diff options
-rw-r--r-- | c++/examples/Makefile.am | 4 | ||||
-rw-r--r-- | c++/examples/Makefile.in | 24 | ||||
-rw-r--r-- | config/examples.am | 23 | ||||
-rw-r--r-- | config/intel-flags | 11 | ||||
-rw-r--r-- | config/linux-gnulibc1 | 21 | ||||
-rw-r--r-- | config/solaris2.x | 6 | ||||
-rwxr-xr-x | configure | 7 | ||||
-rw-r--r-- | configure.ac | 5 | ||||
-rw-r--r-- | examples/Makefile.am | 10 | ||||
-rw-r--r-- | examples/Makefile.in | 30 | ||||
-rw-r--r-- | fortran/examples/Makefile.am | 4 | ||||
-rw-r--r-- | fortran/examples/Makefile.in | 24 | ||||
-rw-r--r-- | fortran/examples/run-fortran-ex.sh.in | 32 | ||||
-rw-r--r-- | hl/c++/examples/Makefile.am | 1 | ||||
-rw-r--r-- | hl/c++/examples/Makefile.in | 22 | ||||
-rw-r--r-- | hl/examples/Makefile.am | 5 | ||||
-rw-r--r-- | hl/examples/Makefile.in | 26 | ||||
-rw-r--r-- | hl/fortran/examples/Makefile.am | 1 | ||||
-rw-r--r-- | hl/fortran/examples/Makefile.in | 22 | ||||
-rw-r--r-- | perform/pio_engine.c | 2 | ||||
-rw-r--r-- | perform/sio_engine.c | 2 |
21 files changed, 185 insertions, 97 deletions
diff --git a/c++/examples/Makefile.am b/c++/examples/Makefile.am index df68447..92c757f 100644 --- a/c++/examples/Makefile.am +++ b/c++/examples/Makefile.am @@ -21,6 +21,8 @@ include $(top_srcdir)/config/commence.am +INSTALL_SCRIPT_FILES = run-c++-ex.sh + # These are the programs that 'make all' or 'make prog' will build and # which 'make check' will run. List them in the order they should be run. EXAMPLE_PROG=create readdata writedata compound extend_ds chunks h5group \ @@ -28,6 +30,7 @@ EXAMPLE_PROG=create readdata writedata compound extend_ds chunks h5group \ h5tutr_crtgrp h5tutr_crtgrpd h5tutr_extend h5tutr_rdwt \ h5tutr_subset TEST_SCRIPT=testh5c++.sh +TEST_EXAMPLES_SCRIPT=$(INSTALL_SCRIPT_FILES) # These are the example files to be installed INSTALL_FILES=create.cpp readdata.cpp writedata.cpp compound.cpp \ @@ -35,7 +38,6 @@ INSTALL_FILES=create.cpp readdata.cpp writedata.cpp compound.cpp \ h5tutr_cmprss.cpp h5tutr_crtatt.cpp h5tutr_crtdat.cpp \ h5tutr_crtgrpar.cpp h5tutr_crtgrp.cpp h5tutr_crtgrpd.cpp \ h5tutr_extend.cpp h5tutr_rdwt.cpp h5tutr_subset.cpp -INSTALL_SCRIPT_FILES = run-c++-ex.sh # Some of the examples depend on files created by running other examples readdata.chkexe_: create.chkexe_ diff --git a/c++/examples/Makefile.in b/c++/examples/Makefile.in index b8c41b2..14001d5 100644 --- a/c++/examples/Makefile.in +++ b/c++/examples/Makefile.in @@ -613,6 +613,7 @@ TRACE = perl $(top_srcdir)/bin/trace # .chklog files are output from those tests. # *.clog are from the MPE option. CHECK_CLEANFILES = *.chkexe *.chklog *.clog *.h5 +INSTALL_SCRIPT_FILES = run-c++-ex.sh # These are the programs that 'make all' or 'make prog' will build and # which 'make check' will run. List them in the order they should be run. @@ -622,6 +623,7 @@ EXAMPLE_PROG = create readdata writedata compound extend_ds chunks h5group \ h5tutr_subset TEST_SCRIPT = testh5c++.sh +TEST_EXAMPLES_SCRIPT = $(INSTALL_SCRIPT_FILES) # These are the example files to be installed INSTALL_FILES = create.cpp readdata.cpp writedata.cpp compound.cpp \ @@ -630,7 +632,6 @@ INSTALL_FILES = create.cpp readdata.cpp writedata.cpp compound.cpp \ h5tutr_crtgrpar.cpp h5tutr_crtgrp.cpp h5tutr_crtgrpd.cpp \ h5tutr_extend.cpp h5tutr_rdwt.cpp h5tutr_subset.cpp -INSTALL_SCRIPT_FILES = run-c++-ex.sh # Tell conclude.am that these are C++ tests. CXX_API = yes @@ -1101,27 +1102,34 @@ install-examples: $(EXAMPLEDIR) $(INSTALL_FILES) uninstall-examples: @if test -n "$(INSTALL_FILES)" -a -d $(EXAMPLEDIR); then \ set -x; cd $(EXAMPLEDIR) && $(RM) $(INSTALL_FILES); \ - fi + fi @if test -n "$(INSTALL_SCRIPT_FILES)" -a -d $(EXAMPLEDIR); then \ set -x; cd $(EXAMPLEDIR) && $(RM) $(INSTALL_SCRIPT_FILES); \ - fi + fi @if test -n "$(INSTALL_TOP_FILES)" -a -d $(EXAMPLETOPDIR); then \ set -x; cd $(EXAMPLETOPDIR) && $(RM) $(INSTALL_TOP_FILES); \ - fi + fi @if test -n "$(INSTALL_TOP_SCRIPT_FILES)" -a -d $(EXAMPLETOPDIR); then \ set -x; cd $(EXAMPLETOPDIR) && $(RM) $(INSTALL_TOP_SCRIPT_FILES); \ - fi + fi installcheck-local: @if test "$(STATIC_SHARED)" = "static, shared"; then \ H5CCFLAGS="-shlib" $(MAKE) $(AM_MAKEFLAGS) check; \ $(MAKE) $(AM_MAKEFLAGS) clean; \ H5CCFLAGS="" $(MAKE) $(AM_MAKEFLAGS) check; \ - elif test "$(STATIC_SHARED)" = "shared"; then \ + elif test "$(STATIC_SHARED)" = "shared"; then \ H5CCFLAGS="-shlib" $(MAKE) $(AM_MAKEFLAGS) check; \ - else \ + else \ $(MAKE) $(AM_MAKEFLAGS) check; \ - fi + fi + @if test "$(INSTALL_FILES)" -a $(TEST_EXAMPLES_SCRIPT) -a -d $(EXAMPLEDIR); then \ + echo "============================"; \ + echo "Testing $(TEST_EXAMPLES_SCRIPT)"; \ + echo "============================"; \ + (cd $(EXAMPLEDIR); \ + /bin/sh ./$(TEST_EXAMPLES_SCRIPT);) \ + fi # lib/progs/tests targets recurse into subdirectories. build-* targets # build files in this directory. diff --git a/config/examples.am b/config/examples.am index bf0708c..8597a16 100644 --- a/config/examples.am +++ b/config/examples.am @@ -91,27 +91,32 @@ install-examples: $(EXAMPLEDIR) $(INSTALL_FILES) uninstall-examples: @if test -n "$(INSTALL_FILES)" -a -d $(EXAMPLEDIR); then \ set -x; cd $(EXAMPLEDIR) && $(RM) $(INSTALL_FILES); \ - fi + fi @if test -n "$(INSTALL_SCRIPT_FILES)" -a -d $(EXAMPLEDIR); then \ set -x; cd $(EXAMPLEDIR) && $(RM) $(INSTALL_SCRIPT_FILES); \ - fi + fi @if test -n "$(INSTALL_TOP_FILES)" -a -d $(EXAMPLETOPDIR); then \ set -x; cd $(EXAMPLETOPDIR) && $(RM) $(INSTALL_TOP_FILES); \ - fi + fi @if test -n "$(INSTALL_TOP_SCRIPT_FILES)" -a -d $(EXAMPLETOPDIR); then \ set -x; cd $(EXAMPLETOPDIR) && $(RM) $(INSTALL_TOP_SCRIPT_FILES); \ - fi + fi installcheck-local: @if test "$(STATIC_SHARED)" = "static, shared"; then \ H5CCFLAGS="-shlib" $(MAKE) $(AM_MAKEFLAGS) check; \ $(MAKE) $(AM_MAKEFLAGS) clean; \ H5CCFLAGS="" $(MAKE) $(AM_MAKEFLAGS) check; \ - elif test "$(STATIC_SHARED)" = "shared"; then \ + elif test "$(STATIC_SHARED)" = "shared"; then \ H5CCFLAGS="-shlib" $(MAKE) $(AM_MAKEFLAGS) check; \ - else \ + else \ $(MAKE) $(AM_MAKEFLAGS) check; \ - fi - - + fi + @if test "$(INSTALL_FILES)" -a $(TEST_EXAMPLES_SCRIPT) -a -d $(EXAMPLEDIR); then \ + echo "============================"; \ + echo "Testing $(TEST_EXAMPLES_SCRIPT)"; \ + echo "============================"; \ + (cd $(EXAMPLEDIR); \ + /bin/sh ./$(TEST_EXAMPLES_SCRIPT);) \ + fi diff --git a/config/intel-flags b/config/intel-flags index 1d01d7f..3187daf 100644 --- a/config/intel-flags +++ b/config/intel-flags @@ -92,12 +92,8 @@ fi # # Please follow the pattern below by adding new versions at the top, copying # the information from the previous version and adding modifications to that. +# The default at the bottom will apply if no earlier version matches. case "$cc_vendor-$cc_version" in - icc-11* | icc-12*) - # -s became obsolete; we also fixed bugs that allow us to enable higher level - # of optimization starting with 1.8.7 - PROD_CFLAGS="-O3" - ;; icc-10*) PROD_CFLAGS="-O1 -Wl,-s" ;; @@ -105,6 +101,11 @@ case "$cc_vendor-$cc_version" in # v8.0 -O3 infinite loops when compiling test/tselect.c. Use -O2. PROD_CFLAGS="-O2 -Wl,-s" ;; + icc-*) + # -s became obsolete; we also fixed bugs that allow us to enable higher level + # of optimization starting with 1.8.7 + PROD_CFLAGS="-O3" + ;; esac # Clear cc info if no flags set diff --git a/config/linux-gnulibc1 b/config/linux-gnulibc1 index 9dcc411..c18c02d 100644 --- a/config/linux-gnulibc1 +++ b/config/linux-gnulibc1 @@ -41,7 +41,6 @@ fi # Figure out Intel C compiler flags . $srcdir/config/intel-flags -echo "CC_BASENAME is $CC_BASENAME." # Use default Fortran 90 compiler according to what C compiler is used. if test "X-" = "X-$FC"; then case $CC_BASENAME in @@ -136,6 +135,13 @@ case $CC in cc_version_info=`$CC $CFLAGS $H5_CFLAGS --version 2>&1 | grep -v 'PathScale' |\ grep 'GCC' | sed 's/\(.*(GCC) [-a-z0-9\. ]*\).*/\1/'` ;; + # this must come before *icc* for the same reason + *mpicc*) + cc_version_info=`$CC $CCFLAGS $H5_CCFLAGS -v 2>&1 | grep 'version' |\ + sed 's/^[a-z0-9]* for //' |\ + sed 's/^\([a-z]* \)/ built with \1/1'` + cc_version_info=`echo $cc_version_info` + ;; *icc*) cc_version_info=`$CC $CCFLAGS $H5_CCFLAGS -V 2>&1 | grep 'Version' |\ @@ -154,6 +160,13 @@ case $FC in grep 'GCC' | sed 's/\(.*(GCC) [-a-z0-9\. ]*\).*/\1/'` ;; + *mpif90*) + fc_version_info=`$FC $FCFLAGS $H5_FCFLAGS -v 2>&1 | grep 'version' |\ + sed 's/^[a-z0-9]* for //' |\ + sed 's/^\([a-z]* \)/ built with \1/1'` + fc_version_info=`echo $fc_version_info` + ;; + *ifc*|*ifort*) fc_version_info=`$FC $FCFLAGS $H5_FCFLAGS -V 2>&1 | grep 'Version' |\ sed 's/\(Intel.* Compiler\).*\( Version [a-z0-9\.]*\).*\( Build [0-9]*\)/\1\2\3/'` @@ -202,6 +215,12 @@ case $CXX in cxx_version_info=`$CXX $CXXFLAGS $H5_CXXFLAGS -V 2>&1 | grep 'pgCC'` ;; + *mpicxx*) + cxx_version_info=`$CXX $CXXFLAGS $H5_CXXFLAGS -v 2>&1 | grep 'version' |\ + sed 's/^[a-z0-9]* for //' |\ + sed 's/^\([a-z]* \)/ built with \1/1'` + cxx_version_info=`echo $cxx_version_info` + ;; *) echo "No match to get cxx_version_info for $CXX" diff --git a/config/solaris2.x b/config/solaris2.x index edf8d59..310c373 100644 --- a/config/solaris2.x +++ b/config/solaris2.x @@ -122,7 +122,7 @@ fi case $CC in *cc*) cc_version_info=`$CC $CFLAGS $H5_CFLAGS -V 2>&1 | grep 'Sun' |\ - sed 's/.*\(Sun.*\)/\1 /'` + sed 's/.*\(Sun .*\)/\1 /'` ;; *) @@ -135,7 +135,7 @@ case $FC in # The PGI and Intel compilers are automatically detected below *f90*) fc_version_info=`$FC $FCFLAGS $H5_FCFLAGS -V 2>&1 | grep 'Sun' |\ - sed 's/.*\(Sun.*\)/\1 /'` + sed 's/.*\(Sun .*\)/\1 /'` ;; *) @@ -148,7 +148,7 @@ echo "Fortran compiler '$FC' is $fc_version_info" case $CXX in *CC*) cxx_version_info=`$CXX $CXXFLAGS $H5_CXXFLAGS -V 2>&1 | grep 'Sun' |\ - sed 's/.*\(Sun.*\)/\1 /'` + sed 's/.*\(Sun .*\)/\1 /'` ;; *) @@ -1,5 +1,5 @@ #! /bin/sh -# From configure.ac Id: configure.ac 24968 2014-04-06 22:10:58Z hdftest . +# From configure.ac Id: configure.ac 25016 2014-04-11 15:32:58Z derobins . # Guess values for system-dependent variables and create Makefiles. # Generated by GNU Autoconf 2.69 for HDF5 1.8.13-snap8. # @@ -27734,9 +27734,6 @@ rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext ## Try to figure out how to print `long long'. Some machines use `%lld' ## and others use `%qd'. There may be more! The final `l' is a ## default in case none of the others work. -## Need to patch up LD_LIBRARY_PATH so that the execution can find all -## the dynamic library. The correct way to do it should be updating -## LD_LIBRARY_PATH along with LDFLAGS or do it with the AC_TRY_RUN macro. ## { $as_echo "$as_me:${as_lineno-$LINENO}: checking how to print long long" >&5 $as_echo_n "checking how to print long long... " >&6; } @@ -27744,8 +27741,6 @@ if ${hdf5_cv_printf_ll+:} false; then : $as_echo_n "(cached) " >&6 else -LD_LIBRARY_PATH="$LD_LIBRARY_PATH`echo $AM_LDFLAGS $LDFLAGS | sed -e 's/-L/:/g' -e 's/ //g'`" -export LD_LIBRARY_PATH for hdf5_cv_printf_ll in l ll L q unknown; do if test "$cross_compiling" = yes; then : diff --git a/configure.ac b/configure.ac index 45e7c1f..6da1cdb 100644 --- a/configure.ac +++ b/configure.ac @@ -2349,14 +2349,9 @@ AC_TRY_COMPILE(,[ ## Try to figure out how to print `long long'. Some machines use `%lld' ## and others use `%qd'. There may be more! The final `l' is a ## default in case none of the others work. -## Need to patch up LD_LIBRARY_PATH so that the execution can find all -## the dynamic library. The correct way to do it should be updating -## LD_LIBRARY_PATH along with LDFLAGS or do it with the AC_TRY_RUN macro. ## AC_MSG_CHECKING([how to print long long]) AC_CACHE_VAL([hdf5_cv_printf_ll], [ -LD_LIBRARY_PATH="$LD_LIBRARY_PATH`echo $AM_LDFLAGS $LDFLAGS | sed -e 's/-L/:/g' -e 's/ //g'`" -export LD_LIBRARY_PATH for hdf5_cv_printf_ll in l ll L q unknown; do AC_TRY_RUN([ diff --git a/examples/Makefile.am b/examples/Makefile.am index d8eac95..5d0da93 100644 --- a/examples/Makefile.am +++ b/examples/Makefile.am @@ -25,6 +25,10 @@ if BUILD_PARALLEL_CONDITIONAL EXAMPLE_PROG_PARA = ph5example endif +INSTALL_SCRIPT_FILES = run-c-ex.sh +INSTALL_TOP_SCRIPT_FILES = run-all-ex.sh +INSTALL_TOP_FILES = README + # Example programs. # Don't tell automake about them, because if it knew they were programs, # it would try to compile them instead of using the h5cc script. @@ -34,7 +38,8 @@ EXAMPLE_PROG = h5_write h5_read h5_extend_write h5_chunk_read h5_compound \ h5_crtatt h5_crtgrp h5_crtdat \ h5_group h5_select h5_attribute h5_mount h5_reference h5_drivers \ h5_ref2reg h5_extlink h5_elink_unix2win h5_shared_mesg -TEST_SCRIPT=testh5cc.sh +TEST_SCRIPT=testh5cc.sh +TEST_EXAMPLES_SCRIPT=$(INSTALL_SCRIPT_FILES) # Install files # List all file that should be installed in examples directory @@ -45,10 +50,7 @@ INSTALL_FILES = h5_write.c h5_read.c h5_extend_write.c h5_chunk_read.c \ h5_reference.c h5_drivers.c h5_extlink.c h5_elink_unix2win.c \ h5_ref2reg.c h5_shared_mesg.c ph5example.c -INSTALL_SCRIPT_FILES = run-c-ex.sh -INSTALL_TOP_SCRIPT_FILES = run-all-ex.sh -INSTALL_TOP_FILES = README # How to build examples, using installed version of h5cc if BUILD_PARALLEL_CONDITIONAL diff --git a/examples/Makefile.in b/examples/Makefile.in index ae93c78..edf6954 100644 --- a/examples/Makefile.in +++ b/examples/Makefile.in @@ -614,6 +614,9 @@ TRACE = perl $(top_srcdir)/bin/trace # *.clog are from the MPE option. CHECK_CLEANFILES = *.chkexe *.chklog *.clog $(EXTLINK_DIRS) *.h5 @BUILD_PARALLEL_CONDITIONAL_TRUE@EXAMPLE_PROG_PARA = ph5example +INSTALL_SCRIPT_FILES = run-c-ex.sh +INSTALL_TOP_SCRIPT_FILES = run-all-ex.sh +INSTALL_TOP_FILES = README # Example programs. # Don't tell automake about them, because if it knew they were programs, @@ -625,7 +628,8 @@ EXAMPLE_PROG = h5_write h5_read h5_extend_write h5_chunk_read h5_compound \ h5_group h5_select h5_attribute h5_mount h5_reference h5_drivers \ h5_ref2reg h5_extlink h5_elink_unix2win h5_shared_mesg -TEST_SCRIPT = testh5cc.sh +TEST_SCRIPT = testh5cc.sh +TEST_EXAMPLES_SCRIPT = $(INSTALL_SCRIPT_FILES) # Install files # List all file that should be installed in examples directory @@ -636,9 +640,6 @@ INSTALL_FILES = h5_write.c h5_read.c h5_extend_write.c h5_chunk_read.c \ h5_reference.c h5_drivers.c h5_extlink.c h5_elink_unix2win.c \ h5_ref2reg.c h5_shared_mesg.c ph5example.c -INSTALL_SCRIPT_FILES = run-c-ex.sh -INSTALL_TOP_SCRIPT_FILES = run-all-ex.sh -INSTALL_TOP_FILES = README # The external link examples demonstrate how to use paths; they need # directories to be created to do this. @@ -1131,27 +1132,34 @@ install-examples: $(EXAMPLEDIR) $(INSTALL_FILES) uninstall-examples: @if test -n "$(INSTALL_FILES)" -a -d $(EXAMPLEDIR); then \ set -x; cd $(EXAMPLEDIR) && $(RM) $(INSTALL_FILES); \ - fi + fi @if test -n "$(INSTALL_SCRIPT_FILES)" -a -d $(EXAMPLEDIR); then \ set -x; cd $(EXAMPLEDIR) && $(RM) $(INSTALL_SCRIPT_FILES); \ - fi + fi @if test -n "$(INSTALL_TOP_FILES)" -a -d $(EXAMPLETOPDIR); then \ set -x; cd $(EXAMPLETOPDIR) && $(RM) $(INSTALL_TOP_FILES); \ - fi + fi @if test -n "$(INSTALL_TOP_SCRIPT_FILES)" -a -d $(EXAMPLETOPDIR); then \ set -x; cd $(EXAMPLETOPDIR) && $(RM) $(INSTALL_TOP_SCRIPT_FILES); \ - fi + fi installcheck-local: @if test "$(STATIC_SHARED)" = "static, shared"; then \ H5CCFLAGS="-shlib" $(MAKE) $(AM_MAKEFLAGS) check; \ $(MAKE) $(AM_MAKEFLAGS) clean; \ H5CCFLAGS="" $(MAKE) $(AM_MAKEFLAGS) check; \ - elif test "$(STATIC_SHARED)" = "shared"; then \ + elif test "$(STATIC_SHARED)" = "shared"; then \ H5CCFLAGS="-shlib" $(MAKE) $(AM_MAKEFLAGS) check; \ - else \ + else \ $(MAKE) $(AM_MAKEFLAGS) check; \ - fi + fi + @if test "$(INSTALL_FILES)" -a $(TEST_EXAMPLES_SCRIPT) -a -d $(EXAMPLEDIR); then \ + echo "============================"; \ + echo "Testing $(TEST_EXAMPLES_SCRIPT)"; \ + echo "============================"; \ + (cd $(EXAMPLEDIR); \ + /bin/sh ./$(TEST_EXAMPLES_SCRIPT);) \ + fi # lib/progs/tests targets recurse into subdirectories. build-* targets # build files in this directory. diff --git a/fortran/examples/Makefile.am b/fortran/examples/Makefile.am index e994d4e..feed32c 100644 --- a/fortran/examples/Makefile.am +++ b/fortran/examples/Makefile.am @@ -26,6 +26,8 @@ if BUILD_PARALLEL_CONDITIONAL EXAMPLE_PROG_PARA=ph5example endif +INSTALL_SCRIPT_FILES = run-fortran-ex.sh + # These are the programs that 'make all' or 'make tests' will build and # that 'make check' will run. List them in the order in which they should # be run. @@ -41,7 +43,6 @@ INSTALL_FILES=h5_crtdat.f90 h5_rdwt.f90 \ h5_crtatt.f90 h5_crtgrp.f90 h5_crtgrpar.f90 h5_crtgrpd.f90 \ h5_extend.f90 h5_subset.f90 h5_cmprss.f90 hyperslab.f90 selectele.f90 refobjexample.f90 \ refregexample.f90 mountexample.f90 compound.f90 ph5example.f90 -INSTALL_SCRIPT_FILES = run-fortran-ex.sh # Add attention tests for Fortran 2003 features @@ -52,6 +53,7 @@ if FORTRAN_2003_CONDITIONAL_F compound_fortran2003.f90 compound_complex_fortran2003.f90 endif TEST_SCRIPT=testh5fc.sh +TEST_EXAMPLES_SCRIPT=$(INSTALL_SCRIPT_FILES) # Mark this directory as part of the Fortran API FORTRAN_API=yes diff --git a/fortran/examples/Makefile.in b/fortran/examples/Makefile.in index ce2251d..0e69f8e 100644 --- a/fortran/examples/Makefile.in +++ b/fortran/examples/Makefile.in @@ -624,6 +624,7 @@ CHECK_CLEANFILES = *.chkexe *.chklog *.clog *.h5 # Compile parallel fortran examples only if parallel is enabled @BUILD_PARALLEL_CONDITIONAL_TRUE@EXAMPLE_PROG_PARA = ph5example +INSTALL_SCRIPT_FILES = run-fortran-ex.sh # These are the programs that 'make all' or 'make tests' will build and # that 'make check' will run. List them in the order in which they should @@ -641,8 +642,8 @@ INSTALL_FILES = h5_crtdat.f90 h5_rdwt.f90 h5_crtatt.f90 h5_crtgrp.f90 \ h5_cmprss.f90 hyperslab.f90 selectele.f90 refobjexample.f90 \ refregexample.f90 mountexample.f90 compound.f90 ph5example.f90 \ $(am__append_2) -INSTALL_SCRIPT_FILES = run-fortran-ex.sh TEST_SCRIPT = testh5fc.sh +TEST_EXAMPLES_SCRIPT = $(INSTALL_SCRIPT_FILES) # Mark this directory as part of the Fortran API FORTRAN_API = yes @@ -1122,27 +1123,34 @@ install-examples: $(EXAMPLEDIR) $(INSTALL_FILES) uninstall-examples: @if test -n "$(INSTALL_FILES)" -a -d $(EXAMPLEDIR); then \ set -x; cd $(EXAMPLEDIR) && $(RM) $(INSTALL_FILES); \ - fi + fi @if test -n "$(INSTALL_SCRIPT_FILES)" -a -d $(EXAMPLEDIR); then \ set -x; cd $(EXAMPLEDIR) && $(RM) $(INSTALL_SCRIPT_FILES); \ - fi + fi @if test -n "$(INSTALL_TOP_FILES)" -a -d $(EXAMPLETOPDIR); then \ set -x; cd $(EXAMPLETOPDIR) && $(RM) $(INSTALL_TOP_FILES); \ - fi + fi @if test -n "$(INSTALL_TOP_SCRIPT_FILES)" -a -d $(EXAMPLETOPDIR); then \ set -x; cd $(EXAMPLETOPDIR) && $(RM) $(INSTALL_TOP_SCRIPT_FILES); \ - fi + fi installcheck-local: @if test "$(STATIC_SHARED)" = "static, shared"; then \ H5CCFLAGS="-shlib" $(MAKE) $(AM_MAKEFLAGS) check; \ $(MAKE) $(AM_MAKEFLAGS) clean; \ H5CCFLAGS="" $(MAKE) $(AM_MAKEFLAGS) check; \ - elif test "$(STATIC_SHARED)" = "shared"; then \ + elif test "$(STATIC_SHARED)" = "shared"; then \ H5CCFLAGS="-shlib" $(MAKE) $(AM_MAKEFLAGS) check; \ - else \ + else \ $(MAKE) $(AM_MAKEFLAGS) check; \ - fi + fi + @if test "$(INSTALL_FILES)" -a $(TEST_EXAMPLES_SCRIPT) -a -d $(EXAMPLEDIR); then \ + echo "============================"; \ + echo "Testing $(TEST_EXAMPLES_SCRIPT)"; \ + echo "============================"; \ + (cd $(EXAMPLEDIR); \ + /bin/sh ./$(TEST_EXAMPLES_SCRIPT);) \ + fi # lib/progs/tests targets recurse into subdirectories. build-* targets # build files in this directory. diff --git a/fortran/examples/run-fortran-ex.sh.in b/fortran/examples/run-fortran-ex.sh.in index c5c379e..ead7361 100644 --- a/fortran/examples/run-fortran-ex.sh.in +++ b/fortran/examples/run-fortran-ex.sh.in @@ -63,19 +63,15 @@ RunTest() ./$TEST_EXEC } - +F2003_ENABLED=@HAVE_FORTRAN_2003@ ################## MAIN ################## # Run tests if [ $? -eq 0 ] then - if (RunTest h5_cmprss &&\ - rm h5_cmprss &&\ - RunTest h5_crtdat &&\ + if (RunTest h5_crtdat &&\ rm h5_crtdat &&\ - RunTest h5_extend &&\ - rm h5_extend &&\ RunTest h5_rdwt &&\ rm h5_rdwt &&\ RunTest h5_crtatt &&\ @@ -86,14 +82,16 @@ then rm h5_crtgrpar &&\ RunTest h5_crtgrpd &&\ rm h5_crtgrpd &&\ + RunTest h5_extend &&\ + rm h5_extend &&\ RunTest h5_subset &&\ rm h5_subset &&\ + RunTest h5_cmprss &&\ + rm h5_cmprss &&\ RunTest hyperslab &&\ rm hyperslab &&\ RunTest selectele &&\ rm selectele &&\ - RunTest grpit &&\ - rm grpit &&\ RunTest refobjexample &&\ rm refobjexample &&\ RunTest refregexample &&\ @@ -108,6 +106,24 @@ then fi fi +if [ $EXIT_VALUE -eq ${EXIT_SUCCESS} -a "$F2003_ENABLED" = "yes" ] +then +# Add attention tests for Fortran 2003 features + if (RunTest rwdset_fortran2003 &&\ + rm rwdset_fortran2003 &&\ + RunTest nested_derived_type &&\ + rm nested_derived_type &&\ + RunTest compound_fortran2003 &&\ + rm compound_fortran2003 &&\ + RunTest compound_complex_fortran2003 &&\ + rm compound_complex_fortran2003); then + EXIT_VALUE=${EXIT_SUCCESS} + else + EXIT_VALUE=${EXIT_FAILURE} + fi +fi + + # Cleanup rm *.o rm *.h5 diff --git a/hl/c++/examples/Makefile.am b/hl/c++/examples/Makefile.am index df15257..c8f0305 100644 --- a/hl/c++/examples/Makefile.am +++ b/hl/c++/examples/Makefile.am @@ -24,6 +24,7 @@ include $(top_srcdir)/config/commence.am # These are the programs that 'make all' or 'make prog' will build and # which 'make check' will run. List them in the order they should be run. EXAMPLE_PROG=ptExampleFL +TEST_EXAMPLES_SCRIPT=$(INSTALL_SCRIPT_FILES) # These are the example files to be installed INSTALL_FILES=ptExampleFL.cpp diff --git a/hl/c++/examples/Makefile.in b/hl/c++/examples/Makefile.in index df7bc7a..fa624d1 100644 --- a/hl/c++/examples/Makefile.in +++ b/hl/c++/examples/Makefile.in @@ -616,6 +616,7 @@ CHECK_CLEANFILES = *.chkexe *.chklog *.clog *.h5 # These are the programs that 'make all' or 'make prog' will build and # which 'make check' will run. List them in the order they should be run. EXAMPLE_PROG = ptExampleFL +TEST_EXAMPLES_SCRIPT = $(INSTALL_SCRIPT_FILES) # These are the example files to be installed INSTALL_FILES = ptExampleFL.cpp @@ -1065,27 +1066,34 @@ install-examples: $(EXAMPLEDIR) $(INSTALL_FILES) uninstall-examples: @if test -n "$(INSTALL_FILES)" -a -d $(EXAMPLEDIR); then \ set -x; cd $(EXAMPLEDIR) && $(RM) $(INSTALL_FILES); \ - fi + fi @if test -n "$(INSTALL_SCRIPT_FILES)" -a -d $(EXAMPLEDIR); then \ set -x; cd $(EXAMPLEDIR) && $(RM) $(INSTALL_SCRIPT_FILES); \ - fi + fi @if test -n "$(INSTALL_TOP_FILES)" -a -d $(EXAMPLETOPDIR); then \ set -x; cd $(EXAMPLETOPDIR) && $(RM) $(INSTALL_TOP_FILES); \ - fi + fi @if test -n "$(INSTALL_TOP_SCRIPT_FILES)" -a -d $(EXAMPLETOPDIR); then \ set -x; cd $(EXAMPLETOPDIR) && $(RM) $(INSTALL_TOP_SCRIPT_FILES); \ - fi + fi installcheck-local: @if test "$(STATIC_SHARED)" = "static, shared"; then \ H5CCFLAGS="-shlib" $(MAKE) $(AM_MAKEFLAGS) check; \ $(MAKE) $(AM_MAKEFLAGS) clean; \ H5CCFLAGS="" $(MAKE) $(AM_MAKEFLAGS) check; \ - elif test "$(STATIC_SHARED)" = "shared"; then \ + elif test "$(STATIC_SHARED)" = "shared"; then \ H5CCFLAGS="-shlib" $(MAKE) $(AM_MAKEFLAGS) check; \ - else \ + else \ $(MAKE) $(AM_MAKEFLAGS) check; \ - fi + fi + @if test "$(INSTALL_FILES)" -a $(TEST_EXAMPLES_SCRIPT) -a -d $(EXAMPLEDIR); then \ + echo "============================"; \ + echo "Testing $(TEST_EXAMPLES_SCRIPT)"; \ + echo "============================"; \ + (cd $(EXAMPLEDIR); \ + /bin/sh ./$(TEST_EXAMPLES_SCRIPT);) \ + fi # lib/progs/tests targets recurse into subdirectories. build-* targets # build files in this directory. diff --git a/hl/examples/Makefile.am b/hl/examples/Makefile.am index 5108c5e..ba200ed 100644 --- a/hl/examples/Makefile.am +++ b/hl/examples/Makefile.am @@ -29,6 +29,8 @@ endif # Note: no '/' after DESTDIR. Explanation in commence.am EXAMPLEDIR=${DESTDIR}$(exec_prefix)/share/hdf5_examples/hl/c EXAMPLETOPDIR=${DESTDIR}$(exec_prefix)/share/hdf5_examples/hl +INSTALL_SCRIPT_FILES = run-hlc-ex.sh +INSTALL_TOP_SCRIPT_FILES = run-hl-ex.sh # Example programs. # Don't tell automake about them, because if it knew they were programs, @@ -40,6 +42,7 @@ EXAMPLE_PROG = ex_lite1 ex_lite2 ex_lite3 ptExampleFL \ ex_table_05 ex_table_06 ex_table_07 ex_table_08 \ ex_table_09 ex_table_10 ex_table_11 ex_table_12 \ ex_ds1 +TEST_EXAMPLES_SCRIPT=$(INSTALL_SCRIPT_FILES) # Install files # List all file that should be installed in examples directory @@ -50,8 +53,6 @@ INSTALL_FILES = ex_lite1.c ex_lite2.c ex_lite3.c ptExampleFL.c \ ex_table_09.c ex_table_10.c ex_table_11.c ex_table_12.c \ ex_ds1.c image24pixel.txt image8.txt pal_rgb.h -INSTALL_SCRIPT_FILES = run-hlc-ex.sh -INSTALL_TOP_SCRIPT_FILES = run-hl-ex.sh # Additional dependencies for each program are listed below. if BUILD_PARALLEL_CONDITIONAL diff --git a/hl/examples/Makefile.in b/hl/examples/Makefile.in index ea3ff07..3e24269 100644 --- a/hl/examples/Makefile.in +++ b/hl/examples/Makefile.in @@ -618,6 +618,8 @@ CHECK_CLEANFILES = *.chkexe *.chklog *.clog *.h5 # Note: no '/' after DESTDIR. Explanation in commence.am EXAMPLEDIR = ${DESTDIR}$(exec_prefix)/share/hdf5_examples/hl/c EXAMPLETOPDIR = ${DESTDIR}$(exec_prefix)/share/hdf5_examples/hl +INSTALL_SCRIPT_FILES = run-hlc-ex.sh +INSTALL_TOP_SCRIPT_FILES = run-hl-ex.sh # Example programs. # Don't tell automake about them, because if it knew they were programs, @@ -630,6 +632,7 @@ EXAMPLE_PROG = ex_lite1 ex_lite2 ex_lite3 ptExampleFL \ ex_table_09 ex_table_10 ex_table_11 ex_table_12 \ ex_ds1 +TEST_EXAMPLES_SCRIPT = $(INSTALL_SCRIPT_FILES) # Install files # List all file that should be installed in examples directory @@ -640,8 +643,6 @@ INSTALL_FILES = ex_lite1.c ex_lite2.c ex_lite3.c ptExampleFL.c \ ex_table_09.c ex_table_10.c ex_table_11.c ex_table_12.c \ ex_ds1.c image24pixel.txt image8.txt pal_rgb.h -INSTALL_SCRIPT_FILES = run-hlc-ex.sh -INSTALL_TOP_SCRIPT_FILES = run-hl-ex.sh @BUILD_SHARED_SZIP_CONDITIONAL_TRUE@LD_LIBRARY_PATH = $(LL_PATH) # Assume that all tests in this directory are examples, and tell @@ -1105,27 +1106,34 @@ install-examples: $(EXAMPLEDIR) $(INSTALL_FILES) uninstall-examples: @if test -n "$(INSTALL_FILES)" -a -d $(EXAMPLEDIR); then \ set -x; cd $(EXAMPLEDIR) && $(RM) $(INSTALL_FILES); \ - fi + fi @if test -n "$(INSTALL_SCRIPT_FILES)" -a -d $(EXAMPLEDIR); then \ set -x; cd $(EXAMPLEDIR) && $(RM) $(INSTALL_SCRIPT_FILES); \ - fi + fi @if test -n "$(INSTALL_TOP_FILES)" -a -d $(EXAMPLETOPDIR); then \ set -x; cd $(EXAMPLETOPDIR) && $(RM) $(INSTALL_TOP_FILES); \ - fi + fi @if test -n "$(INSTALL_TOP_SCRIPT_FILES)" -a -d $(EXAMPLETOPDIR); then \ set -x; cd $(EXAMPLETOPDIR) && $(RM) $(INSTALL_TOP_SCRIPT_FILES); \ - fi + fi installcheck-local: @if test "$(STATIC_SHARED)" = "static, shared"; then \ H5CCFLAGS="-shlib" $(MAKE) $(AM_MAKEFLAGS) check; \ $(MAKE) $(AM_MAKEFLAGS) clean; \ H5CCFLAGS="" $(MAKE) $(AM_MAKEFLAGS) check; \ - elif test "$(STATIC_SHARED)" = "shared"; then \ + elif test "$(STATIC_SHARED)" = "shared"; then \ H5CCFLAGS="-shlib" $(MAKE) $(AM_MAKEFLAGS) check; \ - else \ + else \ $(MAKE) $(AM_MAKEFLAGS) check; \ - fi + fi + @if test "$(INSTALL_FILES)" -a $(TEST_EXAMPLES_SCRIPT) -a -d $(EXAMPLEDIR); then \ + echo "============================"; \ + echo "Testing $(TEST_EXAMPLES_SCRIPT)"; \ + echo "============================"; \ + (cd $(EXAMPLEDIR); \ + /bin/sh ./$(TEST_EXAMPLES_SCRIPT);) \ + fi # lib/progs/tests targets recurse into subdirectories. build-* targets # build files in this directory. diff --git a/hl/fortran/examples/Makefile.am b/hl/fortran/examples/Makefile.am index f94f031..91cb7c5 100644 --- a/hl/fortran/examples/Makefile.am +++ b/hl/fortran/examples/Makefile.am @@ -32,6 +32,7 @@ endif # We don't tell automake about these programs so that it doesn't try to # compile them with the regular fortran compiler. EXAMPLE_PROG=exlite ex_ds1 +TEST_EXAMPLES_SCRIPT=$(INSTALL_SCRIPT_FILES) # List files to be installed here INSTALL_FILES= exlite.f90 ex_ds1.f90 diff --git a/hl/fortran/examples/Makefile.in b/hl/fortran/examples/Makefile.in index a66b5b9..e83f717 100644 --- a/hl/fortran/examples/Makefile.in +++ b/hl/fortran/examples/Makefile.in @@ -622,6 +622,7 @@ CHECK_CLEANFILES = *.chkexe *.chklog *.clog *.h5 # We don't tell automake about these programs so that it doesn't try to # compile them with the regular fortran compiler. EXAMPLE_PROG = exlite ex_ds1 +TEST_EXAMPLES_SCRIPT = $(INSTALL_SCRIPT_FILES) # List files to be installed here INSTALL_FILES = exlite.f90 ex_ds1.f90 @@ -1068,27 +1069,34 @@ install-examples: $(EXAMPLEDIR) $(INSTALL_FILES) uninstall-examples: @if test -n "$(INSTALL_FILES)" -a -d $(EXAMPLEDIR); then \ set -x; cd $(EXAMPLEDIR) && $(RM) $(INSTALL_FILES); \ - fi + fi @if test -n "$(INSTALL_SCRIPT_FILES)" -a -d $(EXAMPLEDIR); then \ set -x; cd $(EXAMPLEDIR) && $(RM) $(INSTALL_SCRIPT_FILES); \ - fi + fi @if test -n "$(INSTALL_TOP_FILES)" -a -d $(EXAMPLETOPDIR); then \ set -x; cd $(EXAMPLETOPDIR) && $(RM) $(INSTALL_TOP_FILES); \ - fi + fi @if test -n "$(INSTALL_TOP_SCRIPT_FILES)" -a -d $(EXAMPLETOPDIR); then \ set -x; cd $(EXAMPLETOPDIR) && $(RM) $(INSTALL_TOP_SCRIPT_FILES); \ - fi + fi installcheck-local: @if test "$(STATIC_SHARED)" = "static, shared"; then \ H5CCFLAGS="-shlib" $(MAKE) $(AM_MAKEFLAGS) check; \ $(MAKE) $(AM_MAKEFLAGS) clean; \ H5CCFLAGS="" $(MAKE) $(AM_MAKEFLAGS) check; \ - elif test "$(STATIC_SHARED)" = "shared"; then \ + elif test "$(STATIC_SHARED)" = "shared"; then \ H5CCFLAGS="-shlib" $(MAKE) $(AM_MAKEFLAGS) check; \ - else \ + else \ $(MAKE) $(AM_MAKEFLAGS) check; \ - fi + fi + @if test "$(INSTALL_FILES)" -a $(TEST_EXAMPLES_SCRIPT) -a -d $(EXAMPLEDIR); then \ + echo "============================"; \ + echo "Testing $(TEST_EXAMPLES_SCRIPT)"; \ + echo "============================"; \ + (cd $(EXAMPLEDIR); \ + /bin/sh ./$(TEST_EXAMPLES_SCRIPT);) \ + fi # lib/progs/tests targets recurse into subdirectories. build-* targets # build files in this directory. diff --git a/perform/pio_engine.c b/perform/pio_engine.c index 82d1bb8..3535fb4 100644 --- a/perform/pio_engine.c +++ b/perform/pio_engine.c @@ -437,7 +437,7 @@ pio_create_filename(iotype iot, const char *base_name, char *fullname, size_t si subdir = (user ? user : login); if (subdir) { - for (i = 0; i < size && prefix[i]; i++) + for (i = 0; i < size-1 && prefix[i]; i++) fullname[i] = prefix[i]; fullname[i++] = '/'; diff --git a/perform/sio_engine.c b/perform/sio_engine.c index dec2f98..07e6b16c 100644 --- a/perform/sio_engine.c +++ b/perform/sio_engine.c @@ -333,7 +333,7 @@ sio_create_filename(iotype iot, const char *base_name, char *fullname, size_t si subdir = (user ? user : login); if (subdir) { - for (i = 0; i < size && prefix[i]; i++) + for (i = 0; i < size-1 && prefix[i]; i++) fullname[i] = prefix[i]; fullname[i++] = '/'; |