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author | David Young <dyoung@hdfgroup.org> | 2020-09-03 21:13:47 (GMT) |
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committer | David Young <dyoung@hdfgroup.org> | 2020-09-03 21:13:47 (GMT) |
commit | d85cd245d29d72990ded9fdf60a2b849a85b1912 (patch) | |
tree | 83aaf2f0b9acc06c1d69af4c843fa23927822efb /tools | |
parent | 651facc1446c36e6d77cc328682dac397bae27e3 (diff) | |
parent | b3a89155b986bca9c436d4ff6c229a68ac23f1ef (diff) | |
download | hdf5-d85cd245d29d72990ded9fdf60a2b849a85b1912.zip hdf5-d85cd245d29d72990ded9fdf60a2b849a85b1912.tar.gz hdf5-d85cd245d29d72990ded9fdf60a2b849a85b1912.tar.bz2 |
Merge remote-tracking branch 'hdffv/develop' into rebased-fprintf-experiment
Diffstat (limited to 'tools')
73 files changed, 2703 insertions, 681 deletions
diff --git a/tools/lib/h5diff_attr.c b/tools/lib/h5diff_attr.c index b7ec2e8..48663e2 100644 --- a/tools/lib/h5diff_attr.c +++ b/tools/lib/h5diff_attr.c @@ -333,7 +333,7 @@ hsize_t diff_attr_data(hid_t attr1_id, hid_t attr2_id, hsize_t dims1[H5S_MAX_RANK]; /* dimensions of dataset */ hsize_t dims2[H5S_MAX_RANK]; /* dimensions of dataset */ hsize_t nfound = 0; - int j; + size_t sz; diff_err_t ret_value = opts->err_stat; H5TOOLS_START_DEBUG(" - errstat:%d", opts->err_stat); @@ -384,19 +384,19 @@ hsize_t diff_attr_data(hid_t attr1_id, hid_t attr2_id, H5TOOLS_DEBUG("attr_names: %s - %s", name1, name2); if (name1) { - j = (int)HDstrlen(name1); - H5TOOLS_DEBUG("attr1_name: %s - %d", name1, j); - if (j > 0) { - opts->obj_name[0] = (char *)HDmalloc((size_t)j + 1); - HDstrncpy(opts->obj_name[0], name1, (size_t)j + 1); + sz = HDstrlen(name1); + H5TOOLS_DEBUG("attr1_name: %s - %d", name1, sz); + if (sz > 0) { + opts->obj_name[0] = (char *)HDmalloc(sz + 1); + HDstrncpy(opts->obj_name[0], name1, sz + 1); } } if (name2) { - j = (int)HDstrlen(name2); - H5TOOLS_DEBUG("attr2_name: %s - %d", name2, j); - if (j > 0) { - opts->obj_name[1] = (char *)HDmalloc((size_t)j + 1); - HDstrncpy(opts->obj_name[1], name2, (size_t)j + 1); + sz = HDstrlen(name2); + H5TOOLS_DEBUG("attr2_name: %s - %d", name2, sz); + if (sz > 0) { + opts->obj_name[1] = (char *)HDmalloc(sz + 1); + HDstrncpy(opts->obj_name[1], name2, sz + 1); } } H5TOOLS_DEBUG("attr_names: %s - %s", opts->obj_name[0], opts->obj_name[1]); @@ -404,6 +404,9 @@ hsize_t diff_attr_data(hid_t attr1_id, hid_t attr2_id, /* pass dims1 and dims2 for maxdims as well since attribute's maxdims * are always same */ if(diff_can_type(ftype1_id, ftype2_id, rank1, rank2, dims1, dims2, dims1, dims2, opts, 0) == 1) { + + int j; + /*----------------------------------------------------------------- * "upgrade" the smaller memory size *------------------------------------------------------------------ @@ -461,22 +464,18 @@ hsize_t diff_attr_data(hid_t attr1_id, hid_t attr2_id, H5TOOLS_DEBUG("attr_names: %s - %s : %s - %s", name1, name2, path1, path2); if (name1) { - j = (int)HDstrlen(name1) + (int)HDstrlen(path1) + 7; - H5TOOLS_DEBUG("attr1_name: %s - %d", name1, j); - if (j > 0) { - opts->obj_name[0] = (char *)HDcalloc((size_t)j + 1, sizeof(char)); - HDsnprintf(opts->obj_name[0], j, "%s of <%s>", name1, path1); - opts->obj_name[0][j] = '\0'; - } + sz = HDstrlen(name1) + HDstrlen(path1) + 7; + H5TOOLS_DEBUG("attr1_name: %s - %d", name1, sz); + opts->obj_name[0] = (char *)HDcalloc(sz + 1, sizeof(char)); + HDsnprintf(opts->obj_name[0], sz, "%s of <%s>", name1, path1); + opts->obj_name[0][sz] = '\0'; } if (name2) { - j = (int)HDstrlen(name2) + (int)HDstrlen(path2) + 7; - H5TOOLS_DEBUG("attr2_name: %s - %d", name2, j); - if (j > 0) { - opts->obj_name[1] = (char *)HDcalloc((size_t)j + 1, sizeof(char)); - HDsnprintf(opts->obj_name[1], j, "%s of <%s>", name2, path2); - opts->obj_name[1][j] = '\0'; - } + sz = HDstrlen(name2) + HDstrlen(path2) + 7; + H5TOOLS_DEBUG("attr2_name: %s - %d", name2, sz); + opts->obj_name[1] = (char *)HDcalloc(sz + 1, sizeof(char)); + HDsnprintf(opts->obj_name[1], sz, "%s of <%s>", name2, path2); + opts->obj_name[1][sz] = '\0'; } /*--------------------------------------------------------------------- diff --git a/tools/lib/h5tools.h b/tools/lib/h5tools.h index 152ec1a..7d3f40a 100644 --- a/tools/lib/h5tools.h +++ b/tools/lib/h5tools.h @@ -12,7 +12,7 @@ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* - * Programmer: Robb Matzke <matzke@llnl.gov> + * Programmer: Robb Matzke * Thursday, July 23, 1998 * * Purpose: Support functions for the various tools. diff --git a/tools/lib/h5tools_str.h b/tools/lib/h5tools_str.h index 074e86d..65446ee 100644 --- a/tools/lib/h5tools_str.h +++ b/tools/lib/h5tools_str.h @@ -12,7 +12,7 @@ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* - * Programmer: Bill Wendling <wendling@ncsa.uiuc.edu> + * Programmer: Bill Wendling * Monday, 19. February 2001 */ #ifndef H5TOOLS_STR_H__ diff --git a/tools/lib/h5tools_utils.c b/tools/lib/h5tools_utils.c index 1a1c2db..6167dd9 100644 --- a/tools/lib/h5tools_utils.c +++ b/tools/lib/h5tools_utils.c @@ -901,7 +901,7 @@ tmpfile(void) * link_info->trg_path must be freed out of this function *-------------------------------------------------------------------------*/ int -H5tools_get_symlink_info(hid_t file_id, const char * linkpath, h5tool_link_info_t *link_info, hbool_t get_obj_type) +H5tools_get_symlink_info(hid_t file_id, const char *linkpath, h5tool_link_info_t *link_info, hbool_t get_obj_type) { htri_t l_ret; H5O_info2_t trg_oinfo; diff --git a/tools/lib/h5tools_utils.h b/tools/lib/h5tools_utils.h index 42144cc..07069cc 100644 --- a/tools/lib/h5tools_utils.h +++ b/tools/lib/h5tools_utils.h @@ -12,7 +12,7 @@ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* - * Programmer: Bill Wendling <wendling@ncsa.uiuc.edu> + * Programmer: Bill Wendling * Tuesday, 6. March 2001 * * Purpose: Support functions for the various tools. diff --git a/tools/libtest/h5tools_test_utils.c b/tools/libtest/h5tools_test_utils.c index 12360a7..244fd43 100644 --- a/tools/libtest/h5tools_test_utils.c +++ b/tools/libtest/h5tools_test_utils.c @@ -1003,6 +1003,7 @@ test_set_configured_fapl(void) hid_t fapl_id = H5I_INVALID_HID; other_fa_t wrong_fa = {0x432, 0xf82, 0x9093}; +#ifdef H5_HAVE_ROS3_VFD H5FD_ros3_fapl_t ros3_anon_fa = {1, FALSE, "", "", ""}; H5FD_ros3_fapl_t ros3_auth_fa = { 1, /* fapl version */ @@ -1011,6 +1012,8 @@ test_set_configured_fapl(void) "12345677890abcdef", /* simulate access key ID */ "oiwnerwe9u0234nJw0-aoj+dsf", /* simulate secret key */ }; +#endif /* H5_HAVE_ROS3_VFD */ +#ifdef H5_HAVE_LIBHDFS H5FD_hdfs_fapl_t hdfs_fa = { 1, /* fapl version */ "", /* namenode name */ @@ -1019,6 +1022,7 @@ test_set_configured_fapl(void) "", /* user name */ 2048, /* stream buffer size */ }; +#endif /* H5_HAVE_LIBHDFS */ unsigned n_cases = 7; /* number of common testcases */ testcase cases[] = { { "(common) should fail: no fapl id", diff --git a/tools/src/h5copy/h5copy.c b/tools/src/h5copy/h5copy.c index 5b19ae7..a6e4d4e 100644 --- a/tools/src/h5copy/h5copy.c +++ b/tools/src/h5copy/h5copy.c @@ -212,8 +212,8 @@ main (int argc, const char *argv[]) unsigned flag = 0; unsigned verbose = 0; unsigned parents = 0; - hid_t ocpl_id = (-1); /* Object copy property list */ - hid_t lcpl_id = (-1); /* Link creation property list */ + hid_t ocpl_id = H5I_INVALID_HID; /* Object copy property list */ + hid_t lcpl_id = H5I_INVALID_HID; /* Link creation property list */ int opt; int li_ret; h5tool_link_info_t linkinfo; diff --git a/tools/src/h5diff/h5diff_common.c b/tools/src/h5diff/h5diff_common.c index a02ad5a..8ed2d37 100644 --- a/tools/src/h5diff/h5diff_common.c +++ b/tools/src/h5diff/h5diff_common.c @@ -75,6 +75,7 @@ static void check_options(diff_opt_t* opts) } } +#if TRILABS-227 /*------------------------------------------------------------------------- * Function: parse_hsize_list * @@ -190,7 +191,7 @@ parse_subset_params(const char *dset) return s; } - +#endif /*------------------------------------------------------------------------- * Function: parse_command_line @@ -479,10 +480,13 @@ void parse_command_line(int argc, const char* argv[], const char** fname1, const /* * TRILABS-227 is complete except for an issue with printing indices * the following calls will enable subsetting + */ +#if TRILABS-227 opts->sset[0] = parse_subset_params(*objname1); opts->sset[1] = parse_subset_params(*objname2); - */ +#endif + H5TOOLS_ENDDEBUG(""); } diff --git a/tools/src/h5diff/h5diff_main.c b/tools/src/h5diff/h5diff_main.c index 33d6570..e14447d 100644 --- a/tools/src/h5diff/h5diff_main.c +++ b/tools/src/h5diff/h5diff_main.c @@ -26,7 +26,7 @@ * Return: An exit status of 0 means no differences were found, 1 means some * differences were found. * - * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * Programmer: Pedro Vicente * * Date: May 9, 2003 * diff --git a/tools/src/h5diff/ph5diff_main.c b/tools/src/h5diff/ph5diff_main.c index c473c8b..2336378 100644 --- a/tools/src/h5diff/ph5diff_main.c +++ b/tools/src/h5diff/ph5diff_main.c @@ -31,7 +31,7 @@ static void ph5diff_worker(int ); * Return: An exit status of 0 means no differences were found, 1 means some * differences were found. * - * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * Programmer: Pedro Vicente * * Date: May 9, 2003 * diff --git a/tools/src/h5format_convert/h5format_convert.c b/tools/src/h5format_convert/h5format_convert.c index d63f36f..e60097b 100644 --- a/tools/src/h5format_convert/h5format_convert.c +++ b/tools/src/h5format_convert/h5format_convert.c @@ -64,7 +64,7 @@ static struct long_options l_opts[] = { { NULL, 0, '\0' } }; - + /*------------------------------------------------------------------------- * Function: usage * @@ -185,7 +185,7 @@ error: return(-1); ; } /* parse_command_line() */ - + /*------------------------------------------------------------------------- * Function: leave * @@ -387,7 +387,7 @@ error: return -1; } /* end convert_dsets_cb() */ - + /*------------------------------------------------------------------------- * Function: main * diff --git a/tools/src/h5import/h5import.c b/tools/src/h5import/h5import.c index 4a642e0..4221eec 100644 --- a/tools/src/h5import/h5import.c +++ b/tools/src/h5import/h5import.c @@ -941,7 +941,7 @@ static int readFloatData(FILE *strm, struct Input *in) * * Return: 0, ok, -1 no * - * Programmer: Pedro Vicente, pvn@hdfgroup.org + * Programmer: Pedro Vicente * * Date: July, 26, 2007 * diff --git a/tools/src/h5ls/h5ls.c b/tools/src/h5ls/h5ls.c index 1b294da..0a641eb 100644 --- a/tools/src/h5ls/h5ls.c +++ b/tools/src/h5ls/h5ls.c @@ -12,7 +12,7 @@ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* - * Programmer: Robb Matzke <matzke@llnl.gov> + * Programmer: Robb Matzke * Monday, March 23, 1998 */ diff --git a/tools/src/h5repack/h5repack.h b/tools/src/h5repack/h5repack.h index caa1166..b124fdb 100644 --- a/tools/src/h5repack/h5repack.h +++ b/tools/src/h5repack/h5repack.h @@ -101,25 +101,27 @@ typedef struct { /* all the above, ready to go to the hrepack call */ typedef struct { - pack_opttbl_t *op_tbl; /*table with all -c and -f options */ - int all_layout; /*apply the layout to all objects */ - int all_filter; /*apply the filter to all objects */ + pack_opttbl_t *op_tbl; /* table with all -c and -f options */ + int all_layout; /* apply the layout to all objects */ + int all_filter; /* apply the filter to all objects */ filter_info_t filter_g[H5_REPACK_MAX_NFILTERS]; /*global filter array for the ALL case */ - int n_filter_g; /*number of global filters */ - chunk_info_t chunk_g; /*global chunk INFO for the ALL case */ - H5D_layout_t layout_g; /*global layout information for the ALL case */ - int verbose; /*verbose mode */ - hsize_t min_comp; /*minimum size to compress, in bytes */ - int use_native; /*use a native type in write */ - hbool_t latest; /*pack file with the latest file format */ - H5F_libver_t low_bound; /* The file's low bound as in H5Fset_libver_bounds() */ - H5F_libver_t high_bound; /* The file's high bound as in H5Fset_libver_bounds() */ - hid_t fin_fapl; /* FAPL to use for opening the input file */ - hid_t fout_fapl; /* FAPL to use for opening/creating the output file */ - int grp_compact; /* Set the maximum number of links to store as header messages in the group */ - int grp_indexed; /* Set the minimum number of links to store in the indexed format */ - int msg_size[8]; /* Minimum size of shared messages: dataspace, - datatype, fill value, filter pipleline, attribute */ + int n_filter_g; /* number of global filters */ + chunk_info_t chunk_g; /* global chunk INFO for the ALL case */ + H5D_layout_t layout_g; /* global layout information for the ALL case */ + int verbose; /* verbose mode */ + hbool_t merge; /* Merge external file. */ + hbool_t prune; /* Don't follow external file. */ + hsize_t min_comp; /* minimum size to compress, in bytes */ + int use_native; /* use a native type in write */ + hbool_t latest; /* pack file with the latest file format */ + H5F_libver_t low_bound; /* The file's low bound as in H5Fset_libver_bounds() */ + H5F_libver_t high_bound; /* The file's high bound as in H5Fset_libver_bounds() */ + hid_t fin_fapl; /* FAPL to use for opening the input file */ + hid_t fout_fapl; /* FAPL to use for opening/creating the output file */ + int grp_compact; /* Set the maximum number of links to store as header messages in the group */ + int grp_indexed; /* Set the minimum number of links to store in the indexed format */ + int msg_size[8]; /* Minimum size of shared messages: dataspace, + datatype, fill value, filter pipleline, attribute */ const char *ublock_filename; /* user block file name */ hsize_t ublock_size; /* user block size */ hsize_t meta_block_size; /* metadata aggregation block size (for H5Pset_meta_block_size) */ diff --git a/tools/src/h5repack/h5repack_copy.c b/tools/src/h5repack/h5repack_copy.c index b1d6ab4..8f3496f 100644 --- a/tools/src/h5repack/h5repack_copy.c +++ b/tools/src/h5repack/h5repack_copy.c @@ -594,6 +594,8 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, hid_t f_space_id = H5I_INVALID_HID; /* file space ID */ hid_t ftype_id = H5I_INVALID_HID; /* file type ID */ hid_t wtype_id = H5I_INVALID_HID; /* read/write type ID */ + hid_t ocpl_id = H5I_INVALID_HID; /* property to pass copy options */ + hid_t lcpl_id = H5I_INVALID_HID; /* link creation property list */ named_dt_t *named_dt_head = NULL; /* Pointer to the stack of named datatypes copied */ size_t msize; /* size of type */ hsize_t nelmts; /* number of elements in dataset */ @@ -610,6 +612,7 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, int req_filter; /* there was a request for a filter */ int req_obj_layout = 0; /* request layout to current object */ unsigned crt_order_flags; /* group creation order flag */ + h5tool_link_info_t linkinfo; unsigned i; unsigned u; int ifil; @@ -619,6 +622,9 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, hsize_t size_dset; int ret_value = 0; + /* init linkinfo struct */ + HDmemset(&linkinfo, 0, sizeof(h5tool_link_info_t)); + /*------------------------------------------------------------------------- * copy the supplied object list *------------------------------------------------------------------------- @@ -1137,26 +1143,25 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, *------------------------------------------------------------------------- */ else { - hid_t pid = H5I_INVALID_HID; - /* create property to pass copy options */ - if ((pid = H5Pcreate(H5P_OBJECT_COPY)) < 0) + if ((ocpl_id = H5Pcreate(H5P_OBJECT_COPY)) < 0) H5TOOLS_GOTO_ERROR((-1), "H5Pcreate failed"); /* set options for object copy */ - if (H5Pset_copy_object(pid, H5O_COPY_WITHOUT_ATTR_FLAG) < 0) + if (H5Pset_copy_object(ocpl_id, H5O_COPY_WITHOUT_ATTR_FLAG) < 0) H5TOOLS_GOTO_ERROR((-1), "H5Pset_copy_object failed"); if (H5Ocopy(fidin, /* Source file or group identifier */ travt->objs[i].name, /* Name of the source object to be copied */ fidout, /* Destination file or group identifier */ travt->objs[i].name, /* Name of the destination object */ - pid, /* Properties which apply to the copy */ + ocpl_id, /* Properties which apply to the copy */ H5P_DEFAULT) < 0) /* Properties which apply to the new hard link */ H5TOOLS_GOTO_ERROR((-1), "H5Ocopy failed"); - if (H5Pclose(pid) < 0) + if (H5Pclose(ocpl_id) < 0) H5TOOLS_GOTO_ERROR((-1), "H5Pclose failed"); + ocpl_id = H5I_INVALID_HID; /*------------------------------------------------------------------------- * Copy attrs manually @@ -1228,11 +1233,61 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, if (options->verbose) HDprintf(FORMAT_OBJ, "link", travt->objs[i].name); - if (H5Lcopy(fidin, travt->objs[i].name, fidout, travt->objs[i].name, H5P_DEFAULT, H5P_DEFAULT) < 0) - H5TOOLS_GOTO_ERROR((-1), "H5Lcopy failed"); + /* Check -X option. */ + if (options->merge) { + if (H5tools_get_symlink_info(fidin, travt->objs[i].name, &linkinfo, 1) == 0) { + /* dangling link */ + if (options->prune) { + HDprintf("Pruned %s.\n", travt->objs[i].name); + } + else { + if (H5Lcopy(fidin, travt->objs[i].name, fidout, travt->objs[i].name, H5P_DEFAULT, H5P_DEFAULT) < 0) + H5TOOLS_GOTO_ERROR((-1), "H5Lcopy failed"); + } + } + else { + /* valid link */ + /* create property to pass copy options */ + if ((ocpl_id = H5Pcreate(H5P_OBJECT_COPY)) < 0) + H5TOOLS_GOTO_ERROR((-1), "H5Pcreate create property failed"); - if (options->verbose) - HDprintf(FORMAT_OBJ, "link", travt->objs[i].name); + /* set options for object copy */ + if (H5Pset_copy_object(ocpl_id, H5O_COPY_EXPAND_EXT_LINK_FLAG) < 0) + H5TOOLS_GOTO_ERROR((-1), "H5Pset_copy_object failed"); + + /* Create link creation property list */ + if((lcpl_id = H5Pcreate(H5P_LINK_CREATE)) < 0) { + H5TOOLS_GOTO_ERROR((-1), "H5Pcreate link creation property failed"); + } + + /* Set flag for intermediate group creation */ + if (H5Pset_create_intermediate_group(lcpl_id, TRUE) < 0) + H5TOOLS_GOTO_ERROR((-1), "H5Pset_create_intermediate_group failed"); + + if (H5Ocopy(fidin, travt->objs[i].name, fidout, travt->objs[i].name, ocpl_id, lcpl_id) < 0) + H5TOOLS_GOTO_ERROR((-1), "H5Ocopy failed"); + + if (H5Pclose(lcpl_id) < 0) + H5TOOLS_GOTO_ERROR((-1), "H5Pclose failed"); + + if (H5Pclose(ocpl_id) < 0) + H5TOOLS_GOTO_ERROR((-1), "H5Pclose failed"); + } + + /* free link info path */ + if (linkinfo.trg_path) + HDfree(linkinfo.trg_path); + linkinfo.trg_path = NULL; + } /* options->merge */ + else { + if (options->prune) { + HDprintf("Pruned %s.\n", travt->objs[i].name); + } + else { + if (H5Lcopy(fidin, travt->objs[i].name, fidout, travt->objs[i].name, H5P_DEFAULT, H5P_DEFAULT) < 0) + H5TOOLS_GOTO_ERROR((-1), "H5Lcopy failed"); + } + } break; default: @@ -1249,15 +1304,22 @@ done: if (named_datatype_free(&named_dt_head, 0) < 0) H5TOOLS_ERROR((-1), "named_datatype_free failed"); } - else + else { H5E_BEGIN_TRY { named_datatype_free(&named_dt_head, 1); } H5E_END_TRY; + } + + /* free link info path */ + if (linkinfo.trg_path) + HDfree(linkinfo.trg_path); H5E_BEGIN_TRY { H5Gclose(grp_in); H5Gclose(grp_out); + H5Pclose(lcpl_id); + H5Pclose(ocpl_id); H5Pclose(dcpl_in); H5Pclose(gcpl_in); H5Pclose(gcpl_out); diff --git a/tools/src/h5repack/h5repack_main.c b/tools/src/h5repack/h5repack_main.c index 0ad61c0..cf0c611 100644 --- a/tools/src/h5repack/h5repack_main.c +++ b/tools/src/h5repack/h5repack_main.c @@ -32,36 +32,38 @@ const char *outfile = NULL; * Command-line options: The user can specify short or long-named * parameters. */ -static const char *s_opts = "hVvf:l:m:e:nLj:k:c:d:s:u:b:M:t:a:i:o:S:P:T:G:q:z:E"; +static const char *s_opts = "a:b:c:d:e:f:hi:j:k:l:m:no:q:s:t:u:vz:EG:LM:P:S:T:VXW1:2:3:4:5:6:"; static struct long_options l_opts[] = { - { "help", no_arg, 'h' }, - { "version", no_arg, 'V' }, - { "verbose", no_arg, 'v' }, + { "alignment", require_arg, 'a' }, + { "block", require_arg, 'b' }, + { "compact", require_arg, 'c' }, + { "indexed", require_arg, 'd' }, + { "file", require_arg, 'e' }, { "filter", require_arg, 'f' }, + { "help", no_arg, 'h' }, + { "infile", require_arg, 'i' }, /* for backward compability */ + { "low", require_arg, 'j' }, + { "high", require_arg, 'k' }, { "layout", require_arg, 'l' }, { "minimum", require_arg, 'm' }, - { "file", require_arg, 'e' }, { "native", no_arg, 'n' }, - { "latest", no_arg, 'L' }, - { "low", require_arg, 'j' }, - { "high", require_arg, 'k' }, - { "compact", require_arg, 'c' }, - { "indexed", require_arg, 'd' }, + { "outfile", require_arg, 'o' }, /* for backward compability */ + { "sort_by", require_arg, 'q' }, { "ssize", require_arg, 's' }, + { "threshold", require_arg, 't' }, { "ublock", require_arg, 'u' }, - { "block", require_arg, 'b' }, + { "verbose", no_arg, 'v' }, + { "sort_order", require_arg, 'z' }, + { "enable-error-stack", no_arg, 'E' }, + { "fs_pagesize", require_arg, 'G' }, + { "latest", no_arg, 'L' }, { "metadata_block_size", require_arg, 'M' }, - { "threshold", require_arg, 't' }, - { "alignment", require_arg, 'a' }, - { "infile", require_arg, 'i' }, /* for backward compability */ - { "outfile", require_arg, 'o' }, /* for backward compability */ - { "fs_strategy", require_arg, 'S' }, { "fs_persist", require_arg, 'P' }, + { "fs_strategy", require_arg, 'S' }, { "fs_threshold", require_arg, 'T' }, - { "fs_pagesize", require_arg, 'G' }, - { "sort_by", require_arg, 'q' }, - { "sort_order", require_arg, 'z' }, - { "enable-error-stack", no_arg, 'E' }, + { "version", no_arg, 'V' }, + { "merge", no_arg, 'X' }, + { "prune", no_arg, 'W' }, { "src-vol-value", require_arg, '1' }, { "src-vol-name", require_arg, '2' }, { "src-vol-info", require_arg, '3' }, @@ -113,6 +115,9 @@ static void usage(const char *prog) { PRINTVALSTREAM(rawoutstream, " --high=BOUND The high bound for library release versions to use\n"); PRINTVALSTREAM(rawoutstream, " when creating objects in the file\n"); PRINTVALSTREAM(rawoutstream, " (default is H5F_LIBVER_LATEST)\n"); + PRINTVALSTREAM(rawoutstream, " --merge Follow external soft link recursively and merge data\n"); + PRINTVALSTREAM(rawoutstream, " --prune Do not follow external soft links and remove link\n"); + PRINTVALSTREAM(rawoutstream, " --merge --prune Follow external link, merge data and remove dangling link\n"); PRINTVALSTREAM(rawoutstream, " -c L1, --compact=L1 Maximum number of links in header messages\n"); PRINTVALSTREAM(rawoutstream, " -d L2, --indexed=L2 Minimum number of links in the indexed format\n"); PRINTVALSTREAM(rawoutstream, " -s S[:F], --ssize=S[:F] Shared object header message minimum size\n"); @@ -545,6 +550,14 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) options->high_bound = bound; break; + case 'X': + options->merge = TRUE; + break; + + case 'W': + options->prune = TRUE; + break; + case 'c': options->grp_compact = HDatoi( opt_arg ); if (options->grp_compact > 0) diff --git a/tools/src/h5repack/h5repack_parse.c b/tools/src/h5repack/h5repack_parse.c index 95cacc1..50ccd7a 100644 --- a/tools/src/h5repack/h5repack_parse.c +++ b/tools/src/h5repack/h5repack_parse.c @@ -478,7 +478,7 @@ obj_list_t* parse_filter(const char *str, unsigned *n_objs, filter_info_t *filt, * Example: * "AA,B,CDE:CHUNK=10X10" * - * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * Programmer: Pedro Vicente * * Date: December 30, 2003 * diff --git a/tools/src/h5repack/h5repack_refs.c b/tools/src/h5repack/h5repack_refs.c index 2685823..5baabb6 100644 --- a/tools/src/h5repack/h5repack_refs.c +++ b/tools/src/h5repack/h5repack_refs.c @@ -537,7 +537,6 @@ static int copy_refs_attr(hid_t loc_in, KY 2020-02-07 */ is_ref_comp = (ref_comp_field_n > 0); - } diff --git a/tools/src/misc/h5debug.c b/tools/src/misc/h5debug.c index f986354..6fa8b5f 100644 --- a/tools/src/misc/h5debug.c +++ b/tools/src/misc/h5debug.c @@ -15,7 +15,7 @@ * * Created: debug.c * Jul 18 1997 - * Robb Matzke <matzke@llnl.gov> + * Robb Matzke * * Purpose: Debugs an existing HDF5 file at a low level. * @@ -237,7 +237,6 @@ get_H5FA_class(const uint8_t *sig) * Failure: exit (non-zero) * * Programmer: Robb Matzke - * matzke@llnl.gov * Jul 18 1997 * *------------------------------------------------------------------------- diff --git a/tools/src/misc/h5mkgrp.c b/tools/src/misc/h5mkgrp.c index 4d2d2b8..ad3b7b8 100644 --- a/tools/src/misc/h5mkgrp.c +++ b/tools/src/misc/h5mkgrp.c @@ -49,7 +49,7 @@ typedef struct mkgrp_opt_t { mkgrp_opt_t params_g; /* Command line parameter settings */ - + /*------------------------------------------------------------------------- * Function: leave * @@ -81,7 +81,7 @@ leave(int ret) HDexit(ret); } /* end leave() */ - + /*------------------------------------------------------------------------- * Function: usage * @@ -113,7 +113,7 @@ usage(const char *prog) PRINTVALSTREAM(rawoutstream, "\n"); } /* end usage() */ - + /*------------------------------------------------------------------------- * Function: parse_command_line * @@ -248,7 +248,7 @@ parse_command_line(int argc, const char *argv[], mkgrp_opt_t *options) return 0; } /* parse_command_line() */ - + /*------------------------------------------------------------------------- * Function: main * diff --git a/tools/src/misc/h5repart.c b/tools/src/misc/h5repart.c index d516fa0..371cf2c 100644 --- a/tools/src/misc/h5repart.c +++ b/tools/src/misc/h5repart.c @@ -12,7 +12,7 @@ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* - * Programmer: Robb Matzke <matzke@llnl.gov> + * Programmer: Robb Matzke * Wednesday, May 13, 1998 * * Purpose: Repartitions a file family. This program can be used to diff --git a/tools/test/h5copy/testh5copy.sh.in b/tools/test/h5copy/testh5copy.sh.in index 2440ca4..ebbcb6c 100644 --- a/tools/test/h5copy/testh5copy.sh.in +++ b/tools/test/h5copy/testh5copy.sh.in @@ -13,7 +13,7 @@ # # Tests for the h5copy tool # -# Pedro Vicente Nunes (pvn@hdfgroup.org), Albert Cheng (acheng@hdfgroup.org) +# Pedro Vicente Nunes, Albert Cheng # Thursday, July 20, 2006 # @@ -200,6 +200,7 @@ TOOLTEST() fi runh5diff=no fi + if [ "$3" = -o ]; then outputfile=$4 else @@ -219,6 +220,7 @@ TOOLTEST() $RUNSERIAL $H5COPY_BIN $@ ) > $actualout 2> $actualerr RET=$? + if [ $RET != 0 ]; then echo "*FAILED*" echo "failed result is:" @@ -268,6 +270,7 @@ TOOLTEST_PREFILL() $RUNSERIAL $H5COPY_BIN -i $inputfile -o $outputfile -v -s $grp_name -d $grp_name2 ) > $actualout 2> $actualerr RET=$? + if [ $RET != 0 ]; then echo "*FAILED*" echo "failed result is:" @@ -282,6 +285,7 @@ TOOLTEST_PREFILL() $RUNSERIAL $H5COPY_BIN -i $inputfile -o $outputfile -v -s $obj_name -d $obj_name2 ) > $actualout 2> $actualerr RET=$? + if [ $RET != 0 ]; then echo "*FAILED*" echo "failed result is:" @@ -313,6 +317,7 @@ TOOLTEST_SAME() else runh5diff=no fi + if [ "$3" = -o ]; then outputfile=$4 else @@ -330,6 +335,7 @@ TOOLTEST_SAME() $RUNSERIAL $H5COPY_BIN -i $inputfile -o $outputfile -v -s $grp_name -d $grp_name ) > $actualout 2> $actualerr RET=$? + if [ $RET != 0 ]; then echo "*FAILED*" echo "failed result is:" @@ -344,6 +350,7 @@ TOOLTEST_SAME() $RUNSERIAL $H5COPY_BIN -i $outputfile -o $outputfile -v -s $grp_name -d $grp_name2 ) > $actualout 2> $actualerr RET=$? + if [ $RET != 0 ]; then echo "*FAILED*" echo "failed result is:" @@ -406,6 +413,7 @@ TOOLTEST_FAIL() if [ "$1" = -i ]; then inputfile=$2 fi + if [ "$3" = -o ]; then outputfile=$4 fi @@ -417,8 +425,8 @@ TOOLTEST_FAIL() #echo "#############################" $RUNSERIAL $H5COPY_BIN $@ ) > $actualout 2> $actualerr - RET=$? + # save actualout and actualerr in case they are needed later. cp $actualout $actualout_sav STDOUT_FILTER $actualout diff --git a/tools/test/h5diff/CMakeTests.cmake b/tools/test/h5diff/CMakeTests.cmake index 74e3929..4e8e8d1 100644 --- a/tools/test/h5diff/CMakeTests.cmake +++ b/tools/test/h5diff/CMakeTests.cmake @@ -293,6 +293,7 @@ ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_80.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_800.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_801.txt + ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_830.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_90.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_8625.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_8639.txt @@ -341,9 +342,10 @@ # Overwrite system dependent files (Windows) and not VS2015 # set (COPY_WINDOWS_FILES false) - if (MINGW) - set (COPY_WINDOWS_FILES true) - endif () + # MinGW tests may depend on host system + #if (MINGW) + # set (COPY_WINDOWS_FILES true) + #endif () if (WIN32 AND MSVC_VERSION LESS 1900) set (COPY_WINDOWS_FILES true) endif () @@ -918,6 +920,8 @@ h5diff_800.out.err h5diff_801.out h5diff_801.out.err + h5diff_830.out + h5diff_830.out.err h5diff_8625.out h5diff_8625.out.err h5diff_8639.out @@ -1543,6 +1547,11 @@ ADD_H5_TEST (h5diff_800 1 -v ${FILE7} ${FILE8} /g1/array /g1/array) ADD_H5_TEST (h5diff_801 1 -v ${FILE7} ${FILE8A} /g1/array /g1/array) # ############################################################################## +# # dataset subsets +# ############################################################################## +#TRILABS-227 ADD_H5_TEST (h5diff_830 1 --enable-error-stack -v ${FILE7} ${FILE8} /g1/array3D[0,0,0;2,2,1;2,2,2;] /g1/array3D[0,0,0;2,2,1;2,2,2;]) + +# ############################################################################## # # VDS tests # ############################################################################## ADD_H5_TEST (h5diff_v1 0 -v ${FILEV1} ${FILEV2}) diff --git a/tools/test/h5diff/h5diff_plugin.sh.in b/tools/test/h5diff/h5diff_plugin.sh.in index 341cba5..ffc43da 100644 --- a/tools/test/h5diff/h5diff_plugin.sh.in +++ b/tools/test/h5diff/h5diff_plugin.sh.in @@ -135,24 +135,24 @@ CLEAN_TESTFILES_AND_TESTDIR() # -h print help page while [ $# -gt 0 ]; do case "$1" in - -p) # reset the tool name and bin to run ph5diff tests - TESTNAME=ph5diff - H5DIFF=../../src/h5diff/ph5diff # The tool name - H5DIFF_BIN=`pwd`/$H5DIFF # The path of the tool binary - pmode=yes - shift - ;; + -p) # reset the tool name and bin to run ph5diff tests + TESTNAME=ph5diff + H5DIFF=../../src/h5diff/ph5diff # The tool name + H5DIFF_BIN=`pwd`/$H5DIFF # The path of the tool binary + pmode=yes + shift + ;; -h) # print help page - echo "$0 [-p] [-h]" - echo " -p run ph5diff tests" - echo " -h print help page" - shift - exit 0 - ;; + echo "$0 [-p] [-h]" + echo " -p run ph5diff tests" + echo " -h print help page" + shift + exit 0 + ;; *) # unknown option echo "$0: Unknown option ($1)" - exit 1 - ;; + exit 1 + ;; esac done @@ -218,19 +218,21 @@ TOOLTEST() { # Run test. TESTING $H5DIFF $@ ( - #echo "#############################" - #echo "Expected output for '$H5DIFF $@'" - #echo "#############################" - cd $TESTDIR - eval $ENVCMD $RUNCMD $H5DIFF_BIN "$@" + #echo "#############################" + #echo "Expected output for '$H5DIFF $@'" + #echo "#############################" + cd $TESTDIR + eval $ENVCMD $RUNCMD $H5DIFF_BIN "$@" ) >$actual 2>$actual_err EXIT_CODE=$? + # save actual and actual_err in case they are needed later. cp $actual $actual_sav STDOUT_FILTER $actual cp $actual_err $actual_err_sav STDERR_FILTER $actual_err cat $actual_err >> $actual + # don't add exit code check in pmode, as it causes failure. (exit code # is from mpirun not tool) # if any problem occurs relate to an exit code, it will be caught in @@ -260,27 +262,29 @@ TOOLTEST() { actual_sorted=actual_sorted sort $expect -o $expect_sorted sort $actual -o $actual_sorted + # remove "EXIT CODE:" line from expect file. test for exit code # is done by serial mode. grep -v "EXIT CODE:" $expect_sorted > $expect_sorted.noexit mv $expect_sorted.noexit $expect_sorted - if $CMP $expect_sorted $actual_sorted; then - echo " PASSED" - else - echo "*FAILED*" - nerrors="`expr $nerrors + 1`" - if test yes = "$verbose"; then - echo "====Expected result ($expect_sorted) differs from actual result ($actual_sorted)" - $DIFF $expect_sorted $actual_sorted |sed 's/^/ /' - echo "====The actual output ($actual_sav)" - sed 's/^/ /' < $actual_sav - echo "====The actual stderr ($actual_err_sav)" - sed 's/^/ /' < $actual_err_sav - echo "====End of actual stderr ($actual_err_sav)" - echo "" + + if $CMP $expect_sorted $actual_sorted; then + echo " PASSED" + else + echo "*FAILED*" + nerrors="`expr $nerrors + 1`" + if test yes = "$verbose"; then + echo "====Expected result ($expect_sorted) differs from actual result ($actual_sorted)" + $DIFF $expect_sorted $actual_sorted |sed 's/^/ /' + echo "====The actual output ($actual_sav)" + sed 's/^/ /' < $actual_sav + echo "====The actual stderr ($actual_err_sav)" + sed 's/^/ /' < $actual_err_sav + echo "====End of actual stderr ($actual_err_sav)" + echo "" + fi fi fi - fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then @@ -306,18 +310,20 @@ TOOLTEST_ERR() { # Run test. TESTING $H5DIFF $@ ( - #echo "#############################" - #echo "Expected output for '$H5DIFF $@'" - #echo "#############################" - cd $TESTDIR - eval $ENVCMD $RUNCMD $H5DIFF_BIN "$@" + #echo "#############################" + #echo "Expected output for '$H5DIFF $@'" + #echo "#############################" + cd $TESTDIR + eval $ENVCMD $RUNCMD $H5DIFF_BIN "$@" ) >$actual 2>$actual_err EXIT_CODE=$? + # save actual and actual_err in case they are needed later. cp $actual $actual_sav STDOUT_FILTER $actual cp $actual_err $actual_err_sav STDERR_FILTER $actual_err + # don't add exit code check in pmode, as it causes failure. (exit code # is from mpirun not tool) # if any problem occurs relate to an exit code, it will be caught in @@ -348,23 +354,24 @@ TOOLTEST_ERR() { sort $expect_err -o $expect_sorted sort $actual_err -o $actual_sorted mv $expect_sorted.noexit $expect_sorted - if $CMP $expect_sorted $actual_sorted; then - echo " PASSED" - else - echo "*FAILED*" - nerrors="`expr $nerrors + 1`" - if test yes = "$verbose"; then - echo "====Expected result ($expect_sorted) differs from actual result ($actual_sorted)" - $DIFF $expect_sorted $actual_sorted |sed 's/^/ /' - echo "====The actual output ($actual_sav)" - sed 's/^/ /' < $actual_sav - echo "====The actual stderr ($actual_err_sav)" - sed 's/^/ /' < $actual_err_sav - echo "====End of actual stderr ($actual_err_sav)" - echo "" + + if $CMP $expect_sorted $actual_sorted; then + echo " PASSED" + else + echo "*FAILED*" + nerrors="`expr $nerrors + 1`" + if test yes = "$verbose"; then + echo "====Expected result ($expect_sorted) differs from actual result ($actual_sorted)" + $DIFF $expect_sorted $actual_sorted |sed 's/^/ /' + echo "====The actual output ($actual_sav)" + sed 's/^/ /' < $actual_sav + echo "====The actual stderr ($actual_err_sav)" + sed 's/^/ /' < $actual_err_sav + echo "====End of actual stderr ($actual_err_sav)" + echo "" + fi fi fi - fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then diff --git a/tools/test/h5diff/h5diffgentest.c b/tools/test/h5diff/h5diffgentest.c index bdc2ddc..173a5ce 100644 --- a/tools/test/h5diff/h5diffgentest.c +++ b/tools/test/h5diff/h5diffgentest.c @@ -31,7 +31,7 @@ size_t H5TOOLS_MALLOCSIZE = (128 * 1024 * 1024); * * Purpose: generate files for h5diff testing * - * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu + * Programmer: Pedro Vicente * * Date: November 12, 2003 * @@ -8035,7 +8035,6 @@ void test_double_epsilon(const char *fname1, const char *fname2) { hid_t fid1 = H5I_INVALID_HID, fid2 = H5I_INVALID_HID; hsize_t dims1[2] = { 4, 7 }; - hsize_t dims2[2] = { 4, 7 }; double wdata[4][7]; int i, j; diff --git a/tools/test/h5diff/testfiles/h5diff_830.txt b/tools/test/h5diff/testfiles/h5diff_830.txt new file mode 100644 index 0000000..8f00d8b --- /dev/null +++ b/tools/test/h5diff/testfiles/h5diff_830.txt @@ -0,0 +1,30 @@ +dataset: </g1/array3D> and </g1/array3D> +size: [4x3x2] [4x3x2] +position array3D array3D difference +------------------------------------------------------------ +[ 0 0 0 ] 1 0 1 +[ 0 0 0 ] 2 0 2 +[ 0 0 0 ] 3 0 3 +[ 0 0 1 ] 4 0 4 +[ 0 0 1 ] 5 0 5 +[ 0 0 1 ] 6 0 6 +[ 0 2 0 ] 13 0 13 +[ 0 2 0 ] 14 0 14 +[ 0 2 0 ] 15 0 15 +[ 0 2 1 ] 16 0 16 +[ 0 2 1 ] 17 0 17 +[ 0 2 1 ] 18 0 18 +[ 2 0 0 ] 37 0 37 +[ 2 0 0 ] 38 0 38 +[ 2 0 0 ] 39 0 39 +[ 2 0 1 ] 40 0 40 +[ 2 0 1 ] 41 0 41 +[ 2 0 1 ] 42 0 42 +[ 2 2 0 ] 49 0 49 +[ 2 2 0 ] 50 0 50 +[ 2 2 0 ] 51 0 51 +[ 2 2 1 ] 52 0 52 +[ 2 2 1 ] 53 0 53 +[ 2 2 1 ] 54 0 54 +24 differences found +EXIT CODE: 1 diff --git a/tools/test/h5diff/testh5diff.sh.in b/tools/test/h5diff/testh5diff.sh.in index 4e622ee..587c340 100644 --- a/tools/test/h5diff/testh5diff.sh.in +++ b/tools/test/h5diff/testh5diff.sh.in @@ -354,6 +354,7 @@ $SRC_H5DIFF_TESTFILES/h5diff_710.txt $SRC_H5DIFF_TESTFILES/h5diff_80.txt $SRC_H5DIFF_TESTFILES/h5diff_800.txt $SRC_H5DIFF_TESTFILES/h5diff_801.txt +$SRC_H5DIFF_TESTFILES/h5diff_830.txt $SRC_H5DIFF_TESTFILES/h5diff_90.txt $SRC_H5DIFF_TESTFILES/h5diff_8625.txt $SRC_H5DIFF_TESTFILES/h5diff_8639.txt @@ -500,18 +501,20 @@ TOOLTEST() { # Run test. TESTING $H5DIFF $@ ( - #echo "#############################" - #echo "Expected output for '$H5DIFF $@'" - #echo "#############################" - cd $TESTDIR - eval $RUNCMD $H5DIFF_BIN "$@" + #echo "#############################" + #echo "Expected output for '$H5DIFF $@'" + #echo "#############################" + cd $TESTDIR + eval $RUNCMD $H5DIFF_BIN "$@" ) >$actual 2>$actual_err EXIT_CODE=$? + # save actual and actual_err in case they are needed later. cp $actual $actual_sav STDOUT_FILTER $actual cp $actual_err $actual_err_sav STDERR_FILTER $actual_err + # don't add exit code check in pmode, as it causes failure. (exit code # is from mpirun not tool) # if any problem occurs relate to an exit code, it will be caught in @@ -545,23 +548,24 @@ TOOLTEST() { # is done by serial mode. grep -v "EXIT CODE:" $expect_sorted > $expect_sorted.noexit mv $expect_sorted.noexit $expect_sorted - if $CMP $expect_sorted $actual_sorted; then - echo " PASSED" - else - echo "*FAILED*" - nerrors="`expr $nerrors + 1`" - if test yes = "$verbose"; then - echo "====Expected result ($expect_sorted) differs from actual result ($actual_sorted)" - $DIFF $expect_sorted $actual_sorted |sed 's/^/ /' - echo "====The actual output ($actual_sav)" - sed 's/^/ /' < $actual_sav - echo "====The actual stderr ($actual_err_sav)" - sed 's/^/ /' < $actual_err_sav - echo "====End of actual stderr ($actual_err_sav)" - echo "" + + if $CMP $expect_sorted $actual_sorted; then + echo " PASSED" + else + echo "*FAILED*" + nerrors="`expr $nerrors + 1`" + if test yes = "$verbose"; then + echo "====Expected result ($expect_sorted) differs from actual result ($actual_sorted)" + $DIFF $expect_sorted $actual_sorted |sed 's/^/ /' + echo "====The actual output ($actual_sav)" + sed 's/^/ /' < $actual_sav + echo "====The actual stderr ($actual_err_sav)" + sed 's/^/ /' < $actual_err_sav + echo "====End of actual stderr ($actual_err_sav)" + echo "" + fi fi fi - fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then @@ -1199,6 +1203,11 @@ TOOLTEST h5diff_800.txt -v h5diff_dset1.h5 h5diff_dset2.h5 /g1/array /g1/array TOOLTEST h5diff_801.txt -v h5diff_dset1.h5 h5diff_dset3.h5 /g1/array /g1/array # ############################################################################## +# # dataset subsets +# ############################################################################## +#TRILABS-227 TOOLTEST h5diff_830.txt --enable-error-stack -v h5diff_dset1.h5 h5diff_dset2.h5 /g1/array3D[0,0,0;2,2,1;2,2,2;] /g1/array3D[0,0,0;2,2,1;2,2,2;] + +# ############################################################################## # VDS tests # ############################################################################## TOOLTEST h5diff_v1.txt -v 1_vds.h5 2_vds.h5 diff --git a/tools/test/h5dump/h5dump_plugin.sh.in b/tools/test/h5dump/h5dump_plugin.sh.in index 6a00a16..d940ab3 100644 --- a/tools/test/h5dump/h5dump_plugin.sh.in +++ b/tools/test/h5dump/h5dump_plugin.sh.in @@ -181,8 +181,8 @@ TOOLTEST() { # Run test. TESTING $H5DUMP $@ ( - cd $TESTDIR - $ENVCMD $RUNSERIAL $H5DUMP_BIN "$@" + cd $TESTDIR + $ENVCMD $RUNSERIAL $H5DUMP_BIN "$@" ) >$actual 2>$actual_err # save actual and actual_err in case they are needed later. @@ -192,24 +192,24 @@ TOOLTEST() { STDERR_FILTER $actual_err cat $actual_err >> $actual - if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + if [ ! -f $expect ]; then + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual > /dev/null 2>&1 ; then - echo " PASSED" + echo " PASSED" else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $caseless $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $caseless $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav $actual_ext + rm -f $actual $actual_err $actual_sav $actual_err_sav $actual_ext fi } diff --git a/tools/test/h5dump/h5dumpgentest.c b/tools/test/h5dump/h5dumpgentest.c index 731e233..3bb6604 100644 --- a/tools/test/h5dump/h5dumpgentest.c +++ b/tools/test/h5dump/h5dumpgentest.c @@ -3964,7 +3964,7 @@ static void gent_char(void) * * Return: void * - * Programmer: pvn@ncsa.uiuc.edu + * Programmer: Pedro Vicente * * Date: May 28, 2003 * @@ -4404,7 +4404,7 @@ static void write_attr_in(hid_t loc_id, * * Return: void * - * Programmer: pvn@ncsa.uiuc.edu + * Programmer: Pedro Vicente * * Date: May 28, 2003 * @@ -4854,7 +4854,7 @@ static void write_dset_in(hid_t loc_id, * * Return: void * - * Programmer: pvn@ncsa.uiuc.edu + * Programmer: Pedro Vicente * * Date: May 19, 2003 * @@ -4923,7 +4923,7 @@ static void gent_attr_all(void) * * Purpose: utility function to write an attribute * - * Programmer: pvn@ncsa.uiuc.edu + * Programmer: Pedro Vicente * * Date: May 19, 2003 * @@ -4962,7 +4962,7 @@ int write_attr(hid_t loc_id, int rank, hsize_t *dims, const char *attr_name, * * Return: * - * Programmer: pvn@ncsa.uiuc.edu + * Programmer: Pedro Vicente * * Date: May 27, 2003 * diff --git a/tools/test/h5dump/testh5dump.sh.in b/tools/test/h5dump/testh5dump.sh.in index 53c8927..b69346e 100644 --- a/tools/test/h5dump/testh5dump.sh.in +++ b/tools/test/h5dump/testh5dump.sh.in @@ -465,14 +465,14 @@ TESTING() { TOOLTEST() { # check if caseless compare and diff requested if [ "$1" = ignorecase ]; then - caseless="-i" - # replace cmp with diff which runs much longer. - xCMP="$DIFF -i" - shift + caseless="-i" + # replace cmp with diff which runs much longer. + xCMP="$DIFF -i" + shift else - caseless="" - # stick with faster cmp if ignorecase is not requested. - xCMP="$CMP" + caseless="" + # stick with faster cmp if ignorecase is not requested. + xCMP="$CMP" fi expect="$TESTDIR/$1" @@ -485,8 +485,8 @@ TOOLTEST() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err # save actual and actual_err in case they are needed later. @@ -495,24 +495,24 @@ TOOLTEST() { cp $actual_err $actual_err_sav STDERR_FILTER $actual_err - if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + if [ ! -f $expect ]; then + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" elif $xCMP $expect $actual > /dev/null 2>&1 ; then - echo " PASSED" + echo " PASSED" else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $caseless $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $caseless $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav $actual_ext + rm -f $actual $actual_err $actual_sav $actual_err_sav $actual_ext fi } @@ -534,41 +534,41 @@ TOOLTEST2() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" - elif $CMP $expect $actual; then - if [ ! -f $expectdata ]; then - # Create the expect data file if it doesn't yet exist. + # Create the expect file if it doesn't yet exist. echo " CREATED" - cp $actualdata $expectdata - echo " Expected data (*.exp) missing" + cp $actual $expect + echo " Expected result (*.ddl) missing" nerrors="`expr $nerrors + 1`" - elif $CMP $expectdata $actualdata; then - echo " PASSED" - else + elif $CMP $expect $actual; then + if [ ! -f $expectdata ]; then + # Create the expect data file if it doesn't yet exist. + echo " CREATED" + cp $actualdata $expectdata + echo " Expected data (*.exp) missing" + nerrors="`expr $nerrors + 1`" + elif $CMP $expectdata $actualdata; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' + fi + else echo "*FAILED*" - echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" + echo " Expected result (*.ddl) differs from actual result (*.out)" nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' - fi - else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actualdata $actual_err + rm -f $actual $actualdata $actual_err fi } @@ -592,56 +592,55 @@ TOOLTEST2A() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" - elif $CMP $expect $actual; then - if [ ! -f $expectdata ]; then - # Create the expect data file if it doesn't yet exist. + # Create the expect file if it doesn't yet exist. echo " CREATED" - cp $actualdata $expectdata - echo " Expected data (*.exp) missing" + cp $actual $expect + echo " Expected result (*.ddl) missing" nerrors="`expr $nerrors + 1`" - elif $DIFF $expectdata $actualdata; then - if [ ! -f $expectmeta ]; then - # Create the expect meta file if it doesn't yet exist. - echo " CREATED" - cp $actualmeta $expectmeta - echo " Expected metafile (*.ddl) missing" - nerrors="`expr $nerrors + 1`" - elif $CMP $expectmeta $actualmeta; then - echo " PASSED" + elif $CMP $expect $actual; then + if [ ! -f $expectdata ]; then + # Create the expect data file if it doesn't yet exist. + echo " CREATED" + cp $actualdata $expectdata + echo " Expected data (*.exp) missing" + nerrors="`expr $nerrors + 1`" + elif $DIFF $expectdata $actualdata; then + if [ ! -f $expectmeta ]; then + # Create the expect meta file if it doesn't yet exist. + echo " CREATED" + cp $actualmeta $expectmeta + echo " Expected metafile (*.ddl) missing" + nerrors="`expr $nerrors + 1`" + elif $CMP $expectmeta $actualmeta; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected metafile (*.ddl) differs from actual metafile (*.txt)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expectmeta $actualmeta |sed 's/^/ /' + fi else - echo "*FAILED*" - echo " Expected metafile (*.ddl) differs from actual metafile (*.txt)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expectmeta $actualmeta |sed 's/^/ /' + echo "*FAILED*" + echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' fi - else + else echo "*FAILED*" - echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" + echo " Expected result (*.ddl) differs from actual result (*.out)" nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' - fi - else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actualdata $actual_err $actualmeta + rm -f $actual $actualdata $actual_err $actualmeta fi - } # same as TOOLTEST2 but only compares the generated data file to the expected data file @@ -658,28 +657,28 @@ TOOLTEST2B() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err if [ ! -f $expectdata ]; then - # Create the expect data file if it doesn't yet exist. - echo " CREATED" - cp $actualdata $expectdata - echo " Expected data (*.exp) missing" - nerrors="`expr $nerrors + 1`" + # Create the expect data file if it doesn't yet exist. + echo " CREATED" + cp $actualdata $expectdata + echo " Expected data (*.exp) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expectdata $actualdata; then - echo " PASSED" + echo " PASSED" else - echo "*FAILED*" - echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' + echo "*FAILED*" + echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actualdata $actual_err + rm -f $actual $actualdata $actual_err fi } @@ -699,8 +698,8 @@ TOOLTEST3() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err # save actual and actual_err in case they are needed later. @@ -719,23 +718,23 @@ TOOLTEST3() { $actual_err > $actual_ext if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual; then - echo " PASSED" + echo " PASSED" else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav + rm -f $actual $actual_err $actual_sav $actual_err_sav fi } @@ -757,8 +756,8 @@ TOOLTEST4() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $ENVCMD $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $ENVCMD $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err # save actual and actual_err in case they are needed later. @@ -777,30 +776,30 @@ TOOLTEST4() { $actual_err > $actual_ext if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual; then - if $CMP $expect_err $actual_ext; then - echo " PASSED" - else - echo "*FAILED*" - echo " Expected result (*.err) differs from actual result (*.oerr)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect_err $actual_ext |sed 's/^/ /' - fi + if $CMP $expect_err $actual_ext; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected result (*.err) differs from actual result (*.oerr)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect_err $actual_ext |sed 's/^/ /' + fi else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav + rm -f $actual $actual_err $actual_sav $actual_err_sav fi } @@ -822,8 +821,8 @@ TOOLTEST5() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $ENVCMD $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $ENVCMD $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err # save actual and actual_err in case they are needed later. @@ -842,33 +841,33 @@ TOOLTEST5() { $actual_err > $actual_ext if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual; then - if $CMP $expect_err $actual_ext; then - echo " PASSED" - else - echo "*FAILED*" - echo " Expected result (*.err) differs from actual result (*.oerr)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect_err $actual_ext |sed 's/^/ /' - fi + if $CMP $expect_err $actual_ext; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected result (*.err) differs from actual result (*.oerr)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect_err $actual_ext |sed 's/^/ /' + fi else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav + rm -f $actual $actual_err $actual_sav $actual_err_sav fi - } + # ADD_HELP_TEST TOOLTEST_HELP() { @@ -880,27 +879,27 @@ TOOLTEST_HELP() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err if [ ! -f $expectdata ]; then - # Create the expect data file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect-CREATED - echo " Expected output (*.txt) missing" - nerrors="`expr $nerrors + 1`" + # Create the expect data file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect-CREATED + echo " Expected output (*.txt) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual; then - echo " PASSED" + echo " PASSED" else - echo "*FAILED*" - echo " Expected output (*.txt) differs from actual output (*.out)" - nerrors="`expr $nerrors + 1`" + echo "*FAILED*" + echo " Expected output (*.txt) differs from actual output (*.out)" + nerrors="`expr $nerrors + 1`" fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err + rm -f $actual $actual_err fi } @@ -920,14 +919,16 @@ GREPTEST() # Run test. TESTING $DUMPER -p $@ ( - cd $TESTDIR - $ENVCMD $RUNSERIAL $DUMPER_BIN -p "$@" + cd $TESTDIR + $ENVCMD $RUNSERIAL $DUMPER_BIN -p "$@" ) >$actual 2>$actual_err + if [ "$txttype" = "ERRTXT" ]; then $GREP "$expectdata" $actual_err > /dev/null else $GREP "$expectdata" $actual > /dev/null fi + if [ $? -eq 0 ]; then echo " PASSED" else @@ -937,7 +938,7 @@ GREPTEST() # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err + rm -f $actual $actual_err fi } @@ -956,14 +957,16 @@ GREPTEST2() # Run test. TESTING $DUMPER -p $@ ( - cd $TESTDIR - $ENVCMD $RUNSERIAL $DUMPER_BIN -p "$@" + cd $TESTDIR + $ENVCMD $RUNSERIAL $DUMPER_BIN -p "$@" ) >$actual 2>$actual_err + if [ "$txttype" = "ERRTXT" ]; then $GREP "$expectdata" $actual_err > /dev/null else $GREP "$expectdata" $actual > /dev/null fi + if [ $? -eq 0 ]; then echo " PASSED" else @@ -973,21 +976,21 @@ GREPTEST2() # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err + rm -f $actual $actual_err fi } # Print a "SKIP" message SKIP() { - TESTING $DUMPER $@ + TESTING $DUMPER $@ echo " -SKIP-" } # Print a line-line message left justified in a field of 70 characters # PRINT_H5DIFF() { - SPACES=" " - echo " Running h5diff $* $SPACES" | cut -c1-70 | tr -d '\012' + SPACES=" " + echo " Running h5diff $* $SPACES" | cut -c1-70 | tr -d '\012' } @@ -997,10 +1000,11 @@ DIFFTEST() { PRINT_H5DIFF $@ ( - cd $TESTDIR - $RUNSERIAL $H5DIFF_BIN "$@" -q + cd $TESTDIR + $RUNSERIAL $H5DIFF_BIN "$@" -q ) RET=$? + if [ $RET != 0 ] ; then echo "*FAILED*" nerrors="`expr $nerrors + 1`" @@ -1014,8 +1018,8 @@ DIFFTEST() # beginning with the word "Verifying". # PRINT_H5IMPORT() { - SPACES=" " - echo " Running h5import $* $SPACES" | cut -c1-70 | tr -d '\012' + SPACES=" " + echo " Running h5import $* $SPACES" | cut -c1-70 | tr -d '\012' } # Call the h5import tool @@ -1025,15 +1029,16 @@ IMPORTTEST() # remove the output hdf5 file if it exists hdf5_file="$TESTDIR/$5" if [ -f $hdf5_file ]; then - rm -f $hdf5_file + rm -f $hdf5_file fi PRINT_H5IMPORT $@ ( - cd $TESTDIR - $RUNSERIAL $H5IMPORT_BIN "$@" + cd $TESTDIR + $RUNSERIAL $H5IMPORT_BIN "$@" ) RET=$? + if [ $RET != 0 ] ; then echo "*FAILED*" nerrors="`expr $nerrors + 1`" @@ -1138,9 +1143,9 @@ TOOLTEST tcomp-4.ddl --enable-error-stack tcompound_complex.h5 TOOLTEST tcompound_complex2.ddl --enable-error-stack tcompound_complex2.h5 # tests for bitfields and opaque data types if test $WORDS_BIGENDIAN != "yes"; then -TOOLTEST tbitnopaque_le.ddl --enable-error-stack tbitnopaque.h5 + TOOLTEST tbitnopaque_le.ddl --enable-error-stack tbitnopaque.h5 else -TOOLTEST tbitnopaque_be.ddl --enable-error-stack tbitnopaque.h5 + TOOLTEST tbitnopaque_be.ddl --enable-error-stack tbitnopaque.h5 fi #test for the nested compound type @@ -1318,12 +1323,12 @@ TOOLTEST tallfilters.ddl --enable-error-stack -H -p -d all tfilters.h5 TOOLTEST tuserfilter.ddl --enable-error-stack -H -p -d myfilter tfilters.h5 if test $USE_FILTER_DEFLATE = "yes" ; then - # data read internal filters - TOOLTEST treadintfilter.ddl --enable-error-stack -d deflate -d shuffle -d fletcher32 -d nbit -d scaleoffset tfilters.h5 - if test $USE_FILTER_SZIP = "yes"; then - # data read - TOOLTEST treadfilter.ddl --enable-error-stack -d all -d szip tfilters.h5 - fi + # data read internal filters + TOOLTEST treadintfilter.ddl --enable-error-stack -d deflate -d shuffle -d fletcher32 -d nbit -d scaleoffset tfilters.h5 + if test $USE_FILTER_SZIP = "yes"; then + # data read + TOOLTEST treadfilter.ddl --enable-error-stack -d all -d szip tfilters.h5 + fi fi # test for displaying objects with very long names @@ -1380,9 +1385,9 @@ TOOLTEST tbin4.ddl --enable-error-stack -d double -b FILE -o out4.bin tbin # Clean up binary output files if test -z "$HDF5_NOCLEANUP"; then - rm -f out[1-4].bin - rm -f out1.h5 - rm -f out3.h5 + rm -f out[1-4].bin + rm -f out1.h5 + rm -f out3.h5 fi # test for dataset region references @@ -1394,7 +1399,7 @@ TOOLTEST2 tbinregR.exp --enable-error-stack -d /Dataset1 -s 0 -R -y -o tbinregR. # Clean up text output files if test -z "$HDF5_NOCLEANUP"; then - rm -f tbinregR.txt + rm -f tbinregR.txt fi # tests for group creation order diff --git a/tools/test/h5dump/testh5dumppbits.sh.in b/tools/test/h5dump/testh5dumppbits.sh.in index febce2c..ff0659a 100644 --- a/tools/test/h5dump/testh5dumppbits.sh.in +++ b/tools/test/h5dump/testh5dumppbits.sh.in @@ -236,26 +236,25 @@ TOOLTEST() { cp $actual_err $actual_err_sav STDERR_FILTER $actual_err - if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + if [ ! -f $expect ]; then + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual; then - echo " PASSED" + echo " PASSED" else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav $actual_ext + rm -f $actual $actual_err $actual_sav $actual_err_sav $actual_ext fi - } @@ -274,36 +273,36 @@ TOOLTEST2() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" - elif $CMP $expect $actual; then - if [ ! -f $expectdata ]; then - # Create the expect data file if it doesn't yet exist. + # Create the expect file if it doesn't yet exist. echo " CREATED" - cp $actualdata $expectdata - echo " Expected data (*.exp) missing" + cp $actual $expect + echo " Expected result (*.ddl) missing" nerrors="`expr $nerrors + 1`" - elif $CMP $expectdata $actualdata; then - echo " PASSED" - else + elif $CMP $expect $actual; then + if [ ! -f $expectdata ]; then + # Create the expect data file if it doesn't yet exist. + echo " CREATED" + cp $actualdata $expectdata + echo " Expected data (*.exp) missing" + nerrors="`expr $nerrors + 1`" + elif $CMP $expectdata $actualdata; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' + fi + else echo "*FAILED*" - echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" + echo " Expected result (*.ddl) differs from actual result (*.out)" nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' - fi - else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file @@ -328,8 +327,8 @@ TOOLTEST3() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err # save actual and actual_err in case they are needed later. @@ -348,23 +347,23 @@ TOOLTEST3() { $actual_err > $actual_ext if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual; then - echo " PASSED" + echo " PASSED" else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav + rm -f $actual $actual_err $actual_sav $actual_err_sav fi } @@ -385,8 +384,8 @@ TOOLTEST4() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err # save actual and actual_err in case they are needed later. @@ -405,30 +404,30 @@ TOOLTEST4() { $actual_err > $actual_ext if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual; then - if $CMP $expect_err $actual_ext; then - echo " PASSED" - else - echo "*FAILED*" - echo " Expected result (*.err) differs from actual result (*.oerr)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect_err $actual_ext |sed 's/^/ /' - fi + if $CMP $expect_err $actual_ext; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected result (*.err) differs from actual result (*.oerr)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect_err $actual_ext |sed 's/^/ /' + fi else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav + rm -f $actual $actual_err $actual_sav $actual_err_sav fi } @@ -442,8 +441,8 @@ SKIP() { # Print a line-line message left justified in a field of 70 characters # PRINT_H5DIFF() { - SPACES=" " - echo " Running h5diff $* $SPACES" | cut -c1-70 | tr -d '\012' + SPACES=" " + echo " Running h5diff $* $SPACES" | cut -c1-70 | tr -d '\012' } @@ -453,10 +452,11 @@ DIFFTEST() { PRINT_H5DIFF $@ ( - cd $TESTDIR - $RUNSERIAL $H5DIFF_BIN "$@" -q + cd $TESTDIR + $RUNSERIAL $H5DIFF_BIN "$@" -q ) RET=$? + if [ $RET != 0 ] ; then echo "*FAILED*" nerrors="`expr $nerrors + 1`" @@ -470,8 +470,8 @@ DIFFTEST() # beginning with the word "Verifying". # PRINT_H5IMPORT() { - SPACES=" " - echo " Running h5import $* $SPACES" | cut -c1-70 | tr -d '\012' + SPACES=" " + echo " Running h5import $* $SPACES" | cut -c1-70 | tr -d '\012' } # Call the h5import tool @@ -481,22 +481,22 @@ IMPORTTEST() # remove the output hdf5 file if it exists hdf5_file="$TESTDIR/$5" if [ -f $hdf5_file ]; then - rm -f $hdf5_file + rm -f $hdf5_file fi PRINT_H5IMPORT $@ ( - cd $TESTDIR - $RUNSERIAL $H5IMPORT_BIN "$@" + cd $TESTDIR + $RUNSERIAL $H5IMPORT_BIN "$@" ) RET=$? + if [ $RET != 0 ] ; then echo "*FAILED*" nerrors="`expr $nerrors + 1`" else echo " PASSED" fi - } diff --git a/tools/test/h5dump/testh5dumpvds.sh.in b/tools/test/h5dump/testh5dumpvds.sh.in index f89234e..29ff238 100644 --- a/tools/test/h5dump/testh5dumpvds.sh.in +++ b/tools/test/h5dump/testh5dumpvds.sh.in @@ -205,8 +205,8 @@ TOOLTEST() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err # save actual and actual_err in case they are needed later. @@ -216,26 +216,25 @@ TOOLTEST() { STDERR_FILTER $actual_err cat $actual_err >> $actual - if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + if [ ! -f $expect ]; then + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual; then - echo " PASSED" + echo " PASSED" else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav $actual_ext + rm -f $actual $actual_err $actual_sav $actual_err_sav $actual_ext fi - } @@ -254,42 +253,42 @@ TOOLTEST2() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err cat $actual_err >> $actual if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" - elif $CMP $expect $actual; then - if [ ! -f $expectdata ]; then - # Create the expect data file if it doesn't yet exist. + # Create the expect file if it doesn't yet exist. echo " CREATED" - cp $actualdata $expectdata - echo " Expected data (*.exp) missing" + cp $actual $expect + echo " Expected result (*.ddl) missing" nerrors="`expr $nerrors + 1`" - elif $CMP $expectdata $actualdata; then - echo " PASSED" - else + elif $CMP $expect $actual; then + if [ ! -f $expectdata ]; then + # Create the expect data file if it doesn't yet exist. + echo " CREATED" + cp $actualdata $expectdata + echo " Expected data (*.exp) missing" + nerrors="`expr $nerrors + 1`" + elif $CMP $expectdata $actualdata; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' + fi + else echo "*FAILED*" - echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" + echo " Expected result (*.ddl) differs from actual result (*.out)" nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' - fi - else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actualdata $actual_err + rm -f $actual $actualdata $actual_err fi } @@ -309,8 +308,8 @@ TOOLTEST3() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err # save actual and actual_err in case they are needed later. @@ -326,27 +325,27 @@ TOOLTEST3() { -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ -e 's/H5Eget_auto[1-2]*/H5Eget_auto(1 or 2)/' \ -e 's/H5Eset_auto[1-2]*/H5Eset_auto(1 or 2)/' \ - $actual_err > $actual_ext + $actual_err > $actual_ext cat $actual_ext >> $actual if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual; then - echo " PASSED" + echo " PASSED" else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav + rm -f $actual $actual_err $actual_sav $actual_err_sav fi } @@ -367,8 +366,8 @@ TOOLTEST4() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err # save actual and actual_err in case they are needed later. @@ -384,47 +383,46 @@ TOOLTEST4() { -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ -e 's/H5Eget_auto[1-2]*/H5Eget_auto(1 or 2)/' \ -e 's/H5Eset_auto[1-2]*/H5Eset_auto(1 or 2)/' \ - $actual_err > $actual_ext + $actual_err > $actual_ext #cat $actual_ext >> $actual if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect elif $CMP $expect $actual; then - if $CMP $expect_err $actual_ext; then - echo " PASSED" - else - echo "*FAILED*" - echo " Expected result (*.err) differs from actual result (*.oerr)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect_err $actual_ext |sed 's/^/ /' - fi + if $CMP $expect_err $actual_ext; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected result (*.err) differs from actual result (*.oerr)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect_err $actual_ext |sed 's/^/ /' + fi else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav + rm -f $actual $actual_err $actual_sav $actual_err_sav fi - } # Print a "SKIP" message SKIP() { - TESTING $DUMPER $@ + TESTING $DUMPER $@ echo " -SKIP-" } # Print a line-line message left justified in a field of 70 characters # PRINT_H5DIFF() { - SPACES=" " - echo " Running h5diff $* $SPACES" | cut -c1-70 | tr -d '\012' + SPACES=" " + echo " Running h5diff $* $SPACES" | cut -c1-70 | tr -d '\012' } @@ -434,25 +432,25 @@ DIFFTEST() { PRINT_H5DIFF $@ ( - cd $TESTDIR - $RUNSERIAL $H5DIFF_BIN "$@" -q + cd $TESTDIR + $RUNSERIAL $H5DIFF_BIN "$@" -q ) RET=$? + if [ $RET != 0 ] ; then echo "*FAILED*" nerrors="`expr $nerrors + 1`" else echo " PASSED" fi - } # Print a line-line message left justified in a field of 70 characters # beginning with the word "Verifying". # PRINT_H5IMPORT() { - SPACES=" " - echo " Running h5import $* $SPACES" | cut -c1-70 | tr -d '\012' + SPACES=" " + echo " Running h5import $* $SPACES" | cut -c1-70 | tr -d '\012' } # Call the h5import tool @@ -462,22 +460,22 @@ IMPORTTEST() # remove the output hdf5 file if it exists hdf5_file="$TESTDIR/$5" if [ -f $hdf5_file ]; then - rm -f $hdf5_file + rm -f $hdf5_file fi PRINT_H5IMPORT $@ ( - cd $TESTDIR - $RUNSERIAL $H5IMPORT_BIN "$@" + cd $TESTDIR + $RUNSERIAL $H5IMPORT_BIN "$@" ) RET=$? + if [ $RET != 0 ] ; then echo "*FAILED*" nerrors="`expr $nerrors + 1`" else echo " PASSED" fi - } @@ -491,7 +489,7 @@ COPY_TESTFILES_TO_TESTDIR ####### test for dataset vds ###### - # Data read +# Data read if test $USE_FILTER_DEFLATE = "yes" ; then TOOLTEST tvds-1.ddl --enable-error-stack 1_vds.h5 TOOLTEST tvds-2.ddl --enable-error-stack 2_vds.h5 @@ -504,7 +502,7 @@ if test $USE_FILTER_DEFLATE = "yes" ; then TOOLTEST vds-gap2.ddl --vds-gap-size=2 --enable-error-stack vds-eiger.h5 fi - # Layout read +# Layout read if test $USE_FILTER_DEFLATE = "yes" ; then TOOLTEST tvds_layout-1.ddl -p --enable-error-stack 1_vds.h5 TOOLTEST tvds_layout-2.ddl -p --enable-error-stack 2_vds.h5 diff --git a/tools/test/h5dump/testh5dumpxml.sh.in b/tools/test/h5dump/testh5dumpxml.sh.in index f7af300..52a13c2 100644 --- a/tools/test/h5dump/testh5dumpxml.sh.in +++ b/tools/test/h5dump/testh5dumpxml.sh.in @@ -262,36 +262,35 @@ TOOLTEST() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err - if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.xml) missing" - nerrors="`expr $nerrors + 1`" + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.xml) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual; then - echo " PASSED" + echo " PASSED" else - echo "*FAILED*" - echo " Expected result (*.xml) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.xml) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err + rm -f $actual $actual_err fi } # Print a "SKIP" message SKIP() { - TESTING $DUMPER $@ - echo " -SKIP-" + TESTING $DUMPER $@ + echo " -SKIP-" } diff --git a/tools/test/h5jam/tellub.c b/tools/test/h5jam/tellub.c index e7bb561..453444d 100644 --- a/tools/test/h5jam/tellub.c +++ b/tools/test/h5jam/tellub.c @@ -71,6 +71,7 @@ parse_command_line (int argc, const char *argv[]) case 'h': usage (h5tools_getprogname()); h5tools_setstatus(EXIT_SUCCESS); + break; case '?': default: usage (h5tools_getprogname()); @@ -105,7 +106,7 @@ int main (int argc, const char *argv[]) { char *ifname; - hid_t ifile; + hid_t ifile = H5I_INVALID_HID; hsize_t usize; htri_t testval; herr_t status; @@ -165,7 +166,8 @@ main (int argc, const char *argv[]) done: H5Pclose (plist); - H5Fclose (ifile); + if(ifile >= 0) + H5Fclose (ifile); leave(h5tools_getstatus()); } /* end main() */ diff --git a/tools/test/h5ls/h5ls_plugin.sh.in b/tools/test/h5ls/h5ls_plugin.sh.in index c89269d..28370e6 100644 --- a/tools/test/h5ls/h5ls_plugin.sh.in +++ b/tools/test/h5ls/h5ls_plugin.sh.in @@ -139,8 +139,8 @@ CLEAN_TESTFILES_AND_TESTDIR() # Print a $* message left justified in a field of 70 characters # MESSAGE() { - SPACES=" " - echo "$* $SPACES" | cut -c1-70 | tr -d '\012' + SPACES=" " + echo "$* $SPACES" | cut -c1-70 | tr -d '\012' } # Print a line-line message left justified in a field of 70 characters @@ -206,7 +206,7 @@ TOOLTEST() { echo "" fi elif [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. + # Create the expect file if it doesn't yet exist. echo " CREATED" cp $actual $expect echo " Expected result (*.ls) missing" diff --git a/tools/test/h5repack/CMakeTests.cmake b/tools/test/h5repack/CMakeTests.cmake index 4823d07..af73b75 100644 --- a/tools/test/h5repack/CMakeTests.cmake +++ b/tools/test/h5repack/CMakeTests.cmake @@ -72,6 +72,14 @@ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_paged_persist.h5 # h5diff/testfile ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_attr1.h5 + # tools/testfiles for external links + ${HDF5_TOOLS_DIR}/testfiles/tsoftlinks.h5 + ${HDF5_TOOLS_DIR}/testfiles/textlinkfar.h5 + ${HDF5_TOOLS_DIR}/testfiles/textlinksrc.h5 + ${HDF5_TOOLS_DIR}/testfiles/textlinktar.h5 + ${HDF5_TOOLS_DIR}/testfiles/textlink.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5copy_extlinks_src.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5copy_extlinks_trg.h5 # tools/testfiles ${HDF5_TOOLS_DIR}/testfiles/tfamily00000.h5 ${HDF5_TOOLS_DIR}/testfiles/tfamily00001.h5 @@ -128,6 +136,13 @@ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/plugin_version_test.h5repack_layout.h5 ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/plugin_zero.h5repack_layout.h5 ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/plugin_none.h5repack_layout.UD.h5 + # tools/testfiles for external links + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/tsoftlinks-merge.tsoftlinks.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/textlinkfar-merge.textlinkfar.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/textlinksrc-merge.textlinksrc.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/textlinktar-merge.textlinktar.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/textlink-merge.textlink.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5copy_extlinks_src-merge.h5copy_extlinks_src.h5 ) set (LIST_DDL_TEST_FILES @@ -154,6 +169,25 @@ # refs ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/attrregion.tattrreg.h5 ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/dataregion.tdatareg.h5 + # tools/testfiles for external links + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/textlinkfar-base.textlinkfar.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/textlinksrc-base.textlinksrc.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/textlinktar-base.textlinktar.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/textlink-base.textlink.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/tsoftlinks-base.tsoftlinks.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5copy_extlinks_src-base.h5copy_extlinks_src.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/textlinkfar-prune.textlinkfar.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/textlinksrc-prune.textlinksrc.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/textlinktar-prune.textlinktar.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/textlink-prune.textlink.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/tsoftlinks-prune.tsoftlinks.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5copy_extlinks_src-prune.h5copy_extlinks_src.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/textlinkfar-mergeprune.textlinkfar.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/textlinksrc-mergeprune.textlinksrc.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/textlinktar-mergeprune.textlinktar.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/textlink-mergeprune.textlink.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/tsoftlinks-mergeprune.tsoftlinks.h5 + ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5copy_extlinks_src-mergeprune.h5copy_extlinks_src.h5 ) foreach (h5_file ${LIST_HDF5_TEST_FILES}) @@ -276,7 +310,7 @@ endif () endmacro () - macro (ADD_H5_CMP_TEST testname testfilter testtype resultcode resultfile) + macro (ADD_H5_FILTER_TEST testname testfilter testtype resultcode resultfile) if ("${testtype}" STREQUAL "SKIP") if (NOT HDF5_ENABLE_USING_MEMCHECKER) add_test ( @@ -410,6 +444,48 @@ endif () endmacro () + macro (ADD_H5_DIFF_TEST testname testtype resultcode testfile) + if ("${testtype}" STREQUAL "SKIP") + if (NOT HDF5_ENABLE_USING_MEMCHECKER) + add_test ( + NAME H5REPACK_DIFF-${testname} + COMMAND ${CMAKE_COMMAND} -E echo "SKIP ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${testfile}" + ) + set_property(TEST H5REPACK_DIFF-${testname} PROPERTY DISABLED) + endif () + else () + add_test ( + NAME H5REPACK_DIFF-${testname}-clear-objects + COMMAND ${CMAKE_COMMAND} -E remove testfiles/out-${testname}.${testfile} + ) + set_tests_properties (H5REPACK_DIFF-${testname}-clear-objects PROPERTIES + FIXTURES_REQUIRED clear_h5repack + ) + add_test ( + NAME H5REPACK_DIFF-${testname} + COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:h5repack${tgt_file_ext}> --enable-error-stack ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${testfile} + ) + set_tests_properties (H5REPACK_DIFF-${testname} PROPERTIES + DEPENDS H5REPACK_DIFF-${testname}-clear-objects + ) + add_test ( + NAME H5REPACK_DIFF-${testname}_DFF + COMMAND "${CMAKE_COMMAND}" + -D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}" + -D "TEST_PROGRAM=$<TARGET_FILE:h5diff${tgt_file_ext}>" + -D "TEST_ARGS:STRING=-v;--enable-error-stack;${testfile};out-${testname}.${testfile}" + -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles" + -D "TEST_OUTPUT=out-${testname}.${testfile}.out" + -D "TEST_EXPECT=${resultcode}" + -D "TEST_REFERENCE=${testname}.${testfile}.tst" + -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" + ) + set_tests_properties (H5REPACK_DIFF-${testname}_DFF PROPERTIES + DEPENDS H5REPACK_DIFF-${testname} + ) + endif () + endmacro () + macro (ADD_H5_STAT_TEST testname testtype resultcode statarg resultfile) if ("${testtype}" STREQUAL "SKIP") if (NOT HDF5_ENABLE_USING_MEMCHECKER) @@ -1148,7 +1224,7 @@ if (NOT USE_FILTER_DEFLATE) set (TESTTYPE "SKIP") endif () - ADD_H5_CMP_TEST (gzip_verbose_filters "O?...ing file[^\n]+\n" ${TESTTYPE} 0 ${arg}) + ADD_H5_FILTER_TEST (gzip_verbose_filters "O?...ing file[^\n]+\n" ${TESTTYPE} 0 ${arg}) ########################################################### # the following tests assume the input files have filters @@ -1540,6 +1616,44 @@ ADD_H5_EXTERNAL_TEST (ext_int32le_3d "TEST" int32le_3d -l CONTI) ADD_H5_EXTERNAL_TEST (ext_uint8be "TEST" uint8be -l CONTI) ############################################################################## +### E X T E R N A L L I N K T E S T S +############################################################################## +### HDFFV-11128 needs fixed to enable the following test +#ADD_H5_DMP_TEST (h5copy_extlinks_src-base "TEST" 0 h5copy_extlinks_src.h5 --enable-error-stack) +ADD_H5_DMP_TEST (tsoftlinks-base "TEST" 0 tsoftlinks.h5 --enable-error-stack) +ADD_H5_DMP_TEST (textlink-base "TEST" 0 textlink.h5 --enable-error-stack) +ADD_H5_DMP_TEST (textlinkfar-base "TEST" 0 textlinkfar.h5 --enable-error-stack) +ADD_H5_DMP_TEST (textlinksrc-base "TEST" 0 textlinksrc.h5 --enable-error-stack) +ADD_H5_DMP_TEST (textlinktar-base "TEST" 0 textlinktar.h5 --enable-error-stack) + +ADD_H5_DIFF_TEST (h5copy_extlinks_src-merge "TEST" 0 h5copy_extlinks_src.h5 --merge) +ADD_H5_DIFF_TEST (tsoftlinks-merge "TEST" 1 tsoftlinks.h5 --merge) +ADD_H5_DIFF_TEST (textlink-merge "TEST" 0 textlink.h5 --merge) +### HDFFV-11128 needs fixed to enable the following test +#ADD_H5_DIFF_TEST (textlinkfar-merge "TEST" 1 textlinkfar.h5 --merge) +### HDFFV-11128 needs fixed to enable the following test +#ADD_H5_DIFF_TEST (textlinksrc-merge "TEST" 1 textlinksrc.h5 --merge) +### HDFFV-11128 needs fixed to enable the following test +#ADD_H5_DIFF_TEST (textlinktar-merge "TEST" 1 textlinktar.h5 --merge) + +ADD_H5_DMP_TEST (h5copy_extlinks_src-prune "TEST" 0 h5copy_extlinks_src.h5 --prune --enable-error-stack) +ADD_H5_DMP_TEST (tsoftlinks-prune "TEST" 0 tsoftlinks.h5 --prune --enable-error-stack) +ADD_H5_DMP_TEST (textlink-prune "TEST" 0 textlink.h5 --prune --enable-error-stack) +ADD_H5_DMP_TEST (textlinkfar-prune "TEST" 0 textlinkfar.h5 --prune --enable-error-stack) +ADD_H5_DMP_TEST (textlinksrc-prune "TEST" 0 textlinksrc.h5 --prune --enable-error-stack) +ADD_H5_DMP_TEST (textlinktar-prune "TEST" 0 textlinktar.h5 --prune --enable-error-stack) + +ADD_H5_DMP_TEST (h5copy_extlinks_src-mergeprune "TEST" 0 h5copy_extlinks_src.h5 --merge --prune --enable-error-stack) +ADD_H5_DMP_TEST (tsoftlinks-mergeprune "TEST" 0 tsoftlinks.h5 --merge --prune --enable-error-stack) +ADD_H5_DMP_TEST (textlink-mergeprune "TEST" 0 textlink.h5 --merge --prune --enable-error-stack) +### HDFFV-11128 needs fixed to enable the following test +#ADD_H5_DMP_TEST (textlinkfar-mergeprune "TEST" 0 textlinkfar.h5 --merge --prune --enable-error-stack) +### HDFFV-11128 needs fixed to enable the following test +#ADD_H5_DMP_TEST (textlinksrc-mergeprune "TEST" 0 textlinksrc.h5 --merge --prune --enable-error-stack) +### HDFFV-11128 needs fixed to enable the following test +#ADD_H5_DMP_TEST (textlinktar-mergeprune "TEST" 0 textlinktar.h5 --merge --prune --enable-error-stack) + +############################################################################## ### P L U G I N T E S T S ############################################################################## if (BUILD_SHARED_LIBS) diff --git a/tools/test/h5repack/h5repack.sh.in b/tools/test/h5repack/h5repack.sh.in index 5a032cb..a95a22e 100644 --- a/tools/test/h5repack/h5repack.sh.in +++ b/tools/test/h5repack/h5repack.sh.in @@ -92,10 +92,18 @@ $SRC_H5REPACK_TESTFILES/h5repack_attr_refs.h5 $SRC_H5REPACK_TESTFILES/h5repack_deflate.h5 $SRC_H5REPACK_TESTFILES/h5repack_early.h5 $SRC_H5REPACK_TESTFILES/h5repack_ext.h5 +$SRC_H5REPACK_TESTFILES/h5repack_f32le.h5 +$SRC_H5REPACK_TESTFILES/h5repack_f32le_ex.h5 $SRC_H5REPACK_TESTFILES/h5repack_fill.h5 $SRC_H5REPACK_TESTFILES/h5repack_filters.h5 $SRC_H5REPACK_TESTFILES/h5repack_fletcher.h5 $SRC_H5REPACK_TESTFILES/h5repack_hlink.h5 +$SRC_H5REPACK_TESTFILES/h5repack_int32le_1d.h5 +$SRC_H5REPACK_TESTFILES/h5repack_int32le_1d_ex.h5 +$SRC_H5REPACK_TESTFILES/h5repack_int32le_2d.h5 +$SRC_H5REPACK_TESTFILES/h5repack_int32le_2d_ex.h5 +$SRC_H5REPACK_TESTFILES/h5repack_int32le_3d.h5 +$SRC_H5REPACK_TESTFILES/h5repack_int32le_3d_ex.h5 $SRC_H5REPACK_TESTFILES/h5repack_layout.h5 $SRC_H5REPACK_TESTFILES/h5repack_layouto.h5 $SRC_H5REPACK_TESTFILES/h5repack_layout2.h5 @@ -109,23 +117,26 @@ $SRC_H5REPACK_TESTFILES/h5repack_refs.h5 $SRC_H5REPACK_TESTFILES/h5repack_shuffle.h5 $SRC_H5REPACK_TESTFILES/h5repack_soffset.h5 $SRC_H5REPACK_TESTFILES/h5repack_szip.h5 +$SRC_H5REPACK_TESTFILES/h5repack_uint8be.h5 +$SRC_H5REPACK_TESTFILES/h5repack_uint8be_ex.h5 +########fsm#files######## $SRC_H5REPACK_TESTFILES/h5repack_aggr.h5 $SRC_H5REPACK_TESTFILES/h5repack_fsm_aggr_nopersist.h5 $SRC_H5REPACK_TESTFILES/h5repack_fsm_aggr_persist.h5 $SRC_H5REPACK_TESTFILES/h5repack_none.h5 $SRC_H5REPACK_TESTFILES/h5repack_paged_nopersist.h5 $SRC_H5REPACK_TESTFILES/h5repack_paged_persist.h5 -$SRC_H5REPACK_TESTFILES/h5repack_f32le.h5 -$SRC_H5REPACK_TESTFILES/h5repack_f32le_ex.h5 -$SRC_H5REPACK_TESTFILES/h5repack_int32le_1d.h5 -$SRC_H5REPACK_TESTFILES/h5repack_int32le_1d_ex.h5 -$SRC_H5REPACK_TESTFILES/h5repack_int32le_2d.h5 -$SRC_H5REPACK_TESTFILES/h5repack_int32le_2d_ex.h5 -$SRC_H5REPACK_TESTFILES/h5repack_int32le_3d.h5 -$SRC_H5REPACK_TESTFILES/h5repack_int32le_3d_ex.h5 -$SRC_H5REPACK_TESTFILES/h5repack_uint8be.h5 -$SRC_H5REPACK_TESTFILES/h5repack_uint8be_ex.h5 +########h5diff/testfile######## $SRC_H5DIFF_TESTFILES/h5diff_attr1.h5 +########tools/testfiles#for#external#links######## +$SRC_TOOLS_TESTFILES/tsoftlinks.h5 +$SRC_TOOLS_TESTFILES/textlinkfar.h5 +$SRC_TOOLS_TESTFILES/textlinksrc.h5 +$SRC_TOOLS_TESTFILES/textlinktar.h5 +$SRC_TOOLS_TESTFILES/textlink.h5 +$SRC_H5REPACK_TESTFILES/h5copy_extlinks_src.h5 +$SRC_H5REPACK_TESTFILES/h5copy_extlinks_trg.h5 +########tools/testfiles######## $SRC_TOOLS_TESTFILES/tfamily00000.h5 $SRC_TOOLS_TESTFILES/tfamily00001.h5 $SRC_TOOLS_TESTFILES/tfamily00002.h5 @@ -138,6 +149,8 @@ $SRC_TOOLS_TESTFILES/tfamily00008.h5 $SRC_TOOLS_TESTFILES/tfamily00009.h5 $SRC_TOOLS_TESTFILES/tfamily00010.h5 $SRC_TOOLS_TESTFILES/tordergr.h5 +########reference#conversion#files######## +########tools/testfiles/vds######## $SRC_TOOLS_TESTFILES/vds/1_a.h5 $SRC_TOOLS_TESTFILES/vds/1_b.h5 $SRC_TOOLS_TESTFILES/vds/1_c.h5 @@ -168,33 +181,73 @@ $SRC_H5REPACK_TESTFILES/h5repack-help.txt $SRC_H5REPACK_TESTFILES/h5repack_ext.bin $SRC_H5REPACK_TESTFILES/ublock.bin $SRC_H5REPACK_TESTFILES/h5repack.info -$SRC_H5REPACK_TESTFILES/crtorder.tordergr.h5.ddl -$SRC_H5REPACK_TESTFILES/deflate_limit.h5repack_layout.h5.ddl +########dat#files######## $SRC_H5REPACK_TESTFILES/h5repack_f32le_ex-0.dat $SRC_H5REPACK_TESTFILES/h5repack_int32le_1d_ex-0.dat $SRC_H5REPACK_TESTFILES/h5repack_int32le_1d_ex-1.dat $SRC_H5REPACK_TESTFILES/h5repack_int32le_2d_ex-0.dat $SRC_H5REPACK_TESTFILES/h5repack_int32le_3d_ex-0.dat -$SRC_H5REPACK_TESTFILES/h5repack_layout.h5.ddl -$SRC_H5REPACK_TESTFILES/h5repack_filters.h5-gzip_verbose_filters.tst -$SRC_H5REPACK_TESTFILES/h5repack_layout.h5-dset2_chunk_20x10-errstk.tst -$SRC_H5REPACK_TESTFILES/h5repack_layout.h5-plugin_test.ddl $SRC_H5REPACK_TESTFILES/h5repack_uint8be_ex-0.dat $SRC_H5REPACK_TESTFILES/h5repack_uint8be_ex-1.dat $SRC_H5REPACK_TESTFILES/h5repack_uint8be_ex-2.dat $SRC_H5REPACK_TESTFILES/h5repack_uint8be_ex-3.dat -$SRC_H5REPACK_TESTFILES/plugin_test.h5repack_layout.h5.tst -$SRC_H5REPACK_TESTFILES/1_vds.h5-vds_dset_chunk20x10x5-v.ddl -$SRC_H5REPACK_TESTFILES/2_vds.h5-vds_chunk3x6x9-v.ddl -$SRC_H5REPACK_TESTFILES/3_1_vds.h5-vds_chunk2x5x8-v.ddl -$SRC_H5REPACK_TESTFILES/4_vds.h5-vds_compa-v.ddl -$SRC_H5REPACK_TESTFILES/4_vds.h5-vds_conti-v.ddl +############### +$SRC_H5REPACK_TESTFILES/crtorder.tordergr.h5.ddl +$SRC_H5REPACK_TESTFILES/deflate_limit.h5repack_layout.h5.ddl +$SRC_H5REPACK_TESTFILES/h5repack_layout.h5.ddl +$SRC_H5REPACK_TESTFILES/h5repack_layout.h5-plugin_test.ddl +########fsm#files######## $SRC_H5REPACK_TESTFILES/SP.h5repack_fsm_aggr_nopersist.h5.ddl $SRC_H5REPACK_TESTFILES/S.h5repack_fsm_aggr_persist.h5.ddl $SRC_H5REPACK_TESTFILES/STG.h5repack_none.h5.ddl $SRC_H5REPACK_TESTFILES/GS.h5repack_paged_nopersist.h5.ddl $SRC_H5REPACK_TESTFILES/SP.h5repack_paged_persist.h5.ddl $SRC_H5REPACK_TESTFILES/SPT.h5repack_aggr.h5.ddl +########vds#files######## +$SRC_H5REPACK_TESTFILES/1_vds.h5-vds_dset_chunk20x10x5-v.ddl +$SRC_H5REPACK_TESTFILES/2_vds.h5-vds_chunk3x6x9-v.ddl +$SRC_H5REPACK_TESTFILES/3_1_vds.h5-vds_chunk2x5x8-v.ddl +$SRC_H5REPACK_TESTFILES/4_vds.h5-vds_compa-v.ddl +$SRC_H5REPACK_TESTFILES/4_vds.h5-vds_conti-v.ddl +########refs#files######## +$SRC_H5REPACK_TESTFILES/attrregion.tattrreg.h5.ddl +$SRC_H5REPACK_TESTFILES/dataregion.tdatareg.h5.ddl +########external#links#files######## +$SRC_H5REPACK_TESTFILES/textlinkfar-base.textlinkfar.h5.ddl +$SRC_H5REPACK_TESTFILES/textlinksrc-base.textlinksrc.h5.ddl +$SRC_H5REPACK_TESTFILES/textlinktar-base.textlinktar.h5.ddl +$SRC_H5REPACK_TESTFILES/textlink-base.textlink.h5.ddl +$SRC_H5REPACK_TESTFILES/tsoftlinks-base.tsoftlinks.h5.ddl +$SRC_H5REPACK_TESTFILES/h5copy_extlinks_src-base.h5copy_extlinks_src.h5.ddl +$SRC_H5REPACK_TESTFILES/textlinkfar-merge.textlinkfar.h5.tst +$SRC_H5REPACK_TESTFILES/textlinksrc-merge.textlinksrc.h5.tst +$SRC_H5REPACK_TESTFILES/textlinktar-merge.textlinktar.h5.tst +$SRC_H5REPACK_TESTFILES/textlink-merge.textlink.h5.tst +$SRC_H5REPACK_TESTFILES/tsoftlinks-merge.tsoftlinks.h5.tst +$SRC_H5REPACK_TESTFILES/h5copy_extlinks_src-merge.h5copy_extlinks_src.h5.tst +$SRC_H5REPACK_TESTFILES/textlinkfar-prune.textlinkfar.h5.ddl +$SRC_H5REPACK_TESTFILES/textlinksrc-prune.textlinksrc.h5.ddl +$SRC_H5REPACK_TESTFILES/textlinktar-prune.textlinktar.h5.ddl +$SRC_H5REPACK_TESTFILES/textlink-prune.textlink.h5.ddl +$SRC_H5REPACK_TESTFILES/tsoftlinks-prune.tsoftlinks.h5.ddl +$SRC_H5REPACK_TESTFILES/h5copy_extlinks_src-prune.h5copy_extlinks_src.h5.ddl +$SRC_H5REPACK_TESTFILES/textlinkfar-mergeprune.textlinkfar.h5.ddl +$SRC_H5REPACK_TESTFILES/textlinksrc-mergeprune.textlinksrc.h5.ddl +$SRC_H5REPACK_TESTFILES/textlinktar-mergeprune.textlinktar.h5.ddl +$SRC_H5REPACK_TESTFILES/textlink-mergeprune.textlink.h5.ddl +$SRC_H5REPACK_TESTFILES/tsoftlinks-mergeprune.tsoftlinks.h5.ddl +$SRC_H5REPACK_TESTFILES/h5copy_extlinks_src-mergeprune.h5copy_extlinks_src.h5.ddl +########tst#files######## +$SRC_H5REPACK_TESTFILES/h5repack_filters.h5-gzip_verbose_filters.tst +$SRC_H5REPACK_TESTFILES/h5repack_layout.h5-dset2_chunk_20x10-errstk.tst +$SRC_H5REPACK_TESTFILES/plugin_test.h5repack_layout.h5.tst +########external#links#tst#files######## +$SRC_H5REPACK_TESTFILES/tsoftlinks-merge.tsoftlinks.h5.tst +$SRC_H5REPACK_TESTFILES/textlinkfar-merge.textlinkfar.h5.tst +$SRC_H5REPACK_TESTFILES/textlinksrc-merge.textlinksrc.h5.tst +$SRC_H5REPACK_TESTFILES/textlinktar-merge.textlinktar.h5.tst +$SRC_H5REPACK_TESTFILES/textlink-merge.textlink.h5.tst +$SRC_H5REPACK_TESTFILES/h5copy_extlinks_src-merge.h5copy_extlinks_src.h5.tst " # @@ -271,6 +324,12 @@ SKIP() { echo " -SKIP-" } +############################################################################## +############################################################################## +### T H E T E S T S M A C R O S ### +############################################################################## +############################################################################## + # Call the h5diff tool # DIFFTEST() @@ -620,6 +679,7 @@ VERIFY_INVALIDBOUNDS() # ----------------------------------------------------------------------------- # Expect h5diff to fail +# Use only by VERIFY_EXTERNAL_CONSOLIDATION # ----------------------------------------------------------------------------- DIFFFAIL() { @@ -805,6 +865,121 @@ TOOLTESTV() rm -f $outfile } +# This is same as TOOLTESTV() with comparing display output +# with actual filename swapped +# +TOOLTESTSV() +{ + expect="$TESTDIR/$1.$2.tst" + actual="$TESTDIR/`basename $2 .ddl`.out" + actual_err="$TESTDIR/`basename $2 .ddl`.err" + + infile=$2 + outfile=out-$1.$2 + shift + shift + + # Run test. + TESTING $H5REPACK $@ + ( + cd $TESTDIR + $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile + ) >$actual 2>$actual_err + RET=$? + if [ $RET != 0 ] ; then + echo "*FAILED*" + nerrors="`expr $nerrors + 1`" + else + echo " PASSED" + VERIFY h5diff equal $@ + ( + cd $TESTDIR + $RUNSERIAL $H5DIFF_BIN -v $infile $outfile + ) >$actual 2>$actual_err + RET=$? + if [ $RET != 0 ] ; then + echo "*FAILED*" + nerrors="`expr $nerrors + 1`" + else + echo " PASSED" + fi + fi + + # display output compare + STDOUT_FILTER $actual + cat $actual_err >> $actual + + VERIFY output from $H5REPACK $@ + if cmp -s $expect $actual; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected result (*.tst) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && diff -c $expect $actual |sed 's/^/ /' + fi + + rm -f $actual $actual_err + rm -f $outfile +} + +# This is same as TOOLTESTSV() but expects a diff fail +# +TOOLFAILSV() +{ + expect="$TESTDIR/$1.$2.tst" + actual="$TESTDIR/`basename $2 .ddl`.out" + actual_err="$TESTDIR/`basename $2 .ddl`.err" + + infile=$2 + outfile=out-$1.$2 + shift + shift + + # Run test. + TESTING $H5REPACK $@ + ( + cd $TESTDIR + $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile + ) >$actual 2>$actual_err + RET=$? + if [ $RET != 0 ] ; then + echo "*FAILED*" + nerrors="`expr $nerrors + 1`" + else + echo " PASSED" + VERIFY h5diff unequal $@ + ( + cd $TESTDIR + $RUNSERIAL $H5DIFF_BIN -v $infile $outfile + ) >$actual 2>$actual_err + RET=$? + if [ $RET == 0 ] ; then + echo "*FAILED*" + nerrors="`expr $nerrors + 1`" + else + echo " PASSED" + fi + fi + + # display output compare + STDOUT_FILTER $actual + cat $actual_err >> $actual + + VERIFY output from $H5REPACK $@ + if cmp -s $expect $actual; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected result (*.tst) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && diff -c $expect $actual |sed 's/^/ /' + fi + + rm -f $actual $actual_err + rm -f $outfile +} + # same as TOOLTESTV but filters error stack output and compares to an error file # Extract file name, line number, version and thread IDs because they may be different # ADD_H5ERR_MASK_TEST @@ -1356,44 +1531,28 @@ TOOLTEST_STAT SPT $arg # layout options (these files have no filters) ######################################################### VERIFY_LAYOUT_DSET dset2_chunk_20x10 h5repack_layout.h5 dset2 CHUNKED --layout dset2:CHUNK=20x10 - VERIFY_LAYOUT_ALL chunk_20x10 h5repack_layout.h5 CHUNKED -l CHUNK=20x10 - VERIFY_LAYOUT_DSET dset2_conti h5repack_layout.h5 dset2 CONTIGUOUS -l dset2:CONTI - VERIFY_LAYOUT_ALL conti h5repack_layout.h5 CONTIGUOUS -l CONTI - VERIFY_LAYOUT_DSET dset2_compa h5repack_layout.h5 dset2 COMPACT -l dset2:COMPA - VERIFY_LAYOUT_ALL compa h5repack_layout.h5 COMPACT -l COMPA - TOOLTESTM dset2_chunk_20x10-errstk h5repack_layout.h5 --layout=dset2:CHUNK=20x10x5 --enable-error-stack ################################################################ # layout conversions (file has no filters) ############################################################### - VERIFY_LAYOUT_DSET dset_compa_conti h5repack_layout.h5 dset_compact CONTIGUOUS -l dset_compact:CONTI - VERIFY_LAYOUT_DSET dset_compa_chunk h5repack_layout.h5 dset_compact CHUNKED -l dset_compact:CHUNK=2x5 - VERIFY_LAYOUT_DSET dset_compa_compa h5repack_layout.h5 dset_compact COMPACT -l dset_compact:COMPA - VERIFY_LAYOUT_DSET dset_conti_compa h5repack_layout.h5 dset_contiguous COMPACT -l dset_contiguous:COMPA - VERIFY_LAYOUT_DSET dset_conti_chunk h5repack_layout.h5 dset_contiguous CHUNKED -l dset_contiguous:CHUNK=3x6 - VERIFY_LAYOUT_DSET dset_conti_conti h5repack_layout.h5 dset_contiguous CONTIGUOUS -l dset_contiguous:CONTI - VERIFY_LAYOUT_DSET chunk_compa h5repack_layout.h5 dset_chunk COMPACT -l dset_chunk:COMPA - VERIFY_LAYOUT_DSET chunk_conti h5repack_layout.h5 dset_chunk CONTIGUOUS -l dset_chunk:CONTI - VERIFY_LAYOUT_DSET chunk_18x13 h5repack_layout.h5 dset_chunk CHUNKED -l dset_chunk:CHUNK=18x13 # test convert small size dataset ( < 1k) to compact layout without -m VERIFY_LAYOUT_DSET contig_small_compa h5repack_layout2.h5 contig_small COMPACT -l contig_small:COMPA - VERIFY_LAYOUT_DSET contig_small_fixed_compa h5repack_layout2.h5 chunked_small_fixed COMPACT -l chunked_small_fixed:COMPA #--------------------------------------------------------------------------- @@ -1421,6 +1580,7 @@ VERIFY_LAYOUT_DSET chunk2compa h5repack_layout3.h5 chunk_unlimit1 CHUNK -l chunk # chunk dim is bigger than dataset dim. ( dset size < 64k ) VERIFY_LAYOUT_DSET error1 h5repack_layout3.h5 chunk_unlimit1 H5S_UNLIMITED -f chunk_unlimit1:NONE # chunk dim is bigger than dataset dim. ( dset size > 64k ) + VERIFY_LAYOUT_DSET error2 h5repack_layout3.h5 chunk_unlimit2 H5S_UNLIMITED -f chunk_unlimit2:NONE # chunk dims are smaller than dataset dims. ( dset size < 64k ) @@ -1435,7 +1595,6 @@ TOOLTEST error4 h5repack_layout3.h5 -f NONE # (dset size < 64K) and with unlimited max dims on a condition as follow. # (HDFFV-8214) #-------------------------------------------------------------------------- - # chunk dim is bigger than dataset dim. should succeed. VERIFY_LAYOUT_DSET ckdim_biger h5repack_layout3.h5 chunk_unlimit2 CONTI -l chunk_unlimit2:CONTI # chunk dim is smaller than dataset dim. should succeed. @@ -1466,7 +1625,6 @@ else fi # several global filters - arg="h5repack_layout.h5 --filter GZIP=1 --filter SHUF" if test $USE_FILTER_DEFLATE != "yes" ; then SKIP $arg @@ -1562,9 +1720,15 @@ else VERIFY_LAYOUT_VDS vds_conti 4_vds.h5 vds_dset CONTIGUOUS -l vds_dset:CONTI fi -######################################################### -# Testing version bounds -######################################################### +################################################################ +# reference new api conversions +############################################################### +#TOOLTEST_DUMP attrregion tattrreg.h5 +#TOOLTEST_DUMP dataregion tdatareg.h5 + +############################################################################## +### V E R S I O N B O U N D S T E S T S +############################################################################## # -j 0 -k 2, superblock will be 0 VERIFY_SUPERBLOCK 0 2 0 h5repack_layout.h5 -j 0 -k 2 h5repack_layout.h5 # -j 1 -k 2, superblock will be 2 @@ -1574,11 +1738,49 @@ VERIFY_SUPERBLOCK 2 2 3 h5repack_layout.h5 -j 2 -k 2 h5repack_layout.h5 # -j 0 -k 1, file cannot be opened VERIFY_INVALIDBOUNDS 0 1 bounds_latest_latest.h5 -######################################## -# Testing external storage -######################################## +############################################################################## +### E X T E R N A L S T O R A G E T E S T S +############################################################################## VERIFY_EXTERNAL_CONSOLIDATION -l CONTI +############################################################################## +### E X T E R N A L L I N K T E S T S +############################################################################## +### HDFFV-11128 needs fixed to enable the following test +#TOOLTEST_DUMP h5copy_extlinks_src-base h5copy_extlinks_src.h5 --enable-error-stack +TOOLTEST_DUMP tsoftlinks-base tsoftlinks.h5 --enable-error-stack +TOOLTEST_DUMP textlink-base textlink.h5 --enable-error-stack +TOOLTEST_DUMP textlinkfar-base textlinkfar.h5 --enable-error-stack +TOOLTEST_DUMP textlinksrc-base textlinksrc.h5 --enable-error-stack +TOOLTEST_DUMP textlinktar-base textlinktar.h5 --enable-error-stack + +TOOLTESTSV h5copy_extlinks_src-merge h5copy_extlinks_src.h5 --merge +TOOLFAILSV tsoftlinks-merge tsoftlinks.h5 --merge +TOOLTESTSV textlink-merge textlink.h5 --merge +### HDFFV-11128 needs fixed to enable the following test +#TOOLFAILSV textlinkfar-merge textlinkfar.h5 --merge +### HDFFV-11128 needs fixed to enable the following test +#TOOLFAILSV textlinksrc-merge textlinksrc.h5 --merge +### HDFFV-11128 needs fixed to enable the following test +#TOOLFAILSV textlinktar-merge textlinktar.h5 --merge + +TOOLTEST_DUMP h5copy_extlinks_src-prune h5copy_extlinks_src.h5 --prune --enable-error-stack +TOOLTEST_DUMP tsoftlinks-prune tsoftlinks.h5 --prune --enable-error-stack +TOOLTEST_DUMP textlink-prune textlink.h5 --prune --enable-error-stack +TOOLTEST_DUMP textlinkfar-prune textlinkfar.h5 --prune --enable-error-stack +TOOLTEST_DUMP textlinksrc-prune textlinksrc.h5 --prune --enable-error-stack +TOOLTEST_DUMP textlinktar-prune textlinktar.h5 --prune --enable-error-stack + +TOOLTEST_DUMP h5copy_extlinks_src-mergeprune h5copy_extlinks_src.h5 --merge --prune --enable-error-stack +TOOLTEST_DUMP tsoftlinks-mergeprune tsoftlinks.h5 --merge --prune --enable-error-stack +TOOLTEST_DUMP textlink-mergeprune textlink.h5 --merge --prune --enable-error-stack +### HDFFV-11128 needs fixed to enable the following test +#TOOLTEST_DUMP textlinkfar-mergeprune textlinkfar.h5 --merge --prune --enable-error-stack +### HDFFV-11128 needs fixed to enable the following test +#TOOLTEST_DUMP textlinksrc-mergeprune textlinksrc.h5 --merge --prune --enable-error-stack +### HDFFV-11128 needs fixed to enable the following test +#TOOLTEST_DUMP textlinktar-mergeprune textlinktar.h5 --merge --prune --enable-error-stack + # Clean up temporary files/directories CLEAN_TESTFILES_AND_TESTDIR diff --git a/tools/test/h5repack/h5repacktst.c b/tools/test/h5repack/h5repacktst.c index ab0dbb7..2666e95 100644 --- a/tools/test/h5repack/h5repacktst.c +++ b/tools/test/h5repack/h5repacktst.c @@ -3872,7 +3872,7 @@ out: * * Purpose: write datasets in LOC_ID * -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu +* Programmer: Pedro Vicente * * Date: November 12, 2003 * @@ -4736,7 +4736,7 @@ out: * * Purpose: write attributes in LOC_ID (dataset, group, named datatype) * -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu +* Programmer: Pedro Vicente * * Date: November 12, 2003 * @@ -5927,7 +5927,7 @@ out: * * Purpose: utility function to create and write a dataset in LOC_ID * -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu +* Programmer: Pedro Vicente * * Date: November 12, 2003 * @@ -5963,7 +5963,7 @@ out: * * Purpose: utility function to create and write a dataset in LOC_ID * -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu +* Programmer: Pedro Vicente * * Date: November 12, 2003 * @@ -6011,7 +6011,7 @@ out: * * Purpose: utility function to write an attribute in LOC_ID * -* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu +* Programmer: Pedro Vicente * * Date: November 12, 2003 * diff --git a/tools/test/h5repack/testfiles/h5copy_extlinks_src-base.h5copy_extlinks_src.h5.ddl b/tools/test/h5repack/testfiles/h5copy_extlinks_src-base.h5copy_extlinks_src.h5.ddl new file mode 100644 index 0000000..ad8a320 --- /dev/null +++ b/tools/test/h5repack/testfiles/h5copy_extlinks_src-base.h5copy_extlinks_src.h5.ddl @@ -0,0 +1,28 @@ +HDF5 "out-h5copy_extlinks_src-mergeprune.h5copy_extlinks_src.h5" { +GROUP "/" { + GROUP "group_ext" { + DATATYPE "extlink_datatype" H5T_STD_I32LE; + DATASET "extlink_dset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 2200 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + GROUP "extlink_grp" { + } + } +} +} diff --git a/tools/test/h5repack/testfiles/h5copy_extlinks_src-merge.h5copy_extlinks_src.h5.tst b/tools/test/h5repack/testfiles/h5copy_extlinks_src-merge.h5copy_extlinks_src.h5.tst new file mode 100644 index 0000000..52f215d --- /dev/null +++ b/tools/test/h5repack/testfiles/h5copy_extlinks_src-merge.h5copy_extlinks_src.h5.tst @@ -0,0 +1,26 @@ + +file1 file2 +--------------------------------------- + x x / + x x /group_ext + x x /group_ext/extlink_datatype + x x /group_ext/extlink_dset + x x /group_ext/extlink_grp + x x /group_ext/extlink_notyet1 + x x /group_ext/extlink_notyet2 + +group : </> and </> +0 differences found +group : </group_ext> and </group_ext> +0 differences found +Not comparable: </group_ext/extlink_datatype> is of type H5G_UDLINK and </group_ext/extlink_datatype> is of type H5G_TYPE +Not comparable: </group_ext/extlink_dset> is of type H5G_UDLINK and </group_ext/extlink_dset> is of type H5G_DATASET +Not comparable: </group_ext/extlink_grp> is of type H5G_UDLINK and </group_ext/extlink_grp> is of type H5G_GROUP +external link: </group_ext/extlink_notyet1> and </group_ext/extlink_notyet1> +0 differences found +external link: </group_ext/extlink_notyet2> and </group_ext/extlink_notyet2> +0 differences found +-------------------------------- +Some objects are not comparable +-------------------------------- +Use -c for a list of objects without details of differences. diff --git a/tools/test/h5repack/testfiles/h5copy_extlinks_src-mergeprune.h5copy_extlinks_src.h5.ddl b/tools/test/h5repack/testfiles/h5copy_extlinks_src-mergeprune.h5copy_extlinks_src.h5.ddl new file mode 100644 index 0000000..ad8a320 --- /dev/null +++ b/tools/test/h5repack/testfiles/h5copy_extlinks_src-mergeprune.h5copy_extlinks_src.h5.ddl @@ -0,0 +1,28 @@ +HDF5 "out-h5copy_extlinks_src-mergeprune.h5copy_extlinks_src.h5" { +GROUP "/" { + GROUP "group_ext" { + DATATYPE "extlink_datatype" H5T_STD_I32LE; + DATASET "extlink_dset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 2200 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + GROUP "extlink_grp" { + } + } +} +} diff --git a/tools/test/h5repack/testfiles/h5copy_extlinks_src-prune.h5copy_extlinks_src.h5.ddl b/tools/test/h5repack/testfiles/h5copy_extlinks_src-prune.h5copy_extlinks_src.h5.ddl new file mode 100644 index 0000000..b7d7bca --- /dev/null +++ b/tools/test/h5repack/testfiles/h5copy_extlinks_src-prune.h5copy_extlinks_src.h5.ddl @@ -0,0 +1,6 @@ +HDF5 "out-h5copy_extlinks_src-prune.h5copy_extlinks_src.h5" { +GROUP "/" { + GROUP "group_ext" { + } +} +} diff --git a/tools/test/h5repack/testfiles/h5copy_extlinks_src.h5 b/tools/test/h5repack/testfiles/h5copy_extlinks_src.h5 Binary files differnew file mode 100644 index 0000000..7b8621e --- /dev/null +++ b/tools/test/h5repack/testfiles/h5copy_extlinks_src.h5 diff --git a/tools/test/h5repack/testfiles/h5copy_extlinks_trg.h5 b/tools/test/h5repack/testfiles/h5copy_extlinks_trg.h5 Binary files differnew file mode 100644 index 0000000..3a0242d --- /dev/null +++ b/tools/test/h5repack/testfiles/h5copy_extlinks_trg.h5 diff --git a/tools/test/h5repack/testfiles/h5repack-help.txt b/tools/test/h5repack/testfiles/h5repack-help.txt index 00fae24..e12838d 100644 --- a/tools/test/h5repack/testfiles/h5repack-help.txt +++ b/tools/test/h5repack/testfiles/h5repack-help.txt @@ -29,6 +29,9 @@ usage: h5repack [OPTIONS] file1 file2 --high=BOUND The high bound for library release versions to use when creating objects in the file (default is H5F_LIBVER_LATEST) + --merge Follow external soft link recursively and merge data + --prune Do not follow external soft links and remove link + --merge --prune Follow external link, merge data and remove dangling link -c L1, --compact=L1 Maximum number of links in header messages -d L2, --indexed=L2 Minimum number of links in the indexed format -s S[:F], --ssize=S[:F] Shared object header message minimum size diff --git a/tools/test/h5repack/testfiles/textlink-base.textlink.h5.ddl b/tools/test/h5repack/testfiles/textlink-base.textlink.h5.ddl new file mode 100644 index 0000000..b87a17d --- /dev/null +++ b/tools/test/h5repack/testfiles/textlink-base.textlink.h5.ddl @@ -0,0 +1,12 @@ +HDF5 "out-textlink-base.textlink.h5" { +GROUP "/" { + EXTERNAL_LINK "extlink1" { + TARGETFILE "filename" + TARGETPATH "objname" + } + EXTERNAL_LINK "extlink2" { + TARGETFILE "anotherfile" + TARGETPATH "anotherobj" + } +} +} diff --git a/tools/test/h5repack/testfiles/textlink-merge.textlink.h5.tst b/tools/test/h5repack/testfiles/textlink-merge.textlink.h5.tst new file mode 100644 index 0000000..a7ff71d --- /dev/null +++ b/tools/test/h5repack/testfiles/textlink-merge.textlink.h5.tst @@ -0,0 +1,13 @@ + +file1 file2 +--------------------------------------- + x x / + x x /extlink1 + x x /extlink2 + +group : </> and </> +0 differences found +external link: </extlink1> and </extlink1> +0 differences found +external link: </extlink2> and </extlink2> +0 differences found diff --git a/tools/test/h5repack/testfiles/textlink-mergeprune.textlink.h5.ddl b/tools/test/h5repack/testfiles/textlink-mergeprune.textlink.h5.ddl new file mode 100644 index 0000000..7206ae9 --- /dev/null +++ b/tools/test/h5repack/testfiles/textlink-mergeprune.textlink.h5.ddl @@ -0,0 +1,4 @@ +HDF5 "out-textlink-mergeprune.textlink.h5" { +GROUP "/" { +} +} diff --git a/tools/test/h5repack/testfiles/textlink-prune.textlink.h5.ddl b/tools/test/h5repack/testfiles/textlink-prune.textlink.h5.ddl new file mode 100644 index 0000000..83db344 --- /dev/null +++ b/tools/test/h5repack/testfiles/textlink-prune.textlink.h5.ddl @@ -0,0 +1,4 @@ +HDF5 "out-textlink-prune.textlink.h5" { +GROUP "/" { +} +} diff --git a/tools/test/h5repack/testfiles/textlinkfar-base.textlinkfar.h5.ddl b/tools/test/h5repack/testfiles/textlinkfar-base.textlinkfar.h5.ddl new file mode 100644 index 0000000..a5eb497 --- /dev/null +++ b/tools/test/h5repack/testfiles/textlinkfar-base.textlinkfar.h5.ddl @@ -0,0 +1,116 @@ +HDF5 "out-textlinkfar-base.textlinkfar.h5" { +GROUP "/" { + EXTERNAL_LINK "src_file" { + TARGETFILE "textlinksrc.h5" + TARGETPATH "/" + GROUP "/" { + EXTERNAL_LINK "ext2soft_link1" { + TARGETFILE "tsoftlinks.h5" + TARGETPATH "/soft_dset1" + DATASET "/soft_dset1" { + DATATYPE H5T_STD_I32BE + DATASPACE SIMPLE { ( 4, 2 ) / ( 4, 2 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 32 + OFFSET 2848 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + } + EXTERNAL_LINK "ext2softdangle_link1" { + TARGETFILE "tsoftlinks.h5" + TARGETPATH "/soft_dangle" + } + EXTERNAL_LINK "ext_link1" { + TARGETFILE "textlinktar.h5" + TARGETPATH "group" + GROUP "group" { + DATASET "dset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 3136 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + EXTERNAL_LINK "elink_t1" { + TARGETFILE "textlinksrc.h5" + TARGETPATH "/" + GROUP "/" { + HARDLINK "/" + } + } + EXTERNAL_LINK "elink_t2" { + TARGETFILE "textlinksrc.h5" + TARGETPATH "/ext_link4" + } + GROUP "subgroup" { + GROUP "link_to_group" { + HARDLINK "/group" + } + } + } + } + EXTERNAL_LINK "ext_link2" { + TARGETFILE "textlinktar.h5" + TARGETPATH "dset" + DATASET "dset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 3160 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + } + EXTERNAL_LINK "ext_link3" { + TARGETFILE "textlinktar.h5" + TARGETPATH "type" + DATATYPE "type" H5T_STD_I32LE; + } + EXTERNAL_LINK "ext_link4" { + TARGETFILE "textlinktar.h5" + TARGETPATH "group/elink_t2" + } + EXTERNAL_LINK "ext_link5" { + TARGETFILE "textlinktar.h5" + TARGETPATH "empty_group" + GROUP "empty_group" { + } + } + } + } +} +} diff --git a/tools/test/h5repack/testfiles/textlinkfar-merge.textlinkfar.h5.tst b/tools/test/h5repack/testfiles/textlinkfar-merge.textlinkfar.h5.tst new file mode 100644 index 0000000..6673d39 --- /dev/null +++ b/tools/test/h5repack/testfiles/textlinkfar-merge.textlinkfar.h5.tst @@ -0,0 +1,20 @@ + +file1 file2 +--------------------------------------- + x x / + x x /src_file + x /src_file/ext2soft_link1 + x /src_file/ext2softdangle_link1 + x /src_file/ext_link1 + x /src_file/ext_link2 + x /src_file/ext_link3 + x /src_file/ext_link4 + x /src_file/ext_link5 + +group : </> and </> +0 differences found +Not comparable: </src_file> is of type H5G_UDLINK and </src_file> is of type H5G_GROUP +-------------------------------- +Some objects are not comparable +-------------------------------- +Use -c for a list of objects without details of differences. diff --git a/tools/test/h5repack/testfiles/textlinkfar-mergeprune.textlinkfar.h5.ddl b/tools/test/h5repack/testfiles/textlinkfar-mergeprune.textlinkfar.h5.ddl new file mode 100644 index 0000000..7ba3308 --- /dev/null +++ b/tools/test/h5repack/testfiles/textlinkfar-mergeprune.textlinkfar.h5.ddl @@ -0,0 +1,152 @@ +HDF5 "out-textlinkfar-mergeprune.textlinkfar.h5" { +GROUP "/" { + GROUP "src_file" { + EXTERNAL_LINK "ext2soft_link1" { + TARGETFILE "tsoftlinks.h5" + TARGETPATH "/soft_dset1" + DATASET "/soft_dset1" { + DATATYPE H5T_STD_I32BE + DATASPACE SIMPLE { ( 4, 2 ) / ( 4, 2 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 32 + OFFSET 2848 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + } + EXTERNAL_LINK "ext2softdangle_link1" { + TARGETFILE "tsoftlinks.h5" + TARGETPATH "/soft_dangle" + } + EXTERNAL_LINK "ext_link1" { + TARGETFILE "textlinktar.h5" + TARGETPATH "group" + GROUP "group" { + DATASET "dset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 3136 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + EXTERNAL_LINK "elink_t1" { + TARGETFILE "textlinksrc.h5" + TARGETPATH "/" + GROUP "/" { + EXTERNAL_LINK "ext2soft_link1" { + TARGETFILE "tsoftlinks.h5" + TARGETPATH "/soft_dset1" + DATASET "/soft_dset1" { + HARDLINK "/dset1" + } + } + EXTERNAL_LINK "ext2softdangle_link1" { + TARGETFILE "tsoftlinks.h5" + TARGETPATH "/soft_dangle" + } + EXTERNAL_LINK "ext_link1" { + TARGETFILE "textlinktar.h5" + TARGETPATH "group" + GROUP "group" { + HARDLINK "/group" + } + } + EXTERNAL_LINK "ext_link2" { + TARGETFILE "textlinktar.h5" + TARGETPATH "dset" + DATASET "dset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 3160 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + } + EXTERNAL_LINK "ext_link3" { + TARGETFILE "textlinktar.h5" + TARGETPATH "type" + DATATYPE "type" H5T_STD_I32LE; + } + EXTERNAL_LINK "ext_link4" { + TARGETFILE "textlinktar.h5" + TARGETPATH "group/elink_t2" + } + EXTERNAL_LINK "ext_link5" { + TARGETFILE "textlinktar.h5" + TARGETPATH "empty_group" + GROUP "empty_group" { + } + } + } + } + EXTERNAL_LINK "elink_t2" { + TARGETFILE "textlinksrc.h5" + TARGETPATH "/ext_link4" + } + GROUP "subgroup" { + GROUP "link_to_group" { + HARDLINK "/group" + } + } + } + } + EXTERNAL_LINK "ext_link2" { + TARGETFILE "textlinktar.h5" + TARGETPATH "dset" + DATASET "dset" { + HARDLINK "/dset" + } + } + EXTERNAL_LINK "ext_link3" { + TARGETFILE "textlinktar.h5" + TARGETPATH "type" + DATATYPE "type" HARDLINK "/type" + } + EXTERNAL_LINK "ext_link4" { + TARGETFILE "textlinktar.h5" + TARGETPATH "group/elink_t2" + } + EXTERNAL_LINK "ext_link5" { + TARGETFILE "textlinktar.h5" + TARGETPATH "empty_group" + GROUP "empty_group" { + HARDLINK "/empty_group" + } + } + } +} +} diff --git a/tools/test/h5repack/testfiles/textlinkfar-prune.textlinkfar.h5.ddl b/tools/test/h5repack/testfiles/textlinkfar-prune.textlinkfar.h5.ddl new file mode 100644 index 0000000..30f8f1b --- /dev/null +++ b/tools/test/h5repack/testfiles/textlinkfar-prune.textlinkfar.h5.ddl @@ -0,0 +1,4 @@ +HDF5 "out-textlinkfar-prune.textlinkfar.h5" { +GROUP "/" { +} +} diff --git a/tools/test/h5repack/testfiles/textlinksrc-base.textlinksrc.h5.ddl b/tools/test/h5repack/testfiles/textlinksrc-base.textlinksrc.h5.ddl new file mode 100644 index 0000000..9a9a9aa --- /dev/null +++ b/tools/test/h5repack/testfiles/textlinksrc-base.textlinksrc.h5.ddl @@ -0,0 +1,150 @@ +HDF5 "out-textlinksrc-base.textlinksrc.h5" { +GROUP "/" { + EXTERNAL_LINK "ext2soft_link1" { + TARGETFILE "tsoftlinks.h5" + TARGETPATH "/soft_dset1" + DATASET "/soft_dset1" { + DATATYPE H5T_STD_I32BE + DATASPACE SIMPLE { ( 4, 2 ) / ( 4, 2 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 32 + OFFSET 2848 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + } + EXTERNAL_LINK "ext2softdangle_link1" { + TARGETFILE "tsoftlinks.h5" + TARGETPATH "/soft_dangle" + } + EXTERNAL_LINK "ext_link1" { + TARGETFILE "textlinktar.h5" + TARGETPATH "group" + GROUP "group" { + DATASET "dset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 3136 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + EXTERNAL_LINK "elink_t1" { + TARGETFILE "textlinksrc.h5" + TARGETPATH "/" + GROUP "/" { + EXTERNAL_LINK "ext2soft_link1" { + TARGETFILE "tsoftlinks.h5" + TARGETPATH "/soft_dset1" + DATASET "/soft_dset1" { + HARDLINK "/dset1" + } + } + EXTERNAL_LINK "ext2softdangle_link1" { + TARGETFILE "tsoftlinks.h5" + TARGETPATH "/soft_dangle" + } + EXTERNAL_LINK "ext_link1" { + TARGETFILE "textlinktar.h5" + TARGETPATH "group" + GROUP "group" { + HARDLINK "/group" + } + } + EXTERNAL_LINK "ext_link2" { + TARGETFILE "textlinktar.h5" + TARGETPATH "dset" + DATASET "dset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 3160 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + } + EXTERNAL_LINK "ext_link3" { + TARGETFILE "textlinktar.h5" + TARGETPATH "type" + DATATYPE "type" H5T_STD_I32LE; + } + EXTERNAL_LINK "ext_link4" { + TARGETFILE "textlinktar.h5" + TARGETPATH "group/elink_t2" + } + EXTERNAL_LINK "ext_link5" { + TARGETFILE "textlinktar.h5" + TARGETPATH "empty_group" + GROUP "empty_group" { + } + } + } + } + EXTERNAL_LINK "elink_t2" { + TARGETFILE "textlinksrc.h5" + TARGETPATH "/ext_link4" + } + GROUP "subgroup" { + GROUP "link_to_group" { + HARDLINK "/group" + } + } + } + } + EXTERNAL_LINK "ext_link2" { + TARGETFILE "textlinktar.h5" + TARGETPATH "dset" + DATASET "dset" { + HARDLINK "/dset" + } + } + EXTERNAL_LINK "ext_link3" { + TARGETFILE "textlinktar.h5" + TARGETPATH "type" + DATATYPE "type" HARDLINK "/type" + } + EXTERNAL_LINK "ext_link4" { + TARGETFILE "textlinktar.h5" + TARGETPATH "group/elink_t2" + } + EXTERNAL_LINK "ext_link5" { + TARGETFILE "textlinktar.h5" + TARGETPATH "empty_group" + GROUP "empty_group" { + HARDLINK "/empty_group" + } + } +} +} diff --git a/tools/test/h5repack/testfiles/textlinksrc-merge.textlinksrc.h5.tst b/tools/test/h5repack/testfiles/textlinksrc-merge.textlinksrc.h5.tst new file mode 100644 index 0000000..d5a5902 --- /dev/null +++ b/tools/test/h5repack/testfiles/textlinksrc-merge.textlinksrc.h5.tst @@ -0,0 +1,32 @@ + +file1 file2 +--------------------------------------- + x x / + x x /ext2soft_link1 + x x /ext2softdangle_link1 + x x /ext_link1 + x /ext_link1/dset + x /ext_link1/elink_t1 + x /ext_link1/elink_t2 + x /ext_link1/subgroup + x /ext_link1/subgroup/link_to_group + x x /ext_link2 + x x /ext_link3 + x x /ext_link4 + x x /ext_link5 + +group : </> and </> +0 differences found +Not comparable: </ext2soft_link1> is of type H5G_UDLINK and </ext2soft_link1> is of type H5G_DATASET +external link: </ext2softdangle_link1> and </ext2softdangle_link1> +0 differences found +Not comparable: </ext_link1> is of type H5G_UDLINK and </ext_link1> is of type H5G_GROUP +Not comparable: </ext_link2> is of type H5G_UDLINK and </ext_link2> is of type H5G_DATASET +Not comparable: </ext_link3> is of type H5G_UDLINK and </ext_link3> is of type H5G_TYPE +external link: </ext_link4> and </ext_link4> +0 differences found +Not comparable: </ext_link5> is of type H5G_UDLINK and </ext_link5> is of type H5G_GROUP +-------------------------------- +Some objects are not comparable +-------------------------------- +Use -c for a list of objects without details of differences. diff --git a/tools/test/h5repack/testfiles/textlinksrc-mergeprune.textlinksrc.h5.ddl b/tools/test/h5repack/testfiles/textlinksrc-mergeprune.textlinksrc.h5.ddl new file mode 100644 index 0000000..5b3c740 --- /dev/null +++ b/tools/test/h5repack/testfiles/textlinksrc-mergeprune.textlinksrc.h5.ddl @@ -0,0 +1,187 @@ +HDF5 "out-textlinksrc-mergeprune.textlinksrc.h5" { +GROUP "/" { + DATASET "ext2soft_link1" { + DATATYPE H5T_STD_I32BE + DATASPACE SIMPLE { ( 4, 2 ) / ( 4, 2 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 32 + OFFSET 2048 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + GROUP "ext_link1" { + DATASET "dset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 2080 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + EXTERNAL_LINK "elink_t1" { + TARGETFILE "textlinksrc.h5" + TARGETPATH "/" + GROUP "/" { + EXTERNAL_LINK "ext2soft_link1" { + TARGETFILE "tsoftlinks.h5" + TARGETPATH "/soft_dset1" + DATASET "/soft_dset1" { + DATATYPE H5T_STD_I32BE + DATASPACE SIMPLE { ( 4, 2 ) / ( 4, 2 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 32 + OFFSET 2848 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + } + EXTERNAL_LINK "ext2softdangle_link1" { + TARGETFILE "tsoftlinks.h5" + TARGETPATH "/soft_dangle" + } + EXTERNAL_LINK "ext_link1" { + TARGETFILE "textlinktar.h5" + TARGETPATH "group" + GROUP "group" { + DATASET "dset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 3136 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + EXTERNAL_LINK "elink_t1" { + TARGETFILE "textlinksrc.h5" + TARGETPATH "/" + GROUP "/" { + HARDLINK "/" + } + } + EXTERNAL_LINK "elink_t2" { + TARGETFILE "textlinksrc.h5" + TARGETPATH "/ext_link4" + } + GROUP "subgroup" { + GROUP "link_to_group" { + HARDLINK "/group" + } + } + } + } + EXTERNAL_LINK "ext_link2" { + TARGETFILE "textlinktar.h5" + TARGETPATH "dset" + DATASET "dset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 3160 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + } + EXTERNAL_LINK "ext_link3" { + TARGETFILE "textlinktar.h5" + TARGETPATH "type" + DATATYPE "type" H5T_STD_I32LE; + } + EXTERNAL_LINK "ext_link4" { + TARGETFILE "textlinktar.h5" + TARGETPATH "group/elink_t2" + } + EXTERNAL_LINK "ext_link5" { + TARGETFILE "textlinktar.h5" + TARGETPATH "empty_group" + GROUP "empty_group" { + } + } + } + } + EXTERNAL_LINK "elink_t2" { + TARGETFILE "textlinksrc.h5" + TARGETPATH "/ext_link4" + } + GROUP "subgroup" { + GROUP "link_to_group" { + HARDLINK "/ext_link1" + } + } + } + DATASET "ext_link2" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 2104 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + DATATYPE "ext_link3" H5T_STD_I32LE; + GROUP "ext_link5" { + } +} +} diff --git a/tools/test/h5repack/testfiles/textlinksrc-prune.textlinksrc.h5.ddl b/tools/test/h5repack/testfiles/textlinksrc-prune.textlinksrc.h5.ddl new file mode 100644 index 0000000..65d35ef --- /dev/null +++ b/tools/test/h5repack/testfiles/textlinksrc-prune.textlinksrc.h5.ddl @@ -0,0 +1,4 @@ +HDF5 "out-textlinksrc-prune.textlinksrc.h5" { +GROUP "/" { +} +} diff --git a/tools/test/h5repack/testfiles/textlinktar-base.textlinktar.h5.ddl b/tools/test/h5repack/testfiles/textlinktar-base.textlinktar.h5.ddl new file mode 100644 index 0000000..3f02ff2 --- /dev/null +++ b/tools/test/h5repack/testfiles/textlinktar-base.textlinktar.h5.ddl @@ -0,0 +1,168 @@ +HDF5 "out-textlinktar-base.textlinktar.h5" { +GROUP "/" { + DATASET "dset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 2048 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + GROUP "empty_group" { + } + GROUP "group" { + DATASET "dset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 2072 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + EXTERNAL_LINK "elink_t1" { + TARGETFILE "textlinksrc.h5" + TARGETPATH "/" + GROUP "/" { + EXTERNAL_LINK "ext2soft_link1" { + TARGETFILE "tsoftlinks.h5" + TARGETPATH "/soft_dset1" + DATASET "/soft_dset1" { + DATATYPE H5T_STD_I32BE + DATASPACE SIMPLE { ( 4, 2 ) / ( 4, 2 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 32 + OFFSET 2848 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + } + EXTERNAL_LINK "ext2softdangle_link1" { + TARGETFILE "tsoftlinks.h5" + TARGETPATH "/soft_dangle" + } + EXTERNAL_LINK "ext_link1" { + TARGETFILE "textlinktar.h5" + TARGETPATH "group" + GROUP "group" { + DATASET "dset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 3136 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + EXTERNAL_LINK "elink_t1" { + TARGETFILE "textlinksrc.h5" + TARGETPATH "/" + GROUP "/" { + HARDLINK "/" + } + } + EXTERNAL_LINK "elink_t2" { + TARGETFILE "textlinksrc.h5" + TARGETPATH "/ext_link4" + } + GROUP "subgroup" { + GROUP "link_to_group" { + HARDLINK "/group" + } + } + } + } + EXTERNAL_LINK "ext_link2" { + TARGETFILE "textlinktar.h5" + TARGETPATH "dset" + DATASET "dset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 3160 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + } + EXTERNAL_LINK "ext_link3" { + TARGETFILE "textlinktar.h5" + TARGETPATH "type" + DATATYPE "type" H5T_STD_I32LE; + } + EXTERNAL_LINK "ext_link4" { + TARGETFILE "textlinktar.h5" + TARGETPATH "group/elink_t2" + } + EXTERNAL_LINK "ext_link5" { + TARGETFILE "textlinktar.h5" + TARGETPATH "empty_group" + GROUP "empty_group" { + } + } + } + } + EXTERNAL_LINK "elink_t2" { + TARGETFILE "textlinksrc.h5" + TARGETPATH "/ext_link4" + } + GROUP "subgroup" { + GROUP "link_to_group" { + HARDLINK "/group" + } + } + } + DATATYPE "type" H5T_STD_I32LE; +} +} diff --git a/tools/test/h5repack/testfiles/textlinktar-merge.textlinktar.h5.tst b/tools/test/h5repack/testfiles/textlinktar-merge.textlinktar.h5.tst new file mode 100644 index 0000000..ccf4f7b --- /dev/null +++ b/tools/test/h5repack/testfiles/textlinktar-merge.textlinktar.h5.tst @@ -0,0 +1,44 @@ + +file1 file2 +--------------------------------------- + x x / + x x /dset + x x /empty_group + x x /group + x x /group/dset + x x /group/elink_t1 + x /group/elink_t1/ext2soft_link1 + x /group/elink_t1/ext2softdangle_link1 + x /group/elink_t1/ext_link1 + x /group/elink_t1/ext_link2 + x /group/elink_t1/ext_link3 + x /group/elink_t1/ext_link4 + x /group/elink_t1/ext_link5 + x x /group/elink_t2 + x x /group/subgroup + x x /group/subgroup/link_to_group + x x /type + +group : </> and </> +0 differences found +dataset: </dset> and </dset> +0 differences found +group : </empty_group> and </empty_group> +0 differences found +group : </group> and </group> +0 differences found +dataset: </group/dset> and </group/dset> +0 differences found +Not comparable: </group/elink_t1> is of type H5G_UDLINK and </group/elink_t1> is of type H5G_GROUP +external link: </group/elink_t2> and </group/elink_t2> +0 differences found +group : </group/subgroup> and </group/subgroup> +0 differences found +group : </group/subgroup/link_to_group> and </group/subgroup/link_to_group> +0 differences found +datatype: </type> and </type> +0 differences found +-------------------------------- +Some objects are not comparable +-------------------------------- +Use -c for a list of objects without details of differences. diff --git a/tools/test/h5repack/testfiles/textlinktar-mergeprune.textlinktar.h5.ddl b/tools/test/h5repack/testfiles/textlinktar-mergeprune.textlinktar.h5.ddl new file mode 100644 index 0000000..c52e34d --- /dev/null +++ b/tools/test/h5repack/testfiles/textlinktar-mergeprune.textlinktar.h5.ddl @@ -0,0 +1,200 @@ +HDF5 "out-textlinktar-mergeprune.textlinktar.h5" { +GROUP "/" { + DATASET "dset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 2048 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + GROUP "empty_group" { + } + GROUP "group" { + DATASET "dset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 2072 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + GROUP "elink_t1" { + EXTERNAL_LINK "ext2soft_link1" { + TARGETFILE "tsoftlinks.h5" + TARGETPATH "/soft_dset1" + DATASET "/soft_dset1" { + DATATYPE H5T_STD_I32BE + DATASPACE SIMPLE { ( 4, 2 ) / ( 4, 2 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 32 + OFFSET 2848 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + } + EXTERNAL_LINK "ext2softdangle_link1" { + TARGETFILE "tsoftlinks.h5" + TARGETPATH "/soft_dangle" + } + EXTERNAL_LINK "ext_link1" { + TARGETFILE "textlinktar.h5" + TARGETPATH "group" + GROUP "group" { + DATASET "dset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 3136 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + EXTERNAL_LINK "elink_t1" { + TARGETFILE "textlinksrc.h5" + TARGETPATH "/" + GROUP "/" { + EXTERNAL_LINK "ext2soft_link1" { + TARGETFILE "tsoftlinks.h5" + TARGETPATH "/soft_dset1" + DATASET "/soft_dset1" { + HARDLINK "/dset1" + } + } + EXTERNAL_LINK "ext2softdangle_link1" { + TARGETFILE "tsoftlinks.h5" + TARGETPATH "/soft_dangle" + } + EXTERNAL_LINK "ext_link1" { + TARGETFILE "textlinktar.h5" + TARGETPATH "group" + GROUP "group" { + HARDLINK "/group" + } + } + EXTERNAL_LINK "ext_link2" { + TARGETFILE "textlinktar.h5" + TARGETPATH "dset" + DATASET "dset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 3160 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + } + EXTERNAL_LINK "ext_link3" { + TARGETFILE "textlinktar.h5" + TARGETPATH "type" + DATATYPE "type" H5T_STD_I32LE; + } + EXTERNAL_LINK "ext_link4" { + TARGETFILE "textlinktar.h5" + TARGETPATH "group/elink_t2" + } + EXTERNAL_LINK "ext_link5" { + TARGETFILE "textlinktar.h5" + TARGETPATH "empty_group" + GROUP "empty_group" { + } + } + } + } + EXTERNAL_LINK "elink_t2" { + TARGETFILE "textlinksrc.h5" + TARGETPATH "/ext_link4" + } + GROUP "subgroup" { + GROUP "link_to_group" { + HARDLINK "/group" + } + } + } + } + EXTERNAL_LINK "ext_link2" { + TARGETFILE "textlinktar.h5" + TARGETPATH "dset" + DATASET "dset" { + HARDLINK "/dset" + } + } + EXTERNAL_LINK "ext_link3" { + TARGETFILE "textlinktar.h5" + TARGETPATH "type" + DATATYPE "type" HARDLINK "/type" + } + EXTERNAL_LINK "ext_link4" { + TARGETFILE "textlinktar.h5" + TARGETPATH "group/elink_t2" + } + EXTERNAL_LINK "ext_link5" { + TARGETFILE "textlinktar.h5" + TARGETPATH "empty_group" + GROUP "empty_group" { + HARDLINK "/empty_group" + } + } + } + GROUP "subgroup" { + GROUP "link_to_group" { + HARDLINK "/group" + } + } + } + DATATYPE "type" H5T_STD_I32LE; +} +} diff --git a/tools/test/h5repack/testfiles/textlinktar-prune.textlinktar.h5.ddl b/tools/test/h5repack/testfiles/textlinktar-prune.textlinktar.h5.ddl new file mode 100644 index 0000000..6787784 --- /dev/null +++ b/tools/test/h5repack/testfiles/textlinktar-prune.textlinktar.h5.ddl @@ -0,0 +1,52 @@ +HDF5 "out-textlinktar-prune.textlinktar.h5" { +GROUP "/" { + DATASET "dset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 2048 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + GROUP "empty_group" { + } + GROUP "group" { + DATASET "dset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 6 ) / ( 6 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 24 + OFFSET 2072 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + GROUP "subgroup" { + GROUP "link_to_group" { + HARDLINK "/group" + } + } + } + DATATYPE "type" H5T_STD_I32LE; +} +} diff --git a/tools/test/h5repack/testfiles/tsoftlinks-base.tsoftlinks.h5.ddl b/tools/test/h5repack/testfiles/tsoftlinks-base.tsoftlinks.h5.ddl new file mode 100644 index 0000000..b0cd32d --- /dev/null +++ b/tools/test/h5repack/testfiles/tsoftlinks-base.tsoftlinks.h5.ddl @@ -0,0 +1,77 @@ +HDF5 "out-tsoftlinks-base.tsoftlinks.h5" { +GROUP "/" { + DATASET "dset1" { + DATATYPE H5T_STD_I32BE + DATASPACE SIMPLE { ( 4, 2 ) / ( 4, 2 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 32 + OFFSET 2048 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + DATASET "dset2" { + DATATYPE H5T_STD_I32BE + DATASPACE SIMPLE { ( 4, 2 ) / ( 4, 2 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 32 + OFFSET 2080 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + DATATYPE "dtype" H5T_STD_I32BE; + GROUP "group1" { + SOFTLINK "soft_dangle" { + LINKTARGET "not_yet" + } + SOFTLINK "soft_dset1" { + LINKTARGET "/dset1" + } + SOFTLINK "soft_dset2" { + LINKTARGET "/dset2" + } + SOFTLINK "soft_dtype" { + LINKTARGET "/dtype" + } + SOFTLINK "soft_empty_grp" { + LINKTARGET "/group_empty" + } + } + GROUP "group_empty" { + } + SOFTLINK "soft_dangle" { + LINKTARGET "not_yet" + } + SOFTLINK "soft_dset1" { + LINKTARGET "/dset1" + } + SOFTLINK "soft_dtype" { + LINKTARGET "/dtype" + } + SOFTLINK "soft_empty_grp" { + LINKTARGET "/group_empty" + } + SOFTLINK "soft_group1" { + LINKTARGET "/group1" + } +} +} diff --git a/tools/test/h5repack/testfiles/tsoftlinks-merge.tsoftlinks.h5.tst b/tools/test/h5repack/testfiles/tsoftlinks-merge.tsoftlinks.h5.tst new file mode 100644 index 0000000..27c33d7 --- /dev/null +++ b/tools/test/h5repack/testfiles/tsoftlinks-merge.tsoftlinks.h5.tst @@ -0,0 +1,53 @@ + +file1 file2 +--------------------------------------- + x x / + x x /dset1 + x x /dset2 + x x /dtype + x x /group1 + x x /group1/soft_dangle + x x /group1/soft_dset1 + x x /group1/soft_dset2 + x x /group1/soft_dtype + x x /group1/soft_empty_grp + x x /group_empty + x x /soft_dangle + x x /soft_dset1 + x x /soft_dtype + x x /soft_empty_grp + x x /soft_group1 + x /soft_group1/soft_dangle + x /soft_group1/soft_dset1 + x /soft_group1/soft_dset2 + x /soft_group1/soft_dtype + x /soft_group1/soft_empty_grp + +group : </> and </> +0 differences found +dataset: </dset1> and </dset1> +0 differences found +dataset: </dset2> and </dset2> +0 differences found +datatype: </dtype> and </dtype> +0 differences found +group : </group1> and </group1> +0 differences found +link : </group1/soft_dangle> and </group1/soft_dangle> +0 differences found +Not comparable: </group1/soft_dset1> is of type H5G_LINK and </group1/soft_dset1> is of type H5G_DATASET +Not comparable: </group1/soft_dset2> is of type H5G_LINK and </group1/soft_dset2> is of type H5G_DATASET +Not comparable: </group1/soft_dtype> is of type H5G_LINK and </group1/soft_dtype> is of type H5G_TYPE +Not comparable: </group1/soft_empty_grp> is of type H5G_LINK and </group1/soft_empty_grp> is of type H5G_GROUP +group : </group_empty> and </group_empty> +0 differences found +link : </soft_dangle> and </soft_dangle> +0 differences found +Not comparable: </soft_dset1> is of type H5G_LINK and </soft_dset1> is of type H5G_DATASET +Not comparable: </soft_dtype> is of type H5G_LINK and </soft_dtype> is of type H5G_TYPE +Not comparable: </soft_empty_grp> is of type H5G_LINK and </soft_empty_grp> is of type H5G_GROUP +Not comparable: </soft_group1> is of type H5G_LINK and </soft_group1> is of type H5G_GROUP +-------------------------------- +Some objects are not comparable +-------------------------------- +Use -c for a list of objects without details of differences. diff --git a/tools/test/h5repack/testfiles/tsoftlinks-mergeprune.tsoftlinks.h5.ddl b/tools/test/h5repack/testfiles/tsoftlinks-mergeprune.tsoftlinks.h5.ddl new file mode 100644 index 0000000..fa4e12d --- /dev/null +++ b/tools/test/h5repack/testfiles/tsoftlinks-mergeprune.tsoftlinks.h5.ddl @@ -0,0 +1,127 @@ +HDF5 "out-tsoftlinks-mergeprune.tsoftlinks.h5" { +GROUP "/" { + DATASET "dset1" { + DATATYPE H5T_STD_I32BE + DATASPACE SIMPLE { ( 4, 2 ) / ( 4, 2 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 32 + OFFSET 2048 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + DATASET "dset2" { + DATATYPE H5T_STD_I32BE + DATASPACE SIMPLE { ( 4, 2 ) / ( 4, 2 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 32 + OFFSET 2080 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + DATATYPE "dtype" H5T_STD_I32BE; + GROUP "group1" { + DATASET "soft_dset1" { + DATATYPE H5T_STD_I32BE + DATASPACE SIMPLE { ( 4, 2 ) / ( 4, 2 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 32 + OFFSET 2112 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + DATASET "soft_dset2" { + DATATYPE H5T_STD_I32BE + DATASPACE SIMPLE { ( 4, 2 ) / ( 4, 2 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 32 + OFFSET 2144 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + DATATYPE "soft_dtype" H5T_STD_I32BE; + GROUP "soft_empty_grp" { + } + } + GROUP "group_empty" { + } + DATASET "soft_dset1" { + DATATYPE H5T_STD_I32BE + DATASPACE SIMPLE { ( 4, 2 ) / ( 4, 2 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 32 + OFFSET 2176 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + DATATYPE "soft_dtype" H5T_STD_I32BE; + GROUP "soft_empty_grp" { + } + GROUP "soft_group1" { + SOFTLINK "soft_dangle" { + LINKTARGET "not_yet" + } + SOFTLINK "soft_dset1" { + LINKTARGET "/dset1" + } + SOFTLINK "soft_dset2" { + LINKTARGET "/dset2" + } + SOFTLINK "soft_dtype" { + LINKTARGET "/dtype" + } + SOFTLINK "soft_empty_grp" { + LINKTARGET "/group_empty" + } + } +} +} diff --git a/tools/test/h5repack/testfiles/tsoftlinks-prune.tsoftlinks.h5.ddl b/tools/test/h5repack/testfiles/tsoftlinks-prune.tsoftlinks.h5.ddl new file mode 100644 index 0000000..de58ef2 --- /dev/null +++ b/tools/test/h5repack/testfiles/tsoftlinks-prune.tsoftlinks.h5.ddl @@ -0,0 +1,47 @@ +HDF5 "out-tsoftlinks-prune.tsoftlinks.h5" { +GROUP "/" { + DATASET "dset1" { + DATATYPE H5T_STD_I32BE + DATASPACE SIMPLE { ( 4, 2 ) / ( 4, 2 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 32 + OFFSET 2048 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + DATASET "dset2" { + DATATYPE H5T_STD_I32BE + DATASPACE SIMPLE { ( 4, 2 ) / ( 4, 2 ) } + STORAGE_LAYOUT { + CONTIGUOUS + SIZE 32 + OFFSET 2080 + } + FILTERS { + NONE + } + FILLVALUE { + FILL_TIME H5D_FILL_TIME_IFSET + VALUE H5D_FILL_VALUE_DEFAULT + } + ALLOCATION_TIME { + H5D_ALLOC_TIME_LATE + } + } + DATATYPE "dtype" H5T_STD_I32BE; + GROUP "group1" { + } + GROUP "group_empty" { + } +} +} diff --git a/tools/test/misc/h5perf_gentest.c b/tools/test/misc/h5perf_gentest.c index f50e5fb..511a9e2 100644 --- a/tools/test/misc/h5perf_gentest.c +++ b/tools/test/misc/h5perf_gentest.c @@ -14,7 +14,7 @@ creates a large number of attributes, groups, and datasets by specifying -a, -g, -d options respectively. Using "-h" option to see details. - Programmer: Peter Cao <xcao@hdfgroup.org>, Jan. 2013 + Programmer: Peter Cao, Jan. 2013 ****************************************************************************/ #include "hdf5.h" @@ -128,7 +128,7 @@ int main (int argc, char *argv[]) Return: Non-negative on success/Negative on failure - Programmer: Peter Cao <xcao@hdfgroup.org>, Jan. 2013 + Programmer: Peter Cao, Jan. 2013 ****************************************************************************/ herr_t create_perf_test_file(const char *fname, int ngrps, int ndsets, int nattrs, hsize_t nrows, hsize_t dim0, hsize_t chunk, int vlen, diff --git a/tools/test/misc/h5repart_gentest.c b/tools/test/misc/h5repart_gentest.c index bd94104..520069f 100644 --- a/tools/test/misc/h5repart_gentest.c +++ b/tools/test/misc/h5repart_gentest.c @@ -12,7 +12,7 @@ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* - * Programmer: Raymond Lu<slu@ncsa.uiuc.edu> + * Programmer: Raymond Lu * June 1, 2005 * * Purpose: Generate a family file of 1024 bytes for each member diff --git a/tools/test/misc/testfiles/h5mkgrp_version.txt.in b/tools/test/misc/testfiles/h5mkgrp_version.txt.in index 75c13a5..37dbabd 100644 --- a/tools/test/misc/testfiles/h5mkgrp_version.txt.in +++ b/tools/test/misc/testfiles/h5mkgrp_version.txt.in @@ -1 +1 @@ -h5mkgrp: Version @HDF5_PACKAGE_VERSION_STRING@ +h5mkgrp: Version @HDF5_RELEASE_VERSION_STRING@ diff --git a/tools/test/misc/testh5mkgrp.sh.in b/tools/test/misc/testh5mkgrp.sh.in index 3ad1f71..7dc8155 100644 --- a/tools/test/misc/testh5mkgrp.sh.in +++ b/tools/test/misc/testh5mkgrp.sh.in @@ -13,7 +13,7 @@ # # Tests for the h5mkgrp tool # -# Quincey Koziol (koziol@hdfgroup.org) +# Quincey Koziol # Tuesday, February 13, 2007 # @@ -150,10 +150,11 @@ TOOLTEST() { TESTING $H5MKGRP $@ ( - cd $TESTDIR - $RUNSERIAL $H5MKGRP_BIN $@ + cd $TESTDIR + $RUNSERIAL $H5MKGRP_BIN $@ ) > output.out RET=$? + if [ $RET != 0 ]; then echo "*FAILED*" echo "failed result is:" @@ -164,7 +165,7 @@ TOOLTEST() # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f output.out + rm -f output.out fi fi } @@ -181,8 +182,8 @@ H5LSTEST() # any unexpected output from that stream too. VERIFY_H5LS $@ ( - cd $TESTDIR - $RUNSERIAL $H5LS_BIN $H5LS_ARGS $@ + cd $TESTDIR + $RUNSERIAL $H5LS_BIN $H5LS_ARGS $@ ) 2>&1 |sed 's/Modified:.*/Modified: XXXX-XX-XX XX:XX:XX XXX/' >$actual # save actual in case it is needed later. @@ -190,25 +191,25 @@ H5LSTEST() STDOUT_FILTER $actual STDERR_FILTER $actual - if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ls) missing" - nerrors="`expr $nerrors + 1`" - elif $CMP $expect $actual; then - echo " PASSED" - else - echo "*FAILED*" - echo " Expected result (*.ls) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' - fi - - # Clean up output file - if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_sav - fi + if [ ! -f $expect ]; then + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ls) missing" + nerrors="`expr $nerrors + 1`" + elif $CMP $expect $actual; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected result (*.ls) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + fi + + # Clean up output file + if test -z "$HDF5_NOCLEANUP"; then + rm -f $actual $actual_sav + fi } # Single run of tool @@ -258,30 +259,30 @@ CMPTEST() # any unexpected output from that stream too. TESTING $H5MKGRP $@ ( - cd $TESTDIR - $RUNSERIAL $H5MKGRP_BIN $@ + cd $TESTDIR + $RUNSERIAL $H5MKGRP_BIN $@ ) >$actual 2>$actual_err cat $actual_err >> $actual - if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.txt) missing" - nerrors="`expr $nerrors + 1`" - elif $CMP $expect $actual; then - echo " PASSED" - else - echo "*FAILED*" - echo " Expected result (*.txt) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' - fi - - # Clean up output file - if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err - fi + if [ ! -f $expect ]; then + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.txt) missing" + nerrors="`expr $nerrors + 1`" + elif $CMP $expect $actual; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected result (*.txt) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + fi + + # Clean up output file + if test -z "$HDF5_NOCLEANUP"; then + rm -f $actual $actual_err + fi } ############################################################################## diff --git a/tools/test/perform/chunk.c b/tools/test/perform/chunk.c index 3603c9b..bd16e1d 100644 --- a/tools/test/perform/chunk.c +++ b/tools/test/perform/chunk.c @@ -12,7 +12,7 @@ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* - * Programmer: Robb Matzke <robb@arborea.spizella.com> + * Programmer: Robb Matzke * Thursday, May 14, 1998 * * Purpose: Checks the effect of various I/O request sizes and raw data diff --git a/tools/test/perform/iopipe.c b/tools/test/perform/iopipe.c index de56281..bb74a1b 100644 --- a/tools/test/perform/iopipe.c +++ b/tools/test/perform/iopipe.c @@ -12,7 +12,7 @@ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* - * Programmer: Robb Matzke <matzke@llnl.gov> + * Programmer: Robb Matzke * Thursday, March 12, 1998 */ diff --git a/tools/test/perform/overhead.c b/tools/test/perform/overhead.c index 58558a5..bb3aff5 100644 --- a/tools/test/perform/overhead.c +++ b/tools/test/perform/overhead.c @@ -12,7 +12,7 @@ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* - * Programmer: Robb Matzke <matzke@llnl.gov> + * Programmer: Robb Matzke * Monday, September 28, 1998 * * Purpose: Creates a chunked dataset and measures the storage overhead. diff --git a/tools/test/perform/perf_meta.c b/tools/test/perform/perf_meta.c index b56f074..77248cc 100644 --- a/tools/test/perform/perf_meta.c +++ b/tools/test/perform/perf_meta.c @@ -12,7 +12,7 @@ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* - * Programmer: Raymond Lu <slu@ncsa.uiuc.edu> + * Programmer: Raymond Lu * Friday, Oct 3, 2004 * * Purpose: Tests performance of metadata |