  if test -f $$p \
 	     || test -f $$p1 \
 	  ; then \
 	    f=`echo "$$p1" | sed 's,^.*/,,;$(transform);s/$$/$(EXEEXT)/'`; \
-	   echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) $$p $(DESTDIR)$(bindir)/$$f"; \
-	   $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) $$p $(DESTDIR)$(bindir)/$$f; \
+	   echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) '$$p' '$(DESTDIR)$(bindir)/$$f'"; \
+	   $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) "$$p" "$(DESTDIR)$(bindir)/$$f" || exit 1; \
 	  else :; fi; \
 	done
 
@@ -308,8 +382,8 @@ uninstall-binPROGRAMS:
 	@$(NORMAL_UNINSTALL)
 	@list='$(bin_PROGRAMS)'; for p in $$list; do \
 	  f=`echo "$$p" | sed 's,^.*/,,;s/$(EXEEXT)$$//;$(transform);s/$$/$(EXEEXT)/'`; \
-	  echo " rm -f $(DESTDIR)$(bindir)/$$f"; \
-	  rm -f $(DESTDIR)$(bindir)/$$f; \
+	  echo " rm -f '$(DESTDIR)$(bindir)/$$f'"; \
+	  rm -f "$(DESTDIR)$(bindir)/$$f"; \
 	done
 
 clean-binPROGRAMS:
@@ -327,16 +401,15 @@ h5repart$(EXEEXT): $(h5repart_OBJECTS) $(h5repart_DEPENDENCIES)
 pdb2hdf5$(EXEEXT): $(pdb2hdf5_OBJECTS) $(pdb2hdf5_DEPENDENCIES) 
 	@rm -f pdb2hdf5$(EXEEXT)
 	$(LINK) $(pdb2hdf5_LDFLAGS) $(pdb2hdf5_OBJECTS) $(pdb2hdf5_LDADD) $(LIBS)
-binSCRIPT_INSTALL = $(INSTALL_SCRIPT)
 install-binSCRIPTS: $(bin_SCRIPTS)
 	@$(NORMAL_INSTALL)
-	$(mkinstalldirs) $(DESTDIR)$(bindir)
+	test -z "$(bindir)" || $(mkdir_p) "$(DESTDIR)$(bindir)"
 	@list='$(bin_SCRIPTS)'; for p in $$list; do \
 	  if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \
 	  if test -f $$d$$p; then \
 	    f=`echo "$$p" | sed 's|^.*/||;$(transform)'`; \
-	    echo " $(binSCRIPT_INSTALL) $$d$$p $(DESTDIR)$(bindir)/$$f"; \
-	    $(binSCRIPT_INSTALL) $$d$$p $(DESTDIR)$(bindir)/$$f; \
+	    echo " $(binSCRIPT_INSTALL) '$$d$$p' '$(DESTDIR)$(bindir)/$$f'"; \
+	    $(binSCRIPT_INSTALL) "$$d$$p" "$(DESTDIR)$(bindir)/$$f"; \
 	  else :; fi; \
 	done
 
@@ -344,12 +417,12 @@ uninstall-binSCRIPTS:
 	@$(NORMAL_UNINSTALL)
 	@list='$(bin_SCRIPTS)'; for p in $$list; do \
 	  f=`echo "$$p" | sed 's|^.*/||;$(transform)'`; \
-	  echo " rm -f $(DESTDIR)$(bindir)/$$f"; \
-	  rm -f $(DESTDIR)$(bindir)/$$f; \
+	  echo " rm -f '$(DESTDIR)$(bindir)/$$f'"; \
+	  rm -f "$(DESTDIR)$(bindir)/$$f"; \
 	done
 
 mostlyclean-compile:
-	-rm -f *.$(OBJEXT) core *.core
+	-rm -f *.$(OBJEXT)
 
 distclean-compile:
 	-rm -f *.tab.c
@@ -358,27 +431,26 @@ distclean-compile:
 @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/h5repart.Po@am__quote@
 @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/pdb2hdf5.Po@am__quote@
 
-distclean-depend:
-	-rm -rf ./$(DEPDIR)
-
 .c.o:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Po' tmpdepfile='$(DEPDIR)/$*.TPo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(COMPILE) -c `test -f '$<' || echo '$(srcdir)/'`$<
+@am__fastdepCC_TRUE@	if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ $<; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(COMPILE) -c $<
 
 .c.obj:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Po' tmpdepfile='$(DEPDIR)/$*.TPo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(COMPILE) -c `cygpath -w $<`
+@am__fastdepCC_TRUE@	if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ `$(CYGPATH_W) '$<'`; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(COMPILE) -c `$(CYGPATH_W) '$<'`
 
 .c.lo:
-@AMDEP_TRUE@	source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
-@AMDEP_TRUE@	depfile='$(DEPDIR)/$*.Plo' tmpdepfile='$(DEPDIR)/$*.TPlo' @AMDEPBACKSLASH@
-@AMDEP_TRUE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-	$(LTCOMPILE) -c -o $@ `test -f '$<' || echo '$(srcdir)/'`$<
-CCDEPMODE = @CCDEPMODE@
+@am__fastdepCC_TRUE@	if $(LTCOMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" -c -o $@ $<; \
+@am__fastdepCC_TRUE@	then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Plo"; else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; fi
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(LTCOMPILE) -c -o $@ $<
 
 mostlyclean-libtool:
 	-rm -f *.lo
@@ -390,11 +462,6 @@ distclean-libtool:
 	-rm -f libtool
 uninstall-info-am:
 
-ETAGS = etags
-ETAGSFLAGS =
-
-tags: TAGS
-
 ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \
 	unique=`for i in $$list; do \
@@ -403,6 +470,7 @@ ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
 	  $(AWK) '    { files[$$0] = 1; } \
 	       END { for (i in files) print i; }'`; \
 	mkid -fID $$unique
+tags: TAGS
 
 TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 		$(TAGS_FILES) $(LISP)
@@ -414,8 +482,24 @@ TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
 	  done | \
 	  $(AWK) '    { files[$$0] = 1; } \
 	       END { for (i in files) print i; }'`; \
-	test -z "$(ETAGS_ARGS)$$tags$$unique" \
-	  || $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \
+	  test -n "$$unique" || unique=$$empty_fix; \
+	  $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
+	    $$tags $$unique; \
+	fi
+ctags: CTAGS
+CTAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
+		$(TAGS_FILES) $(LISP)
+	tags=; \
+	here=`pwd`; \
+	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
+	unique=`for i in $$list; do \
+	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
+	  done | \
+	  $(AWK) '    { files[$$0] = 1; } \
+	       END { for (i in files) print i; }'`; \
+	test -z "$(CTAGS_ARGS)$$tags$$unique" \
+	  || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
 	     $$tags $$unique
 
 GTAGS:
@@ -424,19 +508,22 @@ GTAGS:
 	  && gtags -i $(GTAGS_ARGS) $$here
 
 distclean-tags:
-	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH
-DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
-
-top_distdir = ../..
-distdir = $(top_distdir)/$(PACKAGE)-$(VERSION)
+	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
 
 distdir: $(DISTFILES)
-	@list='$(DISTFILES)'; for file in $$list; do \
+	$(mkdir_p) $(distdir)/../../config
+	@srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`; \
+	topsrcdirstrip=`echo "$(top_srcdir)" | sed 's|.|.|g'`; \
+	list='$(DISTFILES)'; for file in $$list; do \
+	  case $$file in \
+	    $(srcdir)/*) file=`echo "$$file" | sed "s|^$$srcdirstrip/||"`;; \
+	    $(top_srcdir)/*) file=`echo "$$file" | sed "s|^$$topsrcdirstrip/|$(top_builddir)/|"`;; \
+	  esac; \
 	  if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
 	  dir=`echo "$$file" | sed -e 's,/[^/]*$$,,'`; \
 	  if test "$$dir" != "$$file" && test "$$dir" != "."; then \
 	    dir="/$$dir"; \
-	    $(mkinstalldirs) "$(distdir)$$dir"; \
+	    $(mkdir_p) "$(distdir)$$dir"; \
 	  else \
 	    dir=''; \
 	  fi; \
@@ -455,10 +542,10 @@ check-am: all-am
 	$(MAKE) $(AM_MAKEFLAGS) check-TESTS
 check: check-am
 all-am: Makefile $(PROGRAMS) $(SCRIPTS) all-local
-
 installdirs:
-	$(mkinstalldirs) $(DESTDIR)$(bindir) $(DESTDIR)$(bindir)
-
+	for dir in "$(DESTDIR)$(bindir)" "$(DESTDIR)$(bindir)"; do \
+	  test -z "$$dir" || $(mkdir_p) "$$dir"; \
+	done
 install: install-am
 install-exec: install-exec-am
 install-data: install-data-am
@@ -470,7 +557,7 @@ install-am: all-am
 installcheck: installcheck-am
 install-strip:
 	$(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
-	  INSTALL_STRIP_FLAG=-s \
+	  install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
 	  `test -z '$(STRIP)' || \
 	    echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install
 mostlyclean-generic:
@@ -479,7 +566,7 @@ clean-generic:
 	-test -z "$(CLEANFILES)" || rm -f $(CLEANFILES)
 
 distclean-generic:
-	-rm -f Makefile $(CONFIG_CLEAN_FILES)
+	-test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
 	-test -z "$(DISTCLEANFILES)" || rm -f $(DISTCLEANFILES)
 
 maintainer-clean-generic:
@@ -490,14 +577,17 @@ clean: clean-am
 clean-am: clean-binPROGRAMS clean-generic clean-libtool mostlyclean-am
 
 distclean: distclean-am
-
-distclean-am: clean-am distclean-compile distclean-depend \
-	distclean-generic distclean-libtool distclean-tags
+	-rm -rf ./$(DEPDIR)
+	-rm -f Makefile
+distclean-am: clean-am distclean-compile distclean-generic \
+	distclean-libtool distclean-tags
 
 dvi: dvi-am
 
 dvi-am:
 
+html: html-am
+
 info: info-am
 
 info-am:
@@ -514,7 +604,8 @@ install-man:
 installcheck-am:
 
 maintainer-clean: maintainer-clean-am
-
+	-rm -rf ./$(DEPDIR)
+	-rm -f Makefile
 maintainer-clean-am: distclean-am maintainer-clean-generic
 
 mostlyclean: mostlyclean-am
@@ -522,22 +613,30 @@ mostlyclean: mostlyclean-am
 mostlyclean-am: mostlyclean-compile mostlyclean-generic \
 	mostlyclean-libtool
 
+pdf: pdf-am
+
+pdf-am:
+
+ps: ps-am
+
+ps-am:
+
 uninstall-am: uninstall-binPROGRAMS uninstall-binSCRIPTS \
 	uninstall-info-am uninstall-local
 
-.PHONY: GTAGS all all-am all-local check check-TESTS check-am clean \
-	clean-binPROGRAMS clean-generic clean-libtool distclean \
-	distclean-compile distclean-depend distclean-generic \
-	distclean-libtool distclean-tags distdir dvi dvi-am info \
-	info-am install install-am install-binPROGRAMS \
+.PHONY: CTAGS GTAGS all all-am all-local check check-TESTS check-am \
+	clean clean-binPROGRAMS clean-generic clean-libtool ctags \
+	distclean distclean-compile distclean-generic \
+	distclean-libtool distclean-tags distdir dvi dvi-am html \
+	html-am info info-am install install-am install-binPROGRAMS \
 	install-binSCRIPTS install-data install-data-am install-exec \
-	install-exec-am install-exec-local install-info install-info-am \
-	install-man install-strip installcheck installcheck-am \
-	installdirs maintainer-clean maintainer-clean-generic \
-	mostlyclean mostlyclean-compile mostlyclean-generic \
-	mostlyclean-libtool tags uninstall uninstall-am \
-	uninstall-binPROGRAMS uninstall-binSCRIPTS uninstall-info-am \
-	uninstall-local
+	install-exec-am install-exec-local install-info \
+	install-info-am install-man install-strip installcheck \
+	installcheck-am installdirs maintainer-clean \
+	maintainer-clean-generic mostlyclean mostlyclean-compile \
+	mostlyclean-generic mostlyclean-libtool pdf pdf-am ps ps-am \
+	tags uninstall uninstall-am uninstall-binPROGRAMS \
+	uninstall-binSCRIPTS uninstall-info-am uninstall-local
 
 
 install-exec-local:
author	James Laird <jlaird@hdfgroup.org>	2005-03-07 17:57:27 (GMT)
committer	James Laird <jlaird@hdfgroup.org>	2005-03-07 17:57:27 (GMT)
commit	25df1908bc0430994cecc9f1415838f42fe0c816 (patch)
tree	bce2777e087cc7d547e7b644f908eff72282bb53 /tools
parent	630b2901c53c66c837e39babe9da0c20020e5d4d (diff)
download	hdf5-25df1908bc0430994cecc9f1415838f42fe0c816.zip hdf5-25df1908bc0430994cecc9f1415838f42fe0c816.tar.gz hdf5-25df1908bc0430994cecc9f1415838f42fe0c816.tar.bz2