diff options
102 files changed, 4081 insertions, 2821 deletions
@@ -2175,6 +2175,28 @@ ./tools/testfiles/zerodim.ddl ./tools/testfiles/zerodim.h5 +# h5dump new reference validation +./tools/testfiles/trefer_attrR.ddl +./tools/testfiles/trefer_compatR.ddl +./tools/testfiles/trefer_extR.ddl +./tools/testfiles/trefer_grpR.ddl +./tools/testfiles/trefer_obj_delR.ddl +./tools/testfiles/trefer_objR.ddl +./tools/testfiles/trefer_paramR.ddl +./tools/testfiles/trefer_reg_1dR.ddl +./tools/testfiles/trefer_regR.ddl +# h5dump and h5diff new reference files +./tools/testfiles/trefer_attr.h5 +./tools/testfiles/trefer_compat.h5 +./tools/testfiles/trefer_ext1.h5 +./tools/testfiles/trefer_ext2.h5 +./tools/testfiles/trefer_grp.h5 +./tools/testfiles/trefer_obj_del.h5 +./tools/testfiles/trefer_obj.h5 +./tools/testfiles/trefer_param.h5 +./tools/testfiles/trefer_reg_1d.h5 +./tools/testfiles/trefer_reg.h5 + # Expected output from h5ls tests ./tools/testfiles/nosuchfile.ls ./tools/testfiles/help-1.ls @@ -2355,6 +2377,7 @@ ./tools/test/h5diff/testfiles/h5diff_56.txt ./tools/test/h5diff/testfiles/h5diff_57.txt ./tools/test/h5diff/testfiles/h5diff_58.txt +./tools/test/h5diff/testfiles/h5diff_58_ref.txt ./tools/test/h5diff/testfiles/h5diff_59.txt ./tools/test/h5diff/testfiles/h5diff_60.txt ./tools/test/h5diff/testfiles/h5diff_61.txt @@ -2573,6 +2596,8 @@ ./tools/test/h5diff/testfiles/h5diff_v1.txt ./tools/test/h5diff/testfiles/h5diff_v2.txt ./tools/test/h5diff/testfiles/h5diff_v3.txt +#reg_ref +./tools/test/h5diff/testfiles/h5diff_reg.txt #test files for h5repack ./tools/test/h5repack/testfiles/README diff --git a/config/cmake/jrunTest.cmake b/config/cmake/jrunTest.cmake index ee4517c..0315536 100644 --- a/config/cmake/jrunTest.cmake +++ b/config/cmake/jrunTest.cmake @@ -75,16 +75,19 @@ message (STATUS "COMMAND Result: ${TEST_RESULT}") # if the .err file exists and ERRROR_APPEND is enabled if (EXISTS "${TEST_FOLDER}/${TEST_OUTPUT}.err") file (READ ${TEST_FOLDER}/${TEST_OUTPUT}.err TEST_STREAM) - if (TEST_MASK_FILE) - STRING(REGEX REPLACE "CurrentDir is [^\n]+\n" "CurrentDir is (dir name)\n" TEST_STREAM "${TEST_STREAM}") - endif () + list(LENGTH TEST_STREAM test_len) + if (test_len GREATER 0) + if (TEST_MASK_FILE) + STRING(REGEX REPLACE "CurrentDir is [^\n]+\n" "CurrentDir is (dir name)\n" TEST_STREAM "${TEST_STREAM}") + endif () - if (NOT ERROR_APPEND) - # write back to original .err file - file (WRITE ${TEST_FOLDER}/${TEST_OUTPUT}.err "${TEST_STREAM}") - else () - # append error output to the stdout output file - file (APPEND ${TEST_FOLDER}/${TEST_OUTPUT} "${TEST_STREAM}") + if (NOT ERROR_APPEND) + # write back to original .err file + file (WRITE ${TEST_FOLDER}/${TEST_OUTPUT}.err "${TEST_STREAM}") + else () + # append error output to the stdout output file + file (APPEND ${TEST_FOLDER}/${TEST_OUTPUT} "${TEST_STREAM}") + endif () endif () endif () @@ -122,150 +125,172 @@ endif () message (STATUS "COMMAND Error: ${TEST_ERROR}") # compare output files to references unless this must be skipped +set (TEST_COMPARE_RESULT 0) if (NOT TEST_SKIP_COMPARE) if (EXISTS "${TEST_FOLDER}/${TEST_REFERENCE}") - if (WIN32 OR MINGW) - configure_file(${TEST_FOLDER}/${TEST_REFERENCE} ${TEST_FOLDER}/${TEST_REFERENCE}.tmp NEWLINE_STYLE CRLF) - if (EXISTS "${TEST_FOLDER}/${TEST_REFERENCE}.tmp") - file(RENAME ${TEST_FOLDER}/${TEST_REFERENCE}.tmp ${TEST_FOLDER}/${TEST_REFERENCE}) + file (READ ${TEST_FOLDER}/${TEST_REFERENCE} TEST_STREAM) + list(LENGTH TEST_STREAM test_len) + if (test_len GREATER 0) + if (WIN32 OR MINGW) + configure_file(${TEST_FOLDER}/${TEST_REFERENCE} ${TEST_FOLDER}/${TEST_REFERENCE}.tmp NEWLINE_STYLE CRLF) + if (EXISTS "${TEST_FOLDER}/${TEST_REFERENCE}.tmp") + file(RENAME ${TEST_FOLDER}/${TEST_REFERENCE}.tmp ${TEST_FOLDER}/${TEST_REFERENCE}) + endif () + #file (READ ${TEST_FOLDER}/${TEST_REFERENCE} TEST_STREAM) + #file (WRITE ${TEST_FOLDER}/${TEST_REFERENCE} "${TEST_STREAM}") endif () - #file (READ ${TEST_FOLDER}/${TEST_REFERENCE} TEST_STREAM) - #file (WRITE ${TEST_FOLDER}/${TEST_REFERENCE} "${TEST_STREAM}") - endif () - if (NOT TEST_SORT_COMPARE) - # now compare the output with the reference - execute_process ( - COMMAND ${CMAKE_COMMAND} -E compare_files ${TEST_FOLDER}/${TEST_OUTPUT} ${TEST_FOLDER}/${TEST_REFERENCE} - RESULT_VARIABLE TEST_RESULT - ) - else () - file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} v1) - file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} v2) - list (SORT v1) - list (SORT v2) - if (NOT v1 STREQUAL v2) - set(TEST_RESULT 1) + if (NOT TEST_SORT_COMPARE) + # now compare the output with the reference + execute_process ( + COMMAND ${CMAKE_COMMAND} -E compare_files ${TEST_FOLDER}/${TEST_OUTPUT} ${TEST_FOLDER}/${TEST_REFERENCE} + RESULT_VARIABLE TEST_COMPARE_RESULT + ) + else () + file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} v1) + file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} v2) + list (SORT v1) + list (SORT v2) + if (NOT v1 STREQUAL v2) + set(TEST_COMPARE_RESULT 1) + endif () endif () - endif () - if (TEST_RESULT) - set (TEST_RESULT 0) - file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} test_act) - list (LENGTH test_act len_act) - file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} test_ref) - list (LENGTH test_ref len_ref) - if (len_act GREATER 0 AND len_ref GREATER 0) - math (EXPR _FP_LEN "${len_ref} - 1") - foreach (line RANGE 0 ${_FP_LEN}) - list (GET test_act ${line} str_act) - list (GET test_ref ${line} str_ref) - if (NOT str_act STREQUAL str_ref) - if (str_act) - set (TEST_RESULT 1) - message (STATUS "line = ${line}\n***ACTUAL: ${str_act}\n****REFER: ${str_ref}\n") + if (TEST_COMPARE_RESULT) + set (TEST_COMPARE_RESULT 0) + file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} test_act) + list (LENGTH test_act len_act) + file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} test_ref) + list (LENGTH test_ref len_ref) + if (len_act GREATER 0 AND len_ref GREATER 0) + math (EXPR _FP_LEN "${len_ref} - 1") + foreach (line RANGE 0 ${_FP_LEN}) + list (GET test_act ${line} str_act) + list (GET test_ref ${line} str_ref) + if (NOT str_act STREQUAL str_ref) + if (str_act) + set (TEST_COMPARE_RESULT 1) + message (STATUS "line = ${line}\n***ACTUAL: ${str_act}\n****REFER: ${str_ref}\n") + endif () endif () + endforeach () + else () + if (len_act EQUAL 0) + message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_OUTPUT} is empty") + endif () + if (len_ref EQUAL 0) + message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_REFERENCE} is empty") endif () - endforeach () - else () - if (len_act EQUAL 0) - message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_OUTPUT} is empty") endif () - if (len_ref EQUAL 0) - message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_REFERENCE} is empty") + if (NOT len_act EQUAL len_ref) + set (TEST_COMPARE_RESULT 1) endif () endif () - if (NOT len_act EQUAL len_ref) - set (TEST_RESULT 1) - endif () endif () - message (STATUS "COMPARE Result: ${TEST_RESULT}") + message (STATUS "COMPARE Result: ${TEST_COMPARE_RESULT}") # again, if return value is !=0 scream and shout - if (TEST_RESULT) + if (TEST_COMPARE_RESULT) message (FATAL_ERROR "Failed: The output of ${TEST_OUTPUT} did not match ${TEST_REFERENCE}") endif () endif () # now compare the .err file with the error reference, if supplied + set (TEST_ERRREF_RESULT 0) if (TEST_ERRREF) - if (WIN32 OR MINGW) - configure_file(${TEST_FOLDER}/${TEST_ERRREF} ${TEST_FOLDER}/${TEST_ERRREF}.tmp NEWLINE_STYLE CRLF) - if (EXISTS "${TEST_FOLDER}/${TEST_ERRREF}.tmp") - file(RENAME ${TEST_FOLDER}/${TEST_ERRREF}.tmp ${TEST_FOLDER}/${TEST_ERRREF}) + file (READ ${TEST_FOLDER}/${TEST_ERRREF} TEST_STREAM) + list(LENGTH TEST_STREAM test_len) + if (test_len GREATER 0) + if (WIN32 OR MINGW) + configure_file(${TEST_FOLDER}/${TEST_ERRREF} ${TEST_FOLDER}/${TEST_ERRREF}.tmp NEWLINE_STYLE CRLF) + if (EXISTS "${TEST_FOLDER}/${TEST_ERRREF}.tmp") + file(RENAME ${TEST_FOLDER}/${TEST_ERRREF}.tmp ${TEST_FOLDER}/${TEST_ERRREF}) + endif () + #file (READ ${TEST_FOLDER}/${TEST_ERRREF} TEST_STREAM) + #file (WRITE ${TEST_FOLDER}/${TEST_ERRREF} "${TEST_STREAM}") endif () - #file (READ ${TEST_FOLDER}/${TEST_ERRREF} TEST_STREAM) - #file (WRITE ${TEST_FOLDER}/${TEST_ERRREF} "${TEST_STREAM}") - endif () - # now compare the error output with the error reference - execute_process ( - COMMAND ${CMAKE_COMMAND} -E compare_files ${TEST_FOLDER}/${TEST_OUTPUT}.err ${TEST_FOLDER}/${TEST_ERRREF} - RESULT_VARIABLE TEST_RESULT - ) - if (TEST_RESULT) - set (TEST_RESULT 0) - file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT}.err test_act) - list (LENGTH test_act len_act) - file (STRINGS ${TEST_FOLDER}/${TEST_ERRREF} test_ref) - list (LENGTH test_ref len_ref) - math (EXPR _FP_LEN "${len_ref} - 1") - if (len_act GREATER 0 AND len_ref GREATER 0) + # now compare the error output with the error reference + execute_process ( + COMMAND ${CMAKE_COMMAND} -E compare_files ${TEST_FOLDER}/${TEST_OUTPUT}.err ${TEST_FOLDER}/${TEST_ERRREF} + RESULT_VARIABLE TEST_ERRREF_RESULT + ) + if (TEST_ERRREF_RESULT) + set (TEST_ERRREF_RESULT 0) + file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT}.err test_act) + list (LENGTH test_act len_act) + file (STRINGS ${TEST_FOLDER}/${TEST_ERRREF} test_ref) + list (LENGTH test_ref len_ref) math (EXPR _FP_LEN "${len_ref} - 1") - foreach (line RANGE 0 ${_FP_LEN}) - list (GET test_act ${line} str_act) - list (GET test_ref ${line} str_ref) - if (NOT str_act STREQUAL str_ref) - if (str_act) - set (TEST_RESULT 1) - message (STATUS "line = ${line}\n***ACTUAL: ${str_act}\n****REFER: ${str_ref}\n") + if (len_act GREATER 0 AND len_ref GREATER 0) + math (EXPR _FP_LEN "${len_ref} - 1") + foreach (line RANGE 0 ${_FP_LEN}) + list (GET test_act ${line} str_act) + list (GET test_ref ${line} str_ref) + if (NOT str_act STREQUAL str_ref) + if (str_act) + set (TEST_ERRREF_RESULT 1) + message (STATUS "line = ${line}\n***ACTUAL: ${str_act}\n****REFER: ${str_ref}\n") + endif () endif () + endforeach () + else () + if (len_act EQUAL 0) + message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_OUTPUT}.err is empty") + endif () + if (len_ref EQUAL 0) + message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_ERRREF} is empty") endif () - endforeach () - else () - if (len_act EQUAL 0) - message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_OUTPUT}.err is empty") endif () - if (len_ref EQUAL 0) - message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_ERRREF} is empty") + if (NOT len_act EQUAL len_ref) + set (TEST_ERRREF_RESULT 1) endif () endif () - if (NOT len_act EQUAL len_ref) - set (TEST_RESULT 1) - endif () endif () - message (STATUS "COMPARE Result: ${TEST_RESULT}") + message (STATUS "COMPARE Result: ${TEST_ERRREF_RESULT}") # again, if return value is !=0 scream and shout - if (TEST_RESULT) + if (TEST_ERRREF_RESULT) message (FATAL_ERROR "Failed: The error output of ${TEST_OUTPUT}.err did not match ${TEST_ERRREF}") endif () endif () endif () +set (TEST_GREP_RESULT 0) if (TEST_GREP_COMPARE) # now grep the output with the reference file (READ ${TEST_FOLDER}/${TEST_OUTPUT} TEST_STREAM) + list(LENGTH TEST_STREAM test_len) + if (test_len GREATER 0) + # TEST_REFERENCE should always be matched + string (REGEX MATCH "${TEST_REFERENCE}" TEST_MATCH ${TEST_STREAM}) + string (COMPARE EQUAL "${TEST_REFERENCE}" "${TEST_MATCH}" TEST_GREP_RESULT) + if (NOT TEST_GREP_RESULT) + message (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did not contain ${TEST_REFERENCE}") + endif () - # TEST_REFERENCE should always be matched - string (REGEX MATCH "${TEST_REFERENCE}" TEST_MATCH ${TEST_STREAM}) - string (COMPARE EQUAL "${TEST_REFERENCE}" "${TEST_MATCH}" TEST_RESULT) - if (NOT TEST_RESULT) - message (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did not contain ${TEST_REFERENCE}") - endif () - - string (REGEX MATCH "${TEST_FILTER}" TEST_MATCH ${TEST_STREAM}) - if (TEST_EXPECT) - # TEST_EXPECT (1) interprets TEST_FILTER as; NOT to match - string (LENGTH "${TEST_MATCH}" TEST_RESULT) - if (TEST_RESULT) - message (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did contain ${TEST_FILTER}") + string (REGEX MATCH "${TEST_FILTER}" TEST_MATCH ${TEST_STREAM}) + if (TEST_EXPECT) + # TEST_EXPECT (1) interprets TEST_FILTER as; NOT to match + string (LENGTH "${TEST_MATCH}" TEST_GREP_RESULT) + if (TEST_GREP_RESULT) + message (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did contain ${TEST_FILTER}") + endif () endif () endif () endif () +# dump the output unless nodisplay option is set +if (TEST_SKIP_COMPARE AND NOT TEST_NO_DISPLAY) + file (READ ${TEST_FOLDER}/${TEST_OUTPUT} TEST_STREAM) + execute_process ( + COMMAND ${CMAKE_COMMAND} -E echo ${TEST_STREAM} + RESULT_VARIABLE TEST_RESULT + ) +endif () + # everything went fine... message (STATUS "${TEST_PROGRAM} Passed") diff --git a/config/cmake/vfdTest.cmake b/config/cmake/vfdTest.cmake index 12ee40b..c07d005 100644 --- a/config/cmake/vfdTest.cmake +++ b/config/cmake/vfdTest.cmake @@ -64,7 +64,7 @@ if (NOT TEST_RESULT EQUAL TEST_EXPECT) if (NOT TEST_NOERRDISPLAY) if (EXISTS "${TEST_FOLDER}/${TEST_OUTPUT}_${TEST_VFD}.out") file (READ ${TEST_FOLDER}/${TEST_OUTPUT}_${TEST_VFD}.out TEST_STREAM) - message (STATUS "Output USING ${TEST_VFD}:\n${TEST_STREAM}") + message (STATUS "Output USING ${TEST_VFD}:\n${TEST_STREAM}") endif () endif () message (FATAL_ERROR "Failed: Test program ${TEST_PROGRAM} exited != ${TEST_EXPECT}.\n${TEST_ERROR}") diff --git a/config/cmake/volTest.cmake b/config/cmake/volTest.cmake index 1dcd2b1..e735109 100644 --- a/config/cmake/volTest.cmake +++ b/config/cmake/volTest.cmake @@ -64,7 +64,7 @@ if (NOT TEST_RESULT EQUAL TEST_EXPECT) if (NOT TEST_NOERRDISPLAY) if (EXISTS "${TEST_FOLDER}/${TEST_OUTPUT}.out") file (READ ${TEST_FOLDER}/${TEST_OUTPUT}.out TEST_STREAM) - message (STATUS "Output USING ${TEST_VOL}:\n${TEST_STREAM}") + message (STATUS "Output USING ${TEST_VOL}:\n${TEST_STREAM}") endif () endif () message (FATAL_ERROR "Failed: Test program ${TEST_PROGRAM} exited != ${TEST_EXPECT}.\n${TEST_ERROR}") diff --git a/config/cmake_ext_mod/grepTest.cmake b/config/cmake_ext_mod/grepTest.cmake index a6f1c7f..c65c951 100644 --- a/config/cmake_ext_mod/grepTest.cmake +++ b/config/cmake_ext_mod/grepTest.cmake @@ -82,93 +82,102 @@ if (TEST_FIND_RESULT GREATER 0) endif () # if the TEST_ERRREF exists grep the error output with the error reference +set (TEST_ERRREF_RESULT 0) if (TEST_ERRREF) # if the .err file exists grep the error output with the error reference before comparing stdout if (EXISTS "${TEST_FOLDER}/${TEST_OUTPUT}.err") file (READ ${TEST_FOLDER}/${TEST_OUTPUT}.err TEST_ERR_STREAM) - - # TEST_ERRREF should always be matched - string (REGEX MATCH "${TEST_ERRREF}" TEST_MATCH ${TEST_ERR_STREAM}) - string (COMPARE EQUAL "${TEST_ERRREF}" "${TEST_MATCH}" TEST_RESULT) - if (NOT TEST_RESULT) - message (FATAL_ERROR "Failed: The error output of ${TEST_PROGRAM} did not contain ${TEST_ERRREF}") + list(LENGTH TEST_ERR_STREAM test_len) + if (test_len GREATER 0) + # TEST_ERRREF should always be matched + string (REGEX MATCH "${TEST_ERRREF}" TEST_MATCH ${TEST_ERR_STREAM}) + string (COMPARE EQUAL "${TEST_ERRREF}" "${TEST_MATCH}" TEST_ERRREF_RESULT) + if (NOT TEST_ERRREF_RESULT) + message (FATAL_ERROR "Failed: The error output of ${TEST_PROGRAM} did not contain ${TEST_ERRREF}") + endif () endif () endif () #always compare output file to reference unless this must be skipped + set (TEST_COMPARE_RESULT 0) if (NOT TEST_SKIP_COMPARE) if (EXISTS "${TEST_FOLDER}/${TEST_REFERENCE}") - if (WIN32 OR MINGW) - configure_file(${TEST_FOLDER}/${TEST_REFERENCE} ${TEST_FOLDER}/${TEST_REFERENCE}.tmp NEWLINE_STYLE CRLF) - if (EXISTS "${TEST_FOLDER}/${TEST_REFERENCE}.tmp") - file(RENAME ${TEST_FOLDER}/${TEST_REFERENCE}.tmp ${TEST_FOLDER}/${TEST_REFERENCE}) + file (READ ${TEST_FOLDER}/${TEST_REFERENCE} TEST_STREAM) + list(LENGTH TEST_STREAM test_len) + if (test_len GREATER 0) + if (WIN32 OR MINGW) + configure_file(${TEST_FOLDER}/${TEST_REFERENCE} ${TEST_FOLDER}/${TEST_REFERENCE}.tmp NEWLINE_STYLE CRLF) + if (EXISTS "${TEST_FOLDER}/${TEST_REFERENCE}.tmp") + file(RENAME ${TEST_FOLDER}/${TEST_REFERENCE}.tmp ${TEST_FOLDER}/${TEST_REFERENCE}) + endif () + #file (READ ${TEST_FOLDER}/${TEST_REFERENCE} TEST_STREAM) + #file (WRITE ${TEST_FOLDER}/${TEST_REFERENCE} "${TEST_STREAM}") endif () - #file (READ ${TEST_FOLDER}/${TEST_REFERENCE} TEST_STREAM) - #file (WRITE ${TEST_FOLDER}/${TEST_REFERENCE} "${TEST_STREAM}") - endif () - if (NOT TEST_SORT_COMPARE) - # now compare the output with the reference - execute_process ( - COMMAND ${CMAKE_COMMAND} -E compare_files ${TEST_FOLDER}/${TEST_OUTPUT} ${TEST_FOLDER}/${TEST_REFERENCE} - RESULT_VARIABLE TEST_RESULT - ) - else () - file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} v1) - file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} v2) - list (SORT v1) - list (SORT v2) - if (NOT v1 STREQUAL v2) - set(TEST_RESULT 1) + if (NOT TEST_SORT_COMPARE) + # now compare the output with the reference + execute_process ( + COMMAND ${CMAKE_COMMAND} -E compare_files ${TEST_FOLDER}/${TEST_OUTPUT} ${TEST_FOLDER}/${TEST_REFERENCE} + RESULT_VARIABLE TEST_COMPARE_RESULT + ) + else () + file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} v1) + file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} v2) + list (SORT v1) + list (SORT v2) + if (NOT v1 STREQUAL v2) + set(TEST_COMPARE_RESULT 1) + endif () endif () - endif () - if (TEST_RESULT) - set (TEST_RESULT 0) - file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} test_act) - list (LENGTH test_act len_act) - file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} test_ref) - list (LENGTH test_ref len_ref) - if (len_act GREATER 0 AND len_ref GREATER 0) - math (EXPR _FP_LEN "${len_ref} - 1") - foreach (line RANGE 0 ${_FP_LEN}) - list (GET test_act ${line} str_act) - list (GET test_ref ${line} str_ref) - if (NOT str_act STREQUAL str_ref) - if (str_act) - set (TEST_RESULT 1) - message (STATUS "line = ${line}\n***ACTUAL: ${str_act}\n****REFER: ${str_ref}\n") + if (TEST_COMPARE_RESULT) + set (TEST_COMPARE_RESULT 0) + file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} test_act) + list (LENGTH test_act len_act) + file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} test_ref) + list (LENGTH test_ref len_ref) + if (len_act GREATER 0 AND len_ref GREATER 0) + math (EXPR _FP_LEN "${len_ref} - 1") + foreach (line RANGE 0 ${_FP_LEN}) + list (GET test_act ${line} str_act) + list (GET test_ref ${line} str_ref) + if (NOT str_act STREQUAL str_ref) + if (str_act) + set (TEST_COMPARE_RESULT 1) + message (STATUS "line = ${line}\n***ACTUAL: ${str_act}\n****REFER: ${str_ref}\n") + endif () endif () + endforeach () + else () + if (len_act EQUAL 0) + message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_OUTPUT} is empty") + endif () + if (len_ref EQUAL 0) + message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_REFERENCE} is empty") endif () - endforeach () - else () - if (len_act EQUAL 0) - message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_OUTPUT} is empty") endif () - if (len_ref EQUAL 0) - message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_REFERENCE} is empty") + if (NOT len_act EQUAL len_ref) + set (TEST_COMPARE_RESULT 1) endif () endif () - if (NOT len_act EQUAL len_ref) - set (TEST_RESULT 1) - endif () endif () - message (STATUS "COMPARE Result: ${TEST_RESULT}") + message (STATUS "COMPARE Result: ${TEST_COMPARE_RESULT}") # again, if return value is !=0 scream and shout - if (TEST_RESULT) + if (TEST_COMPARE_RESULT) message (FATAL_ERROR "Failed: The output of ${TEST_OUTPUT} did not match ${TEST_REFERENCE}") endif () endif () endif () else () # else grep the output with the reference + set (TEST_GREP_RESULT 0) file (READ ${TEST_FOLDER}/${TEST_OUTPUT} TEST_STREAM) # TEST_REFERENCE should always be matched string (REGEX MATCH "${TEST_REFERENCE}" TEST_MATCH ${TEST_STREAM}) - string (COMPARE EQUAL "${TEST_REFERENCE}" "${TEST_MATCH}" TEST_RESULT) - if (NOT TEST_RESULT) + string (COMPARE EQUAL "${TEST_REFERENCE}" "${TEST_MATCH}" TEST_GREP_RESULT) + if (NOT TEST_GREP_RESULT) message (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did not contain ${TEST_REFERENCE}") endif () endif () @@ -178,8 +187,8 @@ if (TEST_FILTER) string (REGEX MATCH "${TEST_FILTER}" TEST_MATCH ${TEST_STREAM}) if (TEST_EXPECT) # TEST_EXPECT (1) interprets TEST_FILTER as; NOT to match - string (LENGTH "${TEST_MATCH}" TEST_RESULT) - if (TEST_RESULT) + string (LENGTH "${TEST_MATCH}" TEST_GREP_RESULT) + if (TEST_GREP_RESULT) message (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did contain ${TEST_FILTER}") endif () endif () diff --git a/config/cmake_ext_mod/runTest.cmake b/config/cmake_ext_mod/runTest.cmake index 0c4a5a0..885e4f7 100644 --- a/config/cmake_ext_mod/runTest.cmake +++ b/config/cmake_ext_mod/runTest.cmake @@ -90,18 +90,21 @@ message (STATUS "COMMAND Result: ${TEST_RESULT}") # if the .err file exists and ERRROR_APPEND is enabled if (EXISTS "${TEST_FOLDER}/${TEST_OUTPUT}.err") file (READ ${TEST_FOLDER}/${TEST_OUTPUT}.err TEST_STREAM) - if (TEST_MASK_FILE) - STRING(REGEX REPLACE "CurrentDir is [^\n]+\n" "CurrentDir is (dir name)\n" TEST_STREAM "${TEST_STREAM}") - endif () - # remove special output - string (REGEX REPLACE "^.*_pmi_alps[^\n]+\n" "" TEST_STREAM "${TEST_STREAM}") + list(LENGTH TEST_STREAM test_len) + if (test_len GREATER 0) + if (TEST_MASK_FILE) + STRING(REGEX REPLACE "CurrentDir is [^\n]+\n" "CurrentDir is (dir name)\n" TEST_STREAM "${TEST_STREAM}") + endif () + # remove special output + string (REGEX REPLACE "^.*_pmi_alps[^\n]+\n" "" TEST_STREAM "${TEST_STREAM}") - if (NOT ERROR_APPEND) - # write back to original .err file - file (WRITE ${TEST_FOLDER}/${TEST_OUTPUT}.err "${TEST_STREAM}") - else () - # append error output to the stdout output file - file (APPEND ${TEST_FOLDER}/${TEST_OUTPUT} "${TEST_STREAM}") + if (NOT ERROR_APPEND) + # write back to original .err file + file (WRITE ${TEST_FOLDER}/${TEST_OUTPUT}.err "${TEST_STREAM}") + else () + # append error output to the stdout output file + file (APPEND ${TEST_FOLDER}/${TEST_OUTPUT} "${TEST_STREAM}") + endif () endif () endif () @@ -203,146 +206,159 @@ if (TEST_REF_FILTER) endif () # compare output files to references unless this must be skipped +set (TEST_COMPARE_RESULT 0) if (NOT TEST_SKIP_COMPARE) if (EXISTS "${TEST_FOLDER}/${TEST_REFERENCE}") - if (WIN32 OR MINGW) - configure_file(${TEST_FOLDER}/${TEST_REFERENCE} ${TEST_FOLDER}/${TEST_REFERENCE}.tmp NEWLINE_STYLE CRLF) - if (EXISTS "${TEST_FOLDER}/${TEST_REFERENCE}.tmp") - file(RENAME ${TEST_FOLDER}/${TEST_REFERENCE}.tmp ${TEST_FOLDER}/${TEST_REFERENCE}) + file (READ ${TEST_FOLDER}/${TEST_REFERENCE} TEST_STREAM) + list(LENGTH TEST_STREAM test_len) + if (test_len GREATER 0) + if (WIN32 OR MINGW) + configure_file(${TEST_FOLDER}/${TEST_REFERENCE} ${TEST_FOLDER}/${TEST_REFERENCE}.tmp NEWLINE_STYLE CRLF) + if (EXISTS "${TEST_FOLDER}/${TEST_REFERENCE}.tmp") + file(RENAME ${TEST_FOLDER}/${TEST_REFERENCE}.tmp ${TEST_FOLDER}/${TEST_REFERENCE}) + endif () + #file (READ ${TEST_FOLDER}/${TEST_REFERENCE} TEST_STREAM) + #file (WRITE ${TEST_FOLDER}/${TEST_REFERENCE} "${TEST_STREAM}") endif () - #file (READ ${TEST_FOLDER}/${TEST_REFERENCE} TEST_STREAM) - #file (WRITE ${TEST_FOLDER}/${TEST_REFERENCE} "${TEST_STREAM}") - endif () - if (NOT TEST_SORT_COMPARE) - # now compare the output with the reference - execute_process ( - COMMAND ${CMAKE_COMMAND} -E compare_files ${TEST_FOLDER}/${TEST_OUTPUT} ${TEST_FOLDER}/${TEST_REFERENCE} - RESULT_VARIABLE TEST_RESULT - ) - else () - file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} v1) - file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} v2) - list (SORT v1) - list (SORT v2) - if (NOT v1 STREQUAL v2) - set(TEST_RESULT 1) + if (NOT TEST_SORT_COMPARE) + # now compare the output with the reference + execute_process ( + COMMAND ${CMAKE_COMMAND} -E compare_files ${TEST_FOLDER}/${TEST_OUTPUT} ${TEST_FOLDER}/${TEST_REFERENCE} + RESULT_VARIABLE TEST_COMPARE_RESULT + ) + else () + file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} v1) + file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} v2) + list (SORT v1) + list (SORT v2) + if (NOT v1 STREQUAL v2) + set(TEST_COMPARE_RESULT 1) + endif () endif () - endif () - if (TEST_RESULT) - set (TEST_RESULT 0) - file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} test_act) - list (LENGTH test_act len_act) - file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} test_ref) - list (LENGTH test_ref len_ref) - if (len_act GREATER 0 AND len_ref GREATER 0) - math (EXPR _FP_LEN "${len_ref} - 1") - foreach (line RANGE 0 ${_FP_LEN}) - list (GET test_act ${line} str_act) - list (GET test_ref ${line} str_ref) - if (NOT str_act STREQUAL str_ref) - if (str_act) - set (TEST_RESULT 1) - message (STATUS "line = ${line}\n***ACTUAL: ${str_act}\n****REFER: ${str_ref}\n") + if (TEST_COMPARE_RESULT) + set (TEST_COMPARE_RESULT 0) + file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} test_act) + list (LENGTH test_act len_act) + file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} test_ref) + list (LENGTH test_ref len_ref) + if (len_act GREATER 0 AND len_ref GREATER 0) + math (EXPR _FP_LEN "${len_ref} - 1") + foreach (line RANGE 0 ${_FP_LEN}) + list (GET test_act ${line} str_act) + list (GET test_ref ${line} str_ref) + if (NOT str_act STREQUAL str_ref) + if (str_act) + set (TEST_COMPARE_RESULT 1) + message (STATUS "line = ${line}\n***ACTUAL: ${str_act}\n****REFER: ${str_ref}\n") + endif () endif () + endforeach () + else () + if (len_act EQUAL 0) + message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_OUTPUT} is empty") + endif () + if (len_ref EQUAL 0) + message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_REFERENCE} is empty") endif () - endforeach () - else () - if (len_act EQUAL 0) - message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_OUTPUT} is empty") endif () - if (len_ref EQUAL 0) - message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_REFERENCE} is empty") + if (NOT len_act EQUAL len_ref) + set (TEST_COMPARE_RESULT 1) endif () endif () - if (NOT len_act EQUAL len_ref) - set (TEST_RESULT 1) - endif () endif () - message (STATUS "COMPARE Result: ${TEST_RESULT}") + message (STATUS "COMPARE Result: ${TEST_COMPARE_RESULT}") # again, if return value is !=0 scream and shout - if (TEST_RESULT) + if (TEST_COMPARE_RESULT) message (FATAL_ERROR "Failed: The output of ${TEST_OUTPUT} did not match ${TEST_REFERENCE}") endif () endif () # now compare the .err file with the error reference, if supplied + set (TEST_ERRREF_RESULT 0) if (TEST_ERRREF) - if (WIN32 OR MINGW) - configure_file(${TEST_FOLDER}/${TEST_ERRREF} ${TEST_FOLDER}/${TEST_ERRREF}.tmp NEWLINE_STYLE CRLF) - if (EXISTS "${TEST_FOLDER}/${TEST_ERRREF}.tmp") - file(RENAME ${TEST_FOLDER}/${TEST_ERRREF}.tmp ${TEST_FOLDER}/${TEST_ERRREF}) + file (READ ${TEST_FOLDER}/${TEST_ERRREF} TEST_STREAM) + list(LENGTH TEST_STREAM test_len) + if (test_len GREATER 0) + if (WIN32 OR MINGW) + configure_file(${TEST_FOLDER}/${TEST_ERRREF} ${TEST_FOLDER}/${TEST_ERRREF}.tmp NEWLINE_STYLE CRLF) + if (EXISTS "${TEST_FOLDER}/${TEST_ERRREF}.tmp") + file(RENAME ${TEST_FOLDER}/${TEST_ERRREF}.tmp ${TEST_FOLDER}/${TEST_ERRREF}) + endif () + #file (READ ${TEST_FOLDER}/${TEST_ERRREF} TEST_STREAM) + #file (WRITE ${TEST_FOLDER}/${TEST_ERRREF} "${TEST_STREAM}") endif () - #file (READ ${TEST_FOLDER}/${TEST_ERRREF} TEST_STREAM) - #file (WRITE ${TEST_FOLDER}/${TEST_ERRREF} "${TEST_STREAM}") - endif () - # now compare the error output with the error reference - execute_process ( - COMMAND ${CMAKE_COMMAND} -E compare_files ${TEST_FOLDER}/${TEST_OUTPUT}.err ${TEST_FOLDER}/${TEST_ERRREF} - RESULT_VARIABLE TEST_RESULT - ) - if (TEST_RESULT) - set (TEST_RESULT 0) - file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT}.err test_act) - list (LENGTH test_act len_act) - file (STRINGS ${TEST_FOLDER}/${TEST_ERRREF} test_ref) - list (LENGTH test_ref len_ref) - math (EXPR _FP_LEN "${len_ref} - 1") - if (len_act GREATER 0 AND len_ref GREATER 0) + # now compare the error output with the error reference + execute_process ( + COMMAND ${CMAKE_COMMAND} -E compare_files ${TEST_FOLDER}/${TEST_OUTPUT}.err ${TEST_FOLDER}/${TEST_ERRREF} + RESULT_VARIABLE TEST_ERRREF_RESULT + ) + if (TEST_ERRREF_RESULT) + set (TEST_ERRREF_RESULT 0) + file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT}.err test_act) + list (LENGTH test_act len_act) + file (STRINGS ${TEST_FOLDER}/${TEST_ERRREF} test_ref) + list (LENGTH test_ref len_ref) math (EXPR _FP_LEN "${len_ref} - 1") - foreach (line RANGE 0 ${_FP_LEN}) - list (GET test_act ${line} str_act) - list (GET test_ref ${line} str_ref) - if (NOT str_act STREQUAL str_ref) - if (str_act) - set (TEST_RESULT 1) - message (STATUS "line = ${line}\n***ACTUAL: ${str_act}\n****REFER: ${str_ref}\n") + if (len_act GREATER 0 AND len_ref GREATER 0) + math (EXPR _FP_LEN "${len_ref} - 1") + foreach (line RANGE 0 ${_FP_LEN}) + list (GET test_act ${line} str_act) + list (GET test_ref ${line} str_ref) + if (NOT str_act STREQUAL str_ref) + if (str_act) + set (TEST_ERRREF_RESULT 1) + message (STATUS "line = ${line}\n***ACTUAL: ${str_act}\n****REFER: ${str_ref}\n") + endif () endif () + endforeach () + else () + if (len_act EQUAL 0) + message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_OUTPUT}.err is empty") + endif () + if (len_ref EQUAL 0) + message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_ERRREF} is empty") endif () - endforeach () - else () - if (len_act EQUAL 0) - message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_OUTPUT}.err is empty") endif () - if (len_ref EQUAL 0) - message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_ERRREF} is empty") + if (NOT len_act EQUAL len_ref) + set (TEST_ERRREF_RESULT 1) endif () endif () - if (NOT len_act EQUAL len_ref) - set (TEST_RESULT 1) - endif () endif () - message (STATUS "COMPARE Result: ${TEST_RESULT}") + message (STATUS "COMPARE Result: ${TEST_ERRREF_RESULT}") # again, if return value is !=0 scream and shout - if (TEST_RESULT) + if (TEST_ERRREF_RESULT) message (FATAL_ERROR "Failed: The error output of ${TEST_OUTPUT}.err did not match ${TEST_ERRREF}") endif () endif () endif () +set (TEST_GREP_RESULT 0) if (TEST_GREP_COMPARE) # now grep the output with the reference file (READ ${TEST_FOLDER}/${TEST_OUTPUT} TEST_STREAM) + list(LENGTH TEST_STREAM test_len) + if (test_len GREATER 0) + # TEST_REFERENCE should always be matched + string (REGEX MATCH "${TEST_REFERENCE}" TEST_MATCH ${TEST_STREAM}) + string (COMPARE EQUAL "${TEST_REFERENCE}" "${TEST_MATCH}" TEST_GREP_RESULT) + if (NOT TEST_GREP_RESULT) + message (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did not contain ${TEST_REFERENCE}") + endif () - # TEST_REFERENCE should always be matched - string (REGEX MATCH "${TEST_REFERENCE}" TEST_MATCH ${TEST_STREAM}) - string (COMPARE EQUAL "${TEST_REFERENCE}" "${TEST_MATCH}" TEST_RESULT) - if (NOT TEST_RESULT) - message (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did not contain ${TEST_REFERENCE}") - endif () - - string (REGEX MATCH "${TEST_FILTER}" TEST_MATCH ${TEST_STREAM}) - if (TEST_EXPECT) - # TEST_EXPECT (1) interprets TEST_FILTER as; NOT to match - string (LENGTH "${TEST_MATCH}" TEST_RESULT) - if (TEST_RESULT) - message (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did contain ${TEST_FILTER}") + string (REGEX MATCH "${TEST_FILTER}" TEST_MATCH ${TEST_STREAM}) + if (TEST_EXPECT) + # TEST_EXPECT (1) interprets TEST_FILTER as; NOT to match + string (LENGTH "${TEST_MATCH}" TEST_GREP_RESULT) + if (TEST_GREP_RESULT) + message (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did contain ${TEST_FILTER}") + endif () endif () endif () endif () diff --git a/java/examples/datatypes/H5Ex_T_Float.java b/java/examples/datatypes/H5Ex_T_Float.java index f677479..f15f774 100644 --- a/java/examples/datatypes/H5Ex_T_Float.java +++ b/java/examples/datatypes/H5Ex_T_Float.java @@ -22,6 +22,8 @@ package examples.datatypes; import java.text.DecimalFormat; +import java.text.DecimalFormatSymbols; +import java.util.Locale; import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; @@ -173,7 +175,7 @@ public class H5Ex_T_Float { } // Output the data to the screen. - DecimalFormat df = new DecimalFormat("#,##0.0000"); + DecimalFormat df = new DecimalFormat("#,##0.0000", new DecimalFormatSymbols(Locale.US)); System.out.println(DATASETNAME + ":"); for (int indx = 0; indx < dims[0]; indx++) { System.out.print(" ["); diff --git a/java/examples/datatypes/H5Ex_T_FloatAttribute.java b/java/examples/datatypes/H5Ex_T_FloatAttribute.java index 2e706d9..12831bc 100644 --- a/java/examples/datatypes/H5Ex_T_FloatAttribute.java +++ b/java/examples/datatypes/H5Ex_T_FloatAttribute.java @@ -22,6 +22,8 @@ package examples.datatypes; import java.text.DecimalFormat; +import java.text.DecimalFormatSymbols; +import java.util.Locale; import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; @@ -201,7 +203,7 @@ public class H5Ex_T_FloatAttribute { } // Output the data to the screen. - DecimalFormat df = new DecimalFormat("#,##0.0000"); + DecimalFormat df = new DecimalFormat("#,##0.0000", new DecimalFormatSymbols(Locale.US)); System.out.println(ATTRIBUTENAME + ":"); for (int indx = 0; indx < dims[0]; indx++) { System.out.print(" ["); diff --git a/java/src/jni/h5rImp.c b/java/src/jni/h5rImp.c index 4ad5d5f..21ee658 100644 --- a/java/src/jni/h5rImp.c +++ b/java/src/jni/h5rImp.c @@ -452,7 +452,7 @@ JNIEXPORT jint JNICALL Java_hdf_hdf5lib_H5_H5Rget_1obj_1type3 (JNIEnv *env, jclass clss, jbyteArray ref, jlong rapl_id) { - H5O_type_t object_info; + H5O_type_t object_info = -1; jboolean isCopy; jbyte *refBuf = NULL; int retVal = -1; diff --git a/java/src/jni/h5util.c b/java/src/jni/h5util.c index 5f1bccb..5c82edc 100644 --- a/java/src/jni/h5util.c +++ b/java/src/jni/h5util.c @@ -1059,7 +1059,7 @@ h5str_sprintf } if (H5Tequal(tid, H5T_STD_REF)) { - H5O_type_t obj_type; /* Object type */ + H5O_type_t obj_type = -1; /* Object type */ H5R_type_t ref_type; /* Reference type */ const H5R_ref_t *ref_vp = (H5R_ref_t *)cptr; diff --git a/java/test/junit.sh.in b/java/test/junit.sh.in index ac09db7..598b3d2 100644 --- a/java/test/junit.sh.in +++ b/java/test/junit.sh.in @@ -330,7 +330,7 @@ TESTING JUnit-TestH5 # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5.ext > JUnit-TestH5.out @@ -351,7 +351,7 @@ TESTING JUnit-TestH5Eparams # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Eparams.ext > JUnit-TestH5Eparams.out @@ -372,7 +372,7 @@ TESTING JUnit-TestH5Eregister # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Eregister.ext > JUnit-TestH5Eregister.out @@ -393,7 +393,7 @@ TESTING JUnit-TestH5Fparams # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Fparams.ext > JUnit-TestH5Fparams.out @@ -414,7 +414,7 @@ TESTING JUnit-TestH5Fbasic # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Fbasic.ext > JUnit-TestH5Fbasic.out @@ -435,7 +435,7 @@ TESTING JUnit-TestH5F # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5F.ext > JUnit-TestH5F.out @@ -456,7 +456,7 @@ TESTING JUnit-TestH5Fswmr # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Fswmr.ext > JUnit-TestH5Fswmr.out @@ -477,7 +477,7 @@ TESTING JUnit-TestH5Gbasic # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Gbasic.ext > JUnit-TestH5Gbasic.out @@ -498,7 +498,7 @@ TESTING JUnit-TestH5G # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5G.ext > JUnit-TestH5G.out @@ -519,7 +519,7 @@ TESTING JUnit-TestH5Sbasic # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Sbasic.ext > JUnit-TestH5Sbasic.out @@ -540,7 +540,7 @@ TESTING JUnit-TestH5S # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5S.ext > JUnit-TestH5S.out @@ -561,7 +561,7 @@ TESTING JUnit-TestH5Tparams # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Tparams.ext > JUnit-TestH5Tparams.out @@ -582,7 +582,7 @@ TESTING JUnit-TestH5Tbasic # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Tbasic.ext > JUnit-TestH5Tbasic.out @@ -603,7 +603,7 @@ TESTING JUnit-TestH5T # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5T.ext > JUnit-TestH5T.out @@ -624,7 +624,7 @@ TESTING JUnit-TestH5Dparams # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Dparams.ext > JUnit-TestH5Dparams.out @@ -645,7 +645,7 @@ TESTING JUnit-TestH5D # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5D.ext > JUnit-TestH5D.out @@ -666,7 +666,7 @@ TESTING JUnit-TestH5Dplist # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Dplist.ext > JUnit-TestH5Dplist.out @@ -687,7 +687,7 @@ TESTING JUnit-TestH5Lparams # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Lparams.ext > JUnit-TestH5Lparams.out @@ -708,7 +708,7 @@ TESTING JUnit-TestH5Lbasic # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Lbasic.ext > JUnit-TestH5Lbasic.out @@ -729,7 +729,7 @@ TESTING JUnit-TestH5Lcreate # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Lcreate.ext > JUnit-TestH5Lcreate.out @@ -750,7 +750,7 @@ TESTING JUnit-TestH5R # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5R.ext > JUnit-TestH5R.out @@ -771,7 +771,7 @@ TESTING JUnit-TestH5P # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5P.ext > JUnit-TestH5P.out @@ -792,7 +792,7 @@ TESTING JUnit-TestH5PData # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5PData.ext > JUnit-TestH5PData.out @@ -813,7 +813,7 @@ TESTING JUnit-TestH5Pfapl # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Pfapl.ext > JUnit-TestH5Pfapl.out @@ -834,7 +834,7 @@ TESTING JUnit-TestH5Pvirtual # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Pvirtual.ext > JUnit-TestH5Pvirtual.out @@ -855,7 +855,7 @@ TESTING JUnit-TestH5Plist # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Plist.ext > JUnit-TestH5Plist.out @@ -876,7 +876,7 @@ TESTING JUnit-TestH5A # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5A.ext > JUnit-TestH5A.out @@ -897,7 +897,7 @@ TESTING JUnit-TestH5Oparams # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Oparams.ext > JUnit-TestH5Oparams.out @@ -918,7 +918,7 @@ TESTING JUnit-TestH5Obasic # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Obasic.ext > JUnit-TestH5Obasic.out @@ -939,7 +939,7 @@ TESTING JUnit-TestH5Ocreate # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Ocreate.ext > JUnit-TestH5Ocreate.out @@ -960,7 +960,7 @@ TESTING JUnit-TestH5Ocopy # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Ocopy.ext > JUnit-TestH5Ocopy.out @@ -981,7 +981,7 @@ TESTING JUnit-TestH5PL # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5PL.ext > JUnit-TestH5PL.out @@ -1002,7 +1002,7 @@ TESTING JUnit-TestH5VL # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5VL.ext > JUnit-TestH5VL.out @@ -1023,7 +1023,7 @@ TESTING JUnit-TestH5Z # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Z.ext > JUnit-TestH5Z.out @@ -1044,7 +1044,7 @@ TESTING JUnit-TestH5E # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5E.ext > JUnit-TestH5E.out @@ -1065,7 +1065,7 @@ TESTING JUnit-TestH5Edefault # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Edefault.ext > JUnit-TestH5Edefault.out @@ -1087,7 +1087,7 @@ if test $USE_FILTER_SZIP = "yes"; then # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*[\.[0-9]*]*/Time: XXXX/' \ + -e 's/Time: [0-9]*[\.,[0-9]*]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Giterate.ext > JUnit-TestH5Giterate.out @@ -1109,7 +1109,7 @@ if test "X$ROS3_VFD" = "Xyes"; then # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*\.[0-9]*/Time: XXXX/' \ + -e 's/Time: [0-9]*\.,[0-9]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Pfapls3.ext > JUnit-TestH5Pfapls3.out @@ -1131,7 +1131,7 @@ if test "X$HAVE_LIBHDFS" = "Xyes"; then # Extract file name, line number, version and thread IDs because they may be different sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ -e 's/line [0-9]*/line (number)/' \ - -e 's/Time: [0-9]*\.[0-9]*/Time: XXXX/' \ + -e 's/Time: [0-9]*\.,[0-9]*/Time: XXXX/' \ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ JUnit-TestH5Pfaplhdfs.ext > JUnit-TestH5Pfaplhdfs.out diff --git a/test/dsets.c b/test/dsets.c index 88eb720..b866dfe 100644 --- a/test/dsets.c +++ b/test/dsets.c @@ -7065,6 +7065,7 @@ static void make_random_offset_and_increment(long nelts, long *offsetp, long *incp) { long inc; + long maxinc; HDassert(0 < nelts); @@ -7073,7 +7074,7 @@ make_random_offset_and_increment(long nelts, long *offsetp, long *incp) /* `maxinc` is chosen so that for any `x` in [0, nelts - 1], * `x + maxinc` does not overflow a long. */ - const long maxinc = MIN(nelts - 1, LONG_MAX - nelts); + maxinc = MIN(nelts - 1, LONG_MAX - nelts); /* Choose a random number in [1, nelts - 1]. If its greatest divisor * in common with `nelts` is 1, then it will "generate" the additive ring @@ -13135,7 +13136,7 @@ test_versionbounds(void) return FAIL; } /* end test_versionbounds() */ - + /*----------------------------------------------------------------------------- * Function: test_object_header_minimization_dcpl * diff --git a/tools/lib/CMakeLists.txt b/tools/lib/CMakeLists.txt index f46eb23..2acfab0 100644 --- a/tools/lib/CMakeLists.txt +++ b/tools/lib/CMakeLists.txt @@ -39,6 +39,7 @@ if (NOT ONLY_SHARED_LIBS) INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>" ) #target_compile_definitions(${HDF5_TOOLS_LIB_TARGET} PRIVATE H5_TOOLS_DEBUG) + #target_compile_definitions(${HDF5_TOOLS_LIB_TARGET} PRIVATE H5DIFF_DEBUG) TARGET_C_PROPERTIES (${HDF5_TOOLS_LIB_TARGET} STATIC) target_link_libraries (${HDF5_TOOLS_LIB_TARGET} PUBLIC ${HDF5_LIB_TARGET} @@ -59,6 +60,7 @@ if (BUILD_SHARED_LIBS) target_compile_definitions(${HDF5_TOOLS_LIBSH_TARGET} PUBLIC "H5_BUILT_AS_DYNAMIC_LIB" #PRIVATE H5_TOOLS_DEBUG + #PRIVATE H5DIFF_DEBUG ) TARGET_C_PROPERTIES (${HDF5_TOOLS_LIBSH_TARGET} SHARED) target_link_libraries (${HDF5_TOOLS_LIBSH_TARGET} diff --git a/tools/lib/h5diff.c b/tools/lib/h5diff.c index b22af18..d7fc991 100644 --- a/tools/lib/h5diff.c +++ b/tools/lib/h5diff.c @@ -143,20 +143,19 @@ is_valid_options(diff_opt_t *opts) * no -q(quiet) with -v (verbose) or -r (report) */ if(opts->m_quiet && (opts->m_verbose || opts->m_report)) { parallel_print("Error: -q (quiet mode) cannot be added to verbose or report modes\n"); - opts->err_stat = 1; - HGOTO_DONE(0); + opts->err_stat = H5DIFF_ERR; + H5TOOLS_GOTO_DONE(0); } /* ------------------------------------------------------- * only allow --no-dangling-links along with --follow-symlinks */ if(opts->no_dangle_links && !opts->follow_links) { parallel_print("Error: --no-dangling-links must be used along with --follow-symlinks option.\n"); - opts->err_stat = 1; - HGOTO_DONE(0); + opts->err_stat = H5DIFF_ERR; + H5TOOLS_GOTO_DONE(0); } done: - return ret_value; } @@ -178,7 +177,7 @@ is_exclude_path (char * path, h5trav_type_t type, diff_opt_t *opts) /* check if exclude path option is given */ if (!opts->exclude_path) - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(0); /* assign to local exclude list pointer */ exclude_path_ptr = opts->exclude; @@ -274,15 +273,15 @@ build_match_list (const char *objname1, trav_info_t *info1, const char *objname2 int cmp; trav_table_t *table = NULL; size_t idx; - int ret_value = 0; - h5difftrace("build_match_list start\n"); + H5TOOLS_DEBUG("build_match_list start - errstat:%d", opts->err_stat); /* init */ trav_table_init(&table); if (table == NULL) { - H5TOOLS_INFO(H5E_tools_min_info_id_g, "Cannot create traverse table"); - HGOTO_DONE(-1); + H5TOOLS_INFO("Cannot create traverse table"); + H5TOOLS_GOTO_DONE_NO_RET(); } + /* * This is necessary for the case that given objects are group and * have different names (ex: obj1 is /grp1 and obj2 is /grp5). @@ -372,7 +371,8 @@ build_match_list (const char *objname1, trav_info_t *info1, const char *objname2 done: *table_out = table; - h5difftrace("build_match_list finish\n"); + + H5TOOLS_ENDDEBUG("exit"); } @@ -399,80 +399,80 @@ trav_grp_objs(const char *path, const H5O_info_t *oinfo, static herr_t trav_grp_symlinks(const char *path, const H5L_info_t *linfo, void *udata) { - herr_t ret_value = 0; trav_info_t *tinfo = (trav_info_t *)udata; diff_opt_t *opts = (diff_opt_t *)tinfo->opts; h5tool_link_info_t lnk_info; const char *ext_fname; const char *ext_path; + herr_t ret_value = SUCCEED; /* init linkinfo struct */ HDmemset(&lnk_info, 0, sizeof(h5tool_link_info_t)); if (!opts->follow_links) { trav_info_visit_lnk(path, linfo, tinfo); - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(SUCCEED); } switch(linfo->type) { case H5L_TYPE_SOFT: if((ret_value = H5tools_get_symlink_info(tinfo->fid, path, &lnk_info, opts->follow_links)) < 0) { - HGOTO_DONE(FAIL); + H5TOOLS_GOTO_DONE(FAIL); } else if (ret_value == 0) { - /* no dangling link option given and detect dangling link */ - tinfo->symlink_visited.dangle_link = TRUE; + /* no dangling link option given and detect dangling link */ + tinfo->symlink_visited.dangle_link = TRUE; trav_info_visit_lnk(path, linfo, tinfo); if (opts->no_dangle_links) - opts->err_stat = 1; /* make dangling link is error */ - HGOTO_DONE(0); + opts->err_stat = H5DIFF_ERR; /* make dangling link is error */ + H5TOOLS_GOTO_DONE(SUCCEED); } /* check if already visit the target object */ if(symlink_is_visited( &(tinfo->symlink_visited), linfo->type, NULL, lnk_info.trg_path)) - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(SUCCEED); /* add this link as visited link */ if(symlink_visit_add( &(tinfo->symlink_visited), linfo->type, NULL, lnk_info.trg_path) < 0) - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(SUCCEED); if(h5trav_visit(tinfo->fid, path, TRUE, TRUE, trav_grp_objs,trav_grp_symlinks, tinfo, H5O_INFO_BASIC) < 0) { parallel_print("Error: Could not get file contents\n"); - opts->err_stat = 1; - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "Error: Could not get file contents"); + opts->err_stat = H5DIFF_ERR; + H5TOOLS_GOTO_ERROR(FAIL, "Error: Could not get file contents"); } break; case H5L_TYPE_EXTERNAL: if ((ret_value = H5tools_get_symlink_info(tinfo->fid, path, &lnk_info, opts->follow_links)) < 0) { - HGOTO_DONE(FAIL); + H5TOOLS_GOTO_DONE(FAIL); } else if (ret_value == 0) { /* no dangling link option given and detect dangling link */ tinfo->symlink_visited.dangle_link = TRUE; trav_info_visit_lnk(path, linfo, tinfo); if (opts->no_dangle_links) - opts->err_stat = 1; /* make dangling link is error */ - HGOTO_DONE(0); + opts->err_stat = H5DIFF_ERR; /* make dangling link is error */ + H5TOOLS_GOTO_DONE(SUCCEED); } if(H5Lunpack_elink_val(lnk_info.trg_path, linfo->u.val_size, NULL, &ext_fname, &ext_path) < 0) - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(SUCCEED); /* check if already visit the target object */ if(symlink_is_visited( &(tinfo->symlink_visited), linfo->type, ext_fname, ext_path)) - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(SUCCEED); /* add this link as visited link */ if(symlink_visit_add( &(tinfo->symlink_visited), linfo->type, ext_fname, ext_path) < 0) - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(SUCCEED); if(h5trav_visit(tinfo->fid, path, TRUE, TRUE, trav_grp_objs,trav_grp_symlinks, tinfo, H5O_INFO_BASIC) < 0) { parallel_print("Error: Could not get file contents\n"); - opts->err_stat = 1; - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "Error: Could not get file contents\n"); + opts->err_stat = H5DIFF_ERR; + H5TOOLS_GOTO_ERROR(FAIL, "Error: Could not get file contents\n"); } break; @@ -481,14 +481,15 @@ trav_grp_symlinks(const char *path, const H5L_info_t *linfo, void *udata) case H5L_TYPE_ERROR: default: parallel_print("Error: Invalid link type\n"); - opts->err_stat = 1; - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "Error: Invalid link type"); + opts->err_stat = H5DIFF_ERR; + H5TOOLS_GOTO_ERROR(FAIL, "Error: Invalid link type"); break; } /* end of switch */ done: if (lnk_info.trg_path) HDfree(lnk_info.trg_path); + H5TOOLS_ENDDEBUG("exit"); return ret_value; } @@ -509,9 +510,8 @@ h5diff(const char *fname1, const char *objname2, diff_opt_t *opts) { - int ret_value = 0; - hid_t file1_id = -1; - hid_t file2_id = -1; + hid_t file1_id = H5I_INVALID_HID; + hid_t file2_id = H5I_INVALID_HID; char filenames[2][MAX_FILENAME]; hsize_t nfound = 0; int l_ret1 = -1; @@ -540,8 +540,9 @@ h5diff(const char *fname1, h5tool_link_info_t trg_linfo2; /* list for common objects */ trav_table_t *match_list = NULL; + diff_err_t ret_value = H5DIFF_NO_ERR; - h5difftrace("h5diff start\n"); + H5TOOLS_DEBUG("h5diff start"); /* init filenames */ HDmemset(filenames, 0, MAX_FILENAME * 2); /* init link info struct */ @@ -552,10 +553,10 @@ h5diff(const char *fname1, * check invalid combination of options *-----------------------------------------------------------------------*/ if(!is_valid_options(opts)) - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(0); opts->cmn_objs = 1; /* eliminate warning */ - opts->err_stat = 0; /* initialize error status */ + opts->err_stat = H5DIFF_NO_ERR; /* initialize error status */ /*------------------------------------------------------------------------- * open the files first; if they are not valid, no point in continuing @@ -564,15 +565,16 @@ h5diff(const char *fname1, /* open file 1 */ if((file1_id = h5tools_fopen(fname1, H5F_ACC_RDONLY, H5P_DEFAULT, NULL, NULL, (size_t)0)) < 0) { parallel_print("h5diff: <%s>: unable to open file\n", fname1); - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "<%s>: unable to open file\n", fname1); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "<%s>: unable to open file\n", fname1); } /* end if */ - + H5TOOLS_DEBUG("file1_id = %s", fname1); /* open file 2 */ if((file2_id = h5tools_fopen(fname2, H5F_ACC_RDONLY, H5P_DEFAULT, NULL, NULL, (size_t)0)) < 0) { parallel_print("h5diff: <%s>: unable to open file\n", fname2); - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "<%s>: unable to open file\n", fname2); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "<%s>: unable to open file\n", fname2); } /* end if */ + H5TOOLS_DEBUG("file2_id = %s", fname2); /*------------------------------------------------------------------------- * Initialize the info structs @@ -581,7 +583,7 @@ h5diff(const char *fname1, trav_info_init(fname1, file1_id, &info1_obj); trav_info_init(fname2, file2_id, &info2_obj); - h5difftrace("trav_info_init initialized\n"); + H5TOOLS_DEBUG("trav_info_init initialized"); /* if any object is specified */ if (objname1) { /* make the given object1 fullpath, start with "/" */ @@ -589,11 +591,11 @@ h5diff(const char *fname1, #ifdef H5_HAVE_ASPRINTF /* Use the asprintf() routine, since it does what we're trying to do below */ if(HDasprintf(&obj1fullname, "/%s", objname1) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "name buffer allocation failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "name buffer allocation failed"); #else /* H5_HAVE_ASPRINTF */ /* (malloc 2 more for "/" and end-of-line) */ if ((obj1fullname = (char*)HDmalloc(HDstrlen(objname1) + 2)) == NULL) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "name buffer allocation failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "name buffer allocation failed"); HDstrcpy(obj1fullname, "/"); HDstrcat(obj1fullname, objname1); @@ -607,11 +609,11 @@ h5diff(const char *fname1, #ifdef H5_HAVE_ASPRINTF /* Use the asprintf() routine, since it does what we're trying to do below */ if(HDasprintf(&obj2fullname, "/%s", objname2) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "name buffer allocation failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "name buffer allocation failed"); #else /* H5_HAVE_ASPRINTF */ /* (malloc 2 more for "/" and end-of-line) */ if ((obj2fullname = (char*)HDmalloc(HDstrlen(objname2) + 2)) == NULL) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "name buffer allocation failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "name buffer allocation failed"); HDstrcpy(obj2fullname, "/"); HDstrcat(obj2fullname, objname2); #endif /* H5_HAVE_ASPRINTF */ @@ -622,7 +624,7 @@ h5diff(const char *fname1, /*---------------------------------------------------------- * check if obj1 is root, group, single object or symlink */ - h5difftrace("h5diff check if obj1 is root, group, single object or symlink\n"); + H5TOOLS_DEBUG("h5diff check if obj1=%s is root, group, single object or symlink", obj1fullname); if(!HDstrcmp(obj1fullname, "/")) { obj1type = H5TRAV_TYPE_GROUP; } @@ -630,12 +632,12 @@ h5diff(const char *fname1, /* check if link itself exist */ if(H5Lexists(file1_id, obj1fullname, H5P_DEFAULT) <= 0) { parallel_print ("Object <%s> could not be found in <%s>\n", obj1fullname, fname1); - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "Error: Object could not be found"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Error: Object could not be found"); } /* get info from link */ if(H5Lget_info(file1_id, obj1fullname, &src_linfo1, H5P_DEFAULT) < 0) { parallel_print("Unable to get link info from <%s>\n", obj1fullname); - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Lget_info failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Lget_info failed"); } info1_lp = info1_obj; @@ -651,7 +653,7 @@ h5diff(const char *fname1, if(H5Oget_info_by_name2(file1_id, obj1fullname, &oinfo1, H5O_INFO_BASIC, H5P_DEFAULT) < 0) { parallel_print("Error: Could not get file contents\n"); - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "Error: Could not get file contents"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Error: Could not get file contents"); } obj1type = (h5trav_type_t)oinfo1.type; trav_info_add(info1_obj, obj1fullname, obj1type); @@ -672,7 +674,7 @@ h5diff(const char *fname1, /*---------------------------------------------------------- * check if obj2 is root, group, single object or symlink */ - h5difftrace("h5diff check if obj2 is root, group, single object or symlink\n"); + H5TOOLS_DEBUG("h5diff check if obj2=%s is root, group, single object or symlink", obj2fullname); if(!HDstrcmp(obj2fullname, "/")) { obj2type = H5TRAV_TYPE_GROUP; } @@ -680,12 +682,12 @@ h5diff(const char *fname1, /* check if link itself exist */ if(H5Lexists(file2_id, obj2fullname, H5P_DEFAULT) <= 0) { parallel_print ("Object <%s> could not be found in <%s>\n", obj2fullname, fname2); - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "Error: Object could not be found"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Error: Object could not be found"); } /* get info from link */ if(H5Lget_info(file2_id, obj2fullname, &src_linfo2, H5P_DEFAULT) < 0) { parallel_print("Unable to get link info from <%s>\n", obj2fullname); - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Lget_info failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Lget_info failed"); } info2_lp = info2_obj; @@ -701,7 +703,7 @@ h5diff(const char *fname1, if(H5Oget_info_by_name2(file2_id, obj2fullname, &oinfo2, H5O_INFO_BASIC, H5P_DEFAULT) < 0) { parallel_print("Error: Could not get file contents\n"); - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "Error: Could not get file contents"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Error: Could not get file contents"); } obj2type = (h5trav_type_t)oinfo2.type; trav_info_add(info2_obj, obj2fullname, obj2type); @@ -721,7 +723,7 @@ h5diff(const char *fname1, } /* if no object specified */ else { - h5difftrace("h5diff no object specified\n"); + H5TOOLS_DEBUG("h5diff no object specified"); /* set root group */ obj1fullname = (char*)HDstrdup("/"); obj1type = H5TRAV_TYPE_GROUP; @@ -729,7 +731,7 @@ h5diff(const char *fname1, obj2type = H5TRAV_TYPE_GROUP; } - h5diffdebug2("get any symbolic links info - errstat:%d\n", opts->err_stat); + H5TOOLS_DEBUG("get any symbolic links info - errstat:%d", opts->err_stat); /* get any symbolic links info */ l_ret1 = H5tools_get_symlink_info(file1_id, obj1fullname, &trg_linfo1, opts->follow_links); l_ret2 = H5tools_get_symlink_info(file2_id, obj2fullname, &trg_linfo2, opts->follow_links); @@ -745,15 +747,15 @@ h5diff(const char *fname1, /*------------------------------- * check symbolic link (object1) */ - h5difftrace("h5diff check symbolic link (object1)\n"); + H5TOOLS_DEBUG("h5diff check symbolic link (object1)"); /* dangling link */ if (l_ret1 == 0) { - h5difftrace("h5diff ... dangling link\n"); + H5TOOLS_DEBUG("h5diff ... dangling link"); if (opts->no_dangle_links) { /* treat dangling link as error */ if(opts->m_verbose) parallel_print("Warning: <%s> is a dangling link.\n", obj1fullname); - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "treat dangling link as error"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "treat dangling link as error"); } else { if(opts->m_verbose) @@ -761,40 +763,40 @@ h5diff(const char *fname1, if (l_ret1 != 0 || l_ret2 != 0) { nfound++; print_found(nfound); - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(H5DIFF_NO_ERR); } } } else if(l_ret1 < 0) { /* fail */ parallel_print ("Object <%s> could not be found in <%s>\n", obj1fullname, fname1); - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "Object could not be found"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Object could not be found"); } else if(l_ret1 != 2) { /* symbolic link */ obj1type = (h5trav_type_t)trg_linfo1.trg_type; - h5difftrace("h5diff ... ... trg_linfo1.trg_type == H5L_TYPE_HARD\n"); + H5TOOLS_DEBUG("h5diff ... ... trg_linfo1.trg_type == H5L_TYPE_HARD"); if (info1_lp != NULL) { size_t idx = info1_lp->nused - 1; - h5difftrace("h5diff ... ... ... info1_obj not null\n"); + H5TOOLS_DEBUG("h5diff ... ... ... info1_obj not null"); info1_lp->paths[idx].type = (h5trav_type_t)trg_linfo1.trg_type; info1_lp->paths[idx].objno = trg_linfo1.objno; info1_lp->paths[idx].fileno = trg_linfo1.fileno; } - h5difftrace("h5diff check symbolic link (object1) finished\n"); + H5TOOLS_DEBUG("h5diff check symbolic link (object1) finished"); } /*------------------------------- * check symbolic link (object2) */ - h5difftrace("h5diff check symbolic link (object2)\n"); + H5TOOLS_DEBUG("h5diff check symbolic link (object2)"); /* dangling link */ if (l_ret2 == 0) { - h5difftrace("h5diff ... dangling link\n"); + H5TOOLS_DEBUG("h5diff ... dangling link"); if (opts->no_dangle_links) { /* treat dangling link as error */ if(opts->m_verbose) parallel_print("Warning: <%s> is a dangling link.\n", obj2fullname); - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "treat dangling link as error"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "treat dangling link as error"); } else { if(opts->m_verbose) @@ -802,25 +804,25 @@ h5diff(const char *fname1, if (l_ret1 != 0 || l_ret2 != 0) { nfound++; print_found(nfound); - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(H5DIFF_NO_ERR); } } } else if(l_ret2 < 0) { /* fail */ parallel_print ("Object <%s> could not be found in <%s>\n", obj2fullname, fname2); - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "Object could not be found"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Object could not be found"); } else if(l_ret2 != 2) { /* symbolic link */ obj2type = (h5trav_type_t)trg_linfo2.trg_type; if (info2_lp != NULL) { size_t idx = info2_lp->nused - 1; - h5difftrace("h5diff ... ... ... info2_obj not null\n"); + H5TOOLS_DEBUG("h5diff ... ... ... info2_obj not null"); info2_lp->paths[idx].type = (h5trav_type_t)trg_linfo2.trg_type; info2_lp->paths[idx].objno = trg_linfo2.objno; info2_lp->paths[idx].fileno = trg_linfo2.fileno; } - h5difftrace("h5diff check symbolic link (object1) finished\n"); + H5TOOLS_DEBUG("h5diff check symbolic link (object1) finished"); } } /* end of if follow symlinks */ @@ -832,16 +834,16 @@ h5diff(const char *fname1, */ if(!(opts->m_verbose || opts->m_report)) { - h5difftrace("h5diff NOT (opts->m_verbose || opts->m_report)\n"); + H5TOOLS_DEBUG("h5diff NOT (opts->m_verbose || opts->m_report)"); /* if no danglink links */ if (l_ret1 > 0 && l_ret2 > 0) if (h5tools_is_obj_same(file1_id, obj1fullname, file2_id, obj2fullname) != 0) - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(H5DIFF_NO_ERR); } both_objs_grp = (obj1type == H5TRAV_TYPE_GROUP && obj2type == H5TRAV_TYPE_GROUP); if (both_objs_grp) { - h5difftrace("h5diff both_objs_grp TRUE\n"); + H5TOOLS_DEBUG("h5diff both_objs_grp TRUE"); /* * traverse group1 */ @@ -852,7 +854,7 @@ h5diff(const char *fname1, if(h5trav_visit(file1_id, obj1fullname, TRUE, TRUE, trav_grp_objs, trav_grp_symlinks, info1_grp, H5O_INFO_BASIC) < 0) { parallel_print("Error: Could not get file contents\n"); - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "Could not get file contents"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Could not get file contents"); } info1_lp = info1_grp; @@ -866,11 +868,11 @@ h5diff(const char *fname1, if(h5trav_visit(file2_id, obj2fullname, TRUE, TRUE, trav_grp_objs, trav_grp_symlinks, info2_grp, H5O_INFO_BASIC) < 0) { parallel_print("Error: Could not get file contents\n"); - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "Could not get file contents"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Could not get file contents"); } /* end if */ info2_lp = info2_grp; } - h5diffdebug2("groups traversed - errstat:%d\n", opts->err_stat); + H5TOOLS_DEBUG("groups traversed - errstat:%d", opts->err_stat); #ifdef H5_HAVE_PARALLEL if(g_Parallel) { @@ -890,8 +892,10 @@ h5diff(const char *fname1, } /* end if */ #endif + H5TOOLS_DEBUG("build_match_list next - errstat:%d", opts->err_stat); /* process the objects */ build_match_list (obj1fullname, info1_lp, obj2fullname, info2_lp, &match_list, opts); + H5TOOLS_DEBUG("build_match_list finished - errstat:%d", opts->err_stat); if (both_objs_grp) { /*------------------------------------------------------ * print the list @@ -907,7 +911,7 @@ h5diff(const char *fname1, parallel_print("file1 file2\n"); parallel_print("---------------------------------------\n"); for(u = 0; u < match_list->nobjs; u++) { - char c1, c2; + int c1, c2; c1 = (match_list->objs[u].flags[0]) ? 'x' : ' '; c2 = (match_list->objs[u].flags[1]) ? 'x' : ' '; parallel_print("%5c %6c %-15s\n", c1, c2, match_list->objs[u].name); @@ -915,6 +919,7 @@ h5diff(const char *fname1, parallel_print ("\n"); } /* end if */ } + H5TOOLS_DEBUG("diff_match next - errstat:%d", opts->err_stat); nfound = diff_match(file1_id, obj1fullname, info1_lp, file2_id, obj2fullname, info2_lp, match_list, opts); @@ -957,8 +962,9 @@ done: H5Fclose(file2_id); } H5E_END_TRY; - h5difftrace("h5diff finish\n"); + H5TOOLS_DEBUG("h5diff finish - errstat:%d", opts->err_stat); + H5TOOLS_ENDDEBUG("exit"); return nfound; } @@ -987,7 +993,6 @@ diff_match(hid_t file1_id, const char *grp1, trav_info_t *info1, { hsize_t nfound = 0; unsigned i; - int ret_value = opts->err_stat; const char *grp1_path = ""; const char *grp2_path = ""; char *obj1_fullpath = NULL; @@ -995,8 +1000,9 @@ diff_match(hid_t file1_id, const char *grp1, trav_info_t *info1, diff_args_t argdata; size_t idx1 = 0; size_t idx2 = 0; + diff_err_t ret_value = opts->err_stat; - h5difftrace("diff_match start\n"); + H5TOOLS_DEBUG("diff_match start - errstat:%d", opts->err_stat); /* * if not root, prepare object name to be pre-appended to group path to * make full path @@ -1049,41 +1055,41 @@ diff_match(hid_t file1_id, const char *grp1, trav_info_t *info1, #endif for(i = 0; i < table->nobjs; i++) { - h5diffdebug3("diff for common objects[%d] - errstat:%d\n", i, opts->err_stat); + H5TOOLS_DEBUG("diff for common objects[%d] - errstat:%d", i, opts->err_stat); if(table->objs[i].flags[0] && table->objs[i].flags[1]) { /* make full path for obj1 */ #ifdef H5_HAVE_ASPRINTF /* Use the asprintf() routine, since it does what we're trying to do below */ if(HDasprintf(&obj1_fullpath, "%s%s", grp1_path, table->objs[i].name) < 0) { - H5TOOLS_ERROR(1, H5E_tools_min_id_g, "name buffer allocation failed"); + H5TOOLS_ERROR(H5DIFF_ERR, "name buffer allocation failed"); } #else /* H5_HAVE_ASPRINTF */ if((obj1_fullpath = (char*)HDmalloc(HDstrlen(grp1_path) + HDstrlen(table->objs[i].name) + 1)) == NULL) { - H5TOOLS_ERROR(1, H5E_tools_min_id_g, "name buffer allocation failed"); + H5TOOLS_ERROR(H5DIFF_ERR, "name buffer allocation failed"); } else { HDstrcpy(obj1_fullpath, grp1_path); HDstrcat(obj1_fullpath, table->objs[i].name); } #endif /* H5_HAVE_ASPRINTF */ - h5diffdebug2("diff_match path1 - %s\n", obj1_fullpath); + H5TOOLS_DEBUG("diff_match path1 - %s", obj1_fullpath); /* make full path for obj2 */ #ifdef H5_HAVE_ASPRINTF /* Use the asprintf() routine, since it does what we're trying to do below */ if(HDasprintf(&obj2_fullpath, "%s%s", grp2_path, table->objs[i].name) < 0) { - H5TOOLS_ERROR(1, H5E_tools_min_id_g, "name buffer allocation failed"); + H5TOOLS_ERROR(H5DIFF_ERR, "name buffer allocation failed"); } #else /* H5_HAVE_ASPRINTF */ if((obj2_fullpath = (char*)HDmalloc(HDstrlen(grp2_path) + HDstrlen(table->objs[i].name) + 1)) == NULL) { - H5TOOLS_ERROR(1, H5E_tools_min_id_g, "name buffer allocation failed"); + H5TOOLS_ERROR(H5DIFF_ERR, "name buffer allocation failed"); } else { HDstrcpy(obj2_fullpath, grp2_path); HDstrcat(obj2_fullpath, table->objs[i].name); } #endif /* H5_HAVE_ASPRINTF */ - h5diffdebug2("diff_match path2 - %s\n", obj2_fullpath); + H5TOOLS_DEBUG("diff_match path2 - %s", obj2_fullpath); /* get index to figure out type of the object in file1 */ while(info1->paths[idx1].path && (HDstrcmp(obj1_fullpath, info1->paths[idx1].path) != 0)) @@ -1099,6 +1105,7 @@ diff_match(hid_t file1_id, const char *grp1, trav_info_t *info1, opts->cmn_objs = 1; if(!g_Parallel) { + H5TOOLS_DEBUG("diff paths - errstat:%d", opts->err_stat); nfound += diff(file1_id, obj1_fullpath, file2_id, obj2_fullpath, opts, &argdata); @@ -1107,7 +1114,7 @@ diff_match(hid_t file1_id, const char *grp1, trav_info_t *info1, else { int workerFound = 0; - h5difftrace("Beginning of big else block\n"); + H5TOOLS_DEBUG("Beginning of big else block"); /* We're in parallel mode */ /* Since the data type of diff value is hsize_t which can * be arbitary large such that there is no MPI type that @@ -1261,7 +1268,7 @@ diff_match(hid_t file1_id, const char *grp1, trav_info_t *info1, HDfree(obj2_fullpath); } /* end if */ } /* end for */ - h5diffdebug2("done with for loop - errstat:%d\n", opts->err_stat); + H5TOOLS_DEBUG("done with for loop - errstat:%d", opts->err_stat); #ifdef H5_HAVE_PARALLEL if(g_Parallel) { @@ -1338,7 +1345,7 @@ diff_match(hid_t file1_id, const char *grp1, trav_info_t *info1, /* Print any final data waiting in our queue */ print_incoming_data(); } /* end if */ - h5difftrace("done with if block\n"); + H5TOOLS_DEBUG("done with if block"); HDfree(workerTasks); } @@ -1346,11 +1353,13 @@ diff_match(hid_t file1_id, const char *grp1, trav_info_t *info1, opts->err_stat = opts->err_stat | ret_value; -/* free table */ + /* free table */ if (table) trav_table_free(table); - h5diffdebug2("diff_match finish:%d\n", nfound); + H5TOOLS_DEBUG("diff_match finish diffs=%d - errstat:%d", nfound, opts->err_stat); + + H5TOOLS_ENDDEBUG("exit"); return nfound; } @@ -1376,25 +1385,25 @@ diff(hid_t file1_id, diff_opt_t * opts, diff_args_t *argdata) { - int ret_value = opts->err_stat; int status = -1; - hid_t dset1_id = -1; - hid_t dset2_id = -1; - hid_t type1_id = -1; - hid_t type2_id = -1; - hid_t grp1_id = -1; - hid_t grp2_id = -1; + hid_t dset1_id = H5I_INVALID_HID; + hid_t dset2_id = H5I_INVALID_HID; + hid_t type1_id = H5I_INVALID_HID; + hid_t type2_id = H5I_INVALID_HID; + hid_t grp1_id = H5I_INVALID_HID; + hid_t grp2_id = H5I_INVALID_HID; hbool_t is_dangle_link1 = FALSE; hbool_t is_dangle_link2 = FALSE; hbool_t is_hard_link = FALSE; hsize_t nfound = 0; h5trav_type_t object_type; + diff_err_t ret_value = opts->err_stat; /* to get link info */ h5tool_link_info_t linkinfo1; h5tool_link_info_t linkinfo2; - h5difftrace("diff start\n"); + H5TOOLS_DEBUG("diff start - errstat:%d", opts->err_stat); /*init link info struct */ HDmemset(&linkinfo1, 0, sizeof(h5tool_link_info_t)); @@ -1414,9 +1423,10 @@ diff(hid_t file1_id, * check dangling links for path1 and path2 */ + H5TOOLS_DEBUG("diff links"); /* target object1 - get type and name */ if ((status = H5tools_get_symlink_info(file1_id, path1, &linkinfo1, opts->follow_links)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5tools_get_symlink_info failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5tools_get_symlink_info failed"); /* dangling link */ if (status == 0) { @@ -1424,7 +1434,7 @@ diff(hid_t file1_id, /* dangling link is error */ if(opts->m_verbose) parallel_print("Warning: <%s> is a dangling link.\n", path1); - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "dangling link is error"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "dangling link is error"); } else is_dangle_link1 = TRUE; @@ -1432,14 +1442,14 @@ diff(hid_t file1_id, /* target object2 - get type and name */ if ((status = H5tools_get_symlink_info(file2_id, path2, &linkinfo2, opts->follow_links)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5tools_get_symlink_info failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5tools_get_symlink_info failed"); /* dangling link */ if (status == 0) { if (opts->no_dangle_links) { /* dangling link is error */ if(opts->m_verbose) parallel_print("Warning: <%s> is a dangling link.\n", path2); - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "dangling link is error"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "dangling link is error"); } else is_dangle_link2 = TRUE; @@ -1447,7 +1457,7 @@ diff(hid_t file1_id, /* found dangling link */ if (is_dangle_link1 || is_dangle_link2) { - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(H5DIFF_NO_ERR); } /* follow symbolic link option */ @@ -1462,6 +1472,7 @@ diff(hid_t file1_id, } /* if objects are not the same type */ if (argdata->type[0] != argdata->type[1]) { + H5TOOLS_DEBUG("diff objects are not the same"); if (opts->m_verbose||opts->m_list_not_cmp) { parallel_print("Not comparable: <%s> is of type %s and <%s> is of type %s\n", path1, get_type(argdata->type[0]), @@ -1471,7 +1482,7 @@ diff(hid_t file1_id, /* TODO: will need to update non-comparable is different * opts->contents = 0; */ - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(H5DIFF_NO_ERR); } else /* now both object types are same */ object_type = argdata->type[0]; @@ -1485,7 +1496,7 @@ diff(hid_t file1_id, * Perform this to match the outputs as bypassing. */ if (argdata->is_same_trgobj) { - h5difftrace("argdata->is_same_trgobj\n"); + H5TOOLS_DEBUG("argdata->is_same_trgobj"); is_hard_link = (object_type == H5TRAV_TYPE_DATASET || object_type == H5TRAV_TYPE_NAMED_DATATYPE || object_type == H5TRAV_TYPE_GROUP); @@ -1523,7 +1534,7 @@ diff(hid_t file1_id, } /* if(opts->m_verbose || opts->m_report) */ /* exact same, so comparison is done */ - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(H5DIFF_NO_ERR); } } @@ -1533,13 +1544,15 @@ diff(hid_t file1_id, *---------------------------------------------------------------------- */ case H5TRAV_TYPE_DATASET: + H5TOOLS_DEBUG("diff object type H5TRAV_TYPE_DATASET - errstat:%d", opts->err_stat); if((dset1_id = H5Dopen2(file1_id, path1, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Dopen2 failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dopen2 failed"); if((dset2_id = H5Dopen2(file2_id, path2, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Dopen2 failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dopen2 failed"); /* verbose (-v) and report (-r) mode */ if(opts->m_verbose || opts->m_report) { do_print_objname("dataset", path1, path2, opts); + H5TOOLS_DEBUG("call diff_dataset 1:%s 2:%s ", path1, path2); nfound = diff_dataset(file1_id, file2_id, path1, path2, opts); print_found(nfound); } @@ -1556,7 +1569,7 @@ diff(hid_t file1_id, print_found(nfound); } } - h5diffdebug2("diff after dataset:%d\n", nfound); + H5TOOLS_DEBUG("diff after dataset:%d - errstat:%d", nfound, opts->err_stat); /*--------------------------------------------------------- * compare attributes @@ -1564,14 +1577,15 @@ diff(hid_t file1_id, * referenced object *--------------------------------------------------------- */ - if(path1) + if(path1) { + H5TOOLS_DEBUG( "call diff_attr 1:%s 2:%s ", path1, path2); nfound += diff_attr(dset1_id, dset2_id, path1, path2, opts); - + } if(H5Dclose(dset1_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Dclose failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dclose failed"); if(H5Dclose(dset2_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Dclose failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dclose failed"); break; /*---------------------------------------------------------------------- @@ -1579,13 +1593,14 @@ diff(hid_t file1_id, *---------------------------------------------------------------------- */ case H5TRAV_TYPE_NAMED_DATATYPE: + H5TOOLS_DEBUG("H5TRAV_TYPE_NAMED_DATATYPE 1:%s 2:%s ", path1, path2); if((type1_id = H5Topen2(file1_id, path1, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Topen2 failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Topen2 failed"); if((type2_id = H5Topen2(file2_id, path2, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Topen2 failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Topen2 failed"); if((status = H5Tequal(type1_id, type2_id)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Tequal failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tequal failed"); /* if H5Tequal is > 0 then the datatypes refer to the same datatype */ nfound = (status > 0) ? 0 : 1; @@ -1603,13 +1618,15 @@ diff(hid_t file1_id, * referenced object *----------------------------------------------------------------- */ - if(path1) + if(path1) { + H5TOOLS_DEBUG("call diff_attr 1:%s 2:%s ", path1, path2); nfound += diff_attr(type1_id, type2_id, path1, path2, opts); + } if(H5Tclose(type1_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tclose failed"); if(H5Tclose(type2_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tclose failed"); break; /*---------------------------------------------------------------------- @@ -1617,6 +1634,7 @@ diff(hid_t file1_id, *---------------------------------------------------------------------- */ case H5TRAV_TYPE_GROUP: + H5TOOLS_DEBUG("H5TRAV_TYPE_GROUP 1:%s 2:%s ", path1, path2); if(print_objname(opts, nfound)) do_print_objname("group", path1, path2, opts); @@ -1625,9 +1643,9 @@ diff(hid_t file1_id, print_found(nfound); if((grp1_id = H5Gopen2(file1_id, path1, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Gclose failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Gclose failed"); if((grp2_id = H5Gopen2(file2_id, path2, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Gclose failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Gclose failed"); /*----------------------------------------------------------------- * compare attributes @@ -1635,13 +1653,15 @@ diff(hid_t file1_id, * referenced object *----------------------------------------------------------------- */ - if(path1) + if(path1) { + H5TOOLS_DEBUG("call diff_attr 1:%s 2:%s ", path1, path2); nfound += diff_attr(grp1_id, grp2_id, path1, path2, opts); + } if(H5Gclose(grp1_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Gclose failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Gclose failed"); if(H5Gclose(grp2_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Gclose failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Gclose failed"); break; @@ -1651,6 +1671,7 @@ diff(hid_t file1_id, */ case H5TRAV_TYPE_LINK: { + H5TOOLS_DEBUG("H5TRAV_TYPE_LINK 1:%s 2:%s ", path1, path2); status = HDstrcmp(linkinfo1.trg_path, linkinfo2.trg_path); /* if the target link name is not same then the links are "different" */ @@ -1662,7 +1683,6 @@ diff(hid_t file1_id, /* always print the number of differences found in verbose mode */ if(opts->m_verbose) print_found(nfound); - } break; @@ -1672,6 +1692,7 @@ diff(hid_t file1_id, */ case H5TRAV_TYPE_UDLINK: { + H5TOOLS_DEBUG("H5TRAV_TYPE_UDLINK 1:%s 2:%s ", path1, path2); /* Only external links will have a query function registered */ if(linkinfo1.linfo.type == H5L_TYPE_EXTERNAL && linkinfo2.linfo.type == H5L_TYPE_EXTERNAL) { /* If the buffers are the same size, compare them */ @@ -1772,8 +1793,9 @@ done: /* enable error reporting */ } H5E_END_TRY; - h5diffdebug3("diff finish:%d - errstat:%d\n", nfound, opts->err_stat); + H5TOOLS_DEBUG("diff finish:%d - errstat:%d", nfound, opts->err_stat); + H5TOOLS_ENDDEBUG("exit"); return nfound; } diff --git a/tools/lib/h5diff.h b/tools/lib/h5diff.h index 26bcd95..b04ec23 100644 --- a/tools/lib/h5diff.h +++ b/tools/lib/h5diff.h @@ -57,28 +57,35 @@ struct exclude_path_list { struct exclude_path_list * next; }; +/* Enumeration value for keeping track of whether an error occurred or differences were found */ +typedef enum { + H5DIFF_NO_ERR, /* No error occurred */ + H5DIFF_ERR_DIFF, /* Differences were found */ + H5DIFF_ERR /* An error occurred */ +} diff_err_t; + typedef struct { - int m_quiet; /* quiet mide: no output at all */ - int m_report; /* report mode: print the data */ - int m_verbose; /* verbose mode: print the data, list of objcets, warnings */ - int m_verbose_level; /* control verbose details */ - int d; /* delta, absolute value to compare */ - double delta; /* delta value */ - int p; /* relative error to compare*/ - int use_system_epsilon; /* flag to use system epsilon (1 or 0) */ - double percent; /* relative error value */ - int n; /* count, compare up to count */ - hsize_t count; /* count value */ - hbool_t follow_links; /* follow symbolic links */ - int no_dangle_links; /* return error when find dangling link */ - int err_stat; /* an error ocurred (1, error, 0, no error) */ - int cmn_objs; /* do we have common objects */ - int not_cmp; /* are the objects comparable */ - int contents; /* equal contents */ - int do_nans; /* consider Nans while diffing floats */ - int m_list_not_cmp; /* list not comparable messages */ - int exclude_path; /* exclude path to an object */ - struct exclude_path_list * exclude; /* keep exclude path list */ + int m_quiet; /* quiet mode: no output at all */ + int m_report; /* report mode: print the data */ + int m_verbose; /* verbose mode: print the data, list of objcets, warnings */ + int m_verbose_level; /* control verbose details */ + int d; /* delta, absolute value to compare */ + double delta; /* delta value */ + int p; /* relative error to compare*/ + int use_system_epsilon; /* flag to use system epsilon (1 or 0) */ + double percent; /* relative error value */ + int n; /* count, compare up to count */ + hsize_t count; /* count value */ + hbool_t follow_links; /* follow symbolic links */ + int no_dangle_links; /* return error when find dangling link */ + diff_err_t err_stat; /* an error ocurred (2, error, 1, differences, 0, no error) */ + int cmn_objs; /* do we have common objects */ + int not_cmp; /* are the objects comparable */ + int contents; /* equal contents */ + int do_nans; /* consider Nans while diffing floats */ + int m_list_not_cmp; /* list not comparable messages */ + int exclude_path; /* exclude path to an object */ + struct exclude_path_list * exclude; /* keep exclude path list */ } diff_opt_t; @@ -165,6 +172,13 @@ int diff_can_type( hid_t f_type1, /* file data type */ diff_opt_t *opts, int is_compound); +hsize_t diff_attr_data(hid_t attr1_id, + hid_t attr2_id, + const char *attr1_name, + const char *attr2_name, + const char *path1, + const char *path2, + diff_opt_t *opts); hsize_t diff_attr(hid_t loc1_id, hid_t loc2_id, diff --git a/tools/lib/h5diff_array.c b/tools/lib/h5diff_array.c index c83b88d..f671b06 100644 --- a/tools/lib/h5diff_array.c +++ b/tools/lib/h5diff_array.c @@ -17,6 +17,8 @@ #include "h5diff.h" #include "ph5diff.h" +#define ATTR_NAME_MAX 255 + /*------------------------------------------------------------------------- * printf formatting *------------------------------------------------------------------------- @@ -285,7 +287,7 @@ hsize_t diff_array( mcomp_t members; H5T_class_t type_class; - h5diffdebug2("diff_array start - errstat:%d\n", opts->err_stat); + H5TOOLS_DEBUG("diff_array start - errstat:%d", opts->err_stat); /* get the size. */ size = H5Tget_size(m_type); type_class = H5Tget_class(m_type); @@ -310,6 +312,7 @@ hsize_t diff_array( pos[j] = 0; } + H5TOOLS_DEBUG("diff_array type_class:%d", type_class); switch (type_class) { case H5T_NO_CLASS: case H5T_TIME: @@ -370,6 +373,7 @@ hsize_t diff_array( case H5T_REFERENCE: HDmemset(&members, 0, sizeof(mcomp_t)); get_member_types(m_type, &members); + H5TOOLS_DEBUG("call diff_datum nelmts:%d - errstat:%d", nelmts, opts->err_stat); for (i = 0; i < nelmts; i++) { nfound += diff_datum(mem1 + i * size, mem2 + i * size, m_type, i, rank, dims, acc, pos, opts, name1, name2, container1_id, container2_id, &ph, &members); @@ -378,8 +382,9 @@ hsize_t diff_array( } /* i */ close_member_types(&members); } /* switch */ - h5diffdebug3("diff_array finish:%d - errstat:%d\n", nfound, opts->err_stat); + H5TOOLS_DEBUG("diff_array finish:%d - errstat:%d", nfound, opts->err_stat); + H5TOOLS_ENDDEBUG("exit: %d", nfound); return nfound; } @@ -447,11 +452,11 @@ static hsize_t diff_datum( hbool_t iszero1; hbool_t iszero2; hsize_t nfound = 0; /* differences found */ - hsize_t ret_value = opts->err_stat; double per; hbool_t both_zero; + diff_err_t ret_value = opts->err_stat; - h5difftrace("diff_datum start\n"); + H5TOOLS_DEBUG("diff_datum start - errstat:%d", opts->err_stat); type_size = H5Tget_size(m_type); type_class = H5Tget_class(m_type); @@ -465,14 +470,14 @@ static hsize_t diff_datum( type_class != H5T_STRING && type_class != H5T_VLEN && HDmemcmp(mem1, mem2, type_size) == 0) - HGOTO_DONE(opts->err_stat); + H5TOOLS_GOTO_DONE(opts->err_stat); switch (H5Tget_class(m_type)) { case H5T_NO_CLASS: case H5T_TIME: case H5T_NCLASSES: default: - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "Invalid type class"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Invalid type class"); break; /*------------------------------------------------------------------------- @@ -480,9 +485,9 @@ static hsize_t diff_datum( *------------------------------------------------------------------------- */ case H5T_COMPOUND: - h5difftrace("diff_datum H5T_COMPOUND\n"); + H5TOOLS_DEBUG("diff_datum H5T_COMPOUND"); { - hid_t memb_type = -1; + hid_t memb_type = H5I_INVALID_HID; nmembs = members->n; for (j = 0; j < nmembs; j++) { @@ -500,7 +505,7 @@ static hsize_t diff_datum( *------------------------------------------------------------------------- */ case H5T_STRING: - h5difftrace("diff_datum H5T_STRING\n"); + H5TOOLS_DEBUG("diff_datum H5T_STRING"); { char *s = NULL; char *sx = NULL; @@ -514,7 +519,7 @@ static hsize_t diff_datum( /* if variable length string */ if (H5Tis_variable_str(m_type)) { - h5difftrace("diff_datum H5T_STRING variable\n"); + H5TOOLS_DEBUG("diff_datum H5T_STRING variable"); /* Get pointer to first string */ s1 = *(char **)((void *)mem1); if (s1) @@ -530,7 +535,7 @@ static hsize_t diff_datum( size2 = 0; } else if (H5T_STR_NULLTERM == pad) { - h5difftrace("diff_datum H5T_STRING null term\n"); + H5TOOLS_DEBUG("diff_datum H5T_STRING null term"); /* Get pointer to first string */ s1 = (char*) mem1; if (s1) @@ -567,10 +572,10 @@ static hsize_t diff_datum( * of length of strings. * For now mimic the previous way. */ - h5diffdebug2("diff_datum string size:%d\n", size1); - h5diffdebug2("diff_datum string size:%d\n", size2); + H5TOOLS_DEBUG("diff_datum string size:%d", size1); + H5TOOLS_DEBUG("diff_datum string size:%d", size2); if (size1 != size2) { - h5difftrace("diff_datum string sizes\n"); + H5TOOLS_DEBUG("diff_datum string sizes difference"); nfound++; } if (size1 < size2) { @@ -607,7 +612,7 @@ static hsize_t diff_datum( *------------------------------------------------------------------------- */ case H5T_BITFIELD: - h5difftrace("diff_datum H5T_BITFIELD\n"); + H5TOOLS_DEBUG("diff_datum H5T_BITFIELD"); /* byte-by-byte comparison */ for (u = 0; u < type_size; u++) nfound += character_compare_opt(mem1 + u, mem2 + u, index, rank, dims, acc, pos, opts, obj1, obj2, ph); @@ -618,7 +623,7 @@ static hsize_t diff_datum( *------------------------------------------------------------------------- */ case H5T_OPAQUE: - h5difftrace("diff_datum H5T_OPAQUE\n"); + H5TOOLS_DEBUG("diff_datum H5T_OPAQUE"); /* byte-by-byte comparison */ for (u = 0; u < type_size; u++) nfound += character_compare_opt(mem1 + u, mem2 + u, index, rank, dims, acc, pos, opts, obj1, obj2, ph); @@ -634,7 +639,7 @@ static hsize_t diff_datum( * compared, we convert both bit patterns to their corresponding * enumeration constant and do a string comparison */ - h5difftrace("diff_datum H5T_ENUM\n"); + H5TOOLS_DEBUG("diff_datum H5T_ENUM"); { char enum_name1[1024]; char enum_name2[1024]; @@ -693,10 +698,11 @@ static hsize_t diff_datum( */ case H5T_ARRAY: { - hid_t memb_type = -1; + hid_t memb_type = H5I_INVALID_HID; hsize_t adims[H5S_MAX_RANK]; int ndims; + H5TOOLS_DEBUG("diff_datum H5T_ARRAY"); /* get the array's base datatype for each element */ memb_type = H5Tget_super(m_type); size = H5Tget_size(memb_type); @@ -720,45 +726,324 @@ static hsize_t diff_datum( *------------------------------------------------------------------------- */ case H5T_REFERENCE: + H5TOOLS_DEBUG("diff_datum H5T_REFERENCE"); iszero1 = all_zero(_mem1, H5Tget_size(m_type)); iszero2 = all_zero(_mem2, H5Tget_size(m_type)); if (iszero1 != iszero2) { nfound++; - HGOTO_DONE (opts->err_stat); + H5TOOLS_GOTO_DONE(opts->err_stat); } else if (!iszero1 && !iszero2) { + hid_t obj1_id = H5I_INVALID_HID; + hid_t obj2_id = H5I_INVALID_HID; + /*------------------------------------------------------------------------- - * H5T_STD_REF_DSETREG - * Dataset region reference + * H5T_STD_REF + * Reference *------------------------------------------------------------------------- */ - hid_t obj1_id = -1; - hid_t obj2_id = -1; - if (H5Tequal(m_type, H5T_STD_REF)) { /* if (type_size == H5R_STD_REF_SIZE) */ - H5TOOLS_INFO(H5E_tools_min_info_id_g, "NEW reference type"); + hid_t region1_id = H5I_INVALID_HID; + hid_t region2_id = H5I_INVALID_HID; + H5R_ref_t *ref1_buf = (const H5R_ref_t *)_mem1; + H5R_ref_t *ref2_buf = (const H5R_ref_t *)_mem2; + H5O_type_t obj1_type = -1; /* Object type */ + H5O_type_t obj2_type = -1; /* Object type */ + H5R_type_t ref_type; /* Reference type */ + + H5TOOLS_DEBUG("diff_datum H5T_REFERENCE - H5T_STD_REF"); + ref_type = H5Rget_type(ref1_buf); + switch (ref_type) { + case H5R_OBJECT1: + H5TOOLS_DEBUG("ref_type is H5R_OBJECT1"); + if (H5Rget_obj_type3(ref1_buf, H5P_DEFAULT, &obj1_type) < 0) { + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Rget_obj_type3 object 1 failed"); + } + if (H5Rget_obj_type3(ref2_buf, H5P_DEFAULT, &obj2_type) < 0) { + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Rget_obj_type3 object 2 failed"); + } + + /* check object type */ + if (obj1_type != obj2_type) { + parallel_print("Different object types referenced: <%s> and <%s>", obj1, obj2); + opts->not_cmp = 1; + H5TOOLS_GOTO_DONE(opts->err_stat); + } + + if((obj1_id = H5Ropen_object(ref1_buf, H5P_DEFAULT, H5P_DEFAULT)) < 0) { + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Ropen_object object 1 failed"); + } + if((obj2_id = H5Ropen_object(ref2_buf, H5P_DEFAULT, H5P_DEFAULT)) < 0) { + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Ropen_object object 2 failed"); + } + + switch (obj1_type) { + case H5O_TYPE_DATASET: + nfound = diff_datasetid(obj1_id, obj2_id, NULL, NULL, opts); + break; + + case H5O_TYPE_GROUP: + case H5O_TYPE_NAMED_DATATYPE: + case H5O_TYPE_MAP: + case H5O_TYPE_UNKNOWN: + case H5O_TYPE_NTYPES: + default: + if (opts->m_verbose) + parallel_print("Warning: Comparison not possible of object types referenced: <%s> and <%s>\n", obj1, obj2); + opts->not_cmp = 1; + break; + } /* end switch */ + if(obj1_id >= 0) + if(H5Oclose(obj1_id) < 0) { + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Oclose H5R_OBJECT1 failed"); + } + if(obj2_id >= 0) + if(H5Oclose(obj2_id) < 0) { + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Oclose H5R_OBJECT1 failed"); + } + if(H5Rdestroy(ref2_buf) < 0) + H5TOOLS_ERROR(H5DIFF_ERR, "H5Rdestroy H5R_OBJECT1 failed"); + if(H5Rdestroy(ref1_buf) < 0) + H5TOOLS_ERROR(H5DIFF_ERR, "H5Rdestroy H5R_OBJECT1 failed"); + break; + case H5R_DATASET_REGION1: + H5TOOLS_DEBUG("ref_type is H5R_DATASET_REGION1"); + if((obj1_id = H5Ropen_object(ref1_buf, H5P_DEFAULT, H5P_DEFAULT)) >= 0) { + if((obj2_id = H5Ropen_object(ref2_buf, H5P_DEFAULT, H5P_DEFAULT)) >= 0) { + if((region1_id = H5Ropen_region(ref1_buf, H5P_DEFAULT, H5P_DEFAULT)) >= 0) { + if((region2_id = H5Ropen_region(ref2_buf, H5P_DEFAULT, H5P_DEFAULT)) >= 0) { + nfound = diff_region(obj1_id, obj2_id, region1_id, region2_id, opts); + if(H5Sclose(region2_id) < 0) + H5TOOLS_ERROR(H5DIFF_ERR, "H5Sclose H5R_DATASET_REGION1 failed"); + } + if(H5Sclose(region1_id) < 0) + H5TOOLS_ERROR(H5DIFF_ERR, "H5Sclose H5R_DATASET_REGION1 failed"); + } + if(H5Oclose(obj2_id) < 0) + H5TOOLS_ERROR(H5DIFF_ERR, "H5Oclose H5R_DATASET_REGION1 failed"); + } + else { + H5TOOLS_ERROR(H5DIFF_ERR, "H5Ropen_object H5R_DATASET_REGION1 failed"); + } + if(H5Oclose(obj1_id) < 0) + H5TOOLS_ERROR(H5DIFF_ERR, "H5Oclose H5R_DATASET_REGION1 failed"); + } + else { + H5TOOLS_ERROR(H5DIFF_ERR, "H5Ropen_object H5R_DATASET_REGION1 failed"); + } + if(H5Rdestroy(ref2_buf) < 0) + H5TOOLS_ERROR(H5DIFF_ERR, "H5Rdestroy H5R_DATASET_REGION1 failed"); + if(H5Rdestroy(ref1_buf) < 0) + H5TOOLS_ERROR(H5DIFF_ERR, "H5Rdestroy H5R_DATASET_REGION1 failed"); + break; + case H5R_OBJECT2: + H5TOOLS_DEBUG("ref_type is H5R_OBJECT2"); + if (H5Rget_obj_type3(ref1_buf, H5P_DEFAULT, &obj1_type) < 0) { + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Rget_obj_type3 object 1 failed"); + } + if (H5Rget_obj_type3(ref2_buf, H5P_DEFAULT, &obj2_type) < 0) { + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Rget_obj_type3 object 2 failed"); + } + + /* check object type */ + if (obj1_type != obj2_type) { + parallel_print("Different object types referenced: <%s> and <%s>", obj1, obj2); + opts->not_cmp = 1; + H5TOOLS_GOTO_DONE(opts->err_stat); + } + + if((obj1_id = H5Ropen_object(ref1_buf, H5P_DEFAULT, H5P_DEFAULT)) < 0) { + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Ropen_object object 1 failed"); + } + if((obj2_id = H5Ropen_object(ref2_buf, H5P_DEFAULT, H5P_DEFAULT)) < 0) { + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Ropen_object object 2 failed"); + } + + switch (obj1_type) { + case H5O_TYPE_DATASET: + H5TOOLS_DEBUG("ref_type is H5R_OBJECT2 : DATASET"); + nfound = diff_datasetid(obj1_id, obj2_id, NULL, NULL, opts); + break; + + case H5O_TYPE_GROUP: + H5TOOLS_DEBUG("ref_type is H5R_OBJECT2 : GROUP"); + if (opts->m_verbose) + parallel_print("Warning: Comparison not possible of group object types referenced: <%s> and <%s>\n", obj1, obj2); + opts->not_cmp = 1; + break; + + case H5O_TYPE_NAMED_DATATYPE: + H5TOOLS_DEBUG("ref_type is H5R_OBJECT2 : NAMED"); + if (opts->m_verbose) + parallel_print("Warning: Comparison not possible of named datatypes object types referenced: <%s> and <%s>\n", obj1, obj2); + opts->not_cmp = 1; + break; + + case H5O_TYPE_MAP: + case H5O_TYPE_UNKNOWN: + case H5O_TYPE_NTYPES: + default: + if (opts->m_verbose) + parallel_print("Warning: Comparison not possible of object types referenced: <%s> and <%s>\n", obj1, obj2); + opts->not_cmp = 1; + break; + } /* end switch */ + if(obj1_id >= 0) + if(H5Oclose(obj1_id) < 0) { + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Oclose H5R_OBJECT2 failed"); + } + if(obj2_id >= 0) + if(H5Oclose(obj2_id) < 0) { + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Oclose H5R_OBJECT2 failed"); + } + if(H5Rdestroy(ref2_buf) < 0) + H5TOOLS_ERROR(H5DIFF_ERR, "H5Rdestroy H5R_OBJECT2 failed"); + if(H5Rdestroy(ref1_buf) < 0) + H5TOOLS_ERROR(H5DIFF_ERR, "H5Rdestroy H5R_OBJECT2 failed"); + break; + case H5R_DATASET_REGION2: + H5TOOLS_DEBUG("ref_type is H5R_DATASET_REGION2"); + + /* if (obj_id < 0) - could mean that no reference was written do not throw failure */ + obj1_id = H5Ropen_object(ref1_buf, H5P_DEFAULT, H5P_DEFAULT); + obj2_id = H5Ropen_object(ref2_buf, H5P_DEFAULT, H5P_DEFAULT); + if((obj1_id < 0) || (obj1_id < 0)) { + H5TOOLS_INFO("H5Ropen_object H5R_DATASET_REGION2 failed"); + } + else { + H5TOOLS_DEBUG("open_region - H5R_DATASET_REGION2"); + if((region1_id = H5Ropen_region(ref1_buf, H5P_DEFAULT, H5P_DEFAULT)) >= 0) { + if (h5tools_is_zero(ref1_buf, H5Tget_size(H5T_STD_REF))) { + H5TOOLS_DEBUG("NULL H5R_DATASET_REGION2"); + } + else { + if((region2_id = H5Ropen_region(ref2_buf, H5P_DEFAULT, H5P_DEFAULT)) >= 0) { + if (h5tools_is_zero(ref2_buf, H5Tget_size(H5T_STD_REF))) { + H5TOOLS_DEBUG("NULL H5R_DATASET_REGION2"); + } + else { + nfound = diff_region(obj1_id, obj2_id, region1_id, region2_id, opts); + } + if(H5Sclose(region2_id) < 0) + H5TOOLS_ERROR(H5DIFF_ERR, "H5Sclose H5R_DATASET_REGION2 failed"); + } + else + H5TOOLS_ERROR(H5DIFF_ERR, "H5Ropen_region H5R_DATASET_REGION2 failed"); + } /* end else to if (h5tools_is_zero(... */ + if(H5Sclose(region1_id) < 0) + H5TOOLS_ERROR(H5DIFF_ERR, "H5Sclose H5R_DATASET_REGION2 failed"); + } + else + H5TOOLS_ERROR(H5DIFF_ERR, "H5Ropen_region H5R_DATASET_REGION2 failed"); + if (obj1_id >= 0) + if(H5Dclose(obj1_id) < 0) { + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Dclose H5R_DATASET_REGION2 failed"); + } + if (obj2_id >= 0) + if(H5Dclose(obj2_id) < 0) { + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Dclose H5R_DATASET_REGION2 failed"); + } + if(H5Rdestroy(ref1_buf) < 0) + H5TOOLS_ERROR(H5DIFF_ERR, "H5Rdestroy H5R_DATASET_REGION2 failed"); + if(H5Rdestroy(ref2_buf) < 0) + H5TOOLS_ERROR(H5DIFF_ERR, "H5Rdestroy H5R_DATASET_REGION2 failed"); + } + break; + case H5R_ATTR: + { + char name1[ATTR_NAME_MAX]; + char name2[ATTR_NAME_MAX]; + + H5TOOLS_DEBUG("ref_type is H5R_ATTR"); + if((obj1_id = H5Ropen_attr(ref1_buf, H5P_DEFAULT, H5P_DEFAULT)) < 0) { + parallel_print("Warning: Cannot open referenced attribute: attribute 1\n"); + H5TOOLS_INFO("H5Ropen_attr object 1 failed"); + } + if((obj2_id = H5Ropen_attr(ref2_buf, H5P_DEFAULT, H5P_DEFAULT)) < 0) { + parallel_print("Warning: Cannot open referenced attribute: attribute 2\n"); + H5TOOLS_INFO("H5Ropen_attr object 2 failed"); + } + + if((obj1_id < 0) || (obj1_id < 0)) { + H5TOOLS_INFO("H5Ropen_attr H5R_ATTR failed"); + } + else { + /* get name */ + if(H5Aget_name(obj1_id, (size_t)ATTR_NAME_MAX, name1) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_name first attribute failed"); + /* get name */ + if(H5Aget_name(obj2_id, (size_t)ATTR_NAME_MAX, name2) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_name second attribute failed"); + + H5TOOLS_DEBUG("H5R_ATTR diff_attr_data - name1=%s, name2=%s", name1, name2); + nfound = diff_attr_data(obj1_id, obj2_id, name1, name2, NULL, NULL, opts); + } + + if(obj1_id >= 0) + if(H5Aclose(obj1_id) < 0) { + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Aclose H5R_ATTR failed"); + } + if(obj2_id >= 0) + if(H5Aclose(obj2_id) < 0) { + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Aclose H5R_ATTR failed"); + } + if(H5Rdestroy(ref2_buf) < 0) + H5TOOLS_ERROR(H5DIFF_ERR, "H5Rdestroy H5R_ATTR failed"); + if(H5Rdestroy(ref1_buf) < 0) + H5TOOLS_ERROR(H5DIFF_ERR, "H5Rdestroy H5R_ATTR failed"); + } + break; + case H5R_BADTYPE: + case H5R_MAXTYPE: + default: + break; + } /* end switch */ + H5TOOLS_DEBUG("diff_datum H5T_REFERENCE - H5T_STD_REF complete nfound:%d - errstat:%d", nfound, opts->err_stat); } + /*------------------------------------------------------------------------- + * H5T_STD_REF_DSETREG + * Dataset region reference + *------------------------------------------------------------------------- + */ else if (H5Tequal(m_type, H5T_STD_REF_DSETREG)) { /* if (type_size == H5R_DSET_REG_REF_BUF_SIZE) */ - hid_t region1_id = -1; - hid_t region2_id = -1; + hid_t region1_id = H5I_INVALID_HID; + hid_t region2_id = H5I_INVALID_HID; + + H5TOOLS_INFO("H5T_STD_REF_DSETREG reference type"); if ((obj1_id = H5Rdereference2(container1_id, H5P_DEFAULT, H5R_DATASET_REGION, _mem1)) < 0) { - opts->err_stat = 1; - H5TOOLS_INFO(H5E_tools_min_id_g, "H5Rdereference2 object 1 failed"); + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Rdereference2 object 1 failed"); } if ((obj2_id = H5Rdereference2(container2_id, H5P_DEFAULT, H5R_DATASET_REGION, _mem2)) < 0) { - opts->err_stat = 1; - H5TOOLS_INFO(H5E_tools_min_id_g, "H5Rdereference2 object 2 failed"); + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Rdereference2 object 2 failed"); } if ((region1_id = H5Rget_region(container1_id, H5R_DATASET_REGION, _mem1)) < 0) { - opts->err_stat = 1; - H5TOOLS_INFO(H5E_tools_min_id_g, "H5Rget_region object 1 failed"); + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Rget_region object 1 failed"); } if ((region2_id = H5Rget_region(container2_id, H5R_DATASET_REGION, _mem2)) < 0) { - opts->err_stat = 1; - H5TOOLS_INFO(H5E_tools_min_id_g, "H5Rget_region object 2 failed"); + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Rget_region object 2 failed"); } nfound = diff_region(obj1_id, obj2_id, region1_id, region2_id, opts); @@ -779,29 +1064,31 @@ static hsize_t diff_datum( H5O_type_t obj1_type; H5O_type_t obj2_type; + H5TOOLS_INFO("H5T_STD_REF_OBJ reference type"); + if (H5Rget_obj_type2(container1_id, H5R_OBJECT, _mem1, &obj1_type) < 0) { - opts->err_stat = 1; - H5TOOLS_INFO(H5E_tools_min_id_g, "H5Rget_obj_type2 object 1 failed"); + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Rget_obj_type2 object 1 failed"); } if (H5Rget_obj_type2(container2_id, H5R_OBJECT, _mem2, &obj2_type) < 0) { - opts->err_stat = 1; - H5TOOLS_INFO(H5E_tools_min_id_g, "H5Rget_obj_type2 object 2 failed"); + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Rget_obj_type2 object 2 failed"); } /* check object type */ if (obj1_type != obj2_type) { parallel_print("Different object types referenced: <%s> and <%s>", obj1, obj2); opts->not_cmp = 1; - HGOTO_DONE (opts->err_stat); + H5TOOLS_GOTO_DONE(opts->err_stat); } if ((obj1_id = H5Rdereference2(container1_id, H5P_DEFAULT, H5R_OBJECT, _mem1)) < 0) { - opts->err_stat = 1; - H5TOOLS_INFO(H5E_tools_min_id_g, "H5Rdereference2 object 1 failed"); + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Rdereference2 object 1 failed"); } if ((obj2_id = H5Rdereference2(container2_id, H5P_DEFAULT, H5R_OBJECT, _mem2)) < 0) { - opts->err_stat = 1; - H5TOOLS_INFO(H5E_tools_min_id_g, "H5Rdereference2 object 2 failed"); + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("H5Rdereference2 object 2 failed"); } /* compare */ @@ -809,9 +1096,7 @@ static hsize_t diff_datum( nfound = diff_datasetid(obj1_id, obj2_id, NULL, NULL, opts); else { if (opts->m_verbose) - parallel_print( - "Warning: Comparison not possible of object types referenced: <%s> and <%s>\n", - obj1, obj2); + parallel_print("Warning: Comparison not possible of object types referenced: <%s> and <%s>\n", obj1, obj2); opts->not_cmp = 1; } @@ -819,6 +1104,7 @@ static hsize_t diff_datum( H5Oclose(obj2_id); }/*object reference*/ }/*is zero*/ + H5TOOLS_DEBUG("diff_datum H5T_REFERENCE complete"); break; /*------------------------------------------------------------------------- @@ -827,8 +1113,9 @@ static hsize_t diff_datum( */ case H5T_VLEN: { - hid_t memb_type = -1; + hid_t memb_type = H5I_INVALID_HID; + H5TOOLS_DEBUG("diff_datum H5T_VLEN"); /* get the VL sequences's base datatype for each element */ memb_type = H5Tget_super(m_type); size = H5Tget_size(memb_type); @@ -849,6 +1136,7 @@ static hsize_t diff_datum( *------------------------------------------------------------------------- */ case H5T_INTEGER: + H5TOOLS_DEBUG("diff_datum H5T_INTEGER"); type_sign = H5Tget_sign(m_type); /*------------------------------------------------------------------------- * H5T_NATIVE_SCHAR @@ -859,7 +1147,7 @@ static hsize_t diff_datum( char temp2_char; if(type_size != sizeof(char)) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "Type size is not char size"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Type size is not char size"); HDmemcpy(&temp1_char, mem1, sizeof(char)); HDmemcpy(&temp2_char, mem2, sizeof(char)); /* -d and !-p */ @@ -934,7 +1222,7 @@ static hsize_t diff_datum( unsigned char temp2_uchar; if(type_size != sizeof(unsigned char)) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "Type size is not unsigned char size"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Type size is not unsigned char size"); HDmemcpy(&temp1_uchar, mem1, sizeof(unsigned char)); HDmemcpy(&temp2_uchar, mem2, sizeof(unsigned char)); @@ -1010,7 +1298,7 @@ static hsize_t diff_datum( short temp2_short; if(type_size != sizeof(short)) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "Type size is not short size"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Type size is not short size"); HDmemcpy(&temp1_short, mem1, sizeof(short)); HDmemcpy(&temp2_short, mem2, sizeof(short)); @@ -1086,7 +1374,7 @@ static hsize_t diff_datum( unsigned short temp2_ushort; if(type_size != sizeof(unsigned short)) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "Type size is not unsigned short size"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Type size is not unsigned short size"); HDmemcpy(&temp1_ushort, mem1, sizeof(unsigned short)); HDmemcpy(&temp2_ushort, mem2, sizeof(unsigned short)); @@ -1162,7 +1450,7 @@ static hsize_t diff_datum( int temp2_int; if(type_size != sizeof(int)) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "Type size is not int size"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Type size is not int size"); HDmemcpy(&temp1_int, mem1, sizeof(int)); HDmemcpy(&temp2_int, mem2, sizeof(int)); @@ -1238,7 +1526,7 @@ static hsize_t diff_datum( unsigned int temp2_uint; if(type_size != sizeof(unsigned int)) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "Type size is not unsigned int size"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Type size is not unsigned int size"); HDmemcpy(&temp1_uint, mem1, sizeof(unsigned int)); HDmemcpy(&temp2_uint, mem2, sizeof(unsigned int)); @@ -1314,7 +1602,7 @@ static hsize_t diff_datum( long temp2_long; if(type_size != sizeof(long)) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "Type size is not long size"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Type size is not long size"); HDmemcpy(&temp1_long, mem1, sizeof(long)); HDmemcpy(&temp2_long, mem2, sizeof(long)); @@ -1390,7 +1678,7 @@ static hsize_t diff_datum( unsigned long temp2_ulong; if(type_size != sizeof(unsigned long)) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "Type size is not unsigned long size"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Type size is not unsigned long size"); HDmemcpy(&temp1_ulong, mem1, sizeof(unsigned long)); HDmemcpy(&temp2_ulong, mem2, sizeof(unsigned long)); @@ -1467,6 +1755,7 @@ static hsize_t diff_datum( * H5T_NATIVE_FLOAT *------------------------------------------------------------------------- */ + H5TOOLS_DEBUG("diff_datum H5T_FLOAT"); if (type_size == 4) { float temp1_float; float temp2_float; @@ -1474,7 +1763,7 @@ static hsize_t diff_datum( hbool_t isnan2 = FALSE; if(type_size != sizeof(float)) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "Type size is not float size"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Type size is not float size"); HDmemcpy(&temp1_float, mem1, sizeof(float)); HDmemcpy(&temp2_float, mem2, sizeof(float)); @@ -1633,7 +1922,7 @@ static hsize_t diff_datum( hbool_t isnan2 = FALSE; if(type_size != sizeof(double)) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "Type size is not double size"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Type size is not double size"); HDmemcpy(&temp1_double, mem1, sizeof(double)); HDmemcpy(&temp2_double, mem2, sizeof(double)); @@ -1792,7 +2081,7 @@ static hsize_t diff_datum( hbool_t isnan2 = FALSE; if(type_size != sizeof(long double)) { - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "Type size is not long double size"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Type size is not long double size"); } HDmemcpy(&temp1_double, mem1, sizeof(long double)); @@ -1947,8 +2236,9 @@ static hsize_t diff_datum( done: opts->err_stat = opts->err_stat | ret_value; - h5diffdebug3("diff_datum finish:%d - errstat:%d\n", nfound, opts->err_stat); + H5TOOLS_DEBUG("diff_datum finish:%d - errstat:%d", nfound, opts->err_stat); + H5TOOLS_ENDDEBUG("exit"); return nfound; } @@ -2025,7 +2315,6 @@ void print_points(int i, hsize_t *ptdata, int ndims) { static hsize_t diff_region(hid_t obj1_id, hid_t obj2_id, hid_t region1_id, hid_t region2_id, diff_opt_t *opts) { - hsize_t ret_value = 0; hssize_t nblocks1, npoints1; hssize_t nblocks2, npoints2; hsize_t alloc_size; @@ -2036,6 +2325,9 @@ static hsize_t diff_region(hid_t obj1_id, hid_t obj2_id, hid_t region1_id, hid_t int i, j; hsize_t nfound_b = 0; /* block differences found */ hsize_t nfound_p = 0; /* point differences found */ + hsize_t ret_value = 0; + + H5TOOLS_DEBUG("diff_region start"); ndims1 = H5Sget_simple_extent_ndims(region1_id); ndims2 = H5Sget_simple_extent_ndims(region2_id); @@ -2052,10 +2344,12 @@ static hsize_t diff_region(hid_t obj1_id, hid_t obj2_id, hid_t region1_id, hid_t npoints1 = H5Sget_select_elem_npoints(region1_id); npoints2 = H5Sget_select_elem_npoints(region2_id); } H5E_END_TRY; + H5TOOLS_DEBUG("diff_region blocks: 1=%ld-2=%ld", nblocks1, nblocks2); + H5TOOLS_DEBUG("diff_region points: 1=%ld-2=%ld", npoints1, npoints2); if (nblocks1 != nblocks2 || npoints1 != npoints2 || ndims1 != ndims2) { opts->not_cmp = 1; - HGOTO_DONE (0); + H5TOOLS_GOTO_DONE(0); } /*------------------------------------------------------------------------- @@ -2063,21 +2357,22 @@ static hsize_t diff_region(hid_t obj1_id, hid_t obj2_id, hid_t region1_id, hid_t *------------------------------------------------------------------------- */ if (nblocks1 > 0) { + H5TOOLS_DEBUG("region compare blocks"); HDassert(ndims1 > 0); alloc_size = (hsize_t) nblocks1 * (unsigned) ndims1 * 2 * sizeof(ptdata1[0]); HDassert(alloc_size == (hsize_t)((size_t )alloc_size)); /*check for overflow*/ if((ptdata1 = (hsize_t *) HDmalloc((size_t )alloc_size)) == NULL) { - opts->err_stat = 1; - H5TOOLS_INFO(H5E_tools_min_id_g, "Buffer allocation failed"); + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("Buffer allocation failed"); } else { H5_CHECK_OVERFLOW(nblocks1, hssize_t, hsize_t); H5Sget_select_hyper_blocklist(region1_id, (hsize_t) 0, (hsize_t) nblocks1, ptdata1); if((ptdata2 = (hsize_t *) HDmalloc((size_t )alloc_size)) == NULL) { - opts->err_stat = 1; - H5TOOLS_INFO(H5E_tools_min_id_g, "Buffer allocation failed"); + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("Buffer allocation failed"); } else { H5_CHECK_OVERFLOW(nblocks2, hssize_t, hsize_t); @@ -2127,20 +2422,21 @@ static hsize_t diff_region(hid_t obj1_id, hid_t obj2_id, hid_t region1_id, hid_t *------------------------------------------------------------------------- */ if (npoints1 > 0) { + H5TOOLS_DEBUG("region compare points"); alloc_size = (hsize_t) npoints1 * (unsigned) ndims1 * sizeof(ptdata1[0]); HDassert(alloc_size == (hsize_t)((size_t )alloc_size)); /*check for overflow*/ if((ptdata1 = (hsize_t *) HDmalloc((size_t )alloc_size)) == NULL) { - opts->err_stat = 1; - H5TOOLS_INFO(H5E_tools_min_id_g, "Buffer allocation failed"); + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("Buffer allocation failed"); } else { H5_CHECK_OVERFLOW(npoints1, hssize_t, hsize_t); H5Sget_select_elem_pointlist(region1_id, (hsize_t) 0, (hsize_t) npoints1, ptdata1); if((ptdata2 = (hsize_t *) HDmalloc((size_t )alloc_size)) == NULL) { - opts->err_stat = 1; - H5TOOLS_INFO(H5E_tools_min_id_g, "Buffer allocation failed"); + opts->err_stat = H5DIFF_ERR; + H5TOOLS_INFO("Buffer allocation failed"); } else { H5_CHECK_OVERFLOW(npoints1, hssize_t, hsize_t); @@ -2191,6 +2487,7 @@ static hsize_t diff_region(hid_t obj1_id, hid_t obj2_id, hid_t region1_id, hid_t parallel_print(")"); } + parallel_print("\n"); #endif HDfree(ptdata1); @@ -2203,6 +2500,7 @@ static hsize_t diff_region(hid_t obj1_id, hid_t obj2_id, hid_t region1_id, hid_t ret_value = nfound_p + nfound_b; done: + H5TOOLS_ENDDEBUG("exit with diffs:%d", ret_value); return ret_value; } @@ -2224,7 +2522,7 @@ static hsize_t character_compare(char *mem1, char *mem2, hsize_t i, size_t u, HDmemcpy(&temp1_uchar, mem1, sizeof(unsigned char)); HDmemcpy(&temp2_uchar, mem2, sizeof(unsigned char)); - h5diffdebug3("character_compare start %d=%d\n",temp1_uchar,temp2_uchar); + H5TOOLS_DEBUG("character_compare start %d=%d",temp1_uchar,temp2_uchar); if (temp1_uchar != temp2_uchar) { if (print_data(opts)) { @@ -2237,8 +2535,9 @@ static hsize_t character_compare(char *mem1, char *mem2, hsize_t i, size_t u, } nfound++; } - h5difftrace("character_compare finish\n"); + H5TOOLS_DEBUG("character_compare finish"); + H5TOOLS_ENDDEBUG("exit: %d", nfound); return nfound; } @@ -2263,7 +2562,6 @@ static hsize_t character_compare_opt(unsigned char *mem1, unsigned char *mem2, HDmemcpy(&temp1_uchar, mem1, sizeof(unsigned char)); HDmemcpy(&temp2_uchar, mem2, sizeof(unsigned char)); - h5difftrace("character_compare_opt start\n"); /* -d and !-p */ if (opts->d && !opts->p) { @@ -2307,7 +2605,7 @@ static hsize_t character_compare_opt(unsigned char *mem1, unsigned char *mem2, parallel_print(I_FORMAT, temp1_uchar, temp2_uchar, PDIFF(temp1_uchar, temp2_uchar)); } nfound++; - } h5difftrace("character_compare_opt finish\n"); + } return nfound; } @@ -2335,8 +2633,6 @@ static hsize_t diff_float(unsigned char *mem1, unsigned char *mem2, hbool_t isnan1 = FALSE; hbool_t isnan2 = FALSE; - h5difftrace("diff_float start\n"); - /*------------------------------------------------------------------------- * -d and !-p *------------------------------------------------------------------------- @@ -2520,7 +2816,6 @@ static hsize_t diff_float(unsigned char *mem1, unsigned char *mem2, return nfound; } /* nelmts */ } - h5difftrace("diff_float finish\n"); return nfound; } @@ -2548,7 +2843,6 @@ static hsize_t diff_double(unsigned char *mem1, unsigned char *mem2, hbool_t isnan1 = FALSE; hbool_t isnan2 = FALSE; - h5difftrace("diff_double start\n"); /*------------------------------------------------------------------------- * -d and !-p *------------------------------------------------------------------------- @@ -2731,7 +3025,6 @@ static hsize_t diff_double(unsigned char *mem1, unsigned char *mem2, return nfound; } /* nelmts */ } - h5difftrace("diff_double finish\n"); return nfound; } @@ -2769,8 +3062,6 @@ static hsize_t diff_ldouble(unsigned char *mem1, hbool_t isnan1 = FALSE; hbool_t isnan2 = FALSE; - h5difftrace("diff_ldouble start\n"); - /*------------------------------------------------------------------------- * -d and !-p *------------------------------------------------------------------------- @@ -2949,7 +3240,6 @@ static hsize_t diff_ldouble(unsigned char *mem1, return nfound; } /* nelmts */ } - h5difftrace("diff_ldouble finish\n"); return nfound; } @@ -2976,7 +3266,6 @@ static hsize_t diff_schar(unsigned char *mem1, unsigned char *mem2, double per; hbool_t both_zero; - h5difftrace("diff_schar start\n"); /* -d and !-p */ if (opts->d && !opts->p) { for (i = 0; i < nelmts; i++) { @@ -3077,7 +3366,6 @@ static hsize_t diff_schar(unsigned char *mem1, unsigned char *mem2, return nfound; } /* nelmts */ } - h5difftrace("diff_schar finish\n"); return nfound; } @@ -3102,7 +3390,6 @@ static hsize_t diff_uchar(unsigned char *mem1, unsigned char *mem2, double per; hbool_t both_zero; - h5difftrace("diff_uchar start\n"); /* -d and !-p */ if (opts->d && !opts->p) { for (i = 0; i < nelmts; i++) { @@ -3203,7 +3490,6 @@ static hsize_t diff_uchar(unsigned char *mem1, unsigned char *mem2, return nfound; } /* nelmts */ } - h5difftrace("diff_uchar finish\n"); return nfound; } @@ -3228,7 +3514,6 @@ static hsize_t diff_short(unsigned char *mem1, unsigned char *mem2, double per; hbool_t both_zero; - h5difftrace("diff_short start\n"); /* -d and !-p */ if (opts->d && !opts->p) { for (i = 0; i < nelmts; i++) { @@ -3329,7 +3614,6 @@ static hsize_t diff_short(unsigned char *mem1, unsigned char *mem2, return nfound; } /* nelmts */ } - h5difftrace("diff_short finish\n"); return nfound; } @@ -3355,7 +3639,6 @@ static hsize_t diff_ushort(unsigned char *mem1, unsigned char *mem2, double per; hbool_t both_zero; - h5difftrace("diff_ushort start\n"); /* -d and !-p */ if (opts->d && !opts->p) { for (i = 0; i < nelmts; i++) { @@ -3456,7 +3739,6 @@ static hsize_t diff_ushort(unsigned char *mem1, unsigned char *mem2, return nfound; } /* nelmts */ } - h5difftrace("diff_ushort finish\n"); return nfound; } @@ -3481,7 +3763,6 @@ static hsize_t diff_int(unsigned char *mem1, unsigned char *mem2, double per; hbool_t both_zero; - h5difftrace("diff_int start\n"); /* -d and !-p */ if (opts->d && !opts->p) { for (i = 0; i < nelmts; i++) { @@ -3583,7 +3864,6 @@ static hsize_t diff_int(unsigned char *mem1, unsigned char *mem2, } /* nelmts */ } - h5difftrace("diff_int finish\n"); return nfound; } @@ -3607,7 +3887,6 @@ static hsize_t diff_uint(unsigned char *mem1, unsigned char *mem2, double per; hbool_t both_zero; - h5difftrace("diff_uint start\n"); /* -d and !-p */ if (opts->d && !opts->p) { for (i = 0; i < nelmts; i++) { @@ -3709,7 +3988,6 @@ static hsize_t diff_uint(unsigned char *mem1, unsigned char *mem2, return nfound; } /* nelmts */ } - h5difftrace("diff_uint finish\n"); return nfound; } @@ -3734,7 +4012,6 @@ static hsize_t diff_long(unsigned char *mem1, unsigned char *mem2, double per; hbool_t both_zero; - h5difftrace("diff_long start\n"); /* -d and !-p */ if (opts->d && !opts->p) { for (i = 0; i < nelmts; i++) { @@ -3837,7 +4114,6 @@ static hsize_t diff_long(unsigned char *mem1, unsigned char *mem2, return nfound; } /* nelmts */ } - h5difftrace("diff_long finish\n"); return nfound; } @@ -3862,8 +4138,6 @@ static hsize_t diff_ulong(unsigned char *mem1, unsigned char *mem2, double per; hbool_t both_zero; - h5difftrace("diff_ulong start\n"); - /* -d and !-p */ if (opts->d && !opts->p) { for (i = 0; i < nelmts; i++) { @@ -3967,7 +4241,6 @@ static hsize_t diff_ulong(unsigned char *mem1, unsigned char *mem2, return nfound; } /* nelmts */ } - h5difftrace("diff_ulong finish\n"); return nfound; } @@ -3992,7 +4265,6 @@ static hsize_t diff_llong(unsigned char *mem1, unsigned char *mem2, double per; hbool_t both_zero; - h5difftrace("diff_llong start\n"); /* -d and !-p */ if (opts->d && !opts->p) { for (i = 0; i < nelmts; i++) { @@ -4094,7 +4366,6 @@ static hsize_t diff_llong(unsigned char *mem1, unsigned char *mem2, return nfound; } /* nelmts */ } - h5difftrace("diff_llong finish\n"); return nfound; } @@ -4120,7 +4391,6 @@ static hsize_t diff_ullong(unsigned char *mem1, unsigned char *mem2, double per; hbool_t both_zero; - h5difftrace("diff_ullong start\n"); /* -d and !-p */ if (opts->d && !opts->p) { for (i = 0; i < nelmts; i++) { @@ -4226,7 +4496,6 @@ static hsize_t diff_ullong(unsigned char *mem1, unsigned char *mem2, return nfound; } /* nelmts */ } - h5difftrace("diff_ullong finish\n"); return nfound; } @@ -4240,26 +4509,26 @@ static hsize_t diff_ullong(unsigned char *mem1, unsigned char *mem2, static int ull2float(unsigned long long ull_value, float *f_value) { - int ret_value = SUCCEED; - hid_t dxpl_id = -1; + hid_t dxpl_id = H5I_INVALID_HID; unsigned char *buf = NULL; size_t src_size; size_t dst_size; + int ret_value = 0; - h5difftrace("ull2float start\n"); + H5TOOLS_DEBUG("ull2float start"); if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pcreate failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Pcreate failed"); src_size = H5Tget_size(H5T_NATIVE_ULLONG); dst_size = H5Tget_size(H5T_NATIVE_FLOAT); if((buf = (unsigned char*) HDcalloc((size_t )1, MAX(src_size, dst_size))) == NULL) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "Could not allocate buffer for dims"); + H5TOOLS_GOTO_ERROR(FAIL, "Could not allocate buffer for dims"); HDmemcpy(buf, &ull_value, src_size); /* do conversion */ if (H5Tconvert(H5T_NATIVE_ULLONG, H5T_NATIVE_FLOAT, (size_t) 1, buf, NULL, dxpl_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tconvert failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Tconvert failed"); HDmemcpy(f_value, buf, dst_size); @@ -4271,8 +4540,9 @@ done: if (buf) HDfree(buf); - h5difftrace("ull2float finish\n"); + H5TOOLS_DEBUG("ull2float finish"); + H5TOOLS_ENDDEBUG("exit"); return ret_value; } @@ -4283,7 +4553,6 @@ done: *------------------------------------------------------------------------- */ static hbool_t equal_double(double value, double expected, diff_opt_t *opts) { - h5difftrace("equal_double start\n"); if (opts->do_nans) { /*------------------------------------------------------------------------- * detect NaNs @@ -4314,8 +4583,6 @@ static hbool_t equal_double(double value, double expected, diff_opt_t *opts) { if (ABS((value-expected)) < DBL_EPSILON) return TRUE; - h5difftrace("equal_double finish\n"); - return FALSE; } @@ -4330,7 +4597,6 @@ static hbool_t equal_double(double value, double expected, diff_opt_t *opts) { static hbool_t equal_ldouble(long double value, long double expected, diff_opt_t *opts) { - h5difftrace("equal_ldouble start\n"); if (opts->do_nans) { /*------------------------------------------------------------------------- * detect NaNs @@ -4361,8 +4627,6 @@ hbool_t equal_ldouble(long double value, long double expected, diff_opt_t *opts) if (ABS((value-expected)) < DBL_EPSILON) return TRUE; - h5difftrace("equal_ldouble finish\n"); - return FALSE; } @@ -4375,7 +4639,6 @@ hbool_t equal_ldouble(long double value, long double expected, diff_opt_t *opts) *------------------------------------------------------------------------- */ static hbool_t equal_float(float value, float expected, diff_opt_t *opts) { - h5difftrace("equal_float start\n"); if (opts->do_nans) { /*------------------------------------------------------------------------- * detect NaNs @@ -4406,8 +4669,6 @@ static hbool_t equal_float(float value, float expected, diff_opt_t *opts) { if (ABS( (value-expected) ) < FLT_EPSILON) return TRUE; - h5difftrace("equal_float finish\n"); - return FALSE; } @@ -4423,7 +4684,6 @@ static hbool_t my_isnan(dtype_t type, void *val) { hbool_t retval = FALSE; char s[256]; - h5difftrace("my_isnan start\n"); if (FLT_FLOAT == type) { float x; @@ -4483,8 +4743,6 @@ static hbool_t my_isnan(dtype_t type, void *val) { } } - h5difftrace("my_isnan finish\n"); - return retval; } diff --git a/tools/lib/h5diff_attr.c b/tools/lib/h5diff_attr.c index cd906af..e92e141 100644 --- a/tools/lib/h5diff_attr.c +++ b/tools/lib/h5diff_attr.c @@ -139,52 +139,57 @@ static void table_attr_mark_exist(unsigned *exist, char *name, table_attrs_t *ta *------------------------------------------------------------------------*/ static herr_t build_match_list_attrs(hid_t loc1_id, hid_t loc2_id, table_attrs_t ** table_out, diff_opt_t *opts) { - int ret_value = 0; - H5O_info_t oinfo1, oinfo2; /* Object info */ - hid_t attr1_id = -1; /* attr ID */ - hid_t attr2_id = -1; /* attr ID */ - size_t curr1 = 0; - size_t curr2 = 0; - unsigned infile[2]; - char name1[ATTR_NAME_MAX]; - char name2[ATTR_NAME_MAX]; - int cmp; - unsigned i; table_attrs_t *table_lp = NULL; - - h5difftrace("build_match_list_attrs start\n"); - - if(H5Oget_info2(loc1_id, &oinfo1, H5O_INFO_NUM_ATTRS) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Oget_info first object failed"); - if(H5Oget_info2(loc2_id, &oinfo2, H5O_INFO_NUM_ATTRS) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Oget_info second object failed"); + H5O_info_t oinfo1, oinfo2; /* Object info */ + hid_t attr1_id = H5I_INVALID_HID; /* attr ID */ + hid_t attr2_id = H5I_INVALID_HID; /* attr ID */ + size_t curr1 = 0; + size_t curr2 = 0; + unsigned infile[2]; + char name1[ATTR_NAME_MAX]; + char name2[ATTR_NAME_MAX]; + int cmp; + unsigned i; + herr_t ret_value = SUCCEED; + + + H5TOOLS_DEBUG("build_match_list_attrs start - errstat:%d", opts->err_stat); + + if(H5Oget_info2(loc1_id, &oinfo1, H5O_INFO_NUM_ATTRS) < 0) { + H5TOOLS_GOTO_ERROR(FAIL, "H5Oget_info first object failed"); + } + H5TOOLS_DEBUG("H5Oget_info2 loc1id=%d", oinfo1.num_attrs); + if(H5Oget_info2(loc2_id, &oinfo2, H5O_INFO_NUM_ATTRS) < 0) { + H5TOOLS_GOTO_ERROR(FAIL, "H5Oget_info second object failed"); + } + H5TOOLS_DEBUG("H5Oget_info2 loc2id=%d", oinfo2.num_attrs); table_attrs_init(&table_lp); if (table_lp == NULL) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "Table allocation failed"); + H5TOOLS_GOTO_ERROR(FAIL, "Table allocation failed"); /*-------------------------------------------------- * build the list */ while(curr1 < oinfo1.num_attrs && curr2 < oinfo2.num_attrs) { - h5diffdebug3("build_match_list_attrs 1: %ld - %ld\n", curr1, oinfo1.num_attrs); - h5diffdebug3("build_match_list_attrs 2: %ld - %ld\n", curr2, oinfo2.num_attrs); + H5TOOLS_DEBUG("build_match_list_attrs 1: %ld - %ld", curr1, oinfo1.num_attrs); + H5TOOLS_DEBUG("build_match_list_attrs 2: %ld - %ld", curr2, oinfo2.num_attrs); /*------------------ * open attribute1 */ if((attr1_id = H5Aopen_by_idx(loc1_id, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)curr1, H5P_DEFAULT, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aopen_by_idx first attribute failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Aopen_by_idx first attribute failed"); /* get name */ if(H5Aget_name(attr1_id, (size_t)ATTR_NAME_MAX, name1) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aget_name first attribute failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Aget_name first attribute failed"); /*------------------ * open attribute2 */ if((attr2_id = H5Aopen_by_idx(loc2_id, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)curr2, H5P_DEFAULT, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aopen_by_idx second attribute failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Aopen_by_idx second attribute failed"); /* get name */ if(H5Aget_name(attr2_id, (size_t)ATTR_NAME_MAX, name2) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aget_name second attribute failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Aget_name second attribute failed"); /* criteria is string compare */ cmp = HDstrcmp(name1, name2); @@ -213,25 +218,25 @@ static herr_t build_match_list_attrs(hid_t loc1_id, hid_t loc2_id, table_attrs_t /* close for next turn */ H5Aclose(attr1_id); - attr1_id = -1; + attr1_id = H5I_INVALID_HID; H5Aclose(attr2_id); - attr2_id = -1; + attr2_id = H5I_INVALID_HID; } /* end while */ /* list1 did not end */ infile[0] = 1; infile[1] = 0; while(curr1 < oinfo1.num_attrs) { - h5diffdebug3("build_match_list_attrs 1: %ld - %ld\n", curr1, oinfo1.num_attrs); + H5TOOLS_DEBUG("build_match_list_attrs 1: %ld - %ld", curr1, oinfo1.num_attrs); /*------------------ * open attribute1 */ if((attr1_id = H5Aopen_by_idx(loc1_id, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)curr1, H5P_DEFAULT, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aopen_by_idx first attribute failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Aopen_by_idx first attribute failed"); /* get name */ if(H5Aget_name(attr1_id, (size_t)ATTR_NAME_MAX, name1) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aget_name first attribute failed"); - h5diffdebug2("build_match_list_attrs #1 name - %s\n", name1); + H5TOOLS_GOTO_ERROR(FAIL, "H5Aget_name first attribute failed"); + H5TOOLS_DEBUG("build_match_list_attrs #1 name - %s", name1); table_attr_mark_exist(infile, name1, table_lp); table_lp->nattrs_only1++; @@ -239,22 +244,22 @@ static herr_t build_match_list_attrs(hid_t loc1_id, hid_t loc2_id, table_attrs_t /* close for next turn */ H5Aclose(attr1_id); - attr1_id = -1; + attr1_id = H5I_INVALID_HID; } /* list2 did not end */ infile[0] = 0; infile[1] = 1; while(curr2 < oinfo2.num_attrs) { - h5diffdebug3("build_match_list_attrs 2: %ld - %ld\n", curr2, oinfo2.num_attrs); + H5TOOLS_DEBUG("build_match_list_attrs 2: %ld - %ld", curr2, oinfo2.num_attrs); /*------------------ * open attribute2 */ if((attr2_id = H5Aopen_by_idx(loc2_id, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)curr2, H5P_DEFAULT, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aopen_by_idx second attribute failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Aopen_by_idx second attribute failed"); /* get name */ if(H5Aget_name(attr2_id, (size_t)ATTR_NAME_MAX, name2) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aget_name second attribute failed"); - h5diffdebug2("build_match_list_attrs #2 name - %s\n", name2); + H5TOOLS_GOTO_ERROR(FAIL, "H5Aget_name second attribute failed"); + H5TOOLS_DEBUG("build_match_list_attrs #2 name - %s", name2); table_attr_mark_exist(infile, name2, table_lp); table_lp->nattrs_only2++; @@ -262,7 +267,7 @@ static herr_t build_match_list_attrs(hid_t loc1_id, hid_t loc2_id, table_attrs_t /* close for next turn */ H5Aclose(attr2_id); - attr2_id = -1; + attr2_id = H5I_INVALID_HID; } /*------------------------------------------------------ @@ -273,7 +278,7 @@ static herr_t build_match_list_attrs(hid_t loc1_id, hid_t loc2_id, table_attrs_t parallel_print(" obj1 obj2\n"); parallel_print(" --------------------------------------\n"); for(i = 0; i < (unsigned int) table_lp->nattrs; i++) { - char c1, c2; + int c1, c2; c1 = (table_lp->attrs[i].exist[0]) ? 'x' : ' '; c2 = (table_lp->attrs[i].exist[1]) ? 'x' : ' '; parallel_print("%5c %6c %-15s\n", c1, c2, table_lp->attrs[i].name); @@ -294,43 +299,34 @@ done: H5Aclose(attr2_id); } H5E_END_TRY; - h5diffdebug2("build_match_list_attrs end - errstat:%d\n", opts->err_stat); + H5TOOLS_DEBUG("build_match_list_attrs end - errstat:%d", opts->err_stat); + H5TOOLS_ENDDEBUG("exit"); return ret_value; } /*------------------------------------------------------------------------- - * Function: diff_attr + * Function: diff_attr_data * - * Purpose: compare attributes located in LOC1_ID and LOC2_ID, which are - * obtained either from - * loc_id = H5Gopen2(fid, name, H5P_DEFAULT); - * loc_id = H5Dopen2(fid, name); - * loc_id = H5Topen2(fid, name, H5P_DEFAULT); + * Purpose: compare attribute data located in attr1_id and attr2_id, which are + * obtained from open attributes * * Return: number of differences found *------------------------------------------------------------------------- */ -hsize_t diff_attr(hid_t loc1_id, - hid_t loc2_id, - const char *path1, - const char *path2, - diff_opt_t *opts) +hsize_t diff_attr_data(hid_t attr1_id, hid_t attr2_id, const char *name1, const char *name2, const char *path1, const char *path2, diff_opt_t *opts) { - int ret_value = opts->err_stat; - hid_t attr1_id = -1; /* attr ID */ - hid_t attr2_id = -1; /* attr ID */ - hid_t space1_id = -1; /* space ID */ - hid_t space2_id = -1; /* space ID */ - hid_t ftype1_id = -1; /* file data type ID */ - hid_t ftype2_id = -1; /* file data type ID */ - hid_t mtype1_id = -1; /* memory data type ID */ - hid_t mtype2_id = -1; /* memory data type ID */ + hid_t space1_id = H5I_INVALID_HID; /* space ID */ + hid_t space2_id = H5I_INVALID_HID; /* space ID */ + hid_t ftype1_id = H5I_INVALID_HID; /* file data type ID */ + hid_t ftype2_id = H5I_INVALID_HID; /* file data type ID */ + hid_t mtype1_id = H5I_INVALID_HID; /* memory data type ID */ + hid_t mtype2_id = H5I_INVALID_HID; /* memory data type ID */ size_t msize1; /* memory size of memory type */ size_t msize2; /* memory size of memory type */ - void *buf1 = NULL; /* data buffer */ - void *buf2 = NULL; /* data buffer */ + void *buf1 = NULL; /* data buffer */ + void *buf2 = NULL; /* data buffer */ hbool_t buf1hasdata = FALSE; /* buffer has data */ hbool_t buf2hasdata = FALSE; /* buffer has data */ hsize_t nelmts1; /* number of elements in dataset */ @@ -338,208 +334,258 @@ hsize_t diff_attr(hid_t loc1_id, int rank2; /* rank of dataset */ hsize_t dims1[H5S_MAX_RANK]; /* dimensions of dataset */ hsize_t dims2[H5S_MAX_RANK]; /* dimensions of dataset */ - char *name1 = NULL; - char *name2 = NULL; char np1[512]; char np2[512]; unsigned u; /* Local index variable */ hsize_t nfound = 0; - hsize_t nfound_total = 0; - int j; + int j; + diff_err_t ret_value = opts->err_stat; + + H5TOOLS_DEBUG("diff_attr_data start - errstat:%d", opts->err_stat); + + /* get the datatypes */ + if((ftype1_id = H5Aget_type(attr1_id)) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type first attribute failed"); + if((ftype2_id = H5Aget_type(attr2_id)) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type second attribute failed"); + + if (H5Tget_class(ftype1_id) == H5T_REFERENCE) { + if((mtype1_id = H5Tcopy(H5T_STD_REF)) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tcopy(H5T_STD_REF) first attribute ftype failed"); + } + else { + if((mtype1_id = H5Tget_native_type(ftype1_id, H5T_DIR_DEFAULT)) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tget_native_type first attribute ftype failed"); + } + if (H5Tget_class(ftype2_id) == H5T_REFERENCE) { + if((mtype2_id = H5Tcopy(H5T_STD_REF)) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tcopy(H5T_STD_REF) second attribute ftype failed"); + } + else { + if((mtype2_id = H5Tget_native_type(ftype2_id, H5T_DIR_DEFAULT)) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tget_native_type second attribute ftype failed"); + } + if((msize1 = H5Tget_size(mtype1_id)) == 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tget_size first attribute mtype failed"); + if((msize2 = H5Tget_size(mtype2_id)) == 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tget_size second attribute mtype failed"); + + /* get the dataspace */ + if((space1_id = H5Aget_space(attr1_id)) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_space first attribute failed"); + if((space2_id = H5Aget_space(attr2_id)) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_space second attribute failed"); + + /* get dimensions */ + if((rank1 = H5Sget_simple_extent_dims(space1_id, dims1, NULL)) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sget_simple_extent_dims first attribute failed"); + if((rank2 = H5Sget_simple_extent_dims(space2_id, dims2, NULL)) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sget_simple_extent_dims second attribute failed"); + + /*---------------------------------------------------------------------- + * check for comparable TYPE and SPACE + *---------------------------------------------------------------------- + */ + H5TOOLS_DEBUG("diff_attr_data check for comparable TYPE and SPACE"); + + /* pass dims1 and dims2 for maxdims as well since attribute's maxdims + * are always same */ + if(diff_can_type(ftype1_id, ftype2_id, rank1, rank2, dims1, dims2, dims1, dims2, name1, name2, opts, 0) == 1) { + /*----------------------------------------------------------------- + * "upgrade" the smaller memory size + *------------------------------------------------------------------ + */ + if(FAIL == match_up_memsize(ftype1_id, ftype2_id, &mtype1_id, &mtype2_id, &msize1, &msize2)) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "match_up_memsize failed"); + + H5TOOLS_DEBUG("diff_attr_data read"); + /*--------------------------------------------------------------------- + * read + *---------------------------------------------------------------------- + */ + nelmts1 = 1; + for(j = 0; j < rank1; j++) + nelmts1 *= dims1[j]; + + buf1 = (void *)HDcalloc((size_t)(nelmts1), msize1); + buf2 = (void *)HDcalloc((size_t)(nelmts1), msize2); + if(buf1 == NULL || buf2 == NULL) { + parallel_print("cannot read into memory\n"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "buffer allocation failed"); + } + if(H5Aread(attr1_id, mtype1_id, buf1) < 0) { + parallel_print("Failed reading attribute1 %s\n", name1); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type first attribute failed"); + } + else + buf1hasdata = TRUE; + + if(H5Aread(attr2_id, mtype2_id, buf2) < 0) { + parallel_print("Failed reading attribute2 %s\n", name2); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type second attribute failed"); + } + else + buf2hasdata = TRUE; + + /* format output string */ + HDsnprintf(np1, sizeof(np1), "%s of <%s>", name1, path1); + HDsnprintf(np2, sizeof(np1), "%s of <%s>", name2, path2); + + /*--------------------------------------------------------------------- + * array compare + *---------------------------------------------------------------------- + */ + H5TOOLS_DEBUG("diff_attr_data array compare %s - %s", name1, name1); + + /* always print name */ + /* verbose (-v) and report (-r) mode */ + if(opts->m_verbose || opts->m_report) { + do_print_attrname("attribute", np1, np2); + + nfound = diff_array(buf1, buf2, nelmts1, (hsize_t) 0, rank1, + dims1, opts, np1, np2, mtype1_id, attr1_id, attr2_id); + print_found(nfound); + } + /* quiet mode (-q), just count differences */ + else if(opts->m_quiet) { + nfound = diff_array(buf1, buf2, nelmts1, (hsize_t) 0, rank1, + dims1, opts, np1, np2, mtype1_id, attr1_id, attr2_id); + } + /* the rest (-c, none, ...) */ + else { + nfound = diff_array(buf1, buf2, nelmts1, (hsize_t) 0, rank1, + dims1, opts, np1, np2, mtype1_id, attr1_id, attr2_id); + /* print info if compatible and difference found */ + if (nfound) { + do_print_attrname("attribute", np1, np2); + print_found(nfound); + } /* end if */ + } /* end else */ + } + H5TOOLS_DEBUG("diff_attr_data check for comparable TYPE and SPACE complete nfound:%d - errstat:%d", nfound, opts->err_stat); + + /*---------------------------------------------------------------------- + * close + *---------------------------------------------------------------------- + */ + + /* Free buf1 and buf2, check both VLEN-data VLEN-string to reclaim any + * VLEN memory first */ + if(TRUE == h5tools_detect_vlen(mtype1_id)) + H5Treclaim(mtype1_id, space1_id, H5P_DEFAULT, buf1); + HDfree(buf1); + buf1 = NULL; + + if(TRUE == h5tools_detect_vlen(mtype2_id)) + H5Treclaim(mtype2_id, space2_id, H5P_DEFAULT, buf2); + HDfree(buf2); + buf2 = NULL; + + if(H5Tclose(ftype1_id) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type first attribute failed"); + if(H5Tclose(ftype2_id) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type second attribute failed"); + if(H5Sclose(space1_id) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type first attribute failed"); + if(H5Sclose(space2_id) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type second attribute failed"); + if(H5Tclose(mtype1_id) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tclose first attribute mtype failed"); + if(H5Tclose(mtype2_id) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tclose second attribute mtype failed"); + +done: + opts->err_stat = opts->err_stat | ret_value; + + H5E_BEGIN_TRY { + if(buf1) { + if(buf1hasdata && TRUE == h5tools_detect_vlen(mtype1_id)) + H5Treclaim(mtype1_id, space1_id, H5P_DEFAULT, buf1); + HDfree(buf1); + } /* end if */ + if(buf2) { + if(buf2hasdata && TRUE == h5tools_detect_vlen(mtype2_id)) + H5Treclaim(mtype2_id, space2_id, H5P_DEFAULT, buf2); + HDfree(buf2); + } /* end if */ + + H5Tclose(ftype1_id); + H5Tclose(ftype2_id); + H5Tclose(mtype1_id); + H5Tclose(mtype2_id); + H5Sclose(space1_id); + H5Sclose(space2_id); + } H5E_END_TRY; + + H5TOOLS_DEBUG("diff_attr_data end - errstat:%d", opts->err_stat); + + H5TOOLS_ENDDEBUG("exit"); + return nfound; +} + +/*------------------------------------------------------------------------- + * Function: diff_attr + * + * Purpose: compare attributes located in LOC1_ID and LOC2_ID, which are + * obtained either from + * loc_id = H5Gopen2(fid, name, H5P_DEFAULT); + * loc_id = H5Dopen2(fid, name); + * loc_id = H5Topen2(fid, name, H5P_DEFAULT); + * + * Return: number of differences found + *------------------------------------------------------------------------- + */ + +hsize_t diff_attr(hid_t loc1_id, hid_t loc2_id, const char *path1, const char *path2, diff_opt_t *opts) +{ table_attrs_t *match_list_attrs = NULL; - h5difftrace("diff_attr start\n"); + hid_t attr1_id = H5I_INVALID_HID; /* attr ID */ + hid_t attr2_id = H5I_INVALID_HID; /* attr ID */ + char *name1 = NULL; + char *name2 = NULL; + unsigned u; /* Local index variable */ + hsize_t nfound = 0; + hsize_t nfound_total = 0; + diff_err_t ret_value = opts->err_stat; + + H5TOOLS_DEBUG("diff_attr start - errstat:%d", opts->err_stat); if(build_match_list_attrs(loc1_id, loc2_id, &match_list_attrs, opts) < 0) { - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "build_match_list_attrs failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "build_match_list_attrs failed"); } - h5diffdebug2("build_match_list_attrs - errstat:%d\n", opts->err_stat); + H5TOOLS_DEBUG("build_match_list_attrs - errstat:%d", opts->err_stat); /* if detect any unique extra attr */ if(match_list_attrs->nattrs_only1 || match_list_attrs->nattrs_only2) { - h5difftrace("diff_attr attributes only in one file\n"); + H5TOOLS_DEBUG("diff_attr attributes only in one file"); /* exit will be 1 */ opts->contents = 0; } - h5diffdebug2("match_list_attrs info - errstat:%d\n", opts->err_stat); + H5TOOLS_DEBUG("match_list_attrs info - errstat:%d", opts->err_stat); for(u = 0; u < (unsigned)match_list_attrs->nattrs; u++) { - h5diffdebug3("match_list_attrs loop[%d] - errstat:%d\n", u, opts->err_stat); + H5TOOLS_DEBUG("match_list_attrs loop[%d] - errstat:%d", u, opts->err_stat); if((match_list_attrs->attrs[u].exist[0]) && (match_list_attrs->attrs[u].exist[1])) { name1 = name2 = match_list_attrs->attrs[u].name; - h5diffdebug2("diff_attr name - %s\n", name1); + H5TOOLS_DEBUG("diff_attr name - %s", name1); /*-------------- * attribute 1 */ if((attr1_id = H5Aopen(loc1_id, name1, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Aopen first attribute failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aopen first attribute failed"); /*-------------- * attribute 2 */ if((attr2_id = H5Aopen(loc2_id, name2, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Aopen second attribute failed"); - - h5difftrace("diff_attr got attributes\n"); - /* get the datatypes */ - if((ftype1_id = H5Aget_type(attr1_id)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Aget_type first attribute failed"); - if((ftype2_id = H5Aget_type(attr2_id)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Aget_type second attribute failed"); - - if((mtype1_id = H5Tget_native_type(ftype1_id, H5T_DIR_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Tget_native_type first attribute ftype failed"); - if((mtype2_id = H5Tget_native_type(ftype2_id, H5T_DIR_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Tget_native_type second attribute ftype failed"); - if((msize1 = H5Tget_size(mtype1_id)) == 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Tget_size first attribute mtype failed"); - if((msize2 = H5Tget_size(mtype2_id)) == 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Tget_size second attribute mtype failed"); - - /* get the dataspace */ - if((space1_id = H5Aget_space(attr1_id)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Aget_space first attribute failed"); - if((space2_id = H5Aget_space(attr2_id)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Aget_space second attribute failed"); - - /* get dimensions */ - if((rank1 = H5Sget_simple_extent_dims(space1_id, dims1, NULL)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Sget_simple_extent_dims first attribute failed"); - if((rank2 = H5Sget_simple_extent_dims(space2_id, dims2, NULL)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Sget_simple_extent_dims second attribute failed"); - - /*---------------------------------------------------------------------- - * check for comparable TYPE and SPACE - *---------------------------------------------------------------------- - */ - - /* pass dims1 and dims2 for maxdims as well since attribute's maxdims - * are always same */ - if(diff_can_type(ftype1_id, ftype2_id, rank1, rank2, dims1, dims2, - dims1, dims2, name1, name2, opts, 0) != 1) { - if(H5Tclose(ftype1_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Tclose first attribute ftype failed"); - if(H5Tclose(ftype2_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Tclose second attribute ftype failed"); - if(H5Sclose(space1_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Sclose first attribute failed"); - if(H5Sclose(space2_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Sclose second attribute failed"); - if(H5Aclose(attr1_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Aclose first attribute failed"); - if(H5Aclose(attr2_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Aclose second attribute failed"); - if(H5Tclose(mtype1_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Tclose first attribute mtype failed"); - if(H5Tclose(mtype2_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Tclose second attribute mtype failed"); - - continue; - } - - /*----------------------------------------------------------------- - * "upgrade" the smaller memory size - *------------------------------------------------------------------ - */ - if(FAIL == match_up_memsize(ftype1_id, ftype2_id, &mtype1_id, - &mtype2_id, &msize1, &msize2)) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "match_up_memsize failed"); - - /*--------------------------------------------------------------------- - * read - *---------------------------------------------------------------------- - */ - nelmts1 = 1; - for(j = 0; j < rank1; j++) - nelmts1 *= dims1[j]; - - buf1 = (void *)HDcalloc((size_t)(nelmts1), msize1); - buf2 = (void *)HDcalloc((size_t)(nelmts1), msize2); - if(buf1 == NULL || buf2 == NULL) { - parallel_print("cannot read into memory\n"); - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "buffer allocation failed"); - } - if(H5Aread(attr1_id, mtype1_id, buf1) < 0) { - parallel_print("Failed reading attribute1 %s/%s\n", path1, name1); - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Aget_type first attribute failed"); - } - else - buf1hasdata = TRUE; - - if(H5Aread(attr2_id, mtype2_id, buf2) < 0) { - parallel_print("Failed reading attribute2 %s/%s\n", path2, name2); - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Aget_type second attribute failed"); - } - else - buf2hasdata = TRUE; - - /* format output string */ - HDsnprintf(np1, sizeof(np1), "%s of <%s>", name1, path1); - HDsnprintf(np2, sizeof(np1), "%s of <%s>", name2, path2); - - /*--------------------------------------------------------------------- - * array compare - *---------------------------------------------------------------------- - */ - - /* always print name */ - /* verbose (-v) and report (-r) mode */ - if(opts->m_verbose || opts->m_report) { - do_print_attrname("attribute", np1, np2); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aopen second attribute failed"); - nfound = diff_array(buf1, buf2, nelmts1, (hsize_t) 0, rank1, - dims1, opts, np1, np2, mtype1_id, attr1_id, attr2_id); - print_found(nfound); - } - /* quiet mode (-q), just count differences */ - else if(opts->m_quiet) { - nfound = diff_array(buf1, buf2, nelmts1, (hsize_t) 0, rank1, - dims1, opts, np1, np2, mtype1_id, attr1_id, attr2_id); - } - /* the rest (-c, none, ...) */ - else { - nfound = diff_array(buf1, buf2, nelmts1, (hsize_t) 0, rank1, - dims1, opts, np1, np2, mtype1_id, attr1_id, attr2_id); - - /* print info if compatible and difference found */ - if (nfound) { - do_print_attrname("attribute", np1, np2); - print_found(nfound); - } /* end if */ - } /* end else */ - - /*---------------------------------------------------------------------- - * close - *---------------------------------------------------------------------- - */ - - /* Free buf1 and buf2, check both VLEN-data VLEN-string to reclaim any - * VLEN memory first */ - if(TRUE == h5tools_detect_vlen(mtype1_id)) - H5Treclaim(mtype1_id, space1_id, H5P_DEFAULT, buf1); - HDfree(buf1); - buf1 = NULL; - - if(TRUE == h5tools_detect_vlen(mtype2_id)) - H5Treclaim(mtype2_id, space2_id, H5P_DEFAULT, buf2); - HDfree(buf2); - buf2 = NULL; - - if(H5Tclose(ftype1_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Aget_type first attribute failed"); - if(H5Tclose(ftype2_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Aget_type second attribute failed"); - if(H5Sclose(space1_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Aget_type first attribute failed"); - if(H5Sclose(space2_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Aget_type second attribute failed"); + H5TOOLS_DEBUG("diff_attr got attributes"); + nfound = diff_attr_data(attr1_id, attr2_id, name1, name2, path1, path2, opts); if(H5Aclose(attr1_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Aget_type first attribute failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type first attribute failed"); if(H5Aclose(attr2_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Aget_type second attribute failed"); - if(H5Tclose(mtype1_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Tclose first attribute mtype failed"); - if(H5Tclose(mtype2_id) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Tclose second attribute mtype failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type second attribute failed"); nfound_total += nfound; } @@ -549,30 +595,14 @@ done: opts->err_stat = opts->err_stat | ret_value; H5E_BEGIN_TRY { - if(buf1) { - if(buf1hasdata && TRUE == h5tools_detect_vlen(mtype1_id)) - H5Treclaim(mtype1_id, space1_id, H5P_DEFAULT, buf1); - HDfree(buf1); - } /* end if */ - if(buf2) { - if(buf2hasdata && TRUE == h5tools_detect_vlen(mtype2_id)) - H5Treclaim(mtype2_id, space2_id, H5P_DEFAULT, buf2); - HDfree(buf2); - } /* end if */ - table_attrs_free(match_list_attrs); - H5Tclose(ftype1_id); - H5Tclose(ftype2_id); - H5Tclose(mtype1_id); - H5Tclose(mtype2_id); - H5Sclose(space1_id); - H5Sclose(space2_id); H5Aclose(attr1_id); H5Aclose(attr2_id); } H5E_END_TRY; - h5diffdebug2("diff_attr end - errstat:%d\n", opts->err_stat); + H5TOOLS_DEBUG("diff_attr end - errstat:%d", opts->err_stat); + H5TOOLS_ENDDEBUG("exit"); return nfound_total; } diff --git a/tools/lib/h5diff_dset.c b/tools/lib/h5diff_dset.c index 56c4f0b..f757f92 100644 --- a/tools/lib/h5diff_dset.c +++ b/tools/lib/h5diff_dset.c @@ -33,15 +33,15 @@ hsize_t diff_dataset(hid_t file1_id, const char *obj2_name, diff_opt_t *opts) { - int ret_value = opts->err_stat; - int status = -1; - hid_t did1 = -1; - hid_t did2 = -1; - hid_t dcpl1 = -1; - hid_t dcpl2 = -1; - hsize_t nfound = 0; - - h5difftrace("diff_dataset start\n"); + int status = -1; + hid_t did1 = H5I_INVALID_HID; + hid_t did2 = H5I_INVALID_HID; + hid_t dcpl1 = H5I_INVALID_HID; + hid_t dcpl2 = H5I_INVALID_HID; + hsize_t nfound = 0; + diff_err_t ret_value = opts->err_stat; + + H5TOOLS_DEBUG("diff_dataset start - errstat:%d", opts->err_stat); /*------------------------------------------------------------------------- * open the handles *------------------------------------------------------------------------- @@ -49,17 +49,17 @@ hsize_t diff_dataset(hid_t file1_id, /* Open the datasets */ if((did1 = H5Dopen2(file1_id, obj1_name, H5P_DEFAULT)) < 0) { parallel_print("Cannot open dataset <%s>\n", obj1_name); - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Dopen2 first dataset failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dopen2 first dataset failed"); } if((did2 = H5Dopen2(file2_id, obj2_name, H5P_DEFAULT)) < 0) { parallel_print("Cannot open dataset <%s>\n", obj2_name); - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Dopen2 second dataset failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dopen2 second dataset failed"); } if((dcpl1 = H5Dget_create_plist(did1)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Dget_create_plist first dataset failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dget_create_plist first dataset failed"); if((dcpl2 = H5Dget_create_plist(did2)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Dget_create_plist second dataset failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dget_create_plist second dataset failed"); /*------------------------------------------------------------------------- * check if the dataset creation property list has filters that @@ -68,11 +68,12 @@ hsize_t diff_dataset(hid_t file1_id, * 2) the internal filters might be turned off *------------------------------------------------------------------------- */ + H5TOOLS_DEBUG("diff_dataset h5tools_canreadf then diff_datasetid"); if ((status = h5tools_canreadf((opts->m_verbose ? obj1_name : NULL), dcpl1) == 1) && (status = h5tools_canreadf((opts->m_verbose ? obj2_name : NULL), dcpl2) == 1)) nfound = diff_datasetid(did1, did2, obj1_name, obj2_name, opts); else if (status < 0) { - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "h5tools_canreadf failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "h5tools_canreadf failed"); } else { ret_value = 1; @@ -91,7 +92,8 @@ done: /* enable error reporting */ } H5E_END_TRY; - h5diffdebug3("diff_dataset finish:%d - errstat:%d\n", nfound, opts->err_stat); + H5TOOLS_DEBUG("diff_dataset finish:%d - errstat:%d", nfound, opts->err_stat); + H5TOOLS_ENDDEBUG("exit"); return nfound; } @@ -152,16 +154,15 @@ hsize_t diff_datasetid(hid_t did1, const char *obj2_name, diff_opt_t *opts) { - int ret_value = opts->err_stat; - hid_t sid1 = -1; - hid_t sid2 = -1; - hid_t f_tid1 = -1; - hid_t f_tid2 = -1; - hid_t dam_tid = -1; /* m_tid for diff_array function */ - hid_t m_tid1 = -1; - hid_t m_tid2 = -1; - hid_t dcpl1 = -1; - hid_t dcpl2 = -1; + hid_t sid1 = H5I_INVALID_HID; + hid_t sid2 = H5I_INVALID_HID; + hid_t f_tid1 = H5I_INVALID_HID; + hid_t f_tid2 = H5I_INVALID_HID; + hid_t dam_tid = H5I_INVALID_HID; /* m_tid for diff_array function */ + hid_t m_tid1 = H5I_INVALID_HID; + hid_t m_tid2 = H5I_INVALID_HID; + hid_t dcpl1 = H5I_INVALID_HID; + hid_t dcpl2 = H5I_INVALID_HID; H5D_layout_t stl1 = -1; H5D_layout_t stl2 = -1; size_t dam_size; /* m_size for diff_array function */ @@ -189,37 +190,38 @@ hsize_t diff_datasetid(hid_t did1, void *buf2 = NULL; void *sm_buf1 = NULL; void *sm_buf2 = NULL; - hid_t sm_space = -1; /*stripmine data space */ + hid_t sm_space = H5I_INVALID_HID; /*stripmine data space */ size_t need; /* bytes needed for malloc */ int i; unsigned int vl_data1 = 0; /*contains VL datatypes */ unsigned int vl_data2 = 0; /*contains VL datatypes */ + diff_err_t ret_value = opts->err_stat; - h5difftrace("diff_datasetid start\n"); + H5TOOLS_DEBUG("diff_datasetid start - errstat:%d", opts->err_stat); /* Get the dataspace handle */ if((sid1 = H5Dget_space(did1)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Dget_space failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dget_space failed"); /* Get rank */ if((rank1 = H5Sget_simple_extent_ndims(sid1)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Sget_simple_extent_ndims failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sget_simple_extent_ndims failed"); /* Get the dataspace handle */ if((sid2 = H5Dget_space(did2)) < 0 ) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Dget_space failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dget_space failed"); /* Get rank */ if((rank2 = H5Sget_simple_extent_ndims(sid2)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Sget_simple_extent_ndims failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sget_simple_extent_ndims failed"); /* Get dimensions */ if(H5Sget_simple_extent_dims(sid1, dims1, maxdim1) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Sget_simple_extent_dims failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sget_simple_extent_dims failed"); /* Get dimensions */ if(H5Sget_simple_extent_dims(sid2, dims2, maxdim2) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sget_simple_extent_dims failed"); - h5diffdebug3("rank: %ld - %ld\n", rank1, rank2); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sget_simple_extent_dims failed"); + H5TOOLS_DEBUG("rank: %ld - %ld", rank1, rank2); /*------------------------------------------------------------------------- * get the file data type @@ -228,35 +230,35 @@ hsize_t diff_datasetid(hid_t did1, /* Get the data type */ if((f_tid1 = H5Dget_type(did1)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Dget_type failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dget_type failed"); /* Get the data type */ if((f_tid2 = H5Dget_type(did2)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Dget_type failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dget_type failed"); /*------------------------------------------------------------------------- * get the storage layout type *------------------------------------------------------------------------- */ if((dcpl1 = H5Dget_create_plist(did1)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Dget_create_plist failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dget_create_plist failed"); if((dcpl2 = H5Dget_create_plist(did2)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Dget_create_plist failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dget_create_plist failed"); if((stl1 = H5Pget_layout(dcpl1)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Pget_layout failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Pget_layout failed"); if((stl2 = H5Pget_layout(dcpl2)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Pget_layout failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Pget_layout failed"); /*------------------------------------------------------------------------- * check for empty datasets *------------------------------------------------------------------------- */ - h5difftrace("check for empty datasets\n"); + H5TOOLS_DEBUG("check for empty datasets"); storage_size1 = H5Dget_storage_size(did1); storage_size2 = H5Dget_storage_size(did2); - h5diffdebug3("storage size: %ld - %ld\n", storage_size1, storage_size2); + H5TOOLS_DEBUG("storage size: %ld - %ld", storage_size1, storage_size2); if(storage_size1 == 0 || storage_size2 == 0) { if(stl1 == H5D_VIRTUAL || stl2 == H5D_VIRTUAL) { @@ -280,33 +282,45 @@ hsize_t diff_datasetid(hid_t did1, obj1_name, obj2_name, opts, 0) != 1) can_compare = 0; - h5diffdebug2("diff_can_type - errstat:%d\n", opts->err_stat); + H5TOOLS_DEBUG("diff_can_type - errstat:%d", opts->err_stat); /*------------------------------------------------------------------------- * memory type and sizes *------------------------------------------------------------------------- */ - h5difftrace("check for memory type and sizes\n"); - if((m_tid1 = H5Tget_native_type(f_tid1, H5T_DIR_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Tget_native_type failed"); + H5TOOLS_DEBUG("check for memory type and sizes"); + if (H5Tget_class(f_tid1) == H5T_REFERENCE) { + if((m_tid1 = H5Tcopy(H5T_STD_REF)) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tcopy(H5T_STD_REF) first ftype failed"); + } + else { + if((m_tid1 = H5Tget_native_type(f_tid1, H5T_DIR_DEFAULT)) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tget_native_type first ftype failed"); + } - if((m_tid2 = H5Tget_native_type(f_tid2, H5T_DIR_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Tget_native_type failed"); + if (H5Tget_class(f_tid2) == H5T_REFERENCE) { + if((m_tid2 = H5Tcopy(H5T_STD_REF)) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tcopy(H5T_STD_REF) second ftype failed"); + } + else { + if((m_tid2 = H5Tget_native_type(f_tid2, H5T_DIR_DEFAULT)) < 0) + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tget_native_type second ftype failed"); + } m_size1 = H5Tget_size(m_tid1); m_size2 = H5Tget_size(m_tid2); - h5diffdebug3("type size: %ld - %ld\n", m_size1, m_size2); + H5TOOLS_DEBUG("type size: %ld - %ld", m_size1, m_size2); /*------------------------------------------------------------------------- * check for different signed/unsigned types *------------------------------------------------------------------------- */ if(can_compare) { - h5difftrace("can_compare for sign\n"); + H5TOOLS_DEBUG("can_compare for sign"); sign1 = H5Tget_sign(m_tid1); sign2 = H5Tget_sign(m_tid2); if(sign1 != sign2) { - h5difftrace("sign1 != sign2\n"); + H5TOOLS_DEBUG("sign1 != sign2"); if((opts->m_verbose || opts->m_list_not_cmp) && obj1_name && obj2_name) { parallel_print("Not comparable: <%s> has sign %s ", obj1_name, get_sign(sign1)); parallel_print("and <%s> has sign %s\n", obj2_name, get_sign(sign2)); @@ -315,6 +329,7 @@ hsize_t diff_datasetid(hid_t did1, can_compare = 0; opts->not_cmp = 1; } + H5TOOLS_DEBUG("can_compare for sign - can_compare=%d opts->not_cmp=%d", can_compare, opts->not_cmp); } /* Check if type is either VLEN-data or VLEN-string to reclaim any @@ -324,7 +339,7 @@ hsize_t diff_datasetid(hid_t did1, vl_data1 = TRUE; if(TRUE == h5tools_detect_vlen(m_tid2)) vl_data2 = TRUE; - h5diffdebug2("h5tools_detect_vlen - errstat:%d\n", opts->err_stat); + H5TOOLS_DEBUG("h5tools_detect_vlen %d:%d - errstat:%d", vl_data1, vl_data2, opts->err_stat); /*------------------------------------------------------------------------ * only attempt to compare if possible @@ -332,7 +347,7 @@ hsize_t diff_datasetid(hid_t did1, */ if(can_compare) { /* it is possible to compare */ H5T_class_t tclass = H5Tget_class(f_tid1); - h5difftrace("can_compare attempt\n"); + H5TOOLS_DEBUG("can_compare attempt"); /*----------------------------------------------------------------- * get number of elements @@ -346,19 +361,19 @@ hsize_t diff_datasetid(hid_t did1, for(i = 0; i < rank2; i++) nelmts2 *= dims2[i]; - h5diffdebug3("nelmts: %ld - %ld\n", nelmts1, nelmts2); + H5TOOLS_DEBUG("nelmts: %ld - %ld", nelmts1, nelmts2); if(tclass != H5T_ARRAY) { /*----------------------------------------------------------------- * "upgrade" the smaller memory size *------------------------------------------------------------------ */ - h5difftrace("upgrade the smaller memory size?\n"); + H5TOOLS_DEBUG("NOT H5T_ARRAY, upgrade the smaller memory size?"); if (FAIL == match_up_memsize (f_tid1, f_tid2, &m_tid1, &m_tid2, &m_size1, &m_size2)) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "match_up_memsize failed"); - h5diffdebug3("m_size: %ld - %ld\n", m_size1, m_size2); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "match_up_memsize failed"); + H5TOOLS_DEBUG("m_size: %ld - %ld", m_size1, m_size2); dadims = dims1; dam_size = m_size1; dam_tid = m_tid1; @@ -366,7 +381,7 @@ hsize_t diff_datasetid(hid_t did1, need = (size_t)(nelmts1 * m_size1); /* bytes needed */ } else { - h5diffdebug3("Array dims: %d - %d\n", dims1[0], dims2[0]); + H5TOOLS_DEBUG("Array dims: %d - %d", dims1[0], dims2[0]); /* Compare the smallest array, but create the largest buffer */ if(m_size1 <= m_size2) { dadims = dims1; @@ -388,9 +403,10 @@ hsize_t diff_datasetid(hid_t did1, name1 = diff_basename(obj1_name); if(obj2_name) name2 = diff_basename(obj2_name); - h5diffdebug3("obj_names: %s - %s\n", name1, name2); + H5TOOLS_DEBUG("obj_names: %s - %s", name1, name2); + H5TOOLS_DEBUG("read/compare"); /*---------------------------------------------------------------- * read/compare *----------------------------------------------------------------- @@ -401,23 +417,24 @@ hsize_t diff_datasetid(hid_t did1, } /* end if */ if(buf1 != NULL && buf2 != NULL) { - h5difftrace("buf1 != NULL && buf2 != NULL\n"); + H5TOOLS_DEBUG("buf1 != NULL && buf2 != NULL"); + H5TOOLS_DEBUG("H5Dread did1"); if(H5Dread(did1, m_tid1, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf1) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Dread failed"); - h5difftrace("H5Dread did2\n"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dread failed"); + H5TOOLS_DEBUG("H5Dread did2"); if(H5Dread(did2, m_tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf2) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Dread failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dread failed"); /* array diff */ nfound = diff_array(buf1, buf2, danelmts, (hsize_t)0, rank1, dadims, opts, name1, name2, dam_tid, did1, did2); - h5diffdebug2("diff_array nfound:%d\n", nfound); + H5TOOLS_DEBUG("diff_array nfound:%d - errstat:%d", nfound, opts->err_stat); /* reclaim any VL memory, if necessary */ - h5diffdebug2("check vl_data1:%d\n", vl_data1); + H5TOOLS_DEBUG("check vl_data1:%d", vl_data1); if(vl_data1) H5Treclaim(m_tid1, sid1, H5P_DEFAULT, buf1); - h5diffdebug2("check vl_data2:%d\n", vl_data2); + H5TOOLS_DEBUG("check vl_data2:%d", vl_data2); if(vl_data2) H5Treclaim(m_tid2, sid2, H5P_DEFAULT, buf2); if(buf1 != NULL) { @@ -459,7 +476,7 @@ hsize_t diff_datasetid(hid_t did1, size = 1; sm_size[i - 1] = MIN(dadims[i - 1], size); sm_nbytes *= sm_size[i - 1]; - h5diffdebug2("sm_nbytes: %ld\n", sm_nbytes); + H5TOOLS_DEBUG("sm_nbytes: %ld", sm_nbytes); } /* end for */ /* malloc return code should be verified. @@ -470,9 +487,9 @@ hsize_t diff_datasetid(hid_t did1, * E.g., sm_space. */ if((sm_buf1 = HDmalloc((size_t)sm_nbytes)) == NULL) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "HDmalloc failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "HDmalloc failed"); if((sm_buf2 = HDmalloc((size_t)sm_nbytes)) == NULL) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "HDmalloc failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "HDmalloc failed"); sm_nelmts = sm_nbytes / p_type_nbytes; sm_space = H5Screate_simple(1, &sm_nelmts, NULL); @@ -489,19 +506,19 @@ hsize_t diff_datasetid(hid_t did1, hs_nelmts *= hs_size[i]; } /* end for */ if(H5Sselect_hyperslab(sid1, H5S_SELECT_SET, hs_offset, NULL, hs_size, NULL) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Sselect_hyperslab failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sselect_hyperslab failed"); if(H5Sselect_hyperslab(sid2, H5S_SELECT_SET, hs_offset, NULL, hs_size, NULL) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Sselect_hyperslab failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sselect_hyperslab failed"); if(H5Sselect_hyperslab(sm_space, H5S_SELECT_SET, zero, NULL, &hs_nelmts, NULL) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Sselect_hyperslab failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sselect_hyperslab failed"); } /* end if */ else hs_nelmts = 1; if(H5Dread(did1, m_tid1, sm_space, sid1, H5P_DEFAULT, sm_buf1) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Dread failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dread failed"); if(H5Dread(did2, m_tid2, sm_space, sid2, H5P_DEFAULT, sm_buf2) < 0) - H5TOOLS_GOTO_ERROR(1, H5E_tools_min_id_g, "H5Dread failed"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dread failed"); /* get array differences. in the case of hyperslab read, increment the number of differences found in each hyperslab and pass the position at the beginning for printing */ @@ -534,6 +551,7 @@ hsize_t diff_datasetid(hid_t did1, H5Sclose(sm_space); } /* hyperslab read */ + H5TOOLS_DEBUG("can_compare complete"); } /*can_compare*/ @@ -541,7 +559,7 @@ hsize_t diff_datasetid(hid_t did1, * close *------------------------------------------------------------------------- */ - h5diffdebug2("reclaim any VL memory - errstat:%d\n", opts->err_stat); + H5TOOLS_DEBUG("reclaim any VL memory - errstat:%d", opts->err_stat); done: opts->err_stat = opts->err_stat | ret_value; @@ -588,7 +606,8 @@ done: /* enable error reporting */ } H5E_END_TRY; - h5diffdebug3("diff_datasetid return:%d with nfound:%d\n", ret_value, nfound); + H5TOOLS_DEBUG("diff_datasetid return:%d with nfound:%d", ret_value, nfound); + H5TOOLS_ENDDEBUG("exit"); return nfound; } @@ -617,22 +636,22 @@ int diff_can_type(hid_t f_tid1, /* file data type */ diff_opt_t *opts, int is_compound) { - int ret_value = 1; /* can_compare value */ H5T_class_t tclass1; H5T_class_t tclass2; int maxdim_diff = 0; /* maximum dimensions are different */ int dim_diff = 0; /* current dimensions are different */ int i; + int ret_value = 1; - h5difftrace("diff_can_type start\n"); + H5TOOLS_DEBUG("diff_can_type start"); /*------------------------------------------------------------------------- * check for the same class *------------------------------------------------------------------------- */ if((tclass1 = H5Tget_class(f_tid1)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tget_class first object failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Tget_class first object failed"); if((tclass2 = H5Tget_class(f_tid2)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tget_class second object failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Tget_class second object failed"); if(tclass1 != tclass2) { if((opts->m_verbose || opts->m_list_not_cmp) && obj1_name && obj2_name) { @@ -648,7 +667,7 @@ int diff_can_type(hid_t f_tid1, /* file data type */ } } opts->not_cmp = 1; - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(0); } /*------------------------------------------------------------------------- @@ -662,7 +681,8 @@ int diff_can_type(hid_t f_tid1, /* file data type */ obj1_name, obj2_name, get_class(tclass2)); } /* end if */ opts->not_cmp = 1; - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(0); + break; case H5T_INTEGER: case H5T_FLOAT: @@ -677,7 +697,7 @@ int diff_can_type(hid_t f_tid1, /* file data type */ case H5T_NO_CLASS: case H5T_NCLASSES: default: - h5diffdebug2("diff_can_type class - %s\n", get_class(tclass1)); + H5TOOLS_DEBUG("diff_can_type class - %s", get_class(tclass1)); break; } /* end switch */ @@ -717,7 +737,7 @@ int diff_can_type(hid_t f_tid1, /* file data type */ parallel_print("\n"); } opts->not_cmp = 1; - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(0); } /*------------------------------------------------------------------------- @@ -753,7 +773,7 @@ int diff_can_type(hid_t f_tid1, /* file data type */ } } opts->not_cmp = 1; - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(0); } /*------------------------------------------------------------------------- @@ -775,7 +795,7 @@ int diff_can_type(hid_t f_tid1, /* file data type */ if(tclass1 == H5T_STRING) { htri_t vstrtype1 = -1; htri_t vstrtype2 = -1; - h5difftrace("diff_can_type end - H5T_STRING\n"); + H5TOOLS_DEBUG("diff_can_type end - H5T_STRING"); vstrtype1 = H5Tis_variable_str(f_tid1); vstrtype2 = H5Tis_variable_str(f_tid2); @@ -786,7 +806,7 @@ int diff_can_type(hid_t f_tid1, /* file data type */ parallel_print("Not comparable: <%s> or <%s> is of mixed string type\n", obj1_name, obj2_name); opts->not_cmp = 1; - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(0); } } @@ -794,9 +814,9 @@ int diff_can_type(hid_t f_tid1, /* file data type */ int nmembs1; int nmembs2; int j; - hid_t memb_type1 = -1; - hid_t memb_type2 = -1; - h5difftrace("diff_can_type end - H5T_COMPOUND\n"); + hid_t memb_type1 = H5I_INVALID_HID; + hid_t memb_type2 = H5I_INVALID_HID; + H5TOOLS_DEBUG("diff_can_type end - H5T_COMPOUND"); nmembs1 = H5Tget_nmembers(f_tid1); nmembs2 = H5Tget_nmembers(f_tid2); @@ -808,7 +828,7 @@ int diff_can_type(hid_t f_tid1, /* file data type */ parallel_print("\n"); } opts->not_cmp = 1; - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(0); } for (j = 0; j < nmembs1; j++) { @@ -821,7 +841,7 @@ int diff_can_type(hid_t f_tid1, /* file data type */ opts->not_cmp = 1; H5Tclose(memb_type1); H5Tclose(memb_type2); - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(0); } H5Tclose(memb_type1); H5Tclose(memb_type2); @@ -829,9 +849,10 @@ int diff_can_type(hid_t f_tid1, /* file data type */ } done: if (ret_value < 0) - opts->err_stat = 1; + opts->err_stat = H5DIFF_ERR; - h5diffdebug2("diff_can_type end - %d\n", ret_value); + H5TOOLS_DEBUG("diff_can_type end - %d", ret_value); + H5TOOLS_ENDDEBUG("exit"); return ret_value; } diff --git a/tools/lib/h5diff_util.c b/tools/lib/h5diff_util.c index 6b5ca2f..8da995a 100644 --- a/tools/lib/h5diff_util.c +++ b/tools/lib/h5diff_util.c @@ -346,7 +346,7 @@ herr_t match_up_memsize (hid_t f_tid1_id, hid_t f_tid2_id, H5Tclose(*m_tid1); if(((*m_tid1) = H5Tget_native_type(f_tid2_id, H5T_DIR_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tget_native_type failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Tget_native_type failed"); *m_size1 = H5Tget_size(*m_tid1); } /* end if */ @@ -354,15 +354,16 @@ herr_t match_up_memsize (hid_t f_tid1_id, hid_t f_tid2_id, H5Tclose(*m_tid2); if(((*m_tid2) = H5Tget_native_type(f_tid1_id, H5T_DIR_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tget_native_type failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Tget_native_type failed"); *m_size2 = H5Tget_size(*m_tid2); } /* end else */ } /* end if */ if((*m_size1) != (*m_size2)) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "native type sizes do not compare"); + H5TOOLS_GOTO_ERROR(FAIL, "native type sizes do not compare"); done: + H5TOOLS_ENDDEBUG("exit"); return ret_value; } diff --git a/tools/lib/h5tools.c b/tools/lib/h5tools.c index d015e1c..7aa2419 100644 --- a/tools/lib/h5tools.c +++ b/tools/lib/h5tools.c @@ -24,11 +24,11 @@ /* global variables */ hid_t H5tools_ERR_STACK_g = 0; -hid_t H5tools_ERR_CLS_g = -1; -hid_t H5E_tools_g = -1; -hid_t H5E_tools_min_id_g = -1; -hid_t H5E_tools_min_info_id_g = -1; -hid_t H5E_tools_min_dbg_id_g = -1; +hid_t H5tools_ERR_CLS_g = H5I_INVALID_HID; +hid_t H5E_tools_g = H5I_INVALID_HID; +hid_t H5E_tools_min_id_g = H5I_INVALID_HID; +hid_t H5E_tools_min_info_id_g = H5I_INVALID_HID; +hid_t H5E_tools_min_dbg_id_g = H5I_INVALID_HID; int compound_data; FILE *rawattrstream = NULL; /* should initialize to stdout but gcc moans about it */ FILE *rawdatastream = NULL; /* should initialize to stdout but gcc moans about it */ @@ -91,14 +91,8 @@ typedef enum { void h5tools_init(void) { - char lib_str[256]; - if (!h5tools_init_g) { - /* register the error class */ - HDsnprintf(lib_str, sizeof(lib_str), "%d.%d.%d",H5_VERS_MAJOR, H5_VERS_MINOR, H5_VERS_RELEASE); - - H5tools_ERR_STACK_g = H5Ecreate_stack(); - H5TOOLS_INIT_ERROR() + H5TOOLS_INIT_ERROR(); if (!rawattrstream) rawattrstream = stdout; @@ -175,8 +169,8 @@ h5tools_close(void) /* Clean up the reference path table, if it's been used */ term_ref_path_table(); - H5TOOLS_CLOSE_ERROR() - H5Eclose_stack(H5tools_ERR_STACK_g); + H5TOOLS_CLOSE_ERROR(); + /* Shut down the library */ H5close(); @@ -436,17 +430,17 @@ h5tools_set_error_file(const char *fname, int is_bin) static hid_t h5tools_get_fapl(hid_t fapl, const char *driver, unsigned *drivernum) { - hid_t new_fapl = -1; /* Copy of file access property list passed in, or new property list */ - int ret_value = SUCCEED; + hid_t new_fapl = H5I_INVALID_HID; /* Copy of file access property list passed in, or new property list */ + herr_t ret_value = SUCCEED; /* Make a copy of the FAPL, for the file open call to use, eventually */ if (fapl == H5P_DEFAULT) { if ((new_fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pcreate failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Pcreate failed"); } /* end if */ else { if ((new_fapl = H5Pcopy(fapl)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pcopy failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Pcopy failed"); } /* end else */ /* Determine which driver the user wants to open the file with. Try @@ -454,7 +448,7 @@ h5tools_get_fapl(hid_t fapl, const char *driver, unsigned *drivernum) if (!HDstrcmp(driver, drivernames[SEC2_IDX])) { /* SEC2 driver */ if (H5Pset_fapl_sec2(new_fapl) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_fapl_sec2 failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Pset_fapl_sec2 failed"); if (drivernum) *drivernum = SEC2_IDX; @@ -466,7 +460,7 @@ h5tools_get_fapl(hid_t fapl, const char *driver, unsigned *drivernum) * is the member size. */ if (H5Pset_fapl_family(new_fapl, (hsize_t) 0, H5P_DEFAULT) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_fapl_family failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Pset_fapl_family failed"); if (drivernum) *drivernum = FAMILY_IDX; @@ -474,7 +468,7 @@ h5tools_get_fapl(hid_t fapl, const char *driver, unsigned *drivernum) else if (!HDstrcmp(driver, drivernames[SPLIT_IDX])) { /* SPLIT Driver */ if (H5Pset_fapl_split(new_fapl, "-m.h5", H5P_DEFAULT, "-r.h5", H5P_DEFAULT) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_fapl_split failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Pset_fapl_split failed"); if (drivernum) *drivernum = SPLIT_IDX; @@ -482,10 +476,10 @@ h5tools_get_fapl(hid_t fapl, const char *driver, unsigned *drivernum) else if (!HDstrcmp(driver, drivernames[MULTI_IDX])) { /* MULTI Driver */ if (H5Pset_fapl_multi(new_fapl, NULL, NULL, NULL, NULL, TRUE) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_fapl_multi failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Pset_fapl_multi failed"); if(drivernum) - *drivernum = MULTI_IDX; + *drivernum = MULTI_IDX; } #ifdef H5_HAVE_PARALLEL else if(!HDstrcmp(driver, drivernames[MPIO_IDX])) { @@ -498,7 +492,7 @@ h5tools_get_fapl(hid_t fapl, const char *driver, unsigned *drivernum) if(mpi_initialized && !mpi_finalized) { if(H5Pset_fapl_mpio(new_fapl, MPI_COMM_WORLD, MPI_INFO_NULL) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_fapl_mpio failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Pset_fapl_mpio failed"); if(drivernum) *drivernum = MPIO_IDX; } /* end if */ @@ -510,7 +504,7 @@ h5tools_get_fapl(hid_t fapl, const char *driver, unsigned *drivernum) done: if((new_fapl != H5P_DEFAULT) && (ret_value < 0)) { H5Pclose(new_fapl); - new_fapl = -1; + new_fapl = H5I_INVALID_HID; } return(new_fapl); @@ -736,7 +730,6 @@ void h5tools_simple_prefix(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx, hsize_t elmtno, int secnum) { - H5TOOLS_ERR_INIT(int, SUCCEED) h5tools_str_t prefix; h5tools_str_t str; /*temporary for indentation */ size_t templength = 0; @@ -748,24 +741,23 @@ h5tools_simple_prefix(FILE *stream, const h5tool_format_t *info, if (!ctx->need_prefix) return; - H5TOOLS_PUSH_STACK(); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter"); + H5TOOLS_DEBUG("enter"); HDmemset(&prefix, 0, sizeof(h5tools_str_t)); HDmemset(&str, 0, sizeof(h5tools_str_t)); /* Terminate previous line, if any */ - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "before CR elmtno=%ld, ctx->cur_column=%d, info->idx_fmt=%s, info->line_suf=%s", elmtno, ctx->cur_column, info->idx_fmt, info->line_suf); + H5TOOLS_DEBUG("before CR elmtno=%ld, ctx->cur_column=%d, info->idx_fmt=%s, info->line_suf=%s", elmtno, ctx->cur_column, info->idx_fmt, info->line_suf); if (ctx->cur_column) { PUTSTREAM(OPT(info->line_suf, ""), stream); HDputc('\n', stream); PUTSTREAM(OPT(info->line_sep, ""), stream); } - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "after CR elmtno=%ld, ctx->ndims=%d", elmtno, ctx->ndims); + H5TOOLS_DEBUG("after CR elmtno=%ld, ctx->ndims=%d", elmtno, ctx->ndims); /* Calculate new prefix */ h5tools_str_prefix(&prefix, info, elmtno, ctx->ndims, ctx); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "prefix=%s - str=%s", prefix.s, str.s); + H5TOOLS_DEBUG("prefix=%s - str=%s", prefix.s, str.s); /* Write new prefix to output */ if (ctx->indent_level > 0) @@ -793,7 +785,7 @@ h5tools_simple_prefix(FILE *stream, const h5tool_format_t *info, PUTSTREAM(h5tools_str_fmt(&prefix, (size_t)0, info->line_pre), stream); templength = h5tools_str_len(&prefix); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "prefix=%s - templength=%d", prefix.s, templength); + H5TOOLS_DEBUG("prefix=%s - templength=%d", prefix.s, templength); for (u = 0; u < indentlevel; u++) { /*we already made the indent for the array indices case */ @@ -806,19 +798,18 @@ h5tools_simple_prefix(FILE *stream, const h5tool_format_t *info, templength += h5tools_str_len(&str); } } - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "prefix=%s - templength=%d", prefix.s, templength); + H5TOOLS_DEBUG("prefix=%s - templength=%d", prefix.s, templength); ctx->cur_column = ctx->prev_prefix_len = templength; ctx->cur_elmt = 0; ctx->need_prefix = 0; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "prefix=%s - str=%s", prefix.s, str.s); + H5TOOLS_DEBUG("prefix=%s - str=%s", prefix.s, str.s); /* Free string */ h5tools_str_close(&prefix); h5tools_str_close(&str); - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit"); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit"); } /*------------------------------------------------------------------------- @@ -934,7 +925,6 @@ h5tools_render_element(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx, h5tools_str_t *buffer, hsize_t *curr_pos, size_t ncols, hsize_t local_elmt_counter, hsize_t elmt_counter) { - H5TOOLS_ERR_INIT(hbool_t, TRUE) hbool_t dimension_break = TRUE; char *s = NULL; char *section = NULL; /* a section of output */ @@ -944,12 +934,11 @@ h5tools_render_element(FILE *stream, const h5tool_format_t *info, if (stream == NULL) return dimension_break; - H5TOOLS_PUSH_STACK(); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter need_prefix=%d", ctx->need_prefix); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "elmt_counter=%ld - local_elmt_counter=%ld", elmt_counter, local_elmt_counter); + H5TOOLS_DEBUG("enter need_prefix=%d", ctx->need_prefix); + H5TOOLS_DEBUG("elmt_counter=%ld - local_elmt_counter=%ld", elmt_counter, local_elmt_counter); s = h5tools_str_fmt(buffer, (size_t)0, "%s"); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "s=%s", s); + H5TOOLS_DEBUG("s=%s", s); /* * If the element would split on multiple lines if printed at our @@ -976,7 +965,7 @@ h5tools_render_element(FILE *stream, const h5tool_format_t *info, */ ctx->need_prefix = TRUE; } - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ctx->need_prefix=%d", ctx->need_prefix); + H5TOOLS_DEBUG("ctx->need_prefix=%d", ctx->need_prefix); } /* @@ -992,9 +981,9 @@ h5tools_render_element(FILE *stream, const h5tool_format_t *info, ctx->need_prefix = TRUE; dimension_break = FALSE; } - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ctx->need_prefix=%d", ctx->need_prefix); + H5TOOLS_DEBUG("ctx->need_prefix=%d", ctx->need_prefix); } - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "elmt_counter=%ld - ctx->size_last_dim=%ld info->line_suf=%s", elmt_counter, ctx->size_last_dim, info->line_suf); + H5TOOLS_DEBUG("elmt_counter=%ld - ctx->size_last_dim=%ld info->line_suf=%s", elmt_counter, ctx->size_last_dim, info->line_suf); /* * If the previous element occupied multiple lines and this element @@ -1008,7 +997,7 @@ h5tools_render_element(FILE *stream, const h5tool_format_t *info, HDstrlen(OPT(info->elmt_suf2, " ")) + HDstrlen(OPT(info->line_suf, ""))) > ncols) ctx->need_prefix = TRUE; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ctx->need_prefix=%d", ctx->need_prefix); + H5TOOLS_DEBUG("ctx->need_prefix=%d", ctx->need_prefix); /* * If too many elements have already been printed then we need to @@ -1016,7 +1005,7 @@ h5tools_render_element(FILE *stream, const h5tool_format_t *info, */ if (info->line_per_line > 0 && ctx->cur_elmt >= info->line_per_line) ctx->need_prefix = TRUE; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ctx->need_prefix=%d", ctx->need_prefix); + H5TOOLS_DEBUG("ctx->need_prefix=%d", ctx->need_prefix); /* * Each OPTIONAL_LINE_BREAK embedded in the rendered string can cause @@ -1045,7 +1034,7 @@ h5tools_render_element(FILE *stream, const h5tool_format_t *info, * Print the prefix or separate the beginning of this element * from the previous element. */ - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ctx->need_prefix=%d", ctx->need_prefix); + H5TOOLS_DEBUG("ctx->need_prefix=%d", ctx->need_prefix); if (ctx->need_prefix) { if (secnum) multiline++; @@ -1055,7 +1044,7 @@ h5tools_render_element(FILE *stream, const h5tool_format_t *info, * this is necessary to print the array indices */ *curr_pos = ctx->sm_pos + local_elmt_counter; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "curr_pos=%ld - ctx->sm_pos=%ld - ctx->ndims=%ld", *curr_pos, ctx->sm_pos, ctx->ndims); + H5TOOLS_DEBUG("curr_pos=%ld - ctx->sm_pos=%ld - ctx->ndims=%ld", *curr_pos, ctx->sm_pos, ctx->ndims); h5tools_simple_prefix(stream, info, ctx, *curr_pos, secnum); } @@ -1063,7 +1052,7 @@ h5tools_render_element(FILE *stream, const h5tool_format_t *info, PUTSTREAM(OPT(info->elmt_suf2, " "), stream); ctx->cur_column += HDstrlen(OPT(info->elmt_suf2, " ")); } - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "section=%s", section); + H5TOOLS_DEBUG("section=%s", section); /* Print the section */ PUTSTREAM(section, stream); @@ -1072,8 +1061,7 @@ h5tools_render_element(FILE *stream, const h5tool_format_t *info, ctx->prev_multiline = multiline; - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit"); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit"); return dimension_break; } @@ -1108,16 +1096,14 @@ h5tools_render_region_element(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx, h5tools_str_t *buffer, hsize_t *curr_pos, size_t ncols, hsize_t *ptdata, hsize_t local_elmt_counter, hsize_t elmt_counter) { - H5TOOLS_ERR_INIT(hbool_t, TRUE) hbool_t dimension_break = TRUE; char *s = NULL; char *section = NULL; /* a section of output */ int secnum; /* section sequence number */ int multiline; /* datum was multiline */ - H5TOOLS_PUSH_STACK(); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter"); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "elmt_counter=%ld - local_elmt_counter=%ld", elmt_counter, local_elmt_counter); + H5TOOLS_DEBUG("enter"); + H5TOOLS_DEBUG("elmt_counter=%ld - local_elmt_counter=%ld", elmt_counter, local_elmt_counter); s = h5tools_str_fmt(buffer, (size_t)0, "%s"); @@ -1210,7 +1196,7 @@ h5tools_render_region_element(FILE *stream, const h5tool_format_t *info, * this is necessary to print the array indices */ *curr_pos = ctx->sm_pos + local_elmt_counter; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "curr_pos=%ld - ctx->sm_pos=%ld", *curr_pos, ctx->sm_pos); + H5TOOLS_DEBUG("curr_pos=%ld - ctx->sm_pos=%ld", *curr_pos, ctx->sm_pos); h5tools_region_simple_prefix(stream, info, ctx, local_elmt_counter, ptdata, secnum); } @@ -1226,8 +1212,7 @@ h5tools_render_region_element(FILE *stream, const h5tool_format_t *info, ctx->prev_multiline = multiline; - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit"); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit"); return dimension_break; } @@ -1243,25 +1228,22 @@ h5tools_render_region_element(FILE *stream, const h5tool_format_t *info, void init_acc_pos(h5tools_context_t *ctx, hsize_t *dims) { - H5TOOLS_ERR_INIT(int, SUCCEED) int i; unsigned j; - H5TOOLS_PUSH_STACK(); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter"); + H5TOOLS_DEBUG("enter"); if(ctx->ndims > 0) { ctx->acc[ctx->ndims - 1] = 1; for (i = ((int)ctx->ndims - 2); i >= 0; i--) { ctx->acc[i] = ctx->acc[i + 1] * dims[i + 1]; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ctx->acc[%d]=%ld", i, ctx->acc[i]); + H5TOOLS_DEBUG("ctx->acc[%d]=%ld", i, ctx->acc[i]); } for (j = 0; j < ctx->ndims; j++) ctx->pos[j] = 0; } - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit"); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit"); } /*------------------------------------------------------------------------- @@ -1276,26 +1258,26 @@ init_acc_pos(h5tools_context_t *ctx, hsize_t *dims) int render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t block_nelmts) { - H5TOOLS_ERR_INIT(int, SUCCEED) - unsigned char *mem = (unsigned char*)_mem; - size_t size; /* datum size */ - hsize_t block_index; - H5T_class_t type_class; - - H5TOOLS_PUSH_STACK(); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter"); + unsigned char *mem = (unsigned char*)_mem; + size_t size; /* datum size */ + hsize_t block_index; + H5T_class_t type_class; + hbool_t past_catch = FALSE; + int ret_value = 0; + + H5TOOLS_DEBUG("enter"); if((size = H5Tget_size(tid)) == 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Tget_size failed"); + H5TOOLS_THROW((-1), "H5Tget_size failed"); if((type_class = H5Tget_class(tid)) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Tget_class failed"); + H5TOOLS_THROW((-1), "H5Tget_class failed"); switch (type_class) { case H5T_INTEGER: case H5T_FLOAT: case H5T_ENUM: case H5T_BITFIELD: - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "numbers"); + H5TOOLS_DEBUG("numbers"); block_index = block_nelmts * size; while(block_index > 0) { size_t bytes_in = 0; /* # of bytes to write */ @@ -1309,7 +1291,7 @@ render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t bytes_wrote = HDfwrite(mem, 1, bytes_in, stream); if(bytes_wrote != bytes_in || (0 == bytes_wrote && HDferror(stream))) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "fwrite failed"); + H5TOOLS_THROW((-1), "fwrite failed"); block_index -= (hsize_t)bytes_wrote; mem = mem + bytes_wrote; @@ -1322,7 +1304,7 @@ render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t char *s = NULL; unsigned char tempuchar; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5T_STRING"); + H5TOOLS_DEBUG("H5T_STRING"); pad = H5Tget_strpad(tid); for (block_index = 0; block_index < block_nelmts; block_index++) { @@ -1333,7 +1315,7 @@ render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t if (s != NULL) size = HDstrlen(s); else - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "NULL string"); + H5TOOLS_THROW((-1), "NULL string"); } else { s = (char *) mem; @@ -1341,7 +1323,7 @@ render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t for (i = 0; i < size && (s[i] || pad != H5T_STR_NULLTERM); i++) { HDmemcpy(&tempuchar, &s[i], sizeof(unsigned char)); if (1 != HDfwrite(&tempuchar, sizeof(unsigned char), 1, stream)) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "fwrite failed"); + H5TOOLS_THROW((-1), "fwrite failed"); } /* i */ } /* for (block_index = 0; block_index < block_nelmts; block_index++) */ } @@ -1351,9 +1333,9 @@ render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t int snmembs; unsigned nmembs; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5T_COMPOUND"); + H5TOOLS_DEBUG("H5T_COMPOUND"); if((snmembs = H5Tget_nmembers(tid)) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Tget_nmembers of compound failed"); + H5TOOLS_THROW((-1), "H5Tget_nmembers of compound failed"); nmembs = (unsigned)snmembs; for (block_index = 0; block_index < block_nelmts; block_index++) { @@ -1361,7 +1343,7 @@ render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t mem = ((unsigned char*)_mem) + block_index * size; for (j = 0; j < nmembs; j++) { - hid_t memb = -1; + hid_t memb = H5I_INVALID_HID; size_t offset; offset = H5Tget_member_offset(tid, j); @@ -1369,7 +1351,7 @@ render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t if (render_bin_output(stream, container, memb, mem + offset, 1) < 0) { H5Tclose(memb); - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "render_bin_output of compound member failed"); + H5TOOLS_THROW((-1), "render_bin_output of compound member failed"); } H5Tclose(memb); @@ -1381,9 +1363,9 @@ render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t { int k, ndims; hsize_t dims[H5S_MAX_RANK], temp_nelmts, nelmts; - hid_t memb = -1; + hid_t memb = H5I_INVALID_HID; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5T_ARRAY"); + H5TOOLS_DEBUG("H5T_ARRAY"); /* get the array's base datatype for each element */ memb = H5Tget_super(tid); ndims = H5Tget_array_ndims(tid); @@ -1398,7 +1380,7 @@ render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t } else { H5Tclose(memb); - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "calculate the number of array elements failed"); + H5TOOLS_THROW((-1), "calculate the number of array elements failed"); } for (block_index = 0; block_index < block_nelmts; block_index++) { @@ -1406,7 +1388,7 @@ render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t /* dump the array element */ if (render_bin_output(stream, container, memb, mem, nelmts) < 0) { H5Tclose(memb); - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "render_bin_output failed"); + H5TOOLS_THROW((-1), "render_bin_output failed"); } } H5Tclose(memb); @@ -1415,9 +1397,9 @@ render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t case H5T_VLEN: { hsize_t nelmts; - hid_t memb = -1; + hid_t memb = H5I_INVALID_HID; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5T_VLEN"); + H5TOOLS_DEBUG("H5T_VLEN"); /* get the VL sequences's base datatype for each element */ memb = H5Tget_super(tid); @@ -1429,7 +1411,7 @@ render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t /* dump the array element */ if (render_bin_output(stream, container, memb, ((char *) (((hvl_t *)((void *)mem))->p)), nelmts) < 0) { H5Tclose(memb); - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "render_bin_output failed"); + H5TOOLS_THROW((-1), "render_bin_output failed"); } } H5Tclose(memb); @@ -1437,9 +1419,9 @@ render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t break; case H5T_REFERENCE: { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "reference class type"); + H5TOOLS_DEBUG("reference class type"); if (H5Tequal(tid, H5T_STD_REF)) { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5T_STD_REF"); + H5TOOLS_DEBUG("H5T_STD_REF"); if (region_output) { /* region data */ hid_t region_id = H5I_INVALID_HID; @@ -1449,8 +1431,7 @@ render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t for (block_index = 0; block_index < block_nelmts; block_index++) { mem = ((unsigned char*)_mem) + block_index * size; if((region_id = H5Ropen_object((const H5R_ref_t *)mem, H5P_DEFAULT, H5P_DEFAULT)) < 0) - H5Epush2(H5tools_ERR_STACK_g, __FILE__, FUNC, __LINE__, H5tools_ERR_CLS_g, H5E_tools_g, H5E_tools_min_id_g, - "H5Ropen_object H5T_STD_REF failed"); + H5TOOLS_INFO("H5Ropen_object H5T_STD_REF failed"); else { if((region_space = H5Ropen_region((const H5R_ref_t *)mem, H5P_DEFAULT, H5P_DEFAULT)) >= 0) { if (!h5tools_is_zero(mem, H5Tget_size(H5T_STD_REF))) { @@ -1461,8 +1442,7 @@ render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t render_bin_output_region_blocks(region_space, region_id, stream, container); } else { - H5Epush2(H5tools_ERR_STACK_g, __FILE__, FUNC, __LINE__, H5tools_ERR_CLS_g, H5E_tools_g, H5E_tools_min_id_g, - "H5Ropen_object H5T_STD_REF NULL"); + H5TOOLS_INFO("H5Ropen_object H5T_STD_REF NULL"); } H5Sclose(region_space); } /* end if (region_space >= 0) */ @@ -1473,22 +1453,22 @@ render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t } else if (H5Tequal(tid, H5T_STD_REF_DSETREG)) { /* if (size == H5R_DSET_REG_REF_BUF_SIZE) */ - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5T_STD_REF_DSETREG"); + H5TOOLS_DEBUG("H5T_STD_REF_DSETREG"); } else if (H5Tequal(tid, H5T_STD_REF_OBJ)) { /* if (size == H5R_OBJ_REF_BUF_SIZE) */ - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5T_STD_REF_OBJ"); + H5TOOLS_DEBUG("H5T_STD_REF_OBJ"); } } break; case H5T_TIME: case H5T_OPAQUE: - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5T_OPAQUE"); + H5TOOLS_DEBUG("H5T_OPAQUE"); for (block_index = 0; block_index < block_nelmts; block_index++) { mem = ((unsigned char*)_mem) + block_index * size; if (size != HDfwrite(mem, sizeof(char), size, stream)) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "fwrite failed"); + H5TOOLS_THROW((-1), "fwrite failed"); } /* end for */ break; @@ -1496,13 +1476,14 @@ render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t case H5T_NCLASSES: default: /* Badness */ - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "bad type class"); + H5TOOLS_THROW((-1), "bad type class"); break; } /* end switch */ +done: + CATCH - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit"); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit"); return ret_value; } @@ -1521,7 +1502,6 @@ int render_bin_output_region_data_blocks(hid_t region_id, FILE *stream, hid_t container, unsigned ndims, hid_t type_id, hsize_t nblocks, hsize_t *ptdata) { - H5TOOLS_ERR_INIT(int, SUCCEED) hsize_t *dims1 = NULL; hsize_t *start = NULL; hsize_t *count = NULL; @@ -1529,18 +1509,20 @@ render_bin_output_region_data_blocks(hid_t region_id, FILE *stream, hsize_t total_size[H5S_MAX_RANK]; unsigned jndx; size_t type_size; - hid_t mem_space = -1; + hid_t mem_space = H5I_INVALID_HID; void *region_buf = NULL; + hbool_t past_catch = FALSE; hsize_t blkndx; - hid_t sid1 = -1; + hid_t sid1 = H5I_INVALID_HID; + int ret_value = -1; /* Get the dataspace of the dataset */ if((sid1 = H5Dget_space(region_id)) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Dget_space failed"); + H5TOOLS_THROW((-1), "H5Dget_space failed"); /* Allocate space for the dimension array */ if((dims1 = (hsize_t *) HDmalloc(sizeof(hsize_t) * ndims)) == NULL) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "Could not allocate buffer for dims"); + H5TOOLS_THROW((-1), "Could not allocate buffer for dims"); /* find the dimensions of each data space from the block coordinates */ numelem = 1; @@ -1551,21 +1533,21 @@ render_bin_output_region_data_blocks(hid_t region_id, FILE *stream, /* Create dataspace for reading buffer */ if((mem_space = H5Screate_simple((int)ndims, dims1, NULL)) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Screate_simple failed"); + H5TOOLS_THROW((-1), "H5Screate_simple failed"); if((type_size = H5Tget_size(type_id)) == 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Tget_size failed"); + H5TOOLS_THROW((-1), "H5Tget_size failed"); if((region_buf = HDmalloc(type_size * (size_t)numelem)) == NULL) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "Could not allocate region buffer"); + H5TOOLS_THROW((-1), "Could not allocate region buffer"); /* Select (x , x , ..., x ) x (y , y , ..., y ) hyperslab for reading memory dataset */ /* 1 2 n 1 2 n */ if((start = (hsize_t *) HDmalloc(sizeof(hsize_t) * ndims)) == NULL) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "Could not allocate buffer for start"); + H5TOOLS_THROW((-1), "Could not allocate buffer for start"); if((count = (hsize_t *) HDmalloc(sizeof(hsize_t) * ndims)) == NULL) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "Could not allocate buffer for count"); + H5TOOLS_THROW((-1), "Could not allocate buffer for count"); for (blkndx = 0; blkndx < nblocks; blkndx++) { for (jndx = 0; jndx < ndims; jndx++) { @@ -1574,16 +1556,16 @@ render_bin_output_region_data_blocks(hid_t region_id, FILE *stream, } if(H5Sselect_hyperslab(sid1, H5S_SELECT_SET, start, NULL, count, NULL) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sselect_hyperslab failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Sselect_hyperslab failed"); if(H5Dread(region_id, type_id, mem_space, sid1, H5P_DEFAULT, region_buf) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dread failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dread failed"); if(H5Sget_simple_extent_dims(mem_space, total_size, NULL) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sget_simple_extent_dims failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Sget_simple_extent_dims failed"); if(render_bin_output(stream, container, type_id, (char*)region_buf, numelem) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "render_bin_output of data region failed"); + H5TOOLS_GOTO_ERROR((-1), "render_bin_output of data region failed"); /* Render the region data element end */ done: ; @@ -1596,10 +1578,11 @@ CATCH HDfree(dims1); if(H5Sclose(mem_space) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sclose failed"); + H5TOOLS_ERROR((-1), "H5Sclose failed"); if(H5Sclose(sid1) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sclose failed"); + H5TOOLS_ERROR((-1), "H5Sclose failed"); + H5TOOLS_ENDDEBUG("exit"); return ret_value; } @@ -1617,51 +1600,53 @@ hbool_t render_bin_output_region_blocks(hid_t region_space, hid_t region_id, FILE *stream, hid_t container) { - H5TOOLS_ERR_INIT(hbool_t, TRUE) hssize_t snblocks; hsize_t nblocks; hsize_t alloc_size; hsize_t *ptdata = NULL; int sndims; unsigned ndims; - hid_t dtype = -1; - hid_t type_id = -1; + hid_t dtype = H5I_INVALID_HID; + hid_t type_id = H5I_INVALID_HID; + hbool_t past_catch = FALSE; + hbool_t ret_value = TRUE; if((snblocks = H5Sget_select_hyper_nblocks(region_space)) <= 0) - H5TOOLS_THROW(FALSE, H5E_tools_min_id_g, "H5Sget_select_hyper_nblocks failed"); + H5TOOLS_THROW(FALSE, "H5Sget_select_hyper_nblocks failed"); nblocks = (hsize_t)snblocks; /* Print block information */ if((sndims = H5Sget_simple_extent_ndims(region_space)) < 0) - H5TOOLS_THROW(FALSE, H5E_tools_min_id_g, "H5Sget_simple_extent_ndims failed"); + H5TOOLS_THROW(FALSE, "H5Sget_simple_extent_ndims failed"); ndims = (unsigned)sndims; alloc_size = nblocks * ndims * 2 * sizeof(ptdata[0]); if((ptdata = (hsize_t*) HDmalloc((size_t) alloc_size)) == NULL) - H5TOOLS_GOTO_ERROR(FALSE, H5E_tools_min_id_g, "Could not allocate buffer for ptdata"); + H5TOOLS_GOTO_ERROR(FALSE, "Could not allocate buffer for ptdata"); if(H5Sget_select_hyper_blocklist(region_space, (hsize_t) 0, nblocks, ptdata) < 0) - H5TOOLS_GOTO_ERROR(FALSE, H5E_tools_min_id_g, "H5Rget_select_hyper_blocklist failed"); + H5TOOLS_GOTO_ERROR(FALSE, "H5Rget_select_hyper_blocklist failed"); if((dtype = H5Dget_type(region_id)) < 0) - H5TOOLS_GOTO_ERROR(FALSE, H5E_tools_min_id_g, "H5Dget_type failed"); + H5TOOLS_GOTO_ERROR(FALSE, "H5Dget_type failed"); if((type_id = H5Tget_native_type(dtype, H5T_DIR_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FALSE, H5E_tools_min_id_g, "H5Tget_native_type failed"); + H5TOOLS_GOTO_ERROR(FALSE, "H5Tget_native_type failed"); render_bin_output_region_data_blocks(region_id, stream, container, ndims, type_id, nblocks, ptdata); - done: +done: HDfree(ptdata); if(type_id > 0 && H5Tclose(type_id) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_ERROR(FALSE, "H5Tclose failed"); if(dtype > 0 && H5Tclose(dtype) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_ERROR(FALSE, "H5Tclose failed"); H5_LEAVE(TRUE) - CATCH +CATCH + H5TOOLS_ENDDEBUG("exit"); return ret_value; } @@ -1687,41 +1672,42 @@ render_bin_output_region_data_points(hid_t region_space, hid_t region_id, FILE *stream, hid_t container, unsigned ndims, hid_t type_id, hsize_t npoints) { - H5TOOLS_ERR_INIT(int, SUCCEED) hsize_t *dims1 = NULL; size_t type_size; - hid_t mem_space = -1; + hid_t mem_space = H5I_INVALID_HID; void *region_buf = NULL; + int ret_value = 0; if((type_size = H5Tget_size(type_id)) == 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tget_size failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tget_size failed"); if((region_buf = HDmalloc(type_size * (size_t)npoints)) == NULL) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "Could not allocate buffer for region"); + H5TOOLS_GOTO_ERROR((-1), "Could not allocate buffer for region"); /* Allocate space for the dimension array */ if((dims1 = (hsize_t *) HDmalloc(sizeof(hsize_t) * ndims)) == NULL) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "Could not allocate buffer for dims"); + H5TOOLS_GOTO_ERROR((-1), "Could not allocate buffer for dims"); dims1[0] = npoints; if((mem_space = H5Screate_simple(1, dims1, NULL)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Screate_simple failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Screate_simple failed"); if(H5Dread(region_id, type_id, mem_space, region_space, H5P_DEFAULT, region_buf) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dread failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dread failed"); if(H5Sget_simple_extent_dims(region_space, dims1, NULL) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sget_simple_extent_dims failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Sget_simple_extent_dims failed"); if(render_bin_output(stream, container, type_id, (char*)region_buf, npoints) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "render_bin_output of data points failed"); + H5TOOLS_GOTO_ERROR((-1), "render_bin_output of data points failed"); - done: +done: HDfree(region_buf); HDfree(dims1); if(H5Sclose(mem_space) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sclose failed"); + H5TOOLS_ERROR((-1), "H5Sclose failed"); + H5TOOLS_ENDDEBUG("exit"); return ret_value; } @@ -1739,40 +1725,42 @@ hbool_t render_bin_output_region_points(hid_t region_space, hid_t region_id, FILE *stream, hid_t container) { - H5TOOLS_ERR_INIT(hbool_t, TRUE) hssize_t snpoints; hsize_t npoints; int sndims; unsigned ndims; - hid_t dtype = -1; - hid_t type_id = -1; + hid_t dtype = H5I_INVALID_HID; + hid_t type_id = H5I_INVALID_HID; + hbool_t past_catch = FALSE; + hbool_t ret_value = TRUE; if((snpoints = H5Sget_select_elem_npoints(region_space)) <= 0) - H5TOOLS_THROW(FALSE, H5E_tools_min_id_g, "H5Sget_select_elem_npoints failed"); + H5TOOLS_THROW(FALSE, "H5Sget_select_elem_npoints failed"); npoints = (hsize_t)snpoints; /* Allocate space for the dimension array */ if((sndims = H5Sget_simple_extent_ndims(region_space)) < 0) - H5TOOLS_THROW(FALSE, H5E_tools_min_id_g, "H5Sget_simple_extent_ndims failed"); + H5TOOLS_THROW(FALSE, "H5Sget_simple_extent_ndims failed"); ndims = (unsigned)sndims; if((dtype = H5Dget_type(region_id)) < 0) - H5TOOLS_GOTO_ERROR(FALSE, H5E_tools_min_id_g, "H5Dget_type failed"); + H5TOOLS_GOTO_ERROR(FALSE, "H5Dget_type failed"); if((type_id = H5Tget_native_type(dtype, H5T_DIR_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FALSE, H5E_tools_min_id_g, "H5Tget_native_type failed"); + H5TOOLS_GOTO_ERROR(FALSE, "H5Tget_native_type failed"); render_bin_output_region_data_points(region_space, region_id, stream, container, ndims, type_id, npoints); - done: +done: if(type_id > 0 && H5Tclose(type_id) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_ERROR(FALSE, "H5Tclose failed"); if(dtype > 0 && H5Tclose(dtype) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_ERROR(FALSE, "H5Tclose failed"); H5_LEAVE(ret_value) CATCH + H5TOOLS_ENDDEBUG("exit"); return ret_value; } diff --git a/tools/lib/h5tools.h b/tools/lib/h5tools.h index dad4af7..9440e7a 100644 --- a/tools/lib/h5tools.h +++ b/tools/lib/h5tools.h @@ -581,6 +581,7 @@ H5TOOLS_DLLVAR int enable_error_stack; /* re-enable error stack; disable=0 e #define H5_TOOLS_DATASET "DATASET" #define H5_TOOLS_DATATYPE "DATATYPE" #define H5_TOOLS_ATTRIBUTE "ATTRIBUTE" +#define H5_TOOLS_UNKNOWN "UNKNOWN" /* Definitions of useful routines */ H5TOOLS_DLL void h5tools_init(void); diff --git a/tools/lib/h5tools_dump.c b/tools/lib/h5tools_dump.c index 8b08d7f..3af2bd8 100644 --- a/tools/lib/h5tools_dump.c +++ b/tools/lib/h5tools_dump.c @@ -257,7 +257,6 @@ h5tools_dump_simple_data(FILE *stream, const h5tool_format_t *info, hid_t contai h5tools_context_t *ctx, /* in,out */ unsigned flags, hsize_t nelmts, hid_t type, void *_mem) { - H5TOOLS_ERR_INIT(int, SUCCEED) unsigned char *mem = (unsigned char*) _mem; hsize_t i; /* element counter */ size_t size; /* size of each datum */ @@ -272,13 +271,13 @@ h5tools_dump_simple_data(FILE *stream, const h5tool_format_t *info, hid_t contai * this var to count elements and * break after we see a number equal * to the ctx->size_last_dim. */ + int ret_value = 0; - H5TOOLS_PUSH_STACK(); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter file=%p", (void*)stream); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "rawdata file=%p", (void*)rawdatastream); + H5TOOLS_DEBUG("enter file=%p", (void*)stream); + H5TOOLS_DEBUG("rawdata file=%p", (void*)rawdatastream); /* binary dump */ if (bin_output && (rawdatastream != NULL)) { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "render_bin_output"); + H5TOOLS_DEBUG("render_bin_output"); if (render_bin_output(rawdatastream, container, type, _mem, nelmts) < 0) { PRINTVALSTREAM(rawoutstream, "\nError in writing binary stream\n"); } @@ -287,7 +286,7 @@ h5tools_dump_simple_data(FILE *stream, const h5tool_format_t *info, hid_t contai /* setup */ HDmemset(&buffer, 0, sizeof(h5tools_str_t)); size = H5Tget_size(type); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "type size is %ld", size); + H5TOOLS_DEBUG("type size is %ld", size); if (info->line_ncols > 0) ncols = info->line_ncols; @@ -298,7 +297,7 @@ h5tools_dump_simple_data(FILE *stream, const h5tool_format_t *info, hid_t contai */ curr_pos = ctx->sm_pos; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "data render start:%ld", nelmts); + H5TOOLS_DEBUG("data render start:%ld", nelmts); for (i = 0; i < nelmts; i++, ctx->cur_elmt++, elmt_counter++) { void* memref = mem + i * size; @@ -315,13 +314,12 @@ h5tools_dump_simple_data(FILE *stream, const h5tool_format_t *info, hid_t contai if(FALSE == dimension_break) elmt_counter = 0; } /* end for (i = 0; i < nelmts... */ - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "data render finish"); + H5TOOLS_DEBUG("data render finish"); h5tools_str_close(&buffer); }/* else bin */ - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit"); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit"); return ret_value; } @@ -357,27 +355,26 @@ h5tools_dump_region_attribute(hid_t region_id, size_t ncols, hsize_t region_elmt_counter, /* element counter */ hsize_t elmt_counter) { - H5TOOLS_ERR_INIT(hbool_t, TRUE) - hbool_t dimension_break = TRUE; - hid_t atype = H5I_INVALID_HID; - hid_t type_id = H5I_INVALID_HID; - hid_t region_space = H5I_INVALID_HID; - h5tool_format_t outputformat; /* Use to disable prefix for DATA attribute display */ + hbool_t dimension_break = TRUE; + hid_t atype = H5I_INVALID_HID; + hid_t type_id = H5I_INVALID_HID; + hid_t region_space = H5I_INVALID_HID; + h5tool_format_t outputformat; /* Use to disable prefix for DATA attribute display */ + hbool_t past_catch = FALSE; + hbool_t ret_value = TRUE; HDassert(info); HDassert(ctx); HDassert(buffer); - H5TOOLS_PUSH_STACK(); - outputformat = *info; outputformat.idx_fmt = ""; outputformat.idx_n_fmt = ""; outputformat.idx_sep = ""; outputformat.line_pre = ""; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter file=%p", (void*)stream); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "rawdata file=%p", (void*)rawdatastream); + H5TOOLS_DEBUG("enter file=%p", (void*)stream); + H5TOOLS_DEBUG("rawdata file=%p", (void*)rawdatastream); /* Render the region { element begin */ h5tools_str_reset(buffer); @@ -387,11 +384,11 @@ h5tools_dump_region_attribute(hid_t region_id, /* Render the region { element end */ if((region_space = H5Aget_space(region_id)) < 0) - H5TOOLS_GOTO_ERROR(dimension_break, H5E_tools_min_id_g, "H5Aget_space failed"); + H5TOOLS_GOTO_ERROR(dimension_break, "H5Aget_space failed"); if((atype = H5Aget_type(region_id)) < 0) - H5TOOLS_GOTO_ERROR(dimension_break, H5E_tools_min_id_g, "H5Aget_type failed"); + H5TOOLS_GOTO_ERROR(dimension_break, "H5Aget_type failed"); if((type_id = H5Tget_native_type(atype, H5T_DIR_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(dimension_break, H5E_tools_min_id_g, "H5Tget_native_type failed"); + H5TOOLS_GOTO_ERROR(dimension_break, "H5Tget_native_type failed"); ctx->indent_level++; ctx->need_prefix = TRUE; @@ -442,13 +439,13 @@ h5tools_dump_region_attribute(hid_t region_id, h5tools_dump_data(stream, &outputformat, ctx, region_id, FALSE); } - done: +done: if(H5Tclose(type_id) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_ERROR(dimension_break, "H5Tclose failed"); if(H5Tclose(atype) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_ERROR(dimension_break, "H5Tclose failed"); ctx->indent_level--; ctx->need_prefix = TRUE; @@ -463,8 +460,7 @@ h5tools_dump_region_attribute(hid_t region_id, CATCH - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit"); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit"); return ret_value; } @@ -493,7 +489,6 @@ h5tools_print_region_data_blocks(hid_t region_id, h5tools_str_t *buffer, /* string into which to render */ size_t ncols, unsigned ndims, hid_t type_id, hsize_t nblocks, hsize_t *ptdata) { - H5TOOLS_ERR_INIT(int, SUCCEED) hbool_t dimension_break = TRUE; hsize_t *dims1 = NULL; hsize_t *start = NULL; @@ -507,11 +502,13 @@ h5tools_print_region_data_blocks(hid_t region_id, hsize_t numindex; unsigned indx; unsigned jndx; + hbool_t past_catch = FALSE; size_t type_size; - hid_t mem_space = -1; - hid_t sid1 = -1; + hid_t mem_space = H5I_INVALID_HID; + hid_t sid1 = H5I_INVALID_HID; h5tools_context_t ctx; void *region_buf = NULL; + int ret_value = 0; HDassert(info); HDassert(cur_ctx); @@ -520,19 +517,18 @@ h5tools_print_region_data_blocks(hid_t region_id, HDmemset(&ctx, 0, sizeof(ctx)); - H5TOOLS_PUSH_STACK(); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter"); + H5TOOLS_DEBUG("enter"); if((type_size = H5Tget_size(type_id)) == 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Tget_size failed"); + H5TOOLS_THROW(FAIL, "H5Tget_size failed"); /* Get the dataspace of the dataset */ if((sid1 = H5Dget_space(region_id)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_space failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Dget_space failed"); /* Allocate space for the dimension array */ if((dims1 = (hsize_t *) HDmalloc((size_t)(sizeof(hsize_t) * ndims))) == NULL) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "Could not allocate buffer for dims"); + H5TOOLS_GOTO_ERROR(FAIL, "Could not allocate buffer for dims"); /* find the dimensions of each data space from the block coordinates */ numelem = 1; @@ -543,18 +539,18 @@ h5tools_print_region_data_blocks(hid_t region_id, /* Create dataspace for reading buffer */ if((mem_space = H5Screate_simple((int)ndims, dims1, NULL)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Screate_simple failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Screate_simple failed"); if((region_buf = HDmalloc(type_size * (size_t)numelem)) == NULL) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "Could not allocate region buffer"); + H5TOOLS_GOTO_ERROR(FAIL, "Could not allocate region buffer"); /* Select (x , x , ..., x ) x (y , y , ..., y ) hyperslab for reading memory dataset */ /* 1 2 n 1 2 n */ if((start = (hsize_t *) HDmalloc(sizeof(hsize_t) * ndims)) == NULL) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "Could not allocate buffer for start"); + H5TOOLS_GOTO_ERROR(FAIL, "Could not allocate buffer for start"); if((count = (hsize_t *) HDmalloc(sizeof(hsize_t) * ndims)) == NULL) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "Could not allocate buffer for count"); + H5TOOLS_GOTO_ERROR(FAIL, "Could not allocate buffer for count"); curr_pos = 0; ctx.indent_level = cur_ctx->indent_level; @@ -592,7 +588,7 @@ h5tools_print_region_data_blocks(hid_t region_id, h5tools_region_simple_prefix(stream, info, &ctx, curr_pos, ptdata, 0); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "data render start:%ld", numelem); + H5TOOLS_DEBUG("data render start:%ld", numelem); elmtno = 0; for (numindex = 0; numindex < numelem; numindex++, elmtno++, ctx.cur_elmt++) { /* Render the region data element begin */ @@ -614,33 +610,32 @@ h5tools_print_region_data_blocks(hid_t region_id, } /* end for (numindex = 0; numindex < numelem; numindex++, elmtno++, ctx.cur_elmt++) */ } else { - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sget_simple_extent_dims failed"); + H5TOOLS_ERROR(FAIL, "H5Sget_simple_extent_dims failed"); } ctx.indent_level--; } else { - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dread failed"); + H5TOOLS_ERROR(FAIL, "H5Dread failed"); } } else { - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sselect_hyperslab failed"); + H5TOOLS_ERROR(FAIL, "H5Sselect_hyperslab failed"); } } /* end for (blkndx = 0; blkndx < nblocks; blkndx++) */ - done: +done: HDfree(start); HDfree(count); HDfree(region_buf); HDfree(dims1); if(H5Sclose(mem_space) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sclose failed"); + H5TOOLS_ERROR(FAIL, "H5Sclose failed"); if(H5Sclose(sid1) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sclose failed"); + H5TOOLS_ERROR(FAIL, "H5Sclose failed"); CATCH - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit"); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit"); return ret_value; } @@ -677,7 +672,6 @@ h5tools_dump_region_data_blocks(hid_t region_space, hid_t region_id, size_t ncols, hsize_t region_elmt_counter, /* element counter */ hsize_t elmt_counter) { - H5TOOLS_ERR_INIT(hbool_t, TRUE) hbool_t dimension_break = TRUE; hssize_t snblocks; hsize_t nblocks; @@ -689,13 +683,13 @@ h5tools_dump_region_data_blocks(hid_t region_space, hid_t region_id, hid_t dtype = H5I_INVALID_HID; hid_t type_id = H5I_INVALID_HID; h5tool_format_t outputformat; /* Use to disable prefix for DATA attribute display */ + hbool_t past_catch = FALSE; + hbool_t ret_value = TRUE; HDassert(info); HDassert(ctx); HDassert(buffer); - H5TOOLS_PUSH_STACK(); - outputformat = *info; outputformat.idx_fmt = ""; outputformat.idx_n_fmt = ""; @@ -703,15 +697,15 @@ h5tools_dump_region_data_blocks(hid_t region_space, hid_t region_id, outputformat.line_pre = ""; if((snblocks = H5Sget_select_hyper_nblocks(region_space)) <= 0) - H5TOOLS_THROW(dimension_break, H5E_tools_min_id_g, "H5Sget_select_hyper_nblocks failed"); + H5TOOLS_THROW(dimension_break, "H5Sget_select_hyper_nblocks failed"); nblocks = (hsize_t)snblocks; /* Print block information */ if((sndims = H5Sget_simple_extent_ndims(region_space)) < 0) - H5TOOLS_THROW(dimension_break, H5E_tools_min_id_g, "H5Sget_simple_extent_ndims failed"); + H5TOOLS_THROW(dimension_break, "H5Sget_simple_extent_ndims failed"); ndims = (unsigned)sndims; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter ndims=%d", ndims); + H5TOOLS_DEBUG("enter ndims=%d", ndims); /* Render the region { element begin */ h5tools_str_reset(buffer); @@ -730,10 +724,10 @@ h5tools_dump_region_data_blocks(hid_t region_space, hid_t region_id, alloc_size = nblocks * ndims * 2 * sizeof(ptdata[0]); HDassert(alloc_size == (hsize_t) ((size_t) alloc_size)); /*check for overflow*/ if((ptdata = (hsize_t*) HDmalloc((size_t) alloc_size)) == NULL) - H5TOOLS_GOTO_ERROR(dimension_break, H5E_tools_min_id_g, "Could not allocate buffer for ptdata"); + H5TOOLS_GOTO_ERROR(dimension_break, "Could not allocate buffer for ptdata"); if(H5Sget_select_hyper_blocklist(region_space, (hsize_t)0, nblocks, ptdata) < 0) - H5TOOLS_GOTO_ERROR(dimension_break, H5E_tools_min_id_g, "H5Rget_select_hyper_blocklist failed"); + H5TOOLS_GOTO_ERROR(dimension_break, "H5Rget_select_hyper_blocklist failed"); for(indx = 0; indx < nblocks; indx++) { unsigned loop_indx; @@ -759,9 +753,9 @@ h5tools_dump_region_data_blocks(hid_t region_space, hid_t region_id, ctx->need_prefix = TRUE; if((dtype = H5Dget_type(region_id)) < 0) - H5TOOLS_GOTO_ERROR(dimension_break, H5E_tools_min_id_g, "H5Dget_type failed"); + H5TOOLS_GOTO_ERROR(dimension_break, "H5Dget_type failed"); if((type_id = H5Tget_native_type(dtype, H5T_DIR_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(dimension_break, H5E_tools_min_id_g, "H5Tget_native_type failed"); + H5TOOLS_GOTO_ERROR(dimension_break, "H5Tget_native_type failed"); /* Render the datatype element begin */ h5tools_str_reset(buffer); @@ -818,14 +812,15 @@ h5tools_dump_region_data_blocks(hid_t region_space, hid_t region_id, h5tools_print_region_data_blocks(region_id, rawdatastream, info, ctx, buffer, ncols, ndims, type_id, nblocks, ptdata); } - done: + +done: HDfree(ptdata); if(type_id > 0 && H5Tclose(type_id) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_ERROR(dimension_break, "H5Tclose failed"); if(dtype > 0 && H5Tclose(dtype) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_ERROR(dimension_break, "H5Tclose failed"); if (region_output) { ctx->need_prefix = TRUE; @@ -858,8 +853,7 @@ h5tools_dump_region_data_blocks(hid_t region_space, hid_t region_id, CATCH - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit"); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit"); return ret_value; } @@ -888,7 +882,6 @@ h5tools_print_region_data_points(hid_t region_space, hid_t region_id, h5tools_str_t *buffer, size_t ncols, unsigned ndims, hid_t type_id, hsize_t npoints, hsize_t *ptdata) { - H5TOOLS_ERR_INIT(int, SUCCEED) hbool_t dimension_break = TRUE; hsize_t *dims1 = NULL; hsize_t elmtno; /* elemnt index */ @@ -901,6 +894,8 @@ h5tools_print_region_data_points(hid_t region_space, hid_t region_id, hid_t mem_space = H5I_INVALID_HID; void *region_buf = NULL; h5tools_context_t ctx; + hbool_t past_catch = FALSE; + int ret_value = 0; HDassert(info); HDassert(cur_ctx); @@ -908,25 +903,24 @@ h5tools_print_region_data_points(hid_t region_space, hid_t region_id, HDassert(ptdata); HDassert(ndims > 0); - H5TOOLS_PUSH_STACK(); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter"); + H5TOOLS_DEBUG("enter"); HDmemset(&ctx, 0, sizeof(ctx)); /* Allocate space for the dimension array */ if((dims1 = (hsize_t *) HDmalloc(sizeof(hsize_t) * ndims)) == NULL) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "Could not allocate buffer for dims"); + H5TOOLS_THROW((-1), "Could not allocate buffer for dims"); dims1[0] = npoints; /* Create dataspace for reading buffer */ if((mem_space = H5Screate_simple(1, dims1, NULL)) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Screate_simple failed"); + H5TOOLS_THROW((-1), "H5Screate_simple failed"); if((type_size = H5Tget_size(type_id)) == 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Tget_size failed"); + H5TOOLS_THROW((-1), "H5Tget_size failed"); if((region_buf = HDmalloc(type_size * (size_t)npoints)) == NULL) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "Could not allocate buffer for region"); + H5TOOLS_THROW((-1), "Could not allocate buffer for region"); curr_pos = 0; ctx.indent_level = cur_ctx->indent_level; @@ -935,9 +929,9 @@ h5tools_print_region_data_points(hid_t region_space, hid_t region_id, ctx.ndims = ndims; if(H5Dread(region_id, type_id, mem_space, region_space, H5P_DEFAULT, region_buf) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dread failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dread failed"); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "data render start:%ld", npoints); + H5TOOLS_DEBUG("data render start:%ld", npoints); elmtno = 0; for (jndx = 0; jndx < npoints; jndx++, elmtno++) { ctx.need_prefix = TRUE; @@ -984,7 +978,7 @@ h5tools_print_region_data_points(hid_t region_space, hid_t region_id, elmtno = 0; } else { - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sget_simple_extent_dims failed"); + H5TOOLS_ERROR((-1), "H5Sget_simple_extent_dims failed"); } ctx.indent_level--; } /* end for (jndx = 0; jndx < npoints; jndx++, elmtno++) */ @@ -995,10 +989,9 @@ CATCH HDfree(dims1); if(H5Sclose(mem_space) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sclose failed"); + H5TOOLS_ERROR((-1), "H5Sclose failed"); - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit"); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit"); return ret_value; } @@ -1032,7 +1025,6 @@ h5tools_dump_region_data_points(hid_t region_space, hid_t region_id, h5tools_str_t *buffer, hsize_t *curr_pos, size_t ncols, hsize_t region_elmt_counter, hsize_t elmt_counter) { - H5TOOLS_ERR_INIT(hbool_t, TRUE) hbool_t dimension_break = TRUE; hssize_t snpoints; hsize_t npoints; @@ -1044,13 +1036,13 @@ h5tools_dump_region_data_points(hid_t region_space, hid_t region_id, hid_t dtype = H5I_INVALID_HID; hid_t type_id = H5I_INVALID_HID; h5tool_format_t outputformat; /* Use to disable prefix for DATA attribute display */ + hbool_t past_catch = FALSE; + hbool_t ret_value = TRUE; HDassert(info); HDassert(ctx); HDassert(buffer); - H5TOOLS_PUSH_STACK(); - outputformat = *info; outputformat.idx_fmt = ""; outputformat.idx_n_fmt = ""; @@ -1058,15 +1050,15 @@ h5tools_dump_region_data_points(hid_t region_space, hid_t region_id, outputformat.line_pre = ""; if((snpoints = H5Sget_select_elem_npoints(region_space)) <= 0) - H5TOOLS_THROW(dimension_break, H5E_tools_min_id_g, "H5Sget_select_elem_npoints failed"); + H5TOOLS_THROW(dimension_break, "H5Sget_select_elem_npoints failed"); npoints = (hsize_t)snpoints; /* Allocate space for the dimension array */ if((sndims = H5Sget_simple_extent_ndims(region_space)) < 0) - H5TOOLS_THROW(dimension_break, H5E_tools_min_id_g, "H5Sget_simple_extent_ndims failed"); + H5TOOLS_THROW(dimension_break, "H5Sget_simple_extent_ndims failed"); ndims = (unsigned)sndims; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter ndims=%d", ndims); + H5TOOLS_DEBUG("enter ndims=%d", ndims); /* Render the region { element begin */ h5tools_str_reset(buffer); @@ -1085,10 +1077,10 @@ h5tools_dump_region_data_points(hid_t region_space, hid_t region_id, alloc_size = npoints * ndims * sizeof(ptdata[0]); HDassert(alloc_size == (hsize_t) ((size_t) alloc_size)); /*check for overflow*/ if(NULL == (ptdata = (hsize_t *)HDmalloc((size_t) alloc_size))) - H5TOOLS_GOTO_ERROR(dimension_break, H5E_tools_min_id_g, "Could not allocate buffer for ptdata"); + H5TOOLS_GOTO_ERROR(dimension_break, "Could not allocate buffer for ptdata"); if(H5Sget_select_elem_pointlist(region_space, (hsize_t) 0, npoints, ptdata) < 0) - H5TOOLS_GOTO_ERROR(dimension_break, H5E_tools_min_id_g, "H5Sget_select_elem_pointlist failed"); + H5TOOLS_GOTO_ERROR(dimension_break, "H5Sget_select_elem_pointlist failed"); for (indx = 0; indx < npoints; indx++) { unsigned loop_indx; @@ -1109,9 +1101,9 @@ h5tools_dump_region_data_points(hid_t region_space, hid_t region_id, ctx->need_prefix = TRUE; if((dtype = H5Dget_type(region_id)) < 0) - H5TOOLS_GOTO_ERROR(dimension_break, H5E_tools_min_id_g, "H5Dget_type failed"); + H5TOOLS_GOTO_ERROR(dimension_break, "H5Dget_type failed"); if((type_id = H5Tget_native_type(dtype, H5T_DIR_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(dimension_break, H5E_tools_min_id_g, "H5Tget_native_type failed"); + H5TOOLS_GOTO_ERROR(dimension_break, "H5Tget_native_type failed"); /* Render the datatype element begin */ h5tools_str_reset(buffer); @@ -1170,14 +1162,14 @@ h5tools_dump_region_data_points(hid_t region_space, hid_t region_id, h5tools_print_region_data_points(region_space, region_id, rawdatastream, info, ctx, buffer, ncols, ndims, type_id, npoints, ptdata); } - done: +done: HDfree(ptdata); if(type_id > 0 && H5Tclose(type_id) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_ERROR(dimension_break, "H5Tclose failed"); if(dtype > 0 && H5Tclose(dtype) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_ERROR(dimension_break, "H5Tclose failed"); if (region_output) { ctx->need_prefix = TRUE; @@ -1210,8 +1202,7 @@ h5tools_dump_region_data_points(hid_t region_space, hid_t region_id, H5_LEAVE(dimension_break) CATCH - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit"); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit"); return ret_value; } @@ -1259,7 +1250,6 @@ h5tools_print_simple_subset(FILE *stream, const h5tool_format_t *info, h5tools_c hsize_t *total_size, /* total size of dataset */ unsigned int row_dim) /* index of row_counter dimension */ { - H5TOOLS_ERR_INIT(herr_t, SUCCEED) size_t i; /* counters */ size_t j; /* counters */ hsize_t zero[1] = {0}; /* vector of zeros */ @@ -1276,12 +1266,13 @@ h5tools_print_simple_subset(FILE *stream, const h5tool_format_t *info, h5tools_c hid_t sm_space = H5I_INVALID_HID; /* stripmine data space */ hsize_t size_row_block; /* size for blocks along rows */ hsize_t row_counter = 0; - + hbool_t past_catch = FALSE; /* VL data special information */ - unsigned int vl_data = 0; /* contains VL datatypes */ + unsigned int vl_data = 0; /* contains VL datatypes */ + herr_t ret_value = SUCCEED; if ((size_t) ctx->ndims > NELMTS(sm_size)) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "ndims and sm_size comparision failed"); + H5TOOLS_THROW(FAIL, "ndims and sm_size comparision failed"); if (ctx->ndims > 0) init_acc_pos(ctx, total_size); @@ -1309,10 +1300,10 @@ h5tools_print_simple_subset(FILE *stream, const h5tool_format_t *info, h5tools_c /* calculate the potential number of elements we're going to print */ if(H5Sselect_hyperslab(f_space, H5S_SELECT_SET, temp_start, temp_stride, temp_count, temp_block) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Sselect_hyperslab failed"); + H5TOOLS_THROW(FAIL, "H5Sselect_hyperslab failed"); if((ssm_nelmts = H5Sget_select_npoints(f_space)) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Sget_select_npoints failed"); + H5TOOLS_THROW(FAIL, "H5Sget_select_npoints failed"); sm_nelmts = (hsize_t)ssm_nelmts; if (sm_nelmts > 0) { @@ -1321,7 +1312,7 @@ h5tools_print_simple_subset(FILE *stream, const h5tool_format_t *info, h5tools_c * a hyperslab whose size is manageable. */ if((sm_nbytes = p_type_nbytes = H5Tget_size(p_type)) == 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Tget_size failed"); + H5TOOLS_THROW(FAIL, "H5Tget_size failed"); if (ctx->ndims > 0) for (i = ctx->ndims; i > 0; --i) { @@ -1335,17 +1326,17 @@ h5tools_print_simple_subset(FILE *stream, const h5tool_format_t *info, h5tools_c HDassert(sm_nbytes == (hsize_t) ((size_t) sm_nbytes)); /*check for overflow*/ if(NULL == (sm_buf = (unsigned char *)HDmalloc((size_t) sm_nelmts * p_type_nbytes))) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "Could not allocate buffer for strip-mine"); + H5TOOLS_THROW(FAIL, "Could not allocate buffer for strip-mine"); if((sm_space = H5Screate_simple(1, &sm_nelmts, NULL)) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Screate_simple failed"); + H5TOOLS_THROW(FAIL, "H5Screate_simple failed"); if(H5Sselect_hyperslab(sm_space, H5S_SELECT_SET, zero, NULL, &sm_nelmts, NULL) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Sselect_hyperslab failed"); + H5TOOLS_THROW(FAIL, "H5Sselect_hyperslab failed"); /* read the data */ if(H5Dread(dset, p_type, sm_space, f_space, H5P_DEFAULT, sm_buf) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Dread failed"); + H5TOOLS_THROW(FAIL, "H5Dread failed"); /* print the data */ flags = START_OF_DATA; @@ -1359,7 +1350,7 @@ h5tools_print_simple_subset(FILE *stream, const h5tool_format_t *info, h5tools_c /* print array indices. get the lower bound of the hyperslab and calulate the element position at the start of hyperslab */ if(H5Sget_select_bounds(f_space, low, high) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Sget_select_bounds failed"); + H5TOOLS_THROW(FAIL, "H5Sget_select_bounds failed"); elmtno = 0; for (i = 0; i < (size_t) ctx->ndims - 1; i++) { @@ -1377,20 +1368,20 @@ h5tools_print_simple_subset(FILE *stream, const h5tool_format_t *info, h5tools_c ctx->need_prefix = TRUE; if(h5tools_dump_simple_data(stream, info, dset, ctx, flags, sm_nelmts, p_type, sm_buf) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "h5tools_dump_simple_data failed"); + H5TOOLS_THROW(FAIL, "h5tools_dump_simple_data failed"); /* Reclaim any VL memory, if necessary */ if (vl_data) H5Treclaim(p_type, sm_space, H5P_DEFAULT, sm_buf); if(H5Sclose(sm_space) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Sclose failed"); + H5TOOLS_THROW(FAIL, "H5Sclose failed"); if(sm_buf) HDfree(sm_buf); sm_buf = NULL; } else - H5TOOLS_THROW(SUCCEED, H5E_tools_min_id_g, "nothing to print"); + H5TOOLS_THROW(SUCCEED, "nothing to print"); ctx->continuation++; @@ -1400,6 +1391,7 @@ CATCH if(sm_buf) HDfree(sm_buf); + H5TOOLS_ENDDEBUG("exit"); return ret_value; } @@ -1579,17 +1571,18 @@ static herr_t h5tools_dump_simple_subset(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx, hid_t dset, hid_t p_type) { - H5TOOLS_ERR_INIT(herr_t, SUCCEED) - int sndims; - hid_t f_space = H5I_INVALID_HID; /* file data space */ - size_t i; /* counters */ - hsize_t total_size[H5S_MAX_RANK];/* total size of dataset*/ + int sndims; + hid_t f_space = H5I_INVALID_HID; /* file data space */ + size_t i; /* counters */ + hsize_t total_size[H5S_MAX_RANK];/* total size of dataset*/ + hbool_t past_catch = FALSE; + herr_t ret_value = SUCCEED; if((f_space = H5Dget_space(dset)) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Dget_space failed"); + H5TOOLS_THROW(FAIL, "H5Dget_space failed"); if((sndims = H5Sget_simple_extent_ndims(f_space)) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Sget_simple_extent_ndims failed"); + H5TOOLS_THROW(FAIL, "H5Sget_simple_extent_ndims failed"); ctx->ndims = (unsigned)sndims; /* assume entire data space to be printed */ @@ -1598,7 +1591,7 @@ h5tools_dump_simple_subset(FILE *stream, const h5tool_format_t *info, h5tools_co ctx->p_min_idx[i] = 0; if(H5Sget_simple_extent_dims(f_space, total_size, NULL) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Sget_simple_extent_dims failed"); + H5TOOLS_THROW(FAIL, "H5Sget_simple_extent_dims failed"); ctx->size_last_dim = total_size[ctx->ndims - 1]; /* Set the compound datatype field list for display */ @@ -1608,8 +1601,9 @@ h5tools_dump_simple_subset(FILE *stream, const h5tool_format_t *info, h5tools_co CATCH if(f_space >= 0 && H5Sclose(f_space) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Sclose failed"); + H5TOOLS_THROW(FAIL, "H5Sclose failed"); + H5TOOLS_ENDDEBUG("exit"); return ret_value; } @@ -1632,7 +1626,6 @@ static int h5tools_dump_simple_dset(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx, hid_t dset, hid_t p_type) { - H5TOOLS_ERR_INIT(herr_t, SUCCEED) hid_t f_space = H5I_INVALID_HID; /* file data space */ hsize_t elmtno; /* counter */ size_t i; /* counter */ @@ -1641,6 +1634,7 @@ h5tools_dump_simple_dset(FILE *stream, const h5tool_format_t *info, h5tools_cont hsize_t zero[8]; /* vector of zeros */ unsigned int flags; /* buffer extent flags */ hsize_t total_size[H5S_MAX_RANK]; /* total size of dataset*/ + hbool_t past_catch = FALSE; /* Print info */ size_t p_type_nbytes; /* size of memory type */ @@ -1660,20 +1654,20 @@ h5tools_dump_simple_dset(FILE *stream, const h5tool_format_t *info, h5tools_cont /* VL data special information */ unsigned int vl_data = 0; /* contains VL datatypes */ + int ret_value = 0; - H5TOOLS_PUSH_STACK(); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter"); - if (FAIL == (f_space = H5Dget_space(dset))) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_space failed"); + H5TOOLS_DEBUG("enter"); + if (H5I_INVALID_HID == (f_space = H5Dget_space(dset))) + H5TOOLS_GOTO_ERROR((-1), "H5Dget_space failed"); sndims = H5Sget_simple_extent_ndims(f_space); if(sndims < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_simple_extent_ndims failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dget_simple_extent_ndims failed"); ctx->ndims = (unsigned)sndims; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "sndims:%d", sndims); + H5TOOLS_DEBUG("sndims:%d", sndims); if ((size_t)ctx->ndims > NELMTS(sm_size)) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "ctx->ndims > NELMTS(sm_size) failed"); + H5TOOLS_GOTO_ERROR((-1), "ctx->ndims > NELMTS(sm_size) failed"); /* Assume entire data space to be printed */ if (ctx->ndims > 0) @@ -1720,22 +1714,22 @@ h5tools_dump_simple_dset(FILE *stream, const h5tool_format_t *info, h5tools_cont HDassert(sm_nbytes == (hsize_t)((size_t)sm_nbytes)); /*check for overflow*/ if (NULL != (sm_buf = (unsigned char *)HDmalloc((size_t)sm_nbytes))) { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "stripmine size:%ld", sm_nbytes); + H5TOOLS_DEBUG("stripmine size:%ld", sm_nbytes); sm_nelmts = sm_nbytes / p_type_nbytes; sm_space = H5Screate_simple(1, &sm_nelmts, NULL); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "sm_nelmts size:%ld", sm_nelmts); + H5TOOLS_DEBUG("sm_nelmts size:%ld", sm_nelmts); if (ctx->ndims > 0) init_acc_pos(ctx, total_size); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ctx->ndims:%d", ctx->ndims); + H5TOOLS_DEBUG("ctx->ndims:%d", ctx->ndims); /* The stripmine loop */ HDmemset(hs_offset, 0, sizeof hs_offset); HDmemset(zero, 0, sizeof zero); for (elmtno = 0; elmtno < p_nelmts; elmtno += hs_nelmts) { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "stripmine read loop:%d", i); + H5TOOLS_DEBUG("stripmine read loop:%d", i); /* Calculate the hyperslab size */ if (ctx->ndims > 0) { for (i = 0, hs_nelmts = 1; i < ctx->ndims; i++) { @@ -1745,19 +1739,19 @@ h5tools_dump_simple_dset(FILE *stream, const h5tool_format_t *info, h5tools_cont } if (H5Sselect_hyperslab(f_space, H5S_SELECT_SET, hs_offset, NULL, hs_size, NULL) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sselect_hyperslab hs_offset failed"); + H5TOOLS_ERROR((-1), "H5Sselect_hyperslab hs_offset failed"); if (H5Sselect_hyperslab(sm_space, H5S_SELECT_SET, zero, NULL, &hs_nelmts, NULL) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sselect_hyperslab zero failed"); + H5TOOLS_ERROR((-1), "H5Sselect_hyperslab zero failed"); } else { if (H5Sselect_all(f_space) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sselect_all f_space failed"); + H5TOOLS_ERROR((-1), "H5Sselect_all f_space failed"); if (H5Sselect_all(sm_space) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sselect_all sm_space failed"); + H5TOOLS_ERROR((-1), "H5Sselect_all sm_space failed"); hs_nelmts = 1; } - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "Read the data"); + H5TOOLS_DEBUG("Read the data"); /* Read the data */ if (H5Dread(dset, p_type, sm_space, f_space, H5P_DEFAULT, sm_buf) >= 0) { /* Print the data */ @@ -1769,13 +1763,13 @@ h5tools_dump_simple_dset(FILE *stream, const h5tool_format_t *info, h5tools_cont ctx->sm_pos = elmtno; if(h5tools_dump_simple_data(stream, info, dset, ctx, flags, hs_nelmts, p_type, sm_buf) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "h5tools_dump_simple_data failed"); + H5TOOLS_ERROR((-1), "h5tools_dump_simple_data failed"); /* Reclaim any VL memory, if necessary */ if (vl_data) H5Treclaim(p_type, sm_space, H5P_DEFAULT, sm_buf); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "Calculate the next hyperslab offset"); + H5TOOLS_DEBUG("Calculate the next hyperslab offset"); /* Calculate the next hyperslab offset */ for (i = ctx->ndims, carry = 1; i > 0 && carry; --i) { ctx->p_min_idx[i - 1] = ctx->p_max_idx[i - 1]; @@ -1788,21 +1782,21 @@ h5tools_dump_simple_dset(FILE *stream, const h5tool_format_t *info, h5tools_cont } } else - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dread failed"); + H5TOOLS_ERROR((-1), "H5Dread failed"); ctx->continuation++; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "stripmine read loop:%d complete", i); + H5TOOLS_DEBUG("stripmine read loop:%d complete", i); } HDfree(sm_buf); } /* if (NULL != (sm_buf...)) */ + done: if(sm_space >= 0 && H5Sclose(sm_space) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sclose failed"); + H5TOOLS_ERROR((-1), "H5Sclose failed"); if(f_space >= 0 && H5Sclose(f_space) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sclose failed"); + H5TOOLS_ERROR((-1), "H5Sclose failed"); CATCH - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit"); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit"); return ret_value; } @@ -1820,31 +1814,31 @@ static int h5tools_dump_simple_mem(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx, hid_t attr_id, hid_t p_type) { - H5TOOLS_ERR_INIT(herr_t, SUCCEED) hid_t f_space = H5I_INVALID_HID; /* file data space */ hsize_t alloc_size; int sndims; /* rank of dataspace */ unsigned i; /* counters */ hsize_t total_size[H5S_MAX_RANK]; /* total size of dataset*/ hsize_t p_nelmts; /* total selected elmts */ - unsigned char *buf = NULL; /* buffer for raw data */ + hbool_t past_catch = FALSE; + unsigned char *buf = NULL; /* buffer for raw data */ + int ret_value = 0; /* VL data special information */ unsigned int vl_data = 0; /* contains VL datatypes */ - H5TOOLS_PUSH_STACK(); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter"); - if (FAIL == (f_space = H5Aget_space(attr_id))) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_space failed"); + H5TOOLS_DEBUG("enter"); + if (H5I_INVALID_HID == (f_space = H5Aget_space(attr_id))) + H5TOOLS_GOTO_ERROR((-1), "H5Dget_space failed"); sndims = H5Sget_simple_extent_ndims(f_space); if(sndims < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Dget_simple_extent_ndims failed"); + H5TOOLS_THROW((-1), "H5Dget_simple_extent_ndims failed"); ctx->ndims = (unsigned)sndims; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "sndims:%d", sndims); + H5TOOLS_DEBUG("sndims:%d", sndims); if ((size_t) ctx->ndims > NELMTS(ctx->p_min_idx)) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "ctx->ndims > NELMTS(ctx->p_min_idx) failed"); + H5TOOLS_THROW((-1), "ctx->ndims > NELMTS(ctx->p_min_idx) failed"); /* Assume entire data space to be printed */ if (ctx->ndims > 0) @@ -1876,28 +1870,27 @@ h5tools_dump_simple_mem(FILE *stream, const h5tool_format_t *info, h5tools_conte if (NULL != (buf = (unsigned char *)HDmalloc((size_t)alloc_size))) { if (ctx->ndims > 0) init_acc_pos(ctx, total_size); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ctx->ndims:%d", ctx->ndims); + H5TOOLS_DEBUG("ctx->ndims:%d", ctx->ndims); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "Read the data"); + H5TOOLS_DEBUG("Read the data"); /* Read the data */ if (H5Aread(attr_id, p_type, buf) >= 0) { if(h5tools_dump_simple_data(stream, info, attr_id, ctx, START_OF_DATA | END_OF_DATA, p_nelmts, p_type, buf) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "h5tools_dump_simple_data failed"); + H5TOOLS_ERROR((-1), "h5tools_dump_simple_data failed"); /* Reclaim any VL memory, if necessary */ if (vl_data) H5Treclaim(p_type, f_space, H5P_DEFAULT, buf); } else - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aread failed"); + H5TOOLS_ERROR((-1), "H5Aread failed"); HDfree(buf); } /* if (NULL != (buf...)) */ done: if(f_space >= 0 && H5Sclose(f_space) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sclose failed"); + H5TOOLS_ERROR((-1), "H5Sclose failed"); CATCH - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit"); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit"); return ret_value; } @@ -1922,12 +1915,13 @@ CATCH int h5tools_dump_dset(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx, hid_t dset) { - H5TOOLS_ERR_INIT(int, SUCCEED) hid_t f_space = H5I_INVALID_HID; hid_t p_type = H5I_INVALID_HID; hid_t f_type = H5I_INVALID_HID; H5S_class_t space_type; h5tool_format_t info_dflt; + int ret_value = 0; + /* Use default values */ if (!stream) stream = rawoutstream; @@ -1979,6 +1973,7 @@ done: if (f_space > 0) H5Sclose(f_space); + H5TOOLS_ENDDEBUG("exit"); return ret_value; } @@ -1996,11 +1991,11 @@ done: int h5tools_dump_mem(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx, hid_t attr_id) { - H5TOOLS_ERR_INIT(int, SUCCEED) hid_t f_space = H5I_INVALID_HID; hid_t p_type = H5I_INVALID_HID; hid_t f_type = H5I_INVALID_HID; h5tool_format_t info_dflt; + int ret_value = 0; /* Use default values */ if (!stream) @@ -2034,7 +2029,7 @@ h5tools_dump_mem(FILE *stream, const h5tool_format_t *info, h5tools_context_t *c /* Check the data space */ if (H5Sis_simple(f_space) <= 0) { - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sis_simple failed"); + H5TOOLS_ERROR((-1), "H5Sis_simple failed"); } else { ret_value = h5tools_dump_simple_mem(rawattrstream, info, ctx, attr_id, p_type); @@ -2047,6 +2042,7 @@ done: if (f_space > 0) H5Sclose(f_space); + H5TOOLS_ENDDEBUG("exit"); return ret_value; } @@ -2065,12 +2061,11 @@ int h5tools_print_datatype(FILE *stream, h5tools_str_t *buffer, const h5tool_format_t *info, h5tools_context_t *ctx, hid_t type, int object_search) { - H5TOOLS_ERR_INIT(int, SUCCEED) char *mname; - hid_t mtype = -1; - hid_t str_type = -1; - hid_t super = -1; - hid_t tmp_type = -1; + hid_t mtype = H5I_INVALID_HID; + hid_t str_type = H5I_INVALID_HID; + hid_t super = H5I_INVALID_HID; + hid_t tmp_type = H5I_INVALID_HID; int snmembers; int sndims; unsigned nmembers; @@ -2085,11 +2080,13 @@ h5tools_print_datatype(FILE *stream, h5tools_str_t *buffer, const h5tool_format_ H5T_class_t type_class; H5T_sign_t sign; /* sign scheme value */ htri_t is_vlstr = FALSE; + hbool_t past_catch = FALSE; const char *sign_s = NULL; /* sign scheme string */ const char *order_s = NULL; /* byte order string */ + int ret_value = 0; if((type_class = H5Tget_class(type)) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Tget_class failed"); + H5TOOLS_THROW((-1), "H5Tget_class failed"); if (object_search && H5Tcommitted(type) > 0) { H5O_info_t oinfo; obj_t *obj = NULL; /* Found object */ @@ -2379,11 +2376,11 @@ h5tools_print_datatype(FILE *stream, h5tools_str_t *buffer, const h5tool_format_ order = H5Tget_order(tmp_type); if(order == H5T_ORDER_LE) { if(H5Tset_order(str_type, H5T_ORDER_LE) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tset_order failed"); + H5TOOLS_ERROR((-1), "H5Tset_order failed"); } /* end if */ else if(order == H5T_ORDER_BE) { if(H5Tset_order(str_type, H5T_ORDER_BE) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tset_order failed"); + H5TOOLS_ERROR((-1), "H5Tset_order failed"); } /* end if */ if(H5Tequal(tmp_type, str_type)) { @@ -2393,7 +2390,7 @@ h5tools_print_datatype(FILE *stream, h5tools_str_t *buffer, const h5tool_format_ /* If not equal to C variable-length string, check Fortran type. */ if(H5Tclose(str_type) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_ERROR((-1), "H5Tclose failed"); str_type = H5Tcopy(H5T_FORTRAN_S1); H5Tset_cset(str_type, cset); @@ -2410,11 +2407,11 @@ h5tools_print_datatype(FILE *stream, h5tools_str_t *buffer, const h5tool_format_ order = H5Tget_order(tmp_type); if(order == H5T_ORDER_LE) { if(H5Tset_order(str_type, H5T_ORDER_LE) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tset_order failed"); + H5TOOLS_ERROR((-1), "H5Tset_order failed"); } /* end if */ else if(order == H5T_ORDER_BE) { if(H5Tset_order(str_type, H5T_ORDER_BE) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tset_order failed"); + H5TOOLS_ERROR((-1), "H5Tset_order failed"); } /* end if */ if(H5Tequal(tmp_type, str_type)) { @@ -2433,9 +2430,9 @@ h5tools_print_datatype(FILE *stream, h5tools_str_t *buffer, const h5tool_format_ h5tools_str_reset(buffer); if(H5Tclose(str_type) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_ERROR((-1), "H5Tclose failed"); if(H5Tclose(tmp_type) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_ERROR((-1), "H5Tclose failed"); h5tools_str_append(buffer, "%s", h5tools_dump_header_format->strblockend); break; @@ -2469,7 +2466,7 @@ h5tools_print_datatype(FILE *stream, h5tools_str_t *buffer, const h5tool_format_ char *ttag; if(NULL == (ttag = H5Tget_tag(type))) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Tget_tag failed"); + H5TOOLS_THROW((-1), "H5Tget_tag failed"); ctx->need_prefix = TRUE; @@ -2497,7 +2494,7 @@ h5tools_print_datatype(FILE *stream, h5tools_str_t *buffer, const h5tool_format_ case H5T_COMPOUND: if((snmembers = H5Tget_nmembers(type)) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Tget_nmembers failed"); + H5TOOLS_THROW((-1), "H5Tget_nmembers failed"); nmembers = (unsigned)snmembers; h5tools_str_append(buffer, "H5T_COMPOUND %s", h5tools_dump_header_format->structblockbegin); @@ -2515,10 +2512,10 @@ h5tools_print_datatype(FILE *stream, h5tools_str_t *buffer, const h5tool_format_ h5tools_str_append(buffer, " \"%s\";", mname); h5tools_render_element(stream, info, ctx, buffer, &curr_pos, (size_t)ncols, (hsize_t)0, (hsize_t)0); if(H5Tclose(mtype) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_ERROR((-1), "H5Tclose failed"); } else - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tget_member_type failed"); + H5TOOLS_ERROR((-1), "H5Tget_member_type failed"); H5free_memory(mname); } ctx->indent_level--; @@ -2547,7 +2544,7 @@ h5tools_print_datatype(FILE *stream, h5tools_str_t *buffer, const h5tool_format_ case H5T_ENUM: if((super = H5Tget_super(type)) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Tget_super failed"); + H5TOOLS_THROW((-1), "H5Tget_super failed"); h5tools_str_append(buffer, "H5T_ENUM %s", h5tools_dump_header_format->enumblockbegin); h5tools_render_element(stream, info, ctx, buffer, &curr_pos, (size_t)ncols, (hsize_t)0, (hsize_t)0); @@ -2559,7 +2556,7 @@ h5tools_print_datatype(FILE *stream, h5tools_str_t *buffer, const h5tool_format_ h5tools_print_datatype(stream, buffer, info, ctx, super, TRUE); if(H5Tclose(super) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_ERROR((-1), "H5Tclose failed"); h5tools_str_append(buffer, ";"); h5tools_render_element(stream, info, ctx, buffer, &curr_pos, (size_t)ncols, (hsize_t)0, (hsize_t)0); @@ -2577,14 +2574,14 @@ h5tools_print_datatype(FILE *stream, h5tools_str_t *buffer, const h5tool_format_ case H5T_VLEN: if((super = H5Tget_super(type)) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Tget_super failed"); + H5TOOLS_THROW((-1), "H5Tget_super failed"); h5tools_str_append(buffer, "H5T_VLEN %s ", h5tools_dump_header_format->vlenblockbegin); h5tools_print_datatype(stream, buffer, info, ctx, super, TRUE); if(H5Tclose(super) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_ERROR((-1), "H5Tclose failed"); h5tools_str_append(buffer, "%s", h5tools_dump_header_format->vlenblockend); @@ -2605,10 +2602,10 @@ h5tools_print_datatype(FILE *stream, h5tools_str_t *buffer, const h5tool_format_ h5tools_str_append(buffer, " "); } else - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tget_array_dims2 failed"); + H5TOOLS_ERROR((-1), "H5Tget_array_dims2 failed"); } else - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tget_array_ndims failed"); + H5TOOLS_ERROR((-1), "H5Tget_array_ndims failed"); /* Get array base type */ if((super = H5Tget_super(type)) >= 0) { @@ -2616,10 +2613,10 @@ h5tools_print_datatype(FILE *stream, h5tools_str_t *buffer, const h5tool_format_ h5tools_print_datatype(stream, buffer, info, ctx, super, TRUE); /* Close array base type */ if(H5Tclose(super) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_ERROR((-1), "H5Tclose failed"); } else - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tget_super failed"); + H5TOOLS_ERROR((-1), "H5Tget_super failed"); h5tools_str_append(buffer, " }"); @@ -2632,7 +2629,10 @@ h5tools_print_datatype(FILE *stream, h5tools_str_t *buffer, const h5tool_format_ break; } +done: + CATCH + H5TOOLS_ENDDEBUG("exit"); return ret_value; } @@ -2650,18 +2650,19 @@ CATCH int h5tools_print_dataspace(h5tools_str_t *buffer, hid_t space) { - H5TOOLS_ERR_INIT(int, SUCCEED) hsize_t size[H5TOOLS_DUMP_MAX_RANK]; hsize_t maxsize[H5TOOLS_DUMP_MAX_RANK]; int ndims = -1; H5S_class_t space_type = -1; + hbool_t past_catch = FALSE; int i; + int ret_value = 0; if((ndims = H5Sget_simple_extent_dims(space, size, maxsize)) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Sget_simple_extent_dims failed"); + H5TOOLS_THROW((-1), "H5Sget_simple_extent_dims failed"); if((space_type = H5Sget_simple_extent_type(space)) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Sget_simple_extent_type failed"); + H5TOOLS_THROW((-1), "H5Sget_simple_extent_type failed"); switch(space_type) { case H5S_SCALAR: @@ -2708,6 +2709,7 @@ h5tools_print_dataspace(h5tools_str_t *buffer, hid_t space) } /* end switch */ CATCH + H5TOOLS_ENDDEBUG("exit"); return ret_value; } @@ -2726,34 +2728,35 @@ CATCH int h5tools_print_enum(FILE *stream, h5tools_str_t *buffer, const h5tool_format_t *info, h5tools_context_t *ctx, hid_t type) { - H5TOOLS_ERR_INIT(int, SUCCEED) char **name = NULL; /*member names */ unsigned char *value = NULL; /*value array */ unsigned char *copy = NULL; /*a pointer to value array */ unsigned i; unsigned nmembs = 0; /*number of members */ int snmembs; - hid_t super = -1; /*enum base integer type */ - hid_t native = -1; /*native integer datatype */ + hid_t super = H5I_INVALID_HID; /*enum base integer type */ + hid_t native = H5I_INVALID_HID; /*native integer datatype */ H5T_sign_t sign_type; /*sign of value type */ size_t type_size; /*value type size */ size_t dst_size; /*destination value type size */ size_t ncols = 80; /*available output width */ hsize_t curr_pos = 0; /* total data element position */ + hbool_t past_catch = FALSE; + int ret_value = 0; if (info->line_ncols > 0) ncols = info->line_ncols; if((snmembs = H5Tget_nmembers(type)) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Tget_nmembers failed"); + H5TOOLS_THROW((-1), "H5Tget_nmembers failed"); nmembs = (unsigned)snmembs; HDassert(nmembs > 0); if((super = H5Tget_super(type)) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Tget_super failed"); + H5TOOLS_THROW((-1), "H5Tget_super failed"); if((type_size = H5Tget_size(type)) <= 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Tget_size(type) failed"); + H5TOOLS_THROW((-1), "H5Tget_size(type) failed"); /* * Determine what datatype to use for the native values. To simplify @@ -2766,7 +2769,7 @@ h5tools_print_enum(FILE *stream, h5tools_str_t *buffer, const h5tool_format_t *i dst_size = sizeof(long long); if((sign_type = H5Tget_sign(type))<0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Tget_sign failed"); + H5TOOLS_THROW((-1), "H5Tget_sign failed"); if(H5T_SGN_NONE == sign_type) native = H5T_NATIVE_ULLONG; else @@ -2777,20 +2780,20 @@ h5tools_print_enum(FILE *stream, h5tools_str_t *buffer, const h5tool_format_t *i /* Get the names and raw values of all members */ if(NULL == (name = (char **)HDcalloc((size_t)nmembs, sizeof(char *)))) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "Could not allocate buffer for member name"); + H5TOOLS_THROW((-1), "Could not allocate buffer for member name"); if(NULL == (value = (unsigned char *)HDcalloc((size_t)nmembs, MAX(type_size, dst_size)))) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "Could not allocate buffer for member value"); + H5TOOLS_THROW((-1), "Could not allocate buffer for member value"); for (i = 0; i < nmembs; i++) { name[i] = H5Tget_member_name(type, i); if(H5Tget_member_value(type, i, value + i * type_size) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Tget_member_value failed"); + H5TOOLS_THROW((-1), "H5Tget_member_value failed"); } /* Convert values to native datatype */ if (native > 0) if(H5Tconvert(super, native, (size_t)nmembs, value, NULL, H5P_DEFAULT) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "H5Tconvert failed"); + H5TOOLS_THROW((-1), "H5Tconvert failed"); /* * Sort members by increasing value @@ -2847,11 +2850,12 @@ CATCH HDfree(value); if(super >= 0 && H5Tclose(super) < 0) - H5TOOLS_THROW(FAIL, H5E_tools_min_id_g, "Could not close datatype's super class"); + H5TOOLS_THROW((-1), "Could not close datatype's super class"); if(0 == nmembs) h5tools_str_append(buffer, "\n<empty>"); + H5TOOLS_ENDDEBUG("exit"); return ret_value; } @@ -3070,7 +3074,7 @@ h5tools_print_fill_value(h5tools_str_t *buffer/*in,out*/, const h5tool_format_t h5tools_context_t *ctx/*in,out*/, hid_t dcpl, hid_t type_id, hid_t obj_id) { size_t size; - hid_t n_type = -1; + hid_t n_type = H5I_INVALID_HID; void *buf = NULL; n_type = H5Tget_native_type(type_id, H5T_DIR_DEFAULT); @@ -3772,8 +3776,8 @@ h5tools_dump_attribute(FILE *stream, const h5tool_format_t *info, h5tools_contex error_msg("unable to open attribute \"%s\"\n", attr_name); } else { - hid_t type = -1; - hid_t space = -1; + hid_t type = H5I_INVALID_HID; + hid_t space = H5I_INVALID_HID; ctx->indent_level++; @@ -3966,7 +3970,6 @@ h5tools_dump_subsetting_header(FILE *stream, const h5tool_format_t *info, h5tool void h5tools_dump_data(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx, hid_t obj_id, int obj_data) { - H5TOOLS_ERR_INIT(int, SUCCEED) H5S_class_t space_type; int ndims; size_t i; @@ -3985,9 +3988,8 @@ h5tools_dump_data(FILE *stream, const h5tool_format_t *info, h5tools_context_t * h5tool_format_t outputformat; H5R_ref_t *ref_buf = NULL; - H5TOOLS_PUSH_STACK(); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter file=%p", (void*)stream); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "rawdata file=%p", (void*)rawdatastream); + H5TOOLS_DEBUG("enter file=%p", (void*)stream); + H5TOOLS_DEBUG("rawdata file=%p", (void*)rawdatastream); /* setup */ HDmemset(&buffer, 0, sizeof(h5tools_str_t)); if (info->line_ncols > 0) @@ -3999,12 +4001,12 @@ h5tools_dump_data(FILE *stream, const h5tool_format_t *info, h5tools_context_t * string_dataformat.pindex = ctx->display_index; if(obj_data) { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "dataset"); + H5TOOLS_DEBUG("dataset"); f_type = H5Dget_type(obj_id); space = H5Dget_space(obj_id); } else { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "attribute"); + H5TOOLS_DEBUG("attribute"); f_type = H5Aget_type(obj_id); space = H5Aget_space(obj_id); } @@ -4032,13 +4034,13 @@ h5tools_dump_data(FILE *stream, const h5tool_format_t *info, h5tools_context_t * if (H5Tget_class(f_type) == H5T_REFERENCE) { ctx->indent_level++; datactx = *ctx; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "reference class type"); + H5TOOLS_DEBUG("reference class type"); if (!H5Tequal(f_type, H5T_STD_REF) && !H5Tequal(f_type, H5T_STD_REF_DSETREG) && !H5Tequal(f_type, H5T_STD_REF_OBJ)) { - HGOTO_DONE(SUCCEED); + H5TOOLS_GOTO_DONE_NO_RET(); } ndims = (int)H5Sget_simple_extent_npoints(space); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ndims=%d - datactx.ndims=%d", ndims, datactx.ndims); + H5TOOLS_DEBUG("ndims=%d - datactx.ndims=%d", ndims, datactx.ndims); /* Assume entire data space to be printed */ if (datactx.ndims > 0) @@ -4054,31 +4056,33 @@ h5tools_dump_data(FILE *stream, const h5tool_format_t *info, h5tools_context_t * if(obj_data) { if(H5Dread(obj_id, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, ref_buf) < 0) { HDfree(ref_buf); - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dread reference failed"); + H5TOOLS_INFO("H5Dread reference failed"); + H5TOOLS_GOTO_DONE_NO_RET(); } } else { if(H5Aread(obj_id, H5T_STD_REF, ref_buf) < 0) { HDfree(ref_buf); - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aread reference failed"); + H5TOOLS_INFO("H5Aread reference failed"); + H5TOOLS_GOTO_DONE_NO_RET(); } } for(i = 0; i < ndims; i++, datactx.cur_elmt++, elmt_counter++) { - H5O_type_t obj_type; /* Object type */ + H5O_type_t obj_type = -1; /* Object type */ H5R_type_t ref_type; /* Reference type */ - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "reference loop:%d with curr_pos=%ld", i, curr_pos); + H5TOOLS_DEBUG("reference loop:%d with curr_pos=%ld", i, curr_pos); datactx.need_prefix = TRUE; h5tools_str_reset(&buffer); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "reference loop - h5tools_str_sprint with H5T_STD_REF:%d", i); + H5TOOLS_DEBUG("reference loop - h5tools_str_sprint with H5T_STD_REF:%d", i); h5tools_str_sprint(&buffer, &outputformat, obj_id, H5T_STD_REF, &ref_buf[i], &datactx); h5tools_render_element(stream, &outputformat, &datactx, &buffer, &curr_pos, (size_t)ncols, (hsize_t)i, (hsize_t)ndims); ref_type = H5Rget_type((const H5R_ref_t *)&ref_buf[i]); switch (ref_type) { case H5R_OBJECT1: - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ref_type is H5R_OBJECT1"); + H5TOOLS_DEBUG("ref_type is H5R_OBJECT1"); if (H5Rget_obj_type3((const H5R_ref_t *)&ref_buf[i], H5P_DEFAULT, &obj_type) >= 0) { switch (obj_type) { case H5O_TYPE_DATASET: @@ -4087,12 +4091,10 @@ h5tools_dump_data(FILE *stream, const h5tool_format_t *info, h5tools_context_t * h5tools_dump_data(stream, &outputformat, &datactx, new_obj_id, TRUE); datactx.indent_level--; if(H5Dclose(new_obj_id) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dclose H5R_OBJECT1:H5O_TYPE_DATASET failed"); - if(H5Rdestroy(&ref_buf[i]) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rdestroy H5R_OBJECT1:H5O_TYPE_DATASET failed"); + H5TOOLS_INFO("H5Dclose H5R_OBJECT1:H5O_TYPE_DATASET failed"); } else - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Ropen_object H5R_OBJECT1:H5O_TYPE_DATASET failed"); + H5TOOLS_INFO("H5Ropen_object H5R_OBJECT1:H5O_TYPE_DATASET failed"); break; case H5O_TYPE_GROUP: @@ -4105,24 +4107,22 @@ h5tools_dump_data(FILE *stream, const h5tool_format_t *info, h5tools_context_t * } /* end switch */ } else - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rget_obj_type3 H5R_OBJECT1 failed"); + H5TOOLS_INFO("H5Rget_obj_type3 H5R_OBJECT1 failed"); break; case H5R_DATASET_REGION1: - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ref_type is H5R_DATASET_REGION1"); + H5TOOLS_DEBUG("ref_type is H5R_DATASET_REGION1"); if((new_obj_id = H5Ropen_object((const H5R_ref_t *)&ref_buf[i], H5P_DEFAULT, H5P_DEFAULT)) >= 0) { datactx.indent_level++; h5tools_dump_data(stream, &outputformat, &datactx, new_obj_id, TRUE); datactx.indent_level--; if(H5Dclose(new_obj_id) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dclose H5R_DATASET_REGION1 failed"); - if(H5Rdestroy(&ref_buf[i]) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rdestroy H5R_DATASET_REGION1 failed"); + H5TOOLS_INFO("H5Dclose H5R_DATASET_REGION1 failed"); } else - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Ropen_object H5R_DATASET_REGION1 failed"); + H5TOOLS_INFO("H5Ropen_object H5R_DATASET_REGION1 failed"); break; case H5R_OBJECT2: - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ref_type is H5R_OBJECT2"); + H5TOOLS_DEBUG("ref_type is H5R_OBJECT2"); if (H5Rget_obj_type3((const H5R_ref_t *)&ref_buf[i], H5P_DEFAULT, &obj_type) >= 0) { switch (obj_type) { case H5O_TYPE_GROUP: @@ -4134,12 +4134,10 @@ h5tools_dump_data(FILE *stream, const h5tool_format_t *info, h5tools_context_t * h5tools_dump_data(stream, &outputformat, &datactx, new_obj_id, TRUE); datactx.indent_level--; if(H5Oclose(new_obj_id) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Oclose H5R_OBJECT2 failed"); - if(H5Rdestroy(&ref_buf[i]) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rdestroy H5R_OBJECT2 failed"); + H5TOOLS_INFO("H5Oclose H5R_OBJECT2 failed"); } else - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Ropen_object H5R_OBJECT2 failed"); + H5TOOLS_INFO("H5Ropen_object H5R_OBJECT2 failed"); break; case H5O_TYPE_NAMED_DATATYPE: @@ -4153,22 +4151,21 @@ h5tools_dump_data(FILE *stream, const h5tool_format_t *info, h5tools_context_t * } /* end switch */ } else - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rget_obj_type3 H5R_OBJECT2 failed"); + H5TOOLS_INFO("H5Rget_obj_type3 H5R_OBJECT2 failed"); break; case H5R_DATASET_REGION2: - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ref_type is H5R_DATASET_REGION2"); + H5TOOLS_DEBUG("ref_type is H5R_DATASET_REGION2"); if (outputformat.line_ncols > 0) ncols = outputformat.line_ncols; /* if (new_obj_id < 0) - could mean that no reference was written do not throw failure */ if((new_obj_id = H5Ropen_object((const H5R_ref_t *)&ref_buf[i], H5P_DEFAULT, H5P_DEFAULT)) < 0) - H5Epush2(H5tools_ERR_STACK_g, __FILE__, FUNC, __LINE__, H5tools_ERR_CLS_g, H5E_tools_g, H5E_tools_min_id_g, - "H5Ropen_object H5R_DATASET_REGION2 failed"); + H5TOOLS_INFO("H5Ropen_object H5R_DATASET_REGION2 failed"); else { if((new_obj_sid = H5Ropen_region((const H5R_ref_t *)&ref_buf[i], H5P_DEFAULT, H5P_DEFAULT)) >= 0) { if (h5tools_is_zero(&ref_buf[i], H5Tget_size(H5T_STD_REF))) { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "NULL H5R_DATASET_REGION2"); + H5TOOLS_DEBUG("NULL H5R_DATASET_REGION2"); h5tools_str_reset(&buffer); h5tools_str_append(&buffer, " {"); @@ -4194,42 +4191,38 @@ h5tools_dump_data(FILE *stream, const h5tool_format_t *info, h5tools_context_t * region_type = H5Sget_select_type(new_obj_sid); if(region_type == H5S_SEL_POINTS) { /* Print point information */ - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5S_SEL_POINTS H5R_DATASET_REGION2"); + H5TOOLS_DEBUG("H5S_SEL_POINTS H5R_DATASET_REGION2"); h5tools_dump_region_data_points(new_obj_sid, new_obj_id, stream, &outputformat, &datactx, &buffer, &curr_pos, ncols, i, elmt_counter); } else if(region_type == H5S_SEL_HYPERSLABS) { /* Print block information */ - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5S_SEL_HYPERSLABS H5R_DATASET_REGION2"); + H5TOOLS_DEBUG("H5S_SEL_HYPERSLABS H5R_DATASET_REGION2"); h5tools_dump_region_data_blocks(new_obj_sid, new_obj_id, stream, &outputformat, &datactx, &buffer, &curr_pos, ncols, i, elmt_counter); } else - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "invalid region type"); + H5TOOLS_INFO("invalid region type"); } /* end else to if (h5tools_is_zero(... */ if(H5Sclose(new_obj_sid) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sclose H5R_DATASET_REGION2 failed"); + H5TOOLS_INFO("H5Sclose H5R_DATASET_REGION2 failed"); } else - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Ropen_region H5R_DATASET_REGION2 failed"); + H5TOOLS_INFO("H5Ropen_region H5R_DATASET_REGION2 failed"); if(H5Dclose(new_obj_id) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dclose H5R_DATASET_REGION2 failed"); - if(H5Rdestroy(&ref_buf[i]) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rdestroy H5R_DATASET_REGION2 failed"); + H5TOOLS_INFO("H5Dclose H5R_DATASET_REGION2 failed"); } break; case H5R_ATTR: - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ref_type is H5R_ATTR"); + H5TOOLS_DEBUG("ref_type is H5R_ATTR"); if((new_obj_id = H5Ropen_attr((const H5R_ref_t *)&ref_buf[i], H5P_DEFAULT, H5P_DEFAULT)) >= 0) { h5tools_dump_region_attribute(new_obj_id, stream, &outputformat, &datactx, &buffer, &curr_pos, ncols, i, elmt_counter); if(H5Aclose(new_obj_id) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aclose H5R_ATTR failed"); - if(H5Rdestroy(&ref_buf[i]) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rdestroy H5R_ATTR failed"); + H5TOOLS_INFO("H5Aclose H5R_ATTR failed"); } else { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "NULL H5R_ATTR"); + H5TOOLS_DEBUG("NULL H5R_ATTR"); h5tools_str_reset(&buffer); h5tools_str_append(&buffer, " {"); @@ -4251,7 +4244,7 @@ h5tools_dump_data(FILE *stream, const h5tool_format_t *info, h5tools_context_t * h5tools_str_append(&buffer, "}"); h5tools_render_element(stream, &outputformat, &datactx, &buffer, &curr_pos, (size_t)ncols, (hsize_t)0, (hsize_t)0); - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Ropen_attr H5R_ATTR failed"); + H5TOOLS_INFO("H5Ropen_attr H5R_ATTR failed"); } break; case H5R_BADTYPE: @@ -4260,18 +4253,21 @@ h5tools_dump_data(FILE *stream, const h5tool_format_t *info, h5tools_context_t * break; } /* end switch */ - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "finished reference loop:%d",i); + if(H5Rdestroy(&ref_buf[i]) < 0) + H5TOOLS_INFO("H5Rdestroy failed"); + + H5TOOLS_DEBUG("finished reference loop:%d",i); } /* end for(i = 0; i < ndims; i++, datactx->cur_elmt++, elmt_counter++) */ HDfree(ref_buf); } ctx->indent_level--; } else { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "Print all the values"); + H5TOOLS_DEBUG("Print all the values"); datactx = *ctx; string_dataformat = *info; if((datactx.display_char && H5Tget_size(f_type) == 1) && (H5Tget_class(f_type) == H5T_INTEGER)) { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "Print 1-byte integer data as an ASCII character string"); + H5TOOLS_DEBUG("Print 1-byte integer data as an ASCII character string"); /* * Print 1-byte integer data as an ASCII character string * instead of integers if the `-r' or `--string' command-line @@ -4298,7 +4294,7 @@ h5tools_dump_data(FILE *stream, const h5tool_format_t *info, h5tools_context_t * /* Print all the values. */ if(obj_data) { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "h5tools_dump_dset"); + H5TOOLS_DEBUG("h5tools_dump_dset"); status = h5tools_dump_dset(stream, &string_dataformat, &datactx, obj_id); } else { @@ -4308,12 +4304,12 @@ h5tools_dump_data(FILE *stream, const h5tool_format_t *info, h5tools_context_t * status = SUCCEED; } else { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "call h5tools_dump_mem"); + H5TOOLS_DEBUG("call h5tools_dump_mem"); status = h5tools_dump_mem(stream, &string_dataformat, &datactx, obj_id); } } if (datactx.display_char && H5Tget_size(f_type) == 1 && H5Tget_class(f_type) == H5T_INTEGER) { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "Print 1-byte integer data as an ASCII character string eol=%s",string_dataformat.line_suf); + H5TOOLS_DEBUG("Print 1-byte integer data as an ASCII character string eol=%s",string_dataformat.line_suf); datactx.need_prefix = FALSE; string_dataformat.arr_linebreak = 0; string_dataformat.idx_fmt = ""; @@ -4323,7 +4319,7 @@ h5tools_dump_data(FILE *stream, const h5tool_format_t *info, h5tools_context_t * h5tools_str_append(&buffer, "\""); h5tools_render_element(stream, &string_dataformat, &datactx, &buffer, &curr_pos, (size_t)ncols, (hsize_t)0, (hsize_t)0); } - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "Print all the values Complete"); + H5TOOLS_DEBUG("Print all the values Complete"); if (status == FAIL) { error_msg("unable to print data\n"); @@ -4366,7 +4362,6 @@ done: } h5tools_str_close(&buffer); - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit"); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit"); } diff --git a/tools/lib/h5tools_error.h b/tools/lib/h5tools_error.h index 2c5e6c9..784b86a 100644 --- a/tools/lib/h5tools_error.h +++ b/tools/lib/h5tools_error.h @@ -22,7 +22,9 @@ /* tools-HDF5 Error variables */ H5TOOLS_DLLVAR hid_t H5tools_ERR_STACK_g; +H5TOOLS_DLLVAR hid_t H5tools_DBG_ERR_STACK_g; H5TOOLS_DLLVAR hid_t H5tools_ERR_CLS_g; +H5TOOLS_DLLVAR hid_t H5tools_DBG_ERR_CLS_g; H5TOOLS_DLLVAR hid_t H5E_tools_g; H5TOOLS_DLLVAR hid_t H5E_tools_min_id_g; H5TOOLS_DLLVAR hid_t H5E_tools_min_info_id_g; @@ -40,89 +42,194 @@ H5TOOLS_DLLVAR hid_t H5E_tools_min_dbg_id_g; /* * H5TOOLS_INIT_ERROR macro, used to initialize error reporting. */ -#define H5TOOLS_INIT_ERROR() { \ - H5tools_ERR_CLS_g = H5Eregister_class("H5tools", "HDF5:tools", lib_str); \ - H5E_tools_g = H5Ecreate_msg(H5tools_ERR_CLS_g, H5E_MAJOR, "Failure in tools library"); \ - H5E_tools_min_id_g = H5Ecreate_msg(H5tools_ERR_CLS_g, H5E_MINOR, "error in function"); \ - H5E_tools_min_info_id_g = H5Ecreate_msg(H5tools_ERR_CLS_g, H5E_MINOR, "function info"); \ - H5E_tools_min_dbg_id_g = H5Ecreate_msg(H5tools_ERR_CLS_g, H5E_MINOR, "function debug"); \ -} +#define H5TOOLS_INIT_ERROR() \ +do { \ + char lib_str[256]; \ + \ + /* Initialize library version string for error class */ \ + HDsnprintf(lib_str, sizeof(lib_str), "%d.%d.%d", H5_VERS_MAJOR, H5_VERS_MINOR, H5_VERS_RELEASE); \ + \ + /* Create new HDF5 error stack for the tools to use */ \ + if ((H5tools_ERR_STACK_g = H5Ecreate_stack()) < 0) \ + HDfprintf(stderr, "Failed to create HDF5 tools error stack\n"); \ + \ + /* Create new HDF5 error stack for debugging, if tools debugging is enabled */ \ + H5TOOLS_CREATE_DEBUG_STACK(); \ + \ + /* Register errors from the HDF5 tools as a new error class */ \ + if ((H5tools_ERR_CLS_g = H5Eregister_class("H5tools", "HDF5:tools", lib_str)) < 0) \ + HDfprintf(stderr, "Failed to register HDF5 tools error class\n"); \ + \ + /* Create a new HDF5 major error message for errors from the tools library */ \ + if ((H5E_tools_g = H5Ecreate_msg(H5tools_ERR_CLS_g, H5E_MAJOR, "Failure in tools library")) < 0) \ + HDfprintf(stderr, "Failed to register major error message for tools library errors\n"); \ + \ + /* Create a new HDF5 minor error message for errors from the tools library */ \ + if ((H5E_tools_min_id_g = H5Ecreate_msg(H5tools_ERR_CLS_g, H5E_MINOR, "error in function")) < 0) \ + HDfprintf(stderr, "Failed to register minor error message for tools library errors\n"); \ + \ + /* Create a new HDF5 minor error message for info messages from the tools library */ \ + if ((H5E_tools_min_info_id_g = H5Ecreate_msg(H5tools_ERR_CLS_g, H5E_MINOR, "function info")) < 0) \ + HDfprintf(stderr, "Failed to register minor error message for tools library info messages\n"); \ + \ + /* Create a new HDF5 minor error message for debug messages from the tools library */ \ + if ((H5E_tools_min_dbg_id_g = H5Ecreate_msg(H5tools_ERR_CLS_g, H5E_MINOR, "function debug")) < 0) \ + HDfprintf(stderr, "Failed to register minor error message for tools library debug messages\n"); \ +} while(0) /* - * H5TOOLS_CLOSE_ERROR macro, used to initialize error reporting. + * H5TOOLS_CLOSE_ERROR macro, used to terminate error reporting. */ -#define H5TOOLS_CLOSE_ERROR() { \ - H5Eclose_msg(H5E_tools_min_dbg_id_g); \ - H5Eclose_msg(H5E_tools_min_info_id_g); \ - H5Eclose_msg(H5E_tools_min_id_g); \ - H5Eclose_msg(H5E_tools_g); \ - H5Eunregister_class(H5tools_ERR_CLS_g); \ -} +#define H5TOOLS_CLOSE_ERROR() \ +do { \ + /* Close all error messages created by H5TOOLS_INIT_ERROR() */ \ + if (H5Eclose_msg(H5E_tools_min_dbg_id_g) < 0) \ + HDfprintf(stderr, "Failed to close minor error message for tools library debug messages\n"); \ + if (H5Eclose_msg(H5E_tools_min_info_id_g) < 0) \ + HDfprintf(stderr, "Failed to close minor error message for tools library info messages\n"); \ + if (H5Eclose_msg(H5E_tools_min_id_g) < 0) \ + HDfprintf(stderr, "Failed to close minor error message for tools library errors\n"); \ + if (H5Eclose_msg(H5E_tools_g) < 0) \ + HDfprintf(stderr, "Failed to close major error message for tools library errors\n"); \ + \ + /* Unregister the HDF5 tools error class */ \ + if (H5Eunregister_class(H5tools_ERR_CLS_g) < 0) \ + HDfprintf(stderr, "Failed to unregister the HDF5 tools error class\n"); \ + \ + /* Close the tools debugging error stack, if it was created */ \ + H5TOOLS_CLOSE_DEBUG_STACK(); \ + \ + /* Close the tools error stack */ \ + if (H5Eclose_stack(H5tools_ERR_STACK_g) < 0) \ + HDfprintf(stderr, "Failed to close HDF5 tools error stack\n"); \ +} while(0) /* - * H5TOOLS_ERR_INIT macro, used to facilitate error reporting. Declaration and assignments of error variables. - * Use at the beginning of a function using error handling macros. + * H5TOOLS_PUSH_ERROR macro, used to push an error to an error stack. Not meant to + * be called directly. */ -#define H5TOOLS_ERR_INIT(ret_typ, ret_init) \ - hid_t pstack_id = H5I_INVALID_HID; \ - hid_t estack_id = H5tools_ERR_STACK_g; \ - hbool_t past_catch = FALSE; \ - ret_typ ret_value = ret_init; +#define H5TOOLS_PUSH_ERROR(estack_id, err_cls, maj_err_id, min_err_id, ...) \ +do { \ + if (estack_id >= 0 && err_cls >= 0) \ + H5Epush2(estack_id, __FILE__, FUNC, __LINE__, err_cls, maj_err_id, min_err_id, __VA_ARGS__); \ + else { \ + HDfprintf(stderr, __VA_ARGS__); \ + HDfprintf(stderr, "\n"); \ + } \ +} while(0) /* - * H5TOOLS_PUSH_STACK macro, used to create a new error stack. + * H5TOOLS_ERROR macro, used to facilitate error reporting within a function body. + * The arguments are the return value and an error string. The return value is assigned + * to a variable `ret_value'. This macro is meant to be used for reporting an error without + * having control branch to the `done' label. This is often used when an error occurs + * after the `done' label, in which case an infinite loop would ensue if control branched + * backwards. */ -#define H5TOOLS_PUSH_STACK() { \ - pstack_id = estack_id; \ - estack_id = H5Ecreate_stack(); \ -} +#define H5TOOLS_ERROR(ret_val, ...) \ +do { \ + H5TOOLS_PUSH_ERROR(H5tools_ERR_STACK_g, H5tools_ERR_CLS_g, H5E_tools_g, H5E_tools_min_id_g, __VA_ARGS__); \ + ret_value = ret_val; \ +} while(0) /* - * H5TOOLS_POP_STACK macro, used to release a new error stack. + * H5TOOLS_GOTO_ERROR macro, used to facilitate error reporting within a function body. + * The arguments are the return value and an error string. The return value is assigned + * to a variable `ret_value' and control branches to the `done' label. */ -#define H5TOOLS_POP_STACK() { \ - if (H5I_INVALID_HID != pstack_id) { \ - H5Eclose_stack(estack_id); \ - estack_id = pstack_id; \ - pstack_id = H5I_INVALID_HID; \ - } \ -} +#define H5TOOLS_GOTO_ERROR(ret_val, ...) \ +do { \ + H5TOOLS_PUSH_ERROR(H5tools_ERR_STACK_g, H5tools_ERR_CLS_g, H5E_tools_g, H5E_tools_min_id_g, __VA_ARGS__); \ + H5TOOLS_GOTO_DONE(ret_val); \ +} while(0) /* - * H5TOOLS_DEBUG macro, used to facilitate error reporting. The arguments are the minor error number, and a description of the error. + * H5TOOLS_GOTO_DONE macro, used to facilitate normal return within a function body. + * The argument is the return value which is assigned to the `ret_value' + * variable. Control branches to the `done' label. */ -#ifdef H5_TOOLS_DEBUG -#define H5TOOLS_DEBUG(min_id, ...) { \ - H5Epush2(estack_id, __FILE__, FUNC, __LINE__, H5tools_ERR_CLS_g, H5E_tools_g, min_id, __VA_ARGS__); \ -} -#define H5TOOLS_ENDDEBUG(min_id, ...) { \ - H5Epush2(estack_id, __FILE__, FUNC, __LINE__, H5tools_ERR_CLS_g, H5E_tools_g, min_id, __VA_ARGS__); \ - H5Eprint2(estack_id, stderr); \ -} -#else -#define H5TOOLS_DEBUG(min_id, ...) { \ - ; \ -} -#define H5TOOLS_ENDDEBUG(min_id, ...) { \ - ; \ -} -#endif +#define H5TOOLS_GOTO_DONE(ret_val) \ +do { \ + ret_value = ret_val; \ + goto done; \ +} while(0) /* - * H5TOOLS_INFO macro, used to facilitate error reporting . The arguments are the minor error number, and a description of the error. + * H5TOOLS_GOTO_DONE_NO_RET macro, used to facilitate normal return within a function body. + * Control simply branches to the `done' label without setting any return value. */ -#define H5TOOLS_INFO(min_id, ...) { \ - H5Epush2(H5tools_ERR_STACK_g, __FILE__, FUNC, __LINE__, H5tools_ERR_CLS_g, H5E_tools_g, min_id, __VA_ARGS__); \ -} +#define H5TOOLS_GOTO_DONE_NO_RET() \ +do { \ + goto done; \ +} while(0) /* - * H5TOOLS_ERROR macro, used to facilitate error reporting . The arguments are the major - * error number, the minor error number, and a description of the error. + * H5TOOLS_INFO macro, used to facilitate error reporting. The arguments are + * a description of the error. */ -#define H5TOOLS_ERROR(maj_id, min_id, ...) { \ - H5Epush2(H5tools_ERR_STACK_g, __FILE__, FUNC, __LINE__, H5tools_ERR_CLS_g, maj_id, min_id, __VA_ARGS__); \ - ret_value = FAIL; \ -} +#define H5TOOLS_INFO(...) \ +do { \ + H5TOOLS_PUSH_ERROR(H5tools_ERR_STACK_g, H5tools_ERR_CLS_g, H5E_tools_g, H5E_tools_min_info_id_g, __VA_ARGS__); \ +} while(0) + +#ifdef H5_TOOLS_DEBUG + +#define H5TOOLS_CREATE_DEBUG_STACK() \ +do { \ + /* Create new HDF5 error stack for debugging */ \ + if ((H5tools_DBG_ERR_STACK_g = H5Ecreate_stack()) < 0) \ + HDfprintf(stderr, "Failed to create HDF5 tools debugging error stack\n"); \ + \ + /* Register debugging output from the HDF5 tools as a new error class */ \ + if ((H5tools_DBG_ERR_CLS_g = H5Eregister_class("H5tools-debug", "HDF5:tools", lib_str)) < 0) \ + HDfprintf(stderr, "Failed to register HDF5 tools debugging error class\n"); \ +} while(0) + +#define H5TOOLS_CLOSE_DEBUG_STACK() \ +do { \ + /* Unregister the HDF5 tools debugging error class */ \ + if (H5Eunregister_class(H5tools_DBG_ERR_CLS_g) < 0) \ + HDfprintf(stderr, "Failed to unregister the HDF5 tools debugging error class\n"); \ + \ + /* Close the tools debugging error stack */ \ + if (H5Eclose_stack(H5tools_DBG_ERR_STACK_g) < 0) \ + HDfprintf(stderr, "Failed to close HDF5 tools debugging error stack\n"); \ +} while(0) + +#define H5TOOLS_DEBUG(...) \ +do { \ + H5TOOLS_PUSH_ERROR(H5tools_DBG_ERR_STACK_g, H5tools_DBG_ERR_CLS_g, H5E_tools_g, H5E_tools_min_dbg_id_g, __VA_ARGS__); \ +} while(0) + +#define H5TOOLS_ENDDEBUG(...) \ +do { \ + H5TOOLS_PUSH_ERROR(H5tools_DBG_ERR_STACK_g, H5tools_DBG_ERR_CLS_g, H5E_tools_g, H5E_tools_min_dbg_id_g, __VA_ARGS__); \ + H5Eprint2(H5tools_DBG_ERR_STACK_g, stderr); \ +} while(0) + +#else + +#define H5TOOLS_CREATE_DEBUG_STACK() \ +do { \ + ; \ +} while(0) + +#define H5TOOLS_CLOSE_DEBUG_STACK() \ +do { \ + ; \ +} while(0) + +#define H5TOOLS_DEBUG(...) \ +do { \ + ; \ +} while(0) + +#define H5TOOLS_ENDDEBUG(...) \ +do { \ + ; \ +} while(0) + +#endif /* Macro for "catching" flow of control when an error occurs. Note that the @@ -151,28 +258,11 @@ H5TOOLS_DLLVAR hid_t H5E_tools_min_dbg_id_g; * The return value is assigned to a variable `ret_value' and control branches * to the `catch_except' label, if we're not already past it. */ -#define H5TOOLS_THROW(fail_value, min_id, ...) { \ - H5Epush2(H5tools_ERR_STACK_g, __FILE__, FUNC, __LINE__, H5tools_ERR_CLS_g, H5E_tools_g, min_id, __VA_ARGS__); \ - H5_LEAVE(fail_value) \ -} - -/* - * H5TOOLS_GOTO_ERROR macro, used to facilitate error reporting within a function body. The arguments are - * the major error number, the minor error number, the return value, and an - * error string. The return value is assigned to a variable `ret_value' and - * control branches to the `done' label. - */ -#define H5TOOLS_GOTO_ERROR(fail_value, min_id, ...) { \ - H5TOOLS_ERROR(H5E_tools_g, min_id, __VA_ARGS__); \ - HGOTO_DONE(fail_value) \ -} - -/* - * HGOTO_DONE macro, used to facilitate normal return within a function body. - * The argument is the return value which is assigned to the `ret_value' - * variable. Control branches to the `done' label. - */ -/* #define HGOTO_DONE(ret_val) {ret_value = ret_val; goto done;} defined in H5Eprivate.h */ +#define H5TOOLS_THROW(ret_val, ...) \ +do { \ + H5TOOLS_PUSH_ERROR(H5tools_ERR_STACK_g, H5tools_ERR_CLS_g, H5E_tools_g, H5E_tools_min_id_g, __VA_ARGS__); \ + H5_LEAVE(ret_val) \ +} while(0) #endif /* H5TOOLS_ERROR_H_ */ diff --git a/tools/lib/h5tools_filters.c b/tools/lib/h5tools_filters.c index aafc7ba..0e4c476 100644 --- a/tools/lib/h5tools_filters.c +++ b/tools/lib/h5tools_filters.c @@ -43,24 +43,24 @@ int h5tools_canreadf(const char* name, /* object name, serves also as boolean print */ hid_t dcpl_id) /* dataset creation property list */ { - int ret_value = 1; int nfilters; /* number of filters */ H5Z_filter_t filtn; /* filter identification number */ int i; /* index */ int udfilter_avail; /* index */ + int ret_value = 1; /* get information about filters */ if ((nfilters = H5Pget_nfilters(dcpl_id)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_nfilters failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Pget_nfilters failed"); /* if we do not have filters, we can read the dataset safely */ if (!nfilters) - HGOTO_DONE(1); + H5TOOLS_GOTO_DONE(1); /* check availability of filters */ for (i = 0; i < nfilters; i++) { if ((filtn = H5Pget_filter2(dcpl_id, (unsigned) i, 0, 0, 0, (size_t) 0, 0, NULL)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_filter2 failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Pget_filter2 failed"); switch (filtn) { /*------------------------------------------------------------------------- @@ -69,7 +69,7 @@ h5tools_canreadf(const char* name, /* object name, serves also as boolean pr */ default: if ((udfilter_avail = H5Zfilter_avail(filtn)) < 0) { - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Zfilter_avail failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Zfilter_avail failed"); } else if (!udfilter_avail) { if (name) @@ -149,41 +149,42 @@ h5tools_can_encode(H5Z_filter_t filtn) switch (filtn) { /* user defined filter */ default: - HGOTO_DONE(0) + H5TOOLS_GOTO_DONE(0); + break; case H5Z_FILTER_DEFLATE: #ifndef H5_HAVE_FILTER_DEFLATE - HGOTO_DONE(0) + H5TOOLS_GOTO_DONE(0); #endif break; case H5Z_FILTER_SZIP: #ifndef H5_HAVE_FILTER_SZIP - HGOTO_DONE(0) + H5TOOLS_GOTO_DONE(0); #else { unsigned int filter_config_flags; if (H5Zget_filter_info(filtn, &filter_config_flags) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Zget_filter_info failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Zget_filter_info failed"); if ((filter_config_flags & (H5Z_FILTER_CONFIG_ENCODE_ENABLED | H5Z_FILTER_CONFIG_DECODE_ENABLED)) == 0) { /* filter present but neither encode nor decode is supported (???) */ - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "neither encode nor decode is supported"); + H5TOOLS_GOTO_ERROR(FAIL, "neither encode nor decode is supported"); } else if ((filter_config_flags & (H5Z_FILTER_CONFIG_ENCODE_ENABLED | H5Z_FILTER_CONFIG_DECODE_ENABLED)) == H5Z_FILTER_CONFIG_DECODE_ENABLED) { /* decoder only: read but not write */ - HGOTO_DONE(0) + H5TOOLS_GOTO_DONE(0); } else if ((filter_config_flags & (H5Z_FILTER_CONFIG_ENCODE_ENABLED | H5Z_FILTER_CONFIG_DECODE_ENABLED)) == H5Z_FILTER_CONFIG_ENCODE_ENABLED) { /* encoder only: write but not read (???) */ - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "encoder only: write but not read"); + H5TOOLS_GOTO_ERROR(FAIL, "encoder only: write but not read"); } else if ((filter_config_flags & (H5Z_FILTER_CONFIG_ENCODE_ENABLED | H5Z_FILTER_CONFIG_DECODE_ENABLED)) == (H5Z_FILTER_CONFIG_ENCODE_ENABLED | H5Z_FILTER_CONFIG_DECODE_ENABLED)) { - HGOTO_DONE(1) + H5TOOLS_GOTO_DONE(1); } } #endif diff --git a/tools/lib/h5tools_str.c b/tools/lib/h5tools_str.c index f35fdab..0aa5152 100644 --- a/tools/lib/h5tools_str.c +++ b/tools/lib/h5tools_str.c @@ -289,27 +289,25 @@ char * h5tools_str_prefix(h5tools_str_t *str/*in,out*/, const h5tool_format_t *info, hsize_t elmtno, unsigned ndims, h5tools_context_t *ctx) { - H5TOOLS_ERR_INIT(int, SUCCEED) size_t i = 0; hsize_t curr_pos = elmtno; - H5TOOLS_PUSH_STACK(); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter"); + H5TOOLS_DEBUG("enter"); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "elmtno=%ld, ctx->ndims=%d", elmtno, ctx->ndims); + H5TOOLS_DEBUG("elmtno=%ld, ctx->ndims=%d", elmtno, ctx->ndims); h5tools_str_reset(str); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ndims=%d", ndims); + H5TOOLS_DEBUG("ndims=%d", ndims); if(ndims > 0) { /* * Calculate the number of elements represented by a unit change in a * certain index position. */ for(i = 0; i < (size_t) ndims; i++) { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "curr_pos=%ld - ctx->acc[%d]=%ld", curr_pos, i, ctx->acc[i]); + H5TOOLS_DEBUG("curr_pos=%ld - ctx->acc[%d]=%ld", curr_pos, i, ctx->acc[i]); ctx->pos[i] = curr_pos / ctx->acc[i]; curr_pos -= ctx->acc[i] * ctx->pos[i]; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "curr_pos=%ld - ctx->pos[%d]=%ld - ctx->acc[%d]=%ld", curr_pos, i, ctx->pos[i], i, ctx->acc[i]); + H5TOOLS_DEBUG("curr_pos=%ld - ctx->pos[%d]=%ld - ctx->acc[%d]=%ld", curr_pos, i, ctx->pos[i], i, ctx->acc[i]); } HDassert(curr_pos == 0); @@ -325,10 +323,9 @@ h5tools_str_prefix(h5tools_str_t *str/*in,out*/, const h5tool_format_t *info, } else /* Scalar */ h5tools_str_append(str, OPT(info->idx_n_fmt, HSIZE_T_FORMAT), (hsize_t)elmtno); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "str=%s", str->s); + H5TOOLS_DEBUG("str=%s", str->s); - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit"); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit"); /* Add prefix and suffix to the index */ return h5tools_str_fmt(str, (size_t)0, OPT(info->idx_fmt, "%s: ")); @@ -684,7 +681,6 @@ char * h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t container, hid_t type, void *vp, h5tools_context_t *ctx) { - H5TOOLS_ERR_INIT(char*, NULL) size_t nsize, offset, size=0, nelmts, start; H5T_sign_t nsign; char *name = NULL; @@ -695,9 +691,9 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai static char fmt_llong[8], fmt_ullong[8]; H5T_str_t pad; H5T_class_t type_class; + char *ret_value = NULL; - H5TOOLS_PUSH_STACK(); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter"); + H5TOOLS_DEBUG("enter"); /* Build default formats for long long types */ if(!fmt_llong[0]) { HDsnprintf(fmt_llong, sizeof(fmt_llong), "%%%sd", H5_PRINTF_LL_WIDTH); @@ -726,7 +722,7 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai return NULL; switch (type_class) { case H5T_FLOAT: - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5T_FLOAT"); + H5TOOLS_DEBUG("H5T_FLOAT"); if(sizeof(float) == nsize) { /* if (H5Tequal(type, H5T_NATIVE_FLOAT)) */ float tempfloat; @@ -758,7 +754,7 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai char quote = '\0'; char *s; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5T_STRING"); + H5TOOLS_DEBUG("H5T_STRING"); quote = '\0'; if(H5Tis_variable_str(type)) { /* cp_vp is the pointer into the struct where a `char*' is stored. So we have @@ -833,7 +829,7 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai break; case H5T_INTEGER: - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5T_INTEGER"); + H5TOOLS_DEBUG("H5T_INTEGER"); if(sizeof(char) == nsize) { if(info->ascii) h5tools_print_char(str, info, (char) (*ucp_vp)); @@ -971,7 +967,7 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai break; case H5T_COMPOUND: - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5T_COMPOUND"); + H5TOOLS_DEBUG("H5T_COMPOUND"); if(ctx->cmpd_listv) { /* there is <list_of_fields> */ unsigned save_indent_level; /* The indentation level */ size_t curr_field; /* Current field to display */ @@ -1073,7 +1069,7 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai { char enum_name[1024]; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5T_ENUM"); + H5TOOLS_DEBUG("H5T_ENUM"); if(H5Tenum_nameof(type, vp, enum_name, sizeof enum_name) >= 0) h5tools_str_append(str, h5tools_escape(enum_name, sizeof(enum_name))); else { @@ -1088,16 +1084,16 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai break; case H5T_REFERENCE: - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5T_REFERENCE"); + H5TOOLS_DEBUG("H5T_REFERENCE"); if(h5tools_str_is_zero(vp, nsize)) h5tools_str_append(str, "NULL"); else { if (H5Tequal(type, H5T_STD_REF)) { - H5O_type_t obj_type; /* Object type */ + H5O_type_t obj_type = -1; /* Object type */ H5R_type_t ref_type; /* Reference type */ const H5R_ref_t *ref_vp = (const H5R_ref_t *)vp; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5T_REFERENCE:H5T_STD_REF"); + H5TOOLS_DEBUG("H5T_REFERENCE:H5T_STD_REF"); ref_type = H5Rget_type(ref_vp); H5Rget_obj_type3(ref_vp, H5P_DEFAULT, &obj_type); switch (ref_type) { @@ -1106,16 +1102,14 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai /* Object references -- show the type and OID of the referenced object. */ H5O_info_t oi; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ref_type is H5R_OBJECT1"); + H5TOOLS_DEBUG("ref_type is H5R_OBJECT1"); if((obj = H5Ropen_object(ref_vp, H5P_DEFAULT, H5P_DEFAULT)) >= 0) { H5Oget_info2(obj, &oi, H5O_INFO_BASIC); if(H5Oclose(obj) < 0) - H5Epush2(H5tools_ERR_STACK_g, __FILE__, FUNC, __LINE__, H5tools_ERR_CLS_g, H5E_tools_g, H5E_tools_min_id_g, - "H5Oclose H5R_OBJECT1 failed"); + H5TOOLS_ERROR(NULL, "H5Oclose H5R_OBJECT1 failed"); } else - H5Epush2(H5tools_ERR_STACK_g, __FILE__, FUNC, __LINE__, H5tools_ERR_CLS_g, H5E_tools_g, H5E_tools_min_id_g, - "H5Ropen_object H5R_OBJECT1 failed"); + H5TOOLS_ERROR(NULL, "H5Ropen_object H5R_OBJECT1 failed"); /* Print object type and close object */ switch (obj_type) { @@ -1135,7 +1129,7 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai case H5O_TYPE_UNKNOWN: case H5O_TYPE_NTYPES: default: - h5tools_str_append(str, "%u-", (unsigned) oi.type); + h5tools_str_append(str, "%u-%s", (unsigned) oi.type, H5_TOOLS_UNKNOWN); break; } /* end switch */ H5Oclose(obj); @@ -1149,12 +1143,12 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai } break; case H5R_DATASET_REGION1: - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ref_type is H5R_DATASET_REGION1"); + H5TOOLS_DEBUG("ref_type is H5R_DATASET_REGION1"); h5tools_str_append(str, H5_TOOLS_DATASET); h5tools_str_sprint_reference(str, info, container, ref_vp); break; case H5R_OBJECT2: - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ref_type is H5R_OBJECT2"); + H5TOOLS_DEBUG("ref_type is H5R_OBJECT2"); switch (obj_type) { case H5O_TYPE_GROUP: h5tools_str_append(str, H5_TOOLS_GROUP); @@ -1172,17 +1166,18 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai case H5O_TYPE_UNKNOWN: case H5O_TYPE_NTYPES: default: + h5tools_str_append(str, H5_TOOLS_UNKNOWN); break; } /* end switch */ h5tools_str_sprint_reference(str, info, container, ref_vp); break; case H5R_DATASET_REGION2: - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ref_type is H5R_DATASET_REGION2"); + H5TOOLS_DEBUG("ref_type is H5R_DATASET_REGION2"); h5tools_str_append(str, H5_TOOLS_DATASET); h5tools_str_sprint_reference(str, info, container, ref_vp); break; case H5R_ATTR: - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ref_type is H5R_ATTR"); + H5TOOLS_DEBUG("ref_type is H5R_ATTR"); h5tools_str_append(str, H5_TOOLS_ATTRIBUTE); h5tools_str_sprint_reference(str, info, container, ref_vp); break; @@ -1191,15 +1186,15 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai default: break; } /* end switch */ - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5T_REFERENCE:H5T_STD_REF end"); + H5TOOLS_DEBUG("H5T_REFERENCE:H5T_STD_REF end"); } else if (H5Tequal(type, H5T_STD_REF_DSETREG)) { /* if(nsize == H5R_DSET_REG_REF_BUF_SIZE) */ - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5T_REFERENCE:H5T_STD_REF_DSETREG"); + H5TOOLS_DEBUG("H5T_REFERENCE:H5T_STD_REF_DSETREG"); } else if (H5Tequal(type, H5T_STD_REF_OBJ)) { /* if (nsize == H5R_OBJ_REF_BUF_SIZE) */ - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5T_REFERENCE:H5T_STD_REF_OBJ"); + H5TOOLS_DEBUG("H5T_REFERENCE:H5T_STD_REF_OBJ"); } /* end else if (H5Tequal(type, H5T_STD_REF_OBJ)) */ } break; @@ -1210,7 +1205,7 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai hsize_t i, dims[H5S_MAX_RANK], temp_nelmts; static int is_next_arry_elmt = 0; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5T_ARRAY"); + H5TOOLS_DEBUG("H5T_ARRAY"); /* Get the array's base datatype for each element */ memb = H5Tget_super(type); size = H5Tget_size(memb); @@ -1272,7 +1267,7 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai { unsigned int i; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5T_VLEN"); + H5TOOLS_DEBUG("H5T_VLEN"); /* Get the VL sequences's base datatype for each element */ memb = H5Tget_super(type); size = H5Tget_size(memb); @@ -1319,9 +1314,10 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai case H5T_BITFIELD: case H5T_OPAQUE: { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "OTHER"); /* All other types get printed as hexadecimal */ size_t i; + + H5TOOLS_DEBUG("OTHER"); if(1 == nsize) h5tools_str_append(str, "0x%02x", ucp_vp[0]); else @@ -1337,11 +1333,11 @@ h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t contai break; } /* end switch */ } -CATCH + +done: ret_value = h5tools_str_fmt(str, start, OPT(info->elmt_fmt, "%s")); - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit with %s", ret_value); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit with %s", ret_value); return ret_value; } @@ -1358,32 +1354,30 @@ void h5tools_str_sprint_reference(h5tools_str_t *str, const h5tool_format_t *info, hid_t container, H5R_ref_t *ref_vp) { - H5TOOLS_ERR_INIT(int, SUCCEED) - ssize_t buf_size; + ssize_t buf_size; - H5TOOLS_PUSH_STACK(); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter"); + H5TOOLS_DEBUG("enter"); h5tools_str_append(str, " \""); buf_size = H5Rget_file_name(ref_vp, NULL, 0); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "buf_size=%ld", buf_size); + H5TOOLS_DEBUG("buf_size=%ld", buf_size); if (buf_size) { char *file_name = (char *)HDmalloc(sizeof(char) * (size_t)buf_size + 1); if (H5Rget_file_name(ref_vp, file_name, buf_size + 1) >= 0) { file_name[buf_size] = '\0'; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "name=%s", file_name); + H5TOOLS_DEBUG("name=%s", file_name); h5tools_str_append(str, "%s", file_name); } HDfree(file_name); } buf_size = H5Rget_obj_name(ref_vp, H5P_DEFAULT, NULL, 0); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "buf_size=%ld", buf_size); + H5TOOLS_DEBUG("buf_size=%ld", buf_size); if (buf_size) { char *obj_name = (char *)HDmalloc(sizeof(char) * (size_t)buf_size + 1); if (H5Rget_obj_name(ref_vp, H5P_DEFAULT, obj_name, buf_size + 1) >= 0) { obj_name[buf_size] = '\0'; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "name=%s", obj_name); + H5TOOLS_DEBUG("name=%s", obj_name); h5tools_str_append(str, "%s", obj_name); } HDfree(obj_name); @@ -1391,12 +1385,12 @@ h5tools_str_sprint_reference(h5tools_str_t *str, const h5tool_format_t *info, if (H5Rget_type(ref_vp) == H5R_ATTR) { buf_size = H5Rget_attr_name(ref_vp, NULL, 0); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "buf_size=%ld", buf_size); + H5TOOLS_DEBUG("buf_size=%ld", buf_size); if (buf_size) { char *attr_name = (char *)HDmalloc(sizeof(char) * (size_t)buf_size + 1); if (H5Rget_attr_name(ref_vp, attr_name, buf_size + 1) >= 0) { attr_name[buf_size] = '\0'; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "name=%s", attr_name); + H5TOOLS_DEBUG("name=%s", attr_name); h5tools_str_append(str, "/%s", attr_name); } HDfree(attr_name); @@ -1404,9 +1398,7 @@ h5tools_str_sprint_reference(h5tools_str_t *str, const h5tool_format_t *info, } h5tools_str_append(str, "\""); -CATCH - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit"); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit"); } /*------------------------------------------------------------------------- diff --git a/tools/lib/h5tools_type.c b/tools/lib/h5tools_type.c index f63c228..22e4a39 100644 --- a/tools/lib/h5tools_type.c +++ b/tools/lib/h5tools_type.c @@ -26,7 +26,7 @@ hid_t h5tools_get_little_endian_type(hid_t tid) { - hid_t p_type=-1; + hid_t p_type=H5I_INVALID_HID; H5T_class_t type_class; size_t size; H5T_sign_t sign; @@ -106,7 +106,7 @@ h5tools_get_little_endian_type(hid_t tid) hid_t h5tools_get_big_endian_type(hid_t tid) { - hid_t p_type = -1; + hid_t p_type = H5I_INVALID_HID; H5T_class_t type_class; size_t size; H5T_sign_t sign; diff --git a/tools/lib/h5tools_utils.c b/tools/lib/h5tools_utils.c index 7b47f4d..323c9b3 100644 --- a/tools/lib/h5tools_utils.c +++ b/tools/lib/h5tools_utils.c @@ -721,7 +721,7 @@ find_objs_cb(const char *name, const H5O_info_t *oinfo, const char *already_seen case H5O_TYPE_DATASET: if(NULL == already_seen) { - hid_t dset = -1; + hid_t dset = H5I_INVALID_HID; /* Add the dataset to the list of objects */ add_obj(info->dset_table, oinfo->addr, name, TRUE); @@ -803,7 +803,7 @@ init_objs(hid_t fid, find_objs_t *info, table_t **group_table, /* Find all shared objects */ if((ret_value = h5trav_visit(fid, "/", TRUE, TRUE, find_objs_cb, NULL, info, H5O_INFO_BASIC)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "finding shared objects failed") + H5TOOLS_GOTO_ERROR(FAIL, "finding shared objects failed"); done: /* Release resources */ @@ -904,39 +904,39 @@ H5tools_get_symlink_info(hid_t file_id, const char * linkpath, h5tool_link_info_ /* if path is root, return group type */ if(!HDstrcmp(linkpath,"/")) { link_info->trg_type = H5O_TYPE_GROUP; - HGOTO_DONE(2); + H5TOOLS_GOTO_DONE(2); } /* check if link itself exist */ if(H5Lexists(file_id, linkpath, H5P_DEFAULT) <= 0) { if(link_info->opt.msg_mode == 1) parallel_print("Warning: link <%s> doesn't exist \n",linkpath); - HGOTO_DONE(FAIL); + H5TOOLS_GOTO_DONE(FAIL); } /* end if */ /* get info from link */ if(H5Lget_info(file_id, linkpath, &(link_info->linfo), H5P_DEFAULT) < 0) { if(link_info->opt.msg_mode == 1) parallel_print("Warning: unable to get link info from <%s>\n",linkpath); - HGOTO_DONE(FAIL); + H5TOOLS_GOTO_DONE(FAIL); } /* end if */ /* given path is hard link (object) */ if(link_info->linfo.type == H5L_TYPE_HARD) - HGOTO_DONE(2); + H5TOOLS_GOTO_DONE(2); /* trg_path must be freed out of this function when finished using */ if((link_info->trg_path = (char*)HDcalloc(link_info->linfo.u.val_size, sizeof(char))) == NULL) { if(link_info->opt.msg_mode == 1) parallel_print("Warning: unable to allocate buffer for <%s>\n",linkpath); - HGOTO_DONE(FAIL); + H5TOOLS_GOTO_DONE(FAIL); } /* end if */ /* get link value */ if(H5Lget_val(file_id, linkpath, (void *)link_info->trg_path, link_info->linfo.u.val_size, H5P_DEFAULT) < 0) { if(link_info->opt.msg_mode == 1) parallel_print("Warning: unable to get link value from <%s>\n",linkpath); - HGOTO_DONE(FAIL); + H5TOOLS_GOTO_DONE(FAIL); } /* end if */ /*----------------------------------------------------- @@ -945,13 +945,13 @@ H5tools_get_symlink_info(hid_t file_id, const char * linkpath, h5tool_link_info_ */ if(link_info->linfo.type == H5L_TYPE_EXTERNAL) { if((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) - HGOTO_DONE(FAIL); + H5TOOLS_GOTO_DONE(FAIL); if(H5Pset_fapl_sec2(fapl) < 0) - HGOTO_DONE(FAIL); + H5TOOLS_GOTO_DONE(FAIL); if((lapl = H5Pcreate(H5P_LINK_ACCESS)) < 0) - HGOTO_DONE(FAIL); + H5TOOLS_GOTO_DONE(FAIL); if(H5Pset_elink_fapl(lapl, fapl) < 0) - HGOTO_DONE(FAIL); + H5TOOLS_GOTO_DONE(FAIL); } /* end if */ /* Check for retrieving object info */ @@ -964,24 +964,24 @@ H5tools_get_symlink_info(hid_t file_id, const char * linkpath, h5tool_link_info_ /* detect dangling link */ if(l_ret == FALSE) { - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(0); } else if(l_ret < 0) { /* function failed */ - HGOTO_DONE(FAIL); + H5TOOLS_GOTO_DONE(FAIL); } /* get target object info */ if(H5Oget_info_by_name2(file_id, linkpath, &trg_oinfo, H5O_INFO_BASIC, lapl) < 0) { if(link_info->opt.msg_mode == 1) parallel_print("Warning: unable to get object information for <%s>\n", linkpath); - HGOTO_DONE(FAIL); + H5TOOLS_GOTO_DONE(FAIL); } /* end if */ /* check unknown type */ if(trg_oinfo.type < H5O_TYPE_GROUP || trg_oinfo.type >=H5O_TYPE_NTYPES) { if(link_info->opt.msg_mode == 1) parallel_print("Warning: target object of <%s> is unknown type\n", linkpath); - HGOTO_DONE(FAIL); + H5TOOLS_GOTO_DONE(FAIL); } /* end if */ /* set target obj type to return */ @@ -1049,14 +1049,14 @@ h5tools_getenv_update_hyperslab_bufsize(void) { const char *env_str = NULL; long hyperslab_bufsize_mb; - int ret_value = 1; + int ret_value = 1; /* check if environment variable is set for the hyperslab buffer size */ if (NULL != (env_str = HDgetenv ("H5TOOLS_BUFSIZE"))) { errno = 0; hyperslab_bufsize_mb = HDstrtol(env_str, (char**)NULL, 10); if (errno != 0 || hyperslab_bufsize_mb <= 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "hyperslab buffer size failed"); + H5TOOLS_GOTO_ERROR(FAIL, "hyperslab buffer size failed"); /* convert MB to byte */ H5TOOLS_BUFSIZE = (hsize_t)hyperslab_bufsize_mb * 1024 * 1024; diff --git a/tools/lib/h5trav.c b/tools/lib/h5trav.c index 4f4f42a..fb768a4 100644 --- a/tools/lib/h5trav.c +++ b/tools/lib/h5trav.c @@ -114,7 +114,7 @@ h5trav_set_verbose(int print_verbose) *------------------------------------------------------------------------- */ - + /*------------------------------------------------------------------------- * Function: trav_addr_add * @@ -140,7 +140,7 @@ trav_addr_add(trav_addr_t *visited, haddr_t addr, const char *path) visited->objs[idx].path = HDstrdup(path); } /* end trav_addr_add() */ - + /*------------------------------------------------------------------------- * Function: trav_addr_visited * @@ -164,7 +164,7 @@ trav_addr_visited(trav_addr_t *visited, haddr_t addr) return(NULL); } /* end trav_addr_visited() */ - + /*------------------------------------------------------------------------- * Function: traverse_cb * @@ -239,7 +239,7 @@ traverse_cb(hid_t loc_id, const char *path, const H5L_info_t *linfo, return(H5_ITER_CONT); } /* end traverse_cb() */ - + /*------------------------------------------------------------------------- * Function: traverse * @@ -255,11 +255,11 @@ traverse(hid_t file_id, const char *grp_name, hbool_t visit_start, hbool_t recurse, const trav_visitor_t *visitor, unsigned fields) { H5O_info_t oinfo; /* Object info for starting group */ - int ret_value = SUCCEED; + int ret_value = 0; /* Get info for starting object */ if(H5Oget_info_by_name2(file_id, grp_name, &oinfo, fields, H5P_DEFAULT) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Oget_info_by_name failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Oget_info_by_name failed"); /* Visit the starting object */ if(visit_start && visitor->visit_obj) @@ -289,12 +289,12 @@ traverse(hid_t file_id, const char *grp_name, hbool_t visit_start, if(recurse) { /* Visit all links in group, recursively */ if(H5Lvisit_by_name(file_id, grp_name, trav_index_by, trav_index_order, traverse_cb, &udata, H5P_DEFAULT) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Lvisit_by_name failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Lvisit_by_name failed"); } /* end if */ else { /* Iterate over links in group */ if(H5Literate_by_name(file_id, grp_name, trav_index_by, trav_index_order, NULL, traverse_cb, &udata, H5P_DEFAULT) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Literate_by_name failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Literate_by_name failed"); } /* end else */ /* Free visited addresses table */ @@ -312,7 +312,7 @@ done: return ret_value; } - + /*------------------------------------------------------------------------- * Function: trav_info_add * @@ -366,7 +366,7 @@ trav_fileinfo_add(trav_info_t *info, hid_t loc_id) info->paths[idx].fileno = oinfo.fileno; } /* end trav_fileinfo_add() */ - + /*------------------------------------------------------------------------- * Function: trav_info_visit_obj * @@ -396,7 +396,7 @@ trav_info_visit_obj(const char *path, const H5O_info_t *oinfo, return(0); } /* end trav_info_visit_obj() */ - + /*------------------------------------------------------------------------- * Function: trav_info_visit_lnk * @@ -415,7 +415,7 @@ trav_info_visit_lnk(const char *path, const H5L_info_t *linfo, void *udata) return(0); } /* end trav_info_visit_lnk() */ - + /*------------------------------------------------------------------------- * Function: h5trav_getinfo * @@ -430,7 +430,7 @@ int h5trav_getinfo(hid_t file_id, trav_info_t *info) { trav_visitor_t info_visitor; /* Visitor structure for trav_info_t's */ - int ret_value = SUCCEED; + int ret_value = 0; /* Init visitor structure */ info_visitor.visit_obj = trav_info_visit_obj; @@ -439,7 +439,7 @@ h5trav_getinfo(hid_t file_id, trav_info_t *info) /* Traverse all objects in the file, visiting each object & link */ if(traverse(file_id, "/", TRUE, TRUE, &info_visitor, H5O_INFO_BASIC) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "traverse failed"); + H5TOOLS_GOTO_ERROR((-1), "traverse failed"); done: return ret_value; @@ -501,7 +501,7 @@ trav_info_init(const char *filename, hid_t fileid, trav_info_t **_info) *_info = info; } /* end trav_info_init() */ - + /*------------------------------------------------------------------------- * Function: trav_info_free * @@ -536,7 +536,7 @@ trav_info_free(trav_info_t *info) *------------------------------------------------------------------------- */ - + /*------------------------------------------------------------------------- * Function: trav_table_visit_obj * @@ -563,7 +563,7 @@ trav_table_visit_obj(const char *path, const H5O_info_t *oinfo, return 0; } /* end trav_table_visit_obj() */ - + /*------------------------------------------------------------------------- * Function: trav_table_visit_lnk * @@ -582,7 +582,7 @@ trav_table_visit_lnk(const char *path, const H5L_info_t H5_ATTR_UNUSED *linfo, v return 0; } /* end trav_table_visit_lnk() */ - + /*------------------------------------------------------------------------- * Function: h5trav_gettable * @@ -596,7 +596,7 @@ int h5trav_gettable(hid_t fid, trav_table_t *table) { trav_visitor_t table_visitor; /* Visitor structure for trav_table_t's */ - int ret_value = SUCCEED; + int ret_value = 0; /* Init visitor structure */ table_visitor.visit_obj = trav_table_visit_obj; @@ -605,7 +605,7 @@ h5trav_gettable(hid_t fid, trav_table_t *table) /* Traverse all objects in the file, visiting each object & link */ if(traverse(fid, "/", TRUE, TRUE, &table_visitor, H5O_INFO_BASIC) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "traverse failed"); + H5TOOLS_GOTO_ERROR((-1), "traverse failed"); done: return ret_value; @@ -834,8 +834,8 @@ trav_attr(hid_t #ifdef H5TRAV_PRINT_SPACE } else { - hid_t attr = -1; - hid_t space = -1; + hid_t attr = H5I_INVALID_HID; + hid_t space = H5I_INVALID_HID; hsize_t size[H5S_MAX_RANK]; int ndims; int i; @@ -882,7 +882,7 @@ trav_attr(hid_t return(0); } - + /*------------------------------------------------------------------------- * Function: trav_print_visit_obj * @@ -940,7 +940,7 @@ trav_print_visit_obj(const char *path, const H5O_info_t *oinfo, return(0); } /* end trav_print_visit_obj() */ - + /*------------------------------------------------------------------------- * Function: trav_print_visit_lnk * @@ -1004,7 +1004,7 @@ trav_print_visit_lnk(const char *path, const H5L_info_t *linfo, void *udata) return(0); } /* end trav_print_visit_lnk() */ - + /*------------------------------------------------------------------------- * Function: h5trav_print * @@ -1019,7 +1019,7 @@ h5trav_print(hid_t fid) { trav_print_udata_t print_udata; /* User data for traversal */ trav_visitor_t print_visitor; /* Visitor structure for printing objects */ - int ret_value = SUCCEED; + int ret_value = 0; /* Init user data for printing */ print_udata.fid = fid; @@ -1031,13 +1031,13 @@ h5trav_print(hid_t fid) /* Traverse all objects in the file, visiting each object & link */ if(traverse(fid, "/", TRUE, TRUE, &print_visitor, H5O_INFO_BASIC) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "traverse failed"); + H5TOOLS_GOTO_ERROR(FAIL, "traverse failed"); done: return ret_value; } - + /*------------------------------------------------------------------------- * Function: h5trav_visit * @@ -1053,7 +1053,7 @@ h5trav_visit(hid_t fid, const char *grp_name, hbool_t visit_start, void *udata, unsigned fields) { trav_visitor_t visitor; /* Visitor structure for objects */ - int ret_value = SUCCEED; + int ret_value = 0; /* Init visitor structure */ visitor.visit_obj = visit_obj; @@ -1062,7 +1062,7 @@ h5trav_visit(hid_t fid, const char *grp_name, hbool_t visit_start, /* Traverse all objects in the file, visiting each object & link */ if(traverse(fid, grp_name, visit_start, recurse, &visitor, fields) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "traverse failed"); + H5TOOLS_GOTO_ERROR((-1), "traverse failed"); done: return ret_value; @@ -1080,8 +1080,8 @@ done: herr_t symlink_visit_add(symlink_trav_t *visited, H5L_type_t type, const char *file, const char *path) { - herr_t ret_value = SUCCEED; - size_t idx; /* Index of address to use */ + size_t idx; /* Index of address to use */ + herr_t ret_value = SUCCEED; /* Allocate space if necessary */ if(visited->nused == visited->nalloc) { @@ -1089,7 +1089,7 @@ symlink_visit_add(symlink_trav_t *visited, H5L_type_t type, const char *file, co visited->nalloc = MAX(1, visited->nalloc * 2); if(NULL == (tmp_ptr = HDrealloc(visited->objs, visited->nalloc * sizeof(symlink_trav_path_t)))) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "visited data structure realloc failed"); + H5TOOLS_GOTO_ERROR(FAIL, "visited data structure realloc failed"); visited->objs = (symlink_trav_path_t *)tmp_ptr; } /* end if */ @@ -1103,7 +1103,7 @@ symlink_visit_add(symlink_trav_t *visited, H5L_type_t type, const char *file, co if(type == H5L_TYPE_EXTERNAL) { if(NULL == (visited->objs[idx].file = HDstrdup(file))) { visited->nused--; - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "visited data structure name allocation failed"); + H5TOOLS_GOTO_ERROR(FAIL, "visited data structure name allocation failed"); } /* end if */ } /* end if */ @@ -1111,14 +1111,14 @@ symlink_visit_add(symlink_trav_t *visited, H5L_type_t type, const char *file, co visited->nused--; if(visited->objs[idx].file) HDfree (visited->objs[idx].file); - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "visited data structure path allocation failed"); + H5TOOLS_GOTO_ERROR(FAIL, "visited data structure path allocation failed"); } /* end if */ done: return ret_value; } /* end symlink_visit_add() */ - + /*------------------------------------------------------------------------- * Function: symlink_is_visited * diff --git a/tools/lib/io_timer.c b/tools/lib/io_timer.c index cb89019..472824b 100644 --- a/tools/lib/io_timer.c +++ b/tools/lib/io_timer.c @@ -138,43 +138,43 @@ io_time_set(io_time_t *pt, timer_type t, int start_stop) switch(pt->type){ #ifdef H5_HAVE_PARALLEL case MPI_CLOCK: - if (start_stop == TSTART) { - pt->mpi_timer[t] = MPI_Wtime(); - - /* When we start the timer for HDF5_FINE_WRITE_FIXED_DIMS or HDF5_FINE_READ_FIXED_DIMS - * we compute the time it took to only open the file */ - if(t == HDF5_FINE_WRITE_FIXED_DIMS) - pt->total_time[HDF5_FILE_WRITE_OPEN] += pt->mpi_timer[t] - pt->mpi_timer[HDF5_GROSS_WRITE_FIXED_DIMS]; - else if(t == HDF5_FINE_READ_FIXED_DIMS) - pt->total_time[HDF5_FILE_READ_OPEN] += pt->mpi_timer[t] - pt->mpi_timer[HDF5_GROSS_READ_FIXED_DIMS]; - - } else { - pt->total_time[t] += MPI_Wtime() - pt->mpi_timer[t]; - pt->mpi_timer[t] = MPI_Wtime(); - - /* When we stop the timer for HDF5_GROSS_WRITE_FIXED_DIMS or HDF5_GROSS_READ_FIXED_DIMS - * we compute the time it took to close the file after the last read/write finished */ - if(t == HDF5_GROSS_WRITE_FIXED_DIMS) - pt->total_time[HDF5_FILE_WRITE_CLOSE] += pt->mpi_timer[t] - pt->mpi_timer[HDF5_FINE_WRITE_FIXED_DIMS]; - else if(t == HDF5_GROSS_READ_FIXED_DIMS) - pt->total_time[HDF5_FILE_READ_CLOSE] += pt->mpi_timer[t] - pt->mpi_timer[HDF5_FINE_READ_FIXED_DIMS]; - } - break; + if (start_stop == TSTART) { + pt->mpi_timer[t] = MPI_Wtime(); + + /* When we start the timer for HDF5_FINE_WRITE_FIXED_DIMS or HDF5_FINE_READ_FIXED_DIMS + * we compute the time it took to only open the file */ + if(t == HDF5_FINE_WRITE_FIXED_DIMS) + pt->total_time[HDF5_FILE_WRITE_OPEN] += pt->mpi_timer[t] - pt->mpi_timer[HDF5_GROSS_WRITE_FIXED_DIMS]; + else if(t == HDF5_FINE_READ_FIXED_DIMS) + pt->total_time[HDF5_FILE_READ_OPEN] += pt->mpi_timer[t] - pt->mpi_timer[HDF5_GROSS_READ_FIXED_DIMS]; + + } else { + pt->total_time[t] += MPI_Wtime() - pt->mpi_timer[t]; + pt->mpi_timer[t] = MPI_Wtime(); + + /* When we stop the timer for HDF5_GROSS_WRITE_FIXED_DIMS or HDF5_GROSS_READ_FIXED_DIMS + * we compute the time it took to close the file after the last read/write finished */ + if(t == HDF5_GROSS_WRITE_FIXED_DIMS) + pt->total_time[HDF5_FILE_WRITE_CLOSE] += pt->mpi_timer[t] - pt->mpi_timer[HDF5_FINE_WRITE_FIXED_DIMS]; + else if(t == HDF5_GROSS_READ_FIXED_DIMS) + pt->total_time[HDF5_FILE_READ_CLOSE] += pt->mpi_timer[t] - pt->mpi_timer[HDF5_FINE_READ_FIXED_DIMS]; + } + break; #else case MPI_CLOCK: - HDfprintf(stderr, "MPI clock set in serial library\n"); - return NULL; + HDfprintf(stderr, "MPI clock set in serial library\n"); + return NULL; #endif /* H5_HAVE_PARALLEL */ case SYS_CLOCK: if (start_stop == TSTART) { HDgettimeofday(&pt->sys_timer[t], NULL); - /* When we start the timer for HDF5_FINE_WRITE_FIXED_DIMS or HDF5_FINE_READ_FIXED_DIMS - * we compute the time it took to only open the file */ - if(t == HDF5_FINE_WRITE_FIXED_DIMS) - pt->total_time[HDF5_FILE_WRITE_OPEN] += sub_time(&(pt->sys_timer[t]), &(pt->sys_timer[HDF5_GROSS_WRITE_FIXED_DIMS])); - else if(t == HDF5_FINE_READ_FIXED_DIMS) - pt->total_time[HDF5_FILE_READ_OPEN] += sub_time(&(pt->sys_timer[t]), &(pt->sys_timer[HDF5_GROSS_READ_FIXED_DIMS])); + /* When we start the timer for HDF5_FINE_WRITE_FIXED_DIMS or HDF5_FINE_READ_FIXED_DIMS + * we compute the time it took to only open the file */ + if(t == HDF5_FINE_WRITE_FIXED_DIMS) + pt->total_time[HDF5_FILE_WRITE_OPEN] += sub_time(&(pt->sys_timer[t]), &(pt->sys_timer[HDF5_GROSS_WRITE_FIXED_DIMS])); + else if(t == HDF5_FINE_READ_FIXED_DIMS) + pt->total_time[HDF5_FILE_READ_OPEN] += sub_time(&(pt->sys_timer[t]), &(pt->sys_timer[HDF5_GROSS_READ_FIXED_DIMS])); } else { @@ -183,19 +183,19 @@ io_time_set(io_time_t *pt, timer_type t, int start_stop) HDgettimeofday(&sys_t, NULL); pt->total_time[t] += sub_time(&sys_t, &(pt->sys_timer[t])); - /* When we stop the timer for HDF5_GROSS_WRITE_FIXED_DIMS or HDF5_GROSS_READ_FIXED_DIMS - * we compute the time it took to close the file after the last read/write finished */ - if(t == HDF5_GROSS_WRITE_FIXED_DIMS) - pt->total_time[HDF5_FILE_WRITE_CLOSE] += sub_time(&(pt->sys_timer[t]), &(pt->sys_timer[HDF5_FINE_WRITE_FIXED_DIMS])); - else if(t == HDF5_GROSS_READ_FIXED_DIMS) - pt->total_time[HDF5_FILE_READ_CLOSE] += sub_time(&(pt->sys_timer[t]), &(pt->sys_timer[HDF5_FINE_READ_FIXED_DIMS])); + /* When we stop the timer for HDF5_GROSS_WRITE_FIXED_DIMS or HDF5_GROSS_READ_FIXED_DIMS + * we compute the time it took to close the file after the last read/write finished */ + if(t == HDF5_GROSS_WRITE_FIXED_DIMS) + pt->total_time[HDF5_FILE_WRITE_CLOSE] += sub_time(&(pt->sys_timer[t]), &(pt->sys_timer[HDF5_FINE_WRITE_FIXED_DIMS])); + else if(t == HDF5_GROSS_READ_FIXED_DIMS) + pt->total_time[HDF5_FILE_READ_CLOSE] += sub_time(&(pt->sys_timer[t]), &(pt->sys_timer[HDF5_FINE_READ_FIXED_DIMS])); } - break; + break; default: - HDfprintf(stderr, "Unknown time clock type (%d)\n", pt->type); - return NULL; + HDfprintf(stderr, "Unknown time clock type (%d)\n", pt->type); + return NULL; } /* end switch */ #if 0 @@ -221,10 +221,3 @@ io_time_get(io_time_t *pt, timer_type t) return pt->total_time[t]; } - -#if 0 -/* standalone is not working yet. Need fix later. -AKC- */ -#ifdef STANDALONE -#include "pio_standalone.c" -#endif -#endif diff --git a/tools/libtest/h5tools_test_utils.c b/tools/libtest/h5tools_test_utils.c index 120f803..726f4c4 100644 --- a/tools/libtest/h5tools_test_utils.c +++ b/tools/libtest/h5tools_test_utils.c @@ -1000,7 +1000,7 @@ test_set_configured_fapl(void) * TEST-LOCAL VARIABLES * ************************/ - hid_t fapl_id = -1; + hid_t fapl_id = H5I_INVALID_HID; other_fa_t wrong_fa = {0x432, 0xf82, 0x9093}; H5FD_ros3_fapl_t ros3_anon_fa = {1, FALSE, "", "", ""}; H5FD_ros3_fapl_t ros3_auth_fa = { @@ -1150,7 +1150,7 @@ test_set_configured_fapl(void) int result; testcase C = cases[i]; - fapl_id = -1; + fapl_id = H5I_INVALID_HID; #if UTIL_TEST_DEBUG HDfprintf(stderr, "setup test %d\t%s\n", i, C.message); fflush(stderr); @@ -1183,7 +1183,7 @@ test_set_configured_fapl(void) if (fapl_id > 0) { FAIL_IF( FAIL == H5Pclose(fapl_id) ) } - fapl_id = -1; + fapl_id = H5I_INVALID_HID; #if UTIL_TEST_DEBUG HDfprintf(stderr, "after cleanup\n"); fflush(stderr); diff --git a/tools/src/h5copy/h5copy.c b/tools/src/h5copy/h5copy.c index ffcd2b9..e1370e2 100644 --- a/tools/src/h5copy/h5copy.c +++ b/tools/src/h5copy/h5copy.c @@ -207,13 +207,12 @@ static int parse_flag(const char* s_flag, unsigned *flag) int main (int argc, const char *argv[]) { - int ret_value = 0; /*no need to LEAVE() on ERROR: H5TOOLS_ERR_INIT(int, SUCCEED) */ H5E_auto2_t func; H5E_auto2_t tools_func; void *edata; void *tools_edata; - hid_t fid_src = -1; - hid_t fid_dst = -1; + hid_t fid_src = H5I_INVALID_HID; + hid_t fid_dst = H5I_INVALID_HID; unsigned flag = 0; unsigned verbose = 0; unsigned parents = 0; @@ -222,6 +221,7 @@ main (int argc, const char *argv[]) int opt; int li_ret; h5tool_link_info_t linkinfo; + int ret_value = 0; h5tools_setprogname(PROGRAMNAME); h5tools_setstatus(EXIT_SUCCESS); @@ -394,19 +394,19 @@ main (int argc, const char *argv[]) *-------------------------------------------------------------------------*/ /* create property to pass copy options */ - if ( (ocpl_id = H5Pcreate(H5P_OBJECT_COPY)) < 0) - H5TOOLS_GOTO_ERROR(EXIT_FAILURE, H5E_tools_min_id_g, "H5Pcreate failed"); + if ((ocpl_id = H5Pcreate(H5P_OBJECT_COPY)) < 0) + H5TOOLS_GOTO_ERROR(EXIT_FAILURE, "H5Pcreate failed"); /* set options for object copy */ if (flag) { if ( H5Pset_copy_object(ocpl_id, flag) < 0) - H5TOOLS_GOTO_ERROR(EXIT_FAILURE, H5E_tools_min_id_g, "H5Pset_copy_object failed"); + H5TOOLS_GOTO_ERROR(EXIT_FAILURE, "H5Pset_copy_object failed"); } /* Create link creation property list */ if((lcpl_id = H5Pcreate(H5P_LINK_CREATE)) < 0) { error_msg("Could not create link creation property list\n"); - H5TOOLS_GOTO_ERROR(EXIT_FAILURE, H5E_tools_min_id_g, "H5Pcreate failed"); + H5TOOLS_GOTO_ERROR(EXIT_FAILURE, "H5Pcreate failed"); } /* end if */ /* Check for creating intermediate groups */ @@ -414,7 +414,7 @@ main (int argc, const char *argv[]) /* Set the intermediate group creation property */ if(H5Pset_create_intermediate_group(lcpl_id, 1) < 0) { error_msg("Could not set property for creating parent groups\n"); - H5TOOLS_GOTO_ERROR(EXIT_FAILURE, H5E_tools_min_id_g, "H5Pset_create_intermediate_group failed"); + H5TOOLS_GOTO_ERROR(EXIT_FAILURE, "H5Pset_create_intermediate_group failed"); } /* end if */ /* Display some output if requested */ @@ -438,7 +438,7 @@ main (int argc, const char *argv[]) if (H5Lexists(fid_dst, str_ptr, H5P_DEFAULT) <= 0) { error_msg("group <%s> doesn't exist. Use -p to create parent groups.\n", str_ptr); HDfree(str_ptr); - H5TOOLS_GOTO_ERROR(EXIT_FAILURE, H5E_tools_min_id_g, "H5Lexists failed"); + H5TOOLS_GOTO_ERROR(EXIT_FAILURE, "H5Lexists failed"); } HDfree(str_ptr); } @@ -458,7 +458,7 @@ main (int argc, const char *argv[]) if(H5Lcopy(fid_src, oname_src, fid_dst, oname_dst, H5P_DEFAULT, H5P_DEFAULT) < 0) - H5TOOLS_GOTO_ERROR(EXIT_FAILURE, H5E_tools_min_id_g, "H5Lcopy failed"); + H5TOOLS_GOTO_ERROR(EXIT_FAILURE, "H5Lcopy failed"); } else { /* valid link */ @@ -468,7 +468,7 @@ main (int argc, const char *argv[]) oname_dst, /* Name of the destination object */ ocpl_id, /* Object copy property list */ lcpl_id)<0) /* Link creation property list */ - H5TOOLS_GOTO_ERROR(EXIT_FAILURE, H5E_tools_min_id_g, "H5Ocopy failed"); + H5TOOLS_GOTO_ERROR(EXIT_FAILURE, "H5Ocopy failed"); } /* free link info path */ @@ -477,15 +477,15 @@ main (int argc, const char *argv[]) /* close propertis */ if(H5Pclose(ocpl_id)<0) - H5TOOLS_GOTO_ERROR(EXIT_FAILURE, H5E_tools_min_id_g, "H5Pclose failed"); + H5TOOLS_GOTO_ERROR(EXIT_FAILURE, "H5Pclose failed"); if(H5Pclose(lcpl_id)<0) - H5TOOLS_GOTO_ERROR(EXIT_FAILURE, H5E_tools_min_id_g, "H5Pclose failed"); + H5TOOLS_GOTO_ERROR(EXIT_FAILURE, "H5Pclose failed"); /* close files */ if (H5Fclose(fid_src)<0) - H5TOOLS_GOTO_ERROR(EXIT_FAILURE, H5E_tools_min_id_g, "H5Fclose failed"); + H5TOOLS_GOTO_ERROR(EXIT_FAILURE, "H5Fclose failed"); if (H5Fclose(fid_dst)<0) - H5TOOLS_GOTO_ERROR(EXIT_FAILURE, H5E_tools_min_id_g, "H5Fclose failed"); + H5TOOLS_GOTO_ERROR(EXIT_FAILURE, "H5Fclose failed"); leave(EXIT_SUCCESS); diff --git a/tools/src/h5diff/CMakeLists.txt b/tools/src/h5diff/CMakeLists.txt index 96ed6ad..c1021e4 100644 --- a/tools/src/h5diff/CMakeLists.txt +++ b/tools/src/h5diff/CMakeLists.txt @@ -10,6 +10,7 @@ if (NOT ONLY_SHARED_LIBS) ${HDF5_TOOLS_SRC_H5DIFF_SOURCE_DIR}/h5diff_main.c ) target_include_directories (h5diff PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") + #target_compile_definitions(h5diff PRIVATE H5_TOOLS_DEBUG) TARGET_C_PROPERTIES (h5diff STATIC) target_link_libraries (h5diff PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) set_target_properties (h5diff PROPERTIES FOLDER tools) @@ -23,6 +24,7 @@ if (BUILD_SHARED_LIBS) ${HDF5_TOOLS_SRC_H5DIFF_SOURCE_DIR}/h5diff_main.c ) target_include_directories (h5diff-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") + #target_compile_definitions(h5diff-shared PRIVATE H5_TOOLS_DEBUG) TARGET_C_PROPERTIES (h5diff-shared SHARED) target_link_libraries (h5diff-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET}) set_target_properties (h5diff-shared PROPERTIES FOLDER tools) diff --git a/tools/src/h5diff/h5diff_common.c b/tools/src/h5diff/h5diff_common.c index 362e3f2..e05a8e3 100644 --- a/tools/src/h5diff/h5diff_common.c +++ b/tools/src/h5diff/h5diff_common.c @@ -302,30 +302,29 @@ void parse_command_line(int argc, * *------------------------------------------------------------------------- */ +void print_info(diff_opt_t* opts) +{ + if (opts->m_quiet || opts->err_stat) + return; + + if (opts->cmn_objs == 0) { + HDprintf("No common objects found. Files are not comparable.\n"); + if (!opts->m_verbose) + HDprintf("Use -v for a list of objects.\n"); + } - void print_info(diff_opt_t* opts) - { - if (opts->m_quiet || opts->err_stat) - return; - - if (opts->cmn_objs == 0) { - HDprintf("No common objects found. Files are not comparable.\n"); - if (!opts->m_verbose) - HDprintf("Use -v for a list of objects.\n"); - } - - if (opts->not_cmp == 1) { - if (opts->m_list_not_cmp == 0) { - HDprintf("--------------------------------\n"); - HDprintf("Some objects are not comparable\n"); - HDprintf("--------------------------------\n"); - if (opts->m_verbose) - HDprintf("Use -c for a list of objects without details of differences.\n"); - else - HDprintf("Use -c for a list of objects.\n"); - } - } - } + if (opts->not_cmp == 1) { + if (opts->m_list_not_cmp == 0) { + HDprintf("--------------------------------\n"); + HDprintf("Some objects are not comparable\n"); + HDprintf("--------------------------------\n"); + if (opts->m_verbose) + HDprintf("Use -c for a list of objects without details of differences.\n"); + else + HDprintf("Use -c for a list of objects.\n"); + } + } +} /*------------------------------------------------------------------------- * Function: check_n_input diff --git a/tools/src/h5diff/ph5diff_main.c b/tools/src/h5diff/ph5diff_main.c index 380ab3b..5ba5fb3 100644 --- a/tools/src/h5diff/ph5diff_main.c +++ b/tools/src/h5diff/ph5diff_main.c @@ -126,7 +126,8 @@ int main(int argc, const char *argv[]) static void ph5diff_worker(int nID) { - hid_t file1_id = -1, file2_id = -1; + hid_t file1_id = H5I_INVALID_HID; + hid_t file2_id = H5I_INVALID_HID; while(1) { diff --git a/tools/src/h5dump/h5dump.c b/tools/src/h5dump/h5dump.c index 0222c8b..731fcd7 100644 --- a/tools/src/h5dump/h5dump.c +++ b/tools/src/h5dump/h5dump.c @@ -1393,8 +1393,8 @@ error: int main(int argc, const char *argv[]) { - hid_t fid = -1; - hid_t gid = -1; + hid_t fid = H5I_INVALID_HID; + hid_t gid = H5I_INVALID_HID; hid_t fapl_id = H5P_DEFAULT; H5E_auto2_t func; H5E_auto2_t tools_func; diff --git a/tools/src/h5dump/h5dump_ddl.c b/tools/src/h5dump/h5dump_ddl.c index bc426f2..2eb11fd 100644 --- a/tools/src/h5dump/h5dump_ddl.c +++ b/tools/src/h5dump/h5dump_ddl.c @@ -614,7 +614,7 @@ dump_named_datatype(hid_t tid, const char *name) { H5O_info_t oinfo; unsigned attr_crt_order_flags; - hid_t tcpl_id = -1; /* datatype creation property list ID */ + hid_t tcpl_id = H5I_INVALID_HID; /* datatype creation property list ID */ hsize_t curr_pos = 0; /* total data element position */ h5tools_str_t buffer; /* string into which to render */ h5tools_context_t ctx; /* print context */ @@ -1415,7 +1415,7 @@ lnk_search(const char *path, const H5L_info_t *li, void *_op_data) void handle_paths(hid_t fid, const char *path_name, void H5_ATTR_UNUSED * data, int H5_ATTR_UNUSED pe, const char H5_ATTR_UNUSED *display_name) { - hid_t gid = -1; + hid_t gid = H5I_INVALID_HID; if((gid = H5Gopen2(fid, "/", H5P_DEFAULT)) < 0) { error_msg("unable to open root group\n"); @@ -1469,8 +1469,8 @@ handle_paths(hid_t fid, const char *path_name, void H5_ATTR_UNUSED * data, int H void handle_attributes(hid_t fid, const char *attr, void H5_ATTR_UNUSED *data, int H5_ATTR_UNUSED pe, const char H5_ATTR_UNUSED *display_name) { - hid_t oid = -1; - hid_t attr_id = -1; + hid_t oid = H5I_INVALID_HID; + hid_t attr_id = H5I_INVALID_HID; char *obj_name = NULL; char *attr_name = NULL; int j; diff --git a/tools/src/h5dump/h5dump_xml.c b/tools/src/h5dump/h5dump_xml.c index b63e68d..c116da8 100644 --- a/tools/src/h5dump/h5dump_xml.c +++ b/tools/src/h5dump/h5dump_xml.c @@ -1783,9 +1783,9 @@ xml_dump_dataspace(hid_t space) void xml_dump_data(hid_t obj_id, int obj_data, struct subset_t H5_ATTR_UNUSED *sset, int H5_ATTR_UNUSED pindex) { - hid_t space = -1; - hid_t type = -1; - hid_t p_type = -1; + hid_t space = H5I_INVALID_HID; + hid_t type = H5I_INVALID_HID; + hid_t p_type = H5I_INVALID_HID; hsize_t size[64]; hsize_t nelmts = 1; int ndims; @@ -1950,9 +1950,9 @@ herr_t xml_dump_attr(hid_t attr, const char *attr_name, const H5A_info_t H5_ATTR_UNUSED *info, void H5_ATTR_UNUSED * op_data) { - hid_t attr_id = -1; - hid_t type = -1; - hid_t space = -1; + hid_t attr_id = H5I_INVALID_HID; + hid_t type = H5I_INVALID_HID; + hid_t space = H5I_INVALID_HID; H5S_class_t space_type; hsize_t curr_pos = 0; /* total data element position */ h5tools_str_t buffer; /* string into which to render */ @@ -2787,8 +2787,8 @@ static int xml_print_refs(hid_t did, int source) { herr_t e; - hid_t type = -1; - hid_t space = -1; + hid_t type = H5I_INVALID_HID; + hid_t space = H5I_INVALID_HID; hssize_t ssiz = -1; hsize_t i; size_t tsiz; @@ -2936,8 +2936,8 @@ static int xml_print_strs(hid_t did, int source) { herr_t e; - hid_t type = -1; - hid_t space = -1; + hid_t type = H5I_INVALID_HID; + hid_t space = H5I_INVALID_HID; hssize_t ssiz = -1; htri_t is_vlstr = FALSE; size_t tsiz = 0; @@ -4121,7 +4121,7 @@ xml_print_enum(hid_t type) unsigned char *value = NULL; /*value array */ unsigned nmembs; /*number of members */ hid_t super; /*enum base integer type */ - hid_t native = -1; /*native integer datatype */ + hid_t native = H5I_INVALID_HID; /*native integer datatype */ size_t dst_size; /*destination value type size */ unsigned i; /*miscellaneous counters */ size_t j; diff --git a/tools/src/h5format_convert/h5format_convert.c b/tools/src/h5format_convert/h5format_convert.c index 257a047..f5234f4 100644 --- a/tools/src/h5format_convert/h5format_convert.c +++ b/tools/src/h5format_convert/h5format_convert.c @@ -219,8 +219,8 @@ leave(int ret) static int convert(hid_t fid, const char *dname) { - hid_t dcpl = -1; - hid_t did = -1; + hid_t dcpl = H5I_INVALID_HID; + hid_t did = H5I_INVALID_HID; H5D_layout_t layout_type; H5D_chunk_index_t idx_type; @@ -399,7 +399,7 @@ main(int argc, const char *argv[]) { H5E_auto2_t func; void *edata; - hid_t fid = -1; + hid_t fid = H5I_INVALID_HID; h5tools_setprogname(PROGRAMNAME); h5tools_setstatus(EXIT_SUCCESS); diff --git a/tools/src/h5import/h5import.c b/tools/src/h5import/h5import.c index 1eef5ab..81f9a32 100644 --- a/tools/src/h5import/h5import.c +++ b/tools/src/h5import/h5import.c @@ -1086,12 +1086,12 @@ out: */ static int processStrHDFData(FILE *strm, struct Input *in, hid_t file_id) { - hid_t group_id = -1; - hid_t dset_id = -1; - hid_t space_id = -1; - hid_t mspace_id = -1; - hid_t type_id = -1; - hid_t handle = -1; + hid_t group_id = H5I_INVALID_HID; + hid_t dset_id = H5I_INVALID_HID; + hid_t space_id = H5I_INVALID_HID; + hid_t mspace_id = H5I_INVALID_HID; + hid_t type_id = H5I_INVALID_HID; + hid_t handle = H5I_INVALID_HID; char *str1 = NULL; char *str2 = NULL; char *str3 = NULL; @@ -4707,14 +4707,14 @@ static int process(struct Options *opt) return (0); } -uint16_t swap_uint16( uint16_t val) +uint16_t swap_uint16(uint16_t val) { - return (val << 8) | (val >> 8); + return (uint16_t)((val << 8) | (val >> 8)); } int16_t swap_int16(int16_t val) { - return (val << 8) | ((val >> 8) & 0xFF); + return (int16_t)((val << 8) | ((val >> 8) & 0xFF)); } uint32_t swap_uint32(uint32_t val) diff --git a/tools/src/h5jam/h5jam.c b/tools/src/h5jam/h5jam.c index 8222e06..07797c8 100644 --- a/tools/src/h5jam/h5jam.c +++ b/tools/src/h5jam/h5jam.c @@ -197,8 +197,8 @@ main (int argc, const char *argv[]) int ofid = -1; void *edata; H5E_auto2_t func; - hid_t ifile = -1; - hid_t plist = -1; + hid_t ifile = H5I_INVALID_HID; + hid_t plist = H5I_INVALID_HID; herr_t status; htri_t testval; hsize_t usize; diff --git a/tools/src/h5jam/h5unjam.c b/tools/src/h5jam/h5unjam.c index aa893f9..203522b 100644 --- a/tools/src/h5jam/h5unjam.c +++ b/tools/src/h5jam/h5unjam.c @@ -199,8 +199,8 @@ main(int argc, const char *argv[]) { void *edata; H5E_auto2_t func; - hid_t ifile = -1; - hid_t plist = -1; + hid_t ifile = H5I_INVALID_HID; + hid_t plist = H5I_INVALID_HID; off_t fsize; hsize_t usize; htri_t testval; diff --git a/tools/src/h5ls/h5ls.c b/tools/src/h5ls/h5ls.c index 6c21782..e8a7a2b 100644 --- a/tools/src/h5ls/h5ls.c +++ b/tools/src/h5ls/h5ls.c @@ -879,7 +879,7 @@ print_enum_type(h5tools_str_t *buffer, hid_t type, int ind) if (nmembs > 0) { char **name; /* member names */ unsigned char *value; /* value array */ - hid_t native = -1; /* native integer data type */ + hid_t native = H5I_INVALID_HID; /* native integer data type */ size_t dst_size; /* destination value type size */ unsigned i; /* miscellaneous counters */ @@ -1291,7 +1291,6 @@ print_type(h5tools_str_t *buffer, hid_t type, int ind) static void dump_reference(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx, hid_t container, H5R_ref_t *ref_buf, int ndims) { - H5TOOLS_ERR_INIT(int, SUCCEED) hid_t new_obj_id = H5I_INVALID_HID; hid_t new_obj_sid = H5I_INVALID_HID; hsize_t elmt_counter = 0; /*counts the # elements printed. */ @@ -1301,8 +1300,7 @@ dump_reference(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx h5tools_str_t buffer; /* string into which to render */ h5tools_context_t datactx; /* print context */ - H5TOOLS_PUSH_STACK(); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter"); + H5TOOLS_DEBUG("enter"); datactx = *ctx; /* print context */ /* Assume entire data space to be printed */ @@ -1313,21 +1311,21 @@ dump_reference(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx HDmemset(&buffer, 0, sizeof(h5tools_str_t)); for(i = 0; i < ndims; i++, datactx.cur_elmt++, elmt_counter++) { - H5O_type_t obj_type; /* Object type */ + H5O_type_t obj_type = -1; /* Object type */ H5R_type_t ref_type; /* Reference type */ - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "reference loop:%d with curr_pos=%ld", i, curr_pos); + H5TOOLS_DEBUG("reference loop:%d with curr_pos=%ld", i, curr_pos); datactx.need_prefix = TRUE; h5tools_str_reset(&buffer); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "reference loop - h5tools_str_sprint with H5T_STD_REF:%d", i); + H5TOOLS_DEBUG("reference loop - h5tools_str_sprint with H5T_STD_REF:%d", i); h5tools_str_sprint(&buffer, info, container, H5T_STD_REF, &ref_buf[i], &datactx); h5tools_render_element(stream, info, &datactx, &buffer, &curr_pos, (size_t)ncols, (hsize_t)i, (hsize_t)ndims); ref_type = H5Rget_type((const H5R_ref_t *)&ref_buf[i]); switch (ref_type) { case H5R_OBJECT1: - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ref_type is H5R_OBJECT1"); + H5TOOLS_DEBUG("ref_type is H5R_OBJECT1"); if (H5Rget_obj_type3((const H5R_ref_t *)&ref_buf[i], H5P_DEFAULT, &obj_type) >= 0) { switch (obj_type) { case H5O_TYPE_DATASET: @@ -1336,12 +1334,12 @@ dump_reference(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx h5tools_dump_dset(stream, info, &datactx, new_obj_id); datactx.indent_level--; if(H5Dclose(new_obj_id) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dclose H5R_OBJECT1:H5O_TYPE_DATASET failed"); + H5TOOLS_INFO("H5Dclose H5R_OBJECT1:H5O_TYPE_DATASET failed"); if(H5Rdestroy(&ref_buf[i]) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rdestroy H5R_OBJECT1:H5O_TYPE_DATASET failed"); + H5TOOLS_INFO("H5Rdestroy H5R_OBJECT1:H5O_TYPE_DATASET failed"); } else - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Ropen_object H5R_OBJECT1:H5O_TYPE_DATASET failed"); + H5TOOLS_INFO("H5Ropen_object H5R_OBJECT1:H5O_TYPE_DATASET failed"); break; case H5O_TYPE_GROUP: @@ -1354,24 +1352,24 @@ dump_reference(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx } /* end switch */ } else - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rget_obj_type3 H5R_OBJECT1 failed"); + H5TOOLS_INFO("H5Rget_obj_type3 H5R_OBJECT1 failed"); break; case H5R_DATASET_REGION1: - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ref_type is H5R_DATASET_REGION1"); + H5TOOLS_DEBUG("ref_type is H5R_DATASET_REGION1"); if((new_obj_id = H5Ropen_object((const H5R_ref_t *)&ref_buf[i], H5P_DEFAULT, H5P_DEFAULT)) >= 0) { datactx.indent_level++; h5tools_dump_dset(stream, info, &datactx, new_obj_id); datactx.indent_level--; if(H5Dclose(new_obj_id) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dclose H5R_DATASET_REGION1 failed"); + H5TOOLS_INFO("H5Dclose H5R_DATASET_REGION1 failed"); if(H5Rdestroy(&ref_buf[i]) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rdestroy H5R_DATASET_REGION1 failed"); + H5TOOLS_INFO("H5Rdestroy H5R_DATASET_REGION1 failed"); } else - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Ropen_object H5R_DATASET_REGION1 failed"); + H5TOOLS_INFO("H5Ropen_object H5R_DATASET_REGION1 failed"); break; case H5R_OBJECT2: - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ref_type is H5R_OBJECT2"); + H5TOOLS_DEBUG("ref_type is H5R_OBJECT2"); if (H5Rget_obj_type3((const H5R_ref_t *)&ref_buf[i], H5P_DEFAULT, &obj_type) >= 0) { switch (obj_type) { case H5O_TYPE_GROUP: @@ -1383,12 +1381,12 @@ dump_reference(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx h5tools_dump_dset(stream, info, &datactx, new_obj_id); datactx.indent_level--; if(H5Oclose(new_obj_id) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Oclose H5R_OBJECT2 failed"); + H5TOOLS_INFO("H5Oclose H5R_OBJECT2 failed"); if(H5Rdestroy(&ref_buf[i]) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rdestroy H5R_OBJECT2 failed"); + H5TOOLS_INFO("H5Rdestroy H5R_OBJECT2 failed"); } else - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Ropen_object H5R_OBJECT2 failed"); + H5TOOLS_INFO("H5Ropen_object H5R_OBJECT2 failed"); break; case H5O_TYPE_NAMED_DATATYPE: @@ -1402,22 +1400,21 @@ dump_reference(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx } /* end switch */ } else - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rget_obj_type3 H5R_OBJECT2 failed"); + H5TOOLS_INFO("H5Rget_obj_type3 H5R_OBJECT2 failed"); break; case H5R_DATASET_REGION2: - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ref_type is H5R_DATASET_REGION2"); + H5TOOLS_DEBUG("ref_type is H5R_DATASET_REGION2"); if (info->line_ncols > 0) ncols = info->line_ncols; /* if (new_obj_id < 0) - could mean that no reference was written do not throw failure */ if((new_obj_id = H5Ropen_object((const H5R_ref_t *)&ref_buf[i], H5P_DEFAULT, H5P_DEFAULT)) < 0) - H5Epush2(H5tools_ERR_STACK_g, __FILE__, FUNC, __LINE__, H5tools_ERR_CLS_g, H5E_tools_g, H5E_tools_min_id_g, - "H5Ropen_object H5R_DATASET_REGION2 failed"); + H5TOOLS_INFO("H5Ropen_object H5R_DATASET_REGION2 failed"); else { if((new_obj_sid = H5Ropen_region((const H5R_ref_t *)&ref_buf[i], H5P_DEFAULT, H5P_DEFAULT)) >= 0) { if (h5tools_is_zero(&ref_buf[i], H5Tget_size(H5T_STD_REF))) { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "NULL H5R_DATASET_REGION2"); + H5TOOLS_DEBUG("NULL H5R_DATASET_REGION2"); h5tools_str_reset(&buffer); h5tools_str_append(&buffer, " {"); @@ -1441,41 +1438,41 @@ dump_reference(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx region_type = H5Sget_select_type(new_obj_sid); if(region_type == H5S_SEL_POINTS) { /* Print point information */ - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5S_SEL_POINTS H5R_DATASET_REGION2"); + H5TOOLS_DEBUG("H5S_SEL_POINTS H5R_DATASET_REGION2"); h5tools_dump_region_data_points(new_obj_sid, new_obj_id, stream, info, &datactx, &buffer, &curr_pos, ncols, i, elmt_counter); } else if(region_type == H5S_SEL_HYPERSLABS) { /* Print block information */ - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5S_SEL_HYPERSLABS H5R_DATASET_REGION2"); + H5TOOLS_DEBUG("H5S_SEL_HYPERSLABS H5R_DATASET_REGION2"); h5tools_dump_region_data_blocks(new_obj_sid, new_obj_id, stream, info, &datactx, &buffer, &curr_pos, ncols, i, elmt_counter); } else - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "invalid region type"); + H5TOOLS_INFO("invalid region type"); } /* end else to if (h5tools_is_zero(... */ if(H5Sclose(new_obj_sid) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sclose H5R_DATASET_REGION2 failed"); + H5TOOLS_INFO("H5Sclose H5R_DATASET_REGION2 failed"); } else - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Ropen_region H5R_DATASET_REGION2 failed"); + H5TOOLS_INFO("H5Ropen_region H5R_DATASET_REGION2 failed"); if(H5Dclose(new_obj_id) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dclose H5R_DATASET_REGION2 failed"); + H5TOOLS_INFO("H5Dclose H5R_DATASET_REGION2 failed"); if(H5Rdestroy(&ref_buf[i]) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rdestroy H5R_DATASET_REGION2 failed"); + H5TOOLS_INFO("H5Rdestroy H5R_DATASET_REGION2 failed"); } break; case H5R_ATTR: - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ref_type is H5R_ATTR"); + H5TOOLS_DEBUG("ref_type is H5R_ATTR"); if((new_obj_id = H5Ropen_attr((const H5R_ref_t *)&ref_buf[i], H5P_DEFAULT, H5P_DEFAULT)) >= 0) { h5tools_dump_region_attribute(new_obj_id, stream, info, &datactx, &buffer, &curr_pos, (size_t)ncols, (hsize_t)0, (hsize_t)0); if(H5Aclose(new_obj_id) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aclose H5R_ATTR failed"); + H5TOOLS_INFO("H5Aclose H5R_ATTR failed"); if(H5Rdestroy(&ref_buf[i]) < 0) - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rdestroy H5R_ATTR failed"); + H5TOOLS_INFO("H5Rdestroy H5R_ATTR failed"); } else { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "NULL H5R_ATTR"); + H5TOOLS_DEBUG("NULL H5R_ATTR"); h5tools_str_reset(&buffer); h5tools_str_append(&buffer, " {"); @@ -1493,7 +1490,7 @@ dump_reference(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx h5tools_str_append(&buffer, "}"); h5tools_render_element(stream, info, &datactx, &buffer, &curr_pos, (size_t)ncols, (hsize_t)0, (hsize_t)0); - H5TOOLS_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Ropen_attr H5R_ATTR failed"); + H5TOOLS_INFO("H5Ropen_attr H5R_ATTR failed"); } break; case H5R_BADTYPE: @@ -1502,15 +1499,14 @@ dump_reference(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx break; } /* end switch */ - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "finished reference loop:%d",i); + H5TOOLS_DEBUG("finished reference loop:%d",i); } /* end for(i = 0; i < ndims; i++, ctx->cur_elmt++, elmt_counter++) */ -done: + h5tools_str_close(&buffer); PRINTVALSTREAM(stream, "\n"); - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit"); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit"); } /*------------------------------------------------------------------------- @@ -1524,7 +1520,6 @@ done: static void dump_dataset_values(hid_t dset) { - H5TOOLS_ERR_INIT(herr_t, SUCCEED) hid_t f_type = H5I_INVALID_HID; hid_t space = H5I_INVALID_HID; hsize_t total_size[H5S_MAX_RANK]; @@ -1540,8 +1535,7 @@ dump_dataset_values(hid_t dset) h5tool_format_t *info = &ls_dataformat; H5R_ref_t *ref_buf = NULL; - H5TOOLS_PUSH_STACK(); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter"); + H5TOOLS_DEBUG("enter"); f_type = H5Dget_type(dset); space = H5Dget_space(dset); @@ -1637,13 +1631,13 @@ dump_dataset_values(hid_t dset) ctx.need_prefix = TRUE; ctx.cur_column = (size_t)curr_pos; if (H5Tget_class(f_type) == H5T_REFERENCE) { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "reference class type"); + H5TOOLS_DEBUG("reference class type"); if (!H5Tequal(f_type, H5T_STD_REF) && !H5Tequal(f_type, H5T_STD_REF_DSETREG) && !H5Tequal(f_type, H5T_STD_REF_OBJ)) { - HGOTO_DONE(SUCCEED); + H5TOOLS_GOTO_DONE_NO_RET(); } ndims = (int)H5Sget_simple_extent_npoints(space); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ndims=%d - ctx.ndims=%d", ndims, ctx.ndims); + H5TOOLS_DEBUG("ndims=%d - ctx.ndims=%d", ndims, ctx.ndims); /* Assume entire data space to be printed */ if (ctx.ndims > 0) @@ -1656,10 +1650,11 @@ dump_dataset_values(hid_t dset) ctx.need_prefix = TRUE; if (NULL != (ref_buf = (H5R_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(H5R_ref_t)), ndims))) { - H5TOOLS_DEBUG(H5E_tools_min_id_g, "H5Dread reference read"); + H5TOOLS_DEBUG("H5Dread reference read"); if(H5Dread(dset, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, ref_buf) < 0) { HDfree(ref_buf); - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dread reference failed"); + H5TOOLS_INFO("H5Dread reference failed"); + H5TOOLS_GOTO_DONE_NO_RET(); } dump_reference(rawoutstream, info, &ctx, dset, ref_buf, ndims); HDfree(ref_buf); @@ -1680,8 +1675,7 @@ done: PRINTVALSTREAM(rawoutstream, "\n"); - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit"); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit"); } @@ -1696,7 +1690,6 @@ done: static void dump_attribute_values(hid_t attr, const char *attr_name) { - H5TOOLS_ERR_INIT(herr_t, SUCCEED) hid_t f_type = H5I_INVALID_HID; hid_t space = H5I_INVALID_HID; hsize_t total_size[H5S_MAX_RANK]; @@ -1712,8 +1705,7 @@ dump_attribute_values(hid_t attr, const char *attr_name) h5tool_format_t *info = &ls_dataformat; H5R_ref_t *ref_buf = NULL; - H5TOOLS_PUSH_STACK(); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter"); + H5TOOLS_DEBUG("enter"); f_type = H5Aget_type(attr); space = H5Aget_space(attr); @@ -1810,13 +1802,13 @@ dump_attribute_values(hid_t attr, const char *attr_name) ctx.need_prefix = TRUE; ctx.cur_column = (size_t)curr_pos; if (H5Tget_class(f_type) == H5T_REFERENCE) { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "reference class type"); + H5TOOLS_DEBUG("reference class type"); if (!H5Tequal(f_type, H5T_STD_REF) && !H5Tequal(f_type, H5T_STD_REF_DSETREG) && !H5Tequal(f_type, H5T_STD_REF_OBJ)) { - HGOTO_DONE(SUCCEED); + H5TOOLS_GOTO_DONE_NO_RET(); } ndims = (int)H5Sget_simple_extent_npoints(space); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "ndims=%d - ctx.ndims=%d", ndims, ctx.ndims); + H5TOOLS_DEBUG("ndims=%d - ctx.ndims=%d", ndims, ctx.ndims); /* Assume entire data space to be printed */ if (ctx.ndims > 0) @@ -1829,10 +1821,11 @@ dump_attribute_values(hid_t attr, const char *attr_name) ctx.need_prefix = TRUE; if (NULL != (ref_buf = (H5R_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(H5R_ref_t)), ndims))) { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "H5Aread reference read"); + H5TOOLS_DEBUG("H5Aread reference read"); if(H5Aread(attr, H5T_STD_REF, ref_buf) < 0) { HDfree(ref_buf); - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aread reference failed"); + H5TOOLS_INFO("H5Aread reference failed"); + H5TOOLS_GOTO_DONE_NO_RET(); } ctx.indent_level++; dump_reference(rawoutstream, info, &ctx, attr, ref_buf, ndims); @@ -1841,7 +1834,7 @@ dump_attribute_values(hid_t attr, const char *attr_name) } } else { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "Attribute data read"); + H5TOOLS_DEBUG("Attribute data read"); ctx.indent_level++; if (h5tools_dump_mem(rawoutstream, info, &ctx, attr) < 0) { h5tools_str_reset(&buffer); @@ -1849,7 +1842,7 @@ dump_attribute_values(hid_t attr, const char *attr_name) h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); } ctx.indent_level--; - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "Attribute data read complete"); + H5TOOLS_DEBUG("Attribute data read complete"); } done: H5Sclose(space); @@ -1859,8 +1852,7 @@ done: PRINTVALSTREAM(rawoutstream, "\n"); - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit"); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit"); } /*------------------------------------------------------------------------- @@ -1876,7 +1868,6 @@ static herr_t list_attr(hid_t obj, const char *attr_name, const H5A_info_t H5_ATTR_UNUSED *ainfo, void H5_ATTR_UNUSED *op_data) { - H5TOOLS_ERR_INIT(herr_t, SUCCEED) hid_t attr = H5I_INVALID_HID; hid_t space = H5I_INVALID_HID; hid_t type = H5I_INVALID_HID; @@ -1890,8 +1881,7 @@ list_attr(hid_t obj, const char *attr_name, const H5A_info_t H5_ATTR_UNUSED *ain h5tools_context_t ctx; /* print context */ h5tool_format_t *info = &ls_dataformat; - H5TOOLS_PUSH_STACK(); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter"); + H5TOOLS_DEBUG("enter"); HDmemset(&ctx, 0, sizeof(ctx)); HDmemset(&buffer, 0, sizeof(h5tools_str_t)); @@ -1904,7 +1894,7 @@ list_attr(hid_t obj, const char *attr_name, const H5A_info_t H5_ATTR_UNUSED *ain print_string(&buffer, attr_name, TRUE); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "Attribute name:%s", attr_name); + H5TOOLS_DEBUG("Attribute name:%s", attr_name); if ((attr = H5Aopen(obj, attr_name, H5P_DEFAULT)) >= 0) { space = H5Aget_space(attr); type = H5Aget_type(attr); @@ -1912,7 +1902,7 @@ list_attr(hid_t obj, const char *attr_name, const H5A_info_t H5_ATTR_UNUSED *ain /* Data space */ ndims = H5Sget_simple_extent_dims(space, size, NULL); space_type = H5Sget_simple_extent_type(space); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "Attribute ndims:%d", ndims); + H5TOOLS_DEBUG("Attribute ndims:%d", ndims); switch(space_type) { case H5S_SCALAR: /* scalar dataspace */ @@ -1962,11 +1952,10 @@ list_attr(hid_t obj, const char *attr_name, const H5A_info_t H5_ATTR_UNUSED *ain H5Aclose(attr); } else { - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "Attribute open failed"); + H5TOOLS_DEBUG("Attribute open failed"); h5tools_str_close(&buffer); } - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit"); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit"); return 0; } @@ -2297,7 +2286,6 @@ datatype_list2(hid_t type, const char H5_ATTR_UNUSED *name) static herr_t list_obj(const char *name, const H5O_info_t *oinfo, const char *first_seen, void *_iter) { - H5TOOLS_ERR_INIT(herr_t, SUCCEED) H5O_type_t obj_type = oinfo->type; /* Type of the object */ iter_t *iter = (iter_t*)_iter; hsize_t curr_pos = 0; /* total data element position */ @@ -2305,15 +2293,14 @@ list_obj(const char *name, const H5O_info_t *oinfo, const char *first_seen, void h5tools_context_t ctx; /* print context */ h5tool_format_t *info = &ls_dataformat; - H5TOOLS_PUSH_STACK(); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "enter"); + H5TOOLS_DEBUG("enter"); HDmemset(&ctx, 0, sizeof(ctx)); HDmemset(&buffer, 0, sizeof(h5tools_str_t)); h5tools_str_reset(&buffer); - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "Object name:%s", name); + H5TOOLS_DEBUG("Object name:%s", name); /* Print the link's name, either full name or base name */ if (!iter->symlink_target) print_obj_name(&buffer, iter, name, ""); @@ -2345,7 +2332,7 @@ list_obj(const char *name, const H5O_info_t *oinfo, const char *first_seen, void /* Open the object. Not all objects can be opened. If this is the case * then return right away. */ - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "Open object name=%s", name); + H5TOOLS_DEBUG("Open object name=%s", name); if (obj_type >= 0 && (obj = H5Oopen(iter->fid, name, H5P_DEFAULT)) < 0) { h5tools_str_reset(&buffer); h5tools_str_append(&buffer, " *ERROR*\n"); @@ -2354,7 +2341,7 @@ list_obj(const char *name, const H5O_info_t *oinfo, const char *first_seen, void } /* end if */ /* List the first line of information for the object. */ - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "Object type:%d", obj_type); + H5TOOLS_DEBUG("Object type:%d", obj_type); if (obj_type >= 0 && dispatch_g[obj_type].list1) (dispatch_g[obj_type].list1)(obj); if (!iter->symlink_target || (verbose_g > 0)) { @@ -2371,7 +2358,7 @@ list_obj(const char *name, const H5O_info_t *oinfo, const char *first_seen, void ssize_t cmt_bufsize = -1; /* Display attributes */ - H5TOOLS_DEBUG(H5E_tools_min_dbg_id_g, "Display attributes"); + H5TOOLS_DEBUG("Display attributes"); if (obj_type >= 0) H5Aiterate2(obj, H5_INDEX_NAME, H5_ITER_INC, NULL, list_attr, NULL); @@ -2439,8 +2426,7 @@ done: } h5tools_str_close(&buffer); - H5TOOLS_ENDDEBUG(H5E_tools_min_dbg_id_g, "exit"); - H5TOOLS_POP_STACK(); + H5TOOLS_ENDDEBUG("exit"); return 0; } /* end list_obj() */ @@ -2835,7 +2821,7 @@ leave(int ret) int main(int argc, const char *argv[]) { - hid_t file = H5I_INVALID_HID; + hid_t file_id = H5I_INVALID_HID; char *fname = NULL, *oname = NULL, *x; const char *s = NULL; char *rest; @@ -3300,17 +3286,17 @@ main(int argc, const char *argv[]) fname = HDstrdup(argv[argno++]); oname = NULL; - file = -1; + file_id = H5I_INVALID_HID; while (fname && *fname) { if (fapl_id != H5P_DEFAULT) { - file = H5Fopen(fname, H5F_ACC_RDONLY, fapl_id); + file_id = H5Fopen(fname, H5F_ACC_RDONLY, fapl_id); } else { - file = h5tools_fopen(fname, H5F_ACC_RDONLY, H5P_DEFAULT, preferred_driver, drivername, sizeof drivername); + file_id = h5tools_fopen(fname, H5F_ACC_RDONLY, H5P_DEFAULT, preferred_driver, drivername, sizeof drivername); } - if (file >= 0) { + if (file_id >= 0) { if (verbose_g) PRINTSTREAM(rawoutstream, "Opened \"%s\" with %s driver.\n", fname, drivername); break; /*success*/ @@ -3326,7 +3312,7 @@ main(int argc, const char *argv[]) *oname = '\0'; } /* end while */ - if (file < 0) { + if (file_id < 0) { HDfprintf(rawerrorstream, "%s: unable to open file\n", argv[argno-1]); HDfree(fname); err_exit = 1; @@ -3361,8 +3347,8 @@ main(int argc, const char *argv[]) /* Remember the file information for later */ iter.fname = fname; - iter.fid = file; - iter.gid = -1; + iter.fid = file_id; + iter.gid = H5I_INVALID_HID; iter.symlink_target = FALSE; iter.symlink_list = &symlink_list; iter.symlink_list->dangle_link = FALSE; @@ -3374,7 +3360,7 @@ main(int argc, const char *argv[]) /* Check for root group as object name */ if (HDstrcmp(oname, root_name)) { /* Check the type of link given */ - if (H5Lget_info(file, oname, &li, H5P_DEFAULT) < 0) { + if (H5Lget_info(file_id, oname, &li, H5P_DEFAULT) < 0) { hsize_t curr_pos = 0; /* total data element position */ h5tools_str_t buffer; /* string into which to render */ h5tools_context_t ctx; /* print context */ @@ -3395,18 +3381,18 @@ main(int argc, const char *argv[]) /* Open the object and display it's information */ if (li.type == H5L_TYPE_HARD) { - if (visit_obj(file, oname, &iter) < 0) { + if (visit_obj(file_id, oname, &iter) < 0) { H5Eset_auto2(H5E_DEFAULT, func, edata); leave(EXIT_FAILURE); } } /* end if(li.type == H5L_TYPE_HARD) */ else { /* Specified name is not for object -- list that link */ - /* Use file ID for root group ID */ - iter.gid = file; + /* Use file_id ID for root group ID */ + iter.gid = file_id; list_lnk(oname, &li, &iter); } - H5Fclose(file); + H5Fclose(file_id); HDfree(fname); if (x) HDfree(oname); diff --git a/tools/src/h5repack/h5repack.c b/tools/src/h5repack/h5repack.c index 971589e..b138896 100644 --- a/tools/src/h5repack/h5repack.c +++ b/tools/src/h5repack/h5repack.c @@ -225,10 +225,10 @@ copy_named_datatype(hid_t type_in, hid_t fidout, named_dt_t **named_dt_head_p, t named_dt_t *dt = *named_dt_head_p; /* Stack pointer */ named_dt_t *dt_ret = NULL; /* Datatype to return */ H5O_info_t oinfo; /* Object info of input dtype */ - hid_t ret_value = -1; /* The identifier of the named dtype in the out file */ + hid_t ret_value = H5I_INVALID_HID; if (H5Oget_info2(type_in, &oinfo, H5O_INFO_BASIC) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Oget_info failed"); + H5TOOLS_GOTO_ERROR(H5I_INVALID_HID, "H5Oget_info failed"); if (*named_dt_head_p) { /* Stack already exists, search for the datatype */ @@ -244,13 +244,13 @@ copy_named_datatype(hid_t type_in, hid_t fidout, named_dt_t **named_dt_head_p, t if (travt->objs[i].type == H5TRAV_TYPE_NAMED_DATATYPE) { /* Push onto the stack */ if (NULL == (dt = (named_dt_t *)HDmalloc(sizeof(named_dt_t)))) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "buffer allocation failed failed"); + H5TOOLS_GOTO_ERROR(H5I_INVALID_HID, "buffer allocation failed failed"); dt->next = *named_dt_head_p; *named_dt_head_p = dt; /* Update the address and id */ dt->addr_in = travt->objs[i].objno; - dt->id_out = -1; + dt->id_out = H5I_INVALID_HID; /* Check if this type is the one requested */ if (oinfo.addr == dt->addr_in) { @@ -266,13 +266,13 @@ copy_named_datatype(hid_t type_in, hid_t fidout, named_dt_t **named_dt_head_p, t if (!dt_ret) { /* Push the new datatype onto the stack */ if (NULL == (dt_ret = (named_dt_t *)HDmalloc(sizeof(named_dt_t)))) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "buffer allocation failed failed"); + H5TOOLS_GOTO_ERROR(H5I_INVALID_HID, "buffer allocation failed failed"); dt_ret->next = *named_dt_head_p; *named_dt_head_p = dt_ret; /* Update the address and id */ dt_ret->addr_in = oinfo.addr; - dt_ret->id_out = -1; + dt_ret->id_out = H5I_INVALID_HID; } /* end if requested datatype not found */ /* If the requested datatype does not yet exist in the output file, copy it @@ -284,9 +284,9 @@ copy_named_datatype(hid_t type_in, hid_t fidout, named_dt_t **named_dt_head_p, t else dt_ret->id_out = H5Tcopy(type_in); if (dt_ret->id_out < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tget_native_type-H5Tcopy failed"); + H5TOOLS_GOTO_ERROR(H5I_INVALID_HID, "H5Tget_native_type-H5Tcopy failed"); if (H5Tcommit_anon(fidout, dt_ret->id_out, H5P_DEFAULT, H5P_DEFAULT) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tcommit_anon failed"); + H5TOOLS_GOTO_ERROR(H5I_INVALID_HID, "H5Tcommit_anon failed"); } /* end if named datatype not yet in output file */ /* Set return value */ @@ -296,7 +296,7 @@ copy_named_datatype(hid_t type_in, hid_t fidout, named_dt_t **named_dt_head_p, t * to close it. (TODO: fix scope envy) */ if (H5Iinc_ref(ret_value) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Iinc_ref failed"); + H5TOOLS_GOTO_ERROR(H5I_INVALID_HID, "H5Iinc_ref failed"); done: return ret_value; @@ -312,12 +312,12 @@ int named_datatype_free(named_dt_t **named_dt_head_p, int ignore_err) { named_dt_t *dt = *named_dt_head_p; - int ret_value = -1; + int ret_value = -1; while (dt) { /* Pop the datatype off the stack and free it */ if (H5Tclose(dt->id_out) < 0 && !ignore_err) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tclose failed"); dt = dt->next; HDfree(*named_dt_head_p); *named_dt_head_p = dt; @@ -343,12 +343,11 @@ done: int copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, trav_table_t *travt, pack_opt_t *options) { - int ret_value = 0; - hid_t attr_id = -1; /* attr ID */ - hid_t attr_out = -1; /* attr ID */ - hid_t space_id = -1; /* space ID */ - hid_t ftype_id = -1; /* file type ID */ - hid_t wtype_id = -1; /* read/write type ID */ + hid_t attr_id = H5I_INVALID_HID; /* attr ID */ + hid_t attr_out = H5I_INVALID_HID; /* attr ID */ + hid_t space_id = H5I_INVALID_HID; /* space ID */ + hid_t ftype_id = H5I_INVALID_HID; /* file type ID */ + hid_t wtype_id = H5I_INVALID_HID; /* read/write type ID */ size_t msize; /* size of type */ void *buf = NULL; /* data buffer */ hsize_t nelmts; /* number of elements in dataset */ @@ -361,9 +360,10 @@ copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, trav_table_ unsigned u; hbool_t is_ref = 0; H5T_class_t type_class = -1; + int ret_value = 0; if (H5Oget_info2(loc_in, &oinfo, H5O_INFO_NUM_ATTRS) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Oget_info failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Oget_info failed"); /*------------------------------------------------------------------------- * copy all attributes @@ -372,33 +372,33 @@ copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, trav_table_ for (u = 0; u < (unsigned) oinfo.num_attrs; u++) { /* open attribute */ if ((attr_id = H5Aopen_by_idx(loc_in, ".", H5_INDEX_CRT_ORDER, H5_ITER_INC, (hsize_t) u, H5P_DEFAULT, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aopen_by_idx failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Aopen_by_idx failed"); if (H5Aget_name(attr_id, (size_t) 255, name) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pclose failed"); /* get the file datatype */ if ((ftype_id = H5Aget_type(attr_id)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aget_type failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Aget_type failed"); /* Check if the datatype is committed */ if ((is_named = H5Tcommitted(ftype_id)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tcommitted failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tcommitted failed"); if (is_named && travt) { - hid_t fidout = -1; + hid_t fidout = H5I_INVALID_HID; /* Create out file id */ if ((fidout = H5Iget_file_id(loc_out)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Iget_file_id failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Iget_file_id failed"); /* Copy named dt */ if ((wtype_id = copy_named_datatype(ftype_id, fidout, named_dt_head_p, travt, options)) < 0) { H5Fclose(fidout); - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "copy_named_datatype failed"); + H5TOOLS_GOTO_ERROR((-1), "copy_named_datatype failed"); } if (H5Fclose(fidout) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Fclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Fclose failed"); } /* end if datatype is committed and we have a traversal table */ else { if (options->use_native == 1) @@ -409,18 +409,18 @@ copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, trav_table_ /* get the dataspace handle */ if ((space_id = H5Aget_space(attr_id)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aget_space failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Aget_space failed"); /* get dimensions */ if ((rank = H5Sget_simple_extent_dims(space_id, dims, NULL)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sget_simple_extent_dims failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Sget_simple_extent_dims failed"); nelmts = 1; for (j = 0; j < rank; j++) nelmts *= dims[j]; if ((msize = H5Tget_size(wtype_id)) == 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tget_size failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tget_size failed"); /*--------------------------------------------------------------------- * object references are a special case. We cannot just copy the @@ -432,12 +432,12 @@ copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, trav_table_ type_class = H5Tget_class(wtype_id); is_ref = (type_class == H5T_REFERENCE); if (type_class == H5T_VLEN || type_class == H5T_ARRAY) { - hid_t base_type = -1; + hid_t base_type = H5I_INVALID_HID; base_type = H5Tget_super(ftype_id); is_ref = (is_ref || (H5Tget_class(base_type) == H5T_REFERENCE)); if (H5Tclose(base_type) < 0) - H5TOOLS_INFO(H5E_tools_min_id_g, "H5Tclose base_type failed"); + H5TOOLS_ERROR((-1), "H5Tclose base_type failed"); } /* end if type_class is variable length or array */ if (type_class == H5T_COMPOUND) { @@ -447,7 +447,7 @@ copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, trav_table_ hid_t mtid = H5Tget_member_type(wtype_id, (unsigned)j); H5T_class_t mtclass = H5Tget_class(mtid); if (H5Tclose(mtid) < 0) - H5TOOLS_INFO(H5E_tools_min_id_g, "H5Tclose mtid failed"); + H5TOOLS_ERROR((-1), "H5Tclose mtid failed"); if (mtclass == H5T_REFERENCE) { is_ref = 1; @@ -464,10 +464,10 @@ copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, trav_table_ buf = (void *)HDmalloc((size_t)(nelmts * msize)); if (buf == NULL) { - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDmalloc failed"); + H5TOOLS_GOTO_ERROR((-1), "HDmalloc failed"); } /* end if */ if (H5Aread(attr_id, wtype_id, buf) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aread failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Aread failed"); /*----------------------------------------------------------------- * copy @@ -475,13 +475,13 @@ copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, trav_table_ */ if ((attr_out = H5Acreate2(loc_out, name, wtype_id, space_id, H5P_DEFAULT, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Acreate2 failed on ,%s>", name); + H5TOOLS_GOTO_ERROR((-1), "H5Acreate2 failed on ,%s>", name); if (H5Awrite(attr_out, wtype_id, buf) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Awrite failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Awrite failed"); /*close*/ if (H5Aclose(attr_out) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Aclose failed"); /* Check if we have VL data and string in the attribute's datatype that must * be reclaimed */ @@ -499,17 +499,17 @@ copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p, trav_table_ *--------------------------------------------------------------------- */ if (H5Sclose(space_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sclose failed"); - space_id = -1; + H5TOOLS_GOTO_ERROR((-1), "H5Sclose failed"); + space_id = H5I_INVALID_HID; if (H5Tclose(wtype_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tclose failed"); - wtype_id = -1; + H5TOOLS_GOTO_ERROR((-1), "H5Tclose failed"); + wtype_id = H5I_INVALID_HID; if (H5Tclose(ftype_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tclose failed"); - ftype_id = -1; + H5TOOLS_GOTO_ERROR((-1), "H5Tclose failed"); + ftype_id = H5I_INVALID_HID; if (H5Aclose(attr_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aclose failed"); - attr_id = -1; + H5TOOLS_GOTO_ERROR((-1), "H5Aclose failed"); + attr_id = H5I_INVALID_HID; } /* for u (each attribute) */ done: @@ -546,10 +546,10 @@ done: static int check_options(pack_opt_t *options) { - int ret_value = 0; /*no need to LEAVE() on ERROR: H5TOOLS_ERR_INIT(int, SUCCEED) */ unsigned int i; int k, j, has_cp = 0, has_ck = 0; char slayout[30]; + int ret_value = 0; /*------------------------------------------------------------------------- * Objects to layout @@ -573,10 +573,11 @@ check_options(pack_opt_t *options) break; case H5D_LAYOUT_ERROR: case H5D_NLAYOUTS: - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "invalid layout"); + H5TOOLS_GOTO_ERROR((-1), "invalid layout"); + break; default: strcpy(slayout, "invalid layout\n"); - HGOTO_DONE(FAIL); + H5TOOLS_GOTO_DONE((-1)); } HDprintf(" Apply %s layout to all", slayout); if (H5D_CHUNKED == options->layout_g) { @@ -611,7 +612,7 @@ check_options(pack_opt_t *options) } /* end for each object in options */ if (options->all_layout == 1 && has_ck) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "invalid chunking input: 'all' option is present with other objects"); + H5TOOLS_GOTO_ERROR((-1), "invalid chunking input: 'all' option is present with other objects"); /*------------------------------------------------------------------------- * Objects to filter @@ -669,7 +670,7 @@ check_options(pack_opt_t *options) } /* end for each object in options table */ if (options->all_filter == 1 && has_cp) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "invalid compression input: 'all' option is present with other objects"); + H5TOOLS_GOTO_ERROR((-1), "invalid compression input: 'all' option is present with other objects"); /*------------------------------------------------------------------------- * Check options for the latest format @@ -677,14 +678,14 @@ check_options(pack_opt_t *options) */ if (options->grp_compact < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "invalid maximum number of links to store as header messages"); + H5TOOLS_GOTO_ERROR((-1), "invalid maximum number of links to store as header messages"); if (options->grp_indexed < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "invalid minimum number of links to store in the indexed format"); + H5TOOLS_GOTO_ERROR((-1), "invalid minimum number of links to store in the indexed format"); if (options->grp_indexed > options->grp_compact) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "minimum indexed size is greater than the maximum compact size"); + H5TOOLS_GOTO_ERROR((-1), "minimum indexed size is greater than the maximum compact size"); for (i = 0; i < 8; i++) if (options->msg_size[i] < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "invalid shared message size"); + H5TOOLS_GOTO_ERROR((-1), "invalid shared message size"); /*------------------------------------------------------------------------ * Verify new user userblock options; file name must be present @@ -698,7 +699,7 @@ check_options(pack_opt_t *options) } if (options->ublock_filename == NULL && options->ublock_size != 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "file name missing for user block", options->ublock_filename); + H5TOOLS_GOTO_ERROR((-1), "file name missing for user block", options->ublock_filename); /*------------------------------------------------------------------------ * Verify alignment options; threshold is zero default but alignment not @@ -706,7 +707,7 @@ check_options(pack_opt_t *options) */ if (options->alignment == 0 && options->threshold != 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "alignment for H5Pset_alignment missing"); + H5TOOLS_GOTO_ERROR((-1), "alignment for H5Pset_alignment missing"); done: return ret_value; @@ -724,24 +725,24 @@ done: static int check_objects(const char* fname, pack_opt_t *options) { - hid_t fid = -1; - hid_t did = -1; - hid_t sid = -1; + hid_t fid = H5I_INVALID_HID; + hid_t did = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; unsigned int i; - int ifil; + int ifil; trav_table_t *travt = NULL; - int ret_value = 0; /*no need to LEAVE() on ERROR: H5TOOLS_ERR_INIT(int, SUCCEED) */ + int ret_value = 0; /* nothing to do */ if (options->op_tbl->nelems == 0) - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(0); /*------------------------------------------------------------------------- * open the file *------------------------------------------------------------------------- */ if ((fid = h5tools_fopen(fname, H5F_ACC_RDONLY, H5P_DEFAULT, NULL, NULL, 0)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "h5tools_fopen failed <%s>: %s", fname, H5FOPENERROR); + H5TOOLS_GOTO_ERROR((-1), "h5tools_fopen failed <%s>: %s", fname, H5FOPENERROR); /*------------------------------------------------------------------------- * get the list of objects in the file @@ -755,7 +756,7 @@ check_objects(const char* fname, pack_opt_t *options) /* get the list of objects in the file */ if (h5trav_gettable(fid, travt) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "h5trav_gettable failed"); + H5TOOLS_GOTO_ERROR((-1), "h5trav_gettable failed"); /*------------------------------------------------------------------------- * compare with user supplied list @@ -774,14 +775,14 @@ check_objects(const char* fname, pack_opt_t *options) /* the input object names are present in the file and are valid */ if (h5trav_getindext(name, travt) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "%s Could not find <%s> in file <%s>. Exiting...\n", + H5TOOLS_GOTO_ERROR((-1), "%s Could not find <%s> in file <%s>. Exiting...\n", (options->verbose ? "\n" : ""), name, fname); if (options->verbose) HDprintf("...Found\n"); for (ifil = 0; ifil < obj.nfilters; ifil++) { if (obj.filter[ifil].filtn < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "invalid filter"); + H5TOOLS_GOTO_ERROR((-1), "invalid filter"); /* check for extra filter conditions */ switch (obj.filter[ifil].filtn) { /* chunk size must be smaller than pixels per block */ @@ -800,25 +801,25 @@ check_objects(const char* fname, pack_opt_t *options) } else { if ((did = H5Dopen2(fid, name, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dopen2 failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dopen2 failed"); if ((sid = H5Dget_space(did)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_space failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dget_space failed"); if ((rank = H5Sget_simple_extent_ndims(sid)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sget_simple_extent_ndims failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Sget_simple_extent_ndims failed"); HDmemset(dims, 0, sizeof dims); if (H5Sget_simple_extent_dims(sid, dims, NULL) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sget_simple_extent_dims failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Sget_simple_extent_dims failed"); for (j = 0; j < rank; j++) csize *= dims[j]; if (H5Sclose(sid) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Sclose failed"); if (H5Dclose(did) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dclose failed"); } if (csize < ppb) { HDprintf(" <warning: SZIP settings, chunk size is smaller than pixels per block>\n"); - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(0); } } /* end case SZIP */ break; diff --git a/tools/src/h5repack/h5repack_copy.c b/tools/src/h5repack/h5repack_copy.c index 5d41908..7336125 100644 --- a/tools/src/h5repack/h5repack_copy.c +++ b/tools/src/h5repack/h5repack_copy.c @@ -61,12 +61,11 @@ static void print_user_block(const char *filename, hid_t fid); int copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options) { - int ret_value = 0; - hid_t fidin = -1; - hid_t fidout = -1; - hid_t fcpl_in = -1; /* file creation property list ID for input file */ - hid_t grp_in = -1; /* group ID */ - hid_t gcpl_in = -1; /* group creation property list */ + hid_t fidin = H5I_INVALID_HID; + hid_t fidout = H5I_INVALID_HID; + hid_t fcpl_in = H5I_INVALID_HID; /* file creation property list ID for input file */ + hid_t grp_in = H5I_INVALID_HID; /* group ID */ + hid_t gcpl_in = H5I_INVALID_HID; /* group creation property list */ hid_t fcpl = H5P_DEFAULT; /* file creation property list ID */ hid_t fapl = H5P_DEFAULT; /* file access property list ID */ trav_table_t *travt = NULL; @@ -80,65 +79,66 @@ copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options) hsize_t in_threshold; /* Free-space section threshold from input file */ hsize_t in_pagesize; /* File space page size from input file */ unsigned crt_order_flags; /* group creation order flag */ + int ret_value = 0; /*------------------------------------------------------------------------- * open input file *------------------------------------------------------------------------- */ if ((fidin = h5tools_fopen(fnamein, H5F_ACC_RDONLY, H5P_DEFAULT, NULL, NULL, (size_t) 0)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "h5tools_fopen failed <%s>: %s", fnamein, H5FOPENERROR); + H5TOOLS_GOTO_ERROR((-1), "h5tools_fopen failed <%s>: %s", fnamein, H5FOPENERROR); /* get user block size and file space strategy/persist/threshold */ { if ((fcpl_in = H5Fget_create_plist(fidin)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Fget_create_plist failed to retrieve file creation property list"); + H5TOOLS_GOTO_ERROR((-1), "H5Fget_create_plist failed to retrieve file creation property list"); if (H5Pget_userblock(fcpl_in, &ub_size) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_userblock failed to retrieve userblock size"); + H5TOOLS_GOTO_ERROR((-1), "H5Pget_userblock failed to retrieve userblock size"); /* If the -S option is not set, get "strategy" from the input file */ if(H5Pget_file_space_strategy(fcpl_in, &in_strategy, &in_persist, &in_threshold) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_file_space_strategy failed to retrieve file space strategy"); + H5TOOLS_GOTO_ERROR((-1), "H5Pget_file_space_strategy failed to retrieve file space strategy"); /* If the -G option is not set, get "pagesize" from the input file */ if(H5Pget_file_space_page_size(fcpl_in, &in_pagesize) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_file_space_page_size failed to retrieve file space threshold"); + H5TOOLS_GOTO_ERROR((-1), "H5Pget_file_space_page_size failed to retrieve file space threshold"); /* open root group */ if ((grp_in = H5Gopen2(fidin, "/", H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Gopen2 failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Gopen2 failed"); /* get root group creation property list */ if ((gcpl_in = H5Gget_create_plist(grp_in)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Gget_create_plist failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Gget_create_plist failed"); /* query and set the group creation properties */ if (H5Pget_link_creation_order(gcpl_in, &crt_order_flags) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_link_creation_order failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pget_link_creation_order failed"); if (H5Pclose(fcpl_in) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pclose failed to close property list"); + H5TOOLS_GOTO_ERROR((-1), "H5Pclose failed to close property list"); } if(options->latest) options->low_bound = options->high_bound = H5F_LIBVER_LATEST; /* Create file access property list */ if((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pcreate failed to create file access property list"); + H5TOOLS_GOTO_ERROR((-1), "H5Pcreate failed to create file access property list"); /* It can be default, latest or other settings by users */ if(H5Pset_libver_bounds(fapl, options->low_bound, options->high_bound) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_libver_bounds failed to set format version bounds"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_libver_bounds failed to set format version bounds"); /* Check if we need to create a non-default file creation property list */ if (options->low_bound >= H5F_LIBVER_V18 || ub_size > 0) { /* Create file creation property list */ if ((fcpl = H5Pcreate(H5P_FILE_CREATE)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pcreate failed to create a file creation property list"); + H5TOOLS_GOTO_ERROR((-1), "H5Pcreate failed to create a file creation property list"); if (ub_size > 0) if (H5Pset_userblock(fcpl, ub_size) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_userblock failed to set non-default userblock size"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_userblock failed to set non-default userblock size"); if (options->low_bound >= H5F_LIBVER_V18) { unsigned i = 0, nindex = 0, mesg_type_flags[5], min_mesg_sizes[5]; @@ -146,7 +146,7 @@ copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options) /* Adjust group creation parameters for root group */ /* (So that it is created in "dense storage" form) */ if (H5Pset_link_phase_change(fcpl, (unsigned) options->grp_compact, (unsigned) options->grp_indexed) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_link_phase_change failed to adjust group creation parameters for root group"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_link_phase_change failed to adjust group creation parameters for root group"); for (i = 0; i < 5; i++) { if (options->msg_size[i] > 0) { @@ -182,12 +182,12 @@ copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options) if (nindex > 0) { if (H5Pset_shared_mesg_nindexes(fcpl, nindex) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_shared_mesg_nindexes failed to set the number of shared object header message indexes"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_shared_mesg_nindexes failed to set the number of shared object header message indexes"); /* msg_size[0]=dataspace, 1=datatype, 2=file value, 3=filter pipleline, 4=attribute */ for (i = 0; i < (nindex - 1); i++) if (H5Pset_shared_mesg_index(fcpl, i, mesg_type_flags[i], min_mesg_sizes[i]) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_shared_mesg_index failed to configure the specified shared object header message index"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_shared_mesg_index failed to configure the specified shared object header message index"); } /* if (nindex>0) */ } /* end if */ @@ -205,11 +205,11 @@ print_user_block(fnamein, fidin); if (fcpl == H5P_DEFAULT) /* create a file creation property list */ if ((fcpl = H5Pcreate(H5P_FILE_CREATE)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pcreate failed to create a file creation property list"); + H5TOOLS_GOTO_ERROR((-1), "H5Pcreate failed to create a file creation property list"); /* set user block size */ if (H5Pset_userblock(fcpl, options->ublock_size) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_userblock failed to set userblock size"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_userblock failed to set userblock size"); } /*------------------------------------------------------------------------- @@ -221,10 +221,10 @@ print_user_block(fnamein, fidin); if (fapl == H5P_DEFAULT) /* create a file access property list */ if ((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pcreate failed to create file access property list"); + H5TOOLS_GOTO_ERROR((-1), "H5Pcreate failed to create file access property list"); if (H5Pset_alignment(fapl, options->threshold, options->alignment) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_alignment failed to set alignment"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_alignment failed to set alignment"); } /*------------------------------------------------------------------------- @@ -236,10 +236,10 @@ print_user_block(fnamein, fidin); if (fapl == H5P_DEFAULT) /* create a file access property list */ if ((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pcreate failed to create file access property list"); + H5TOOLS_GOTO_ERROR((-1), "H5Pcreate failed to create file access property list"); if (H5Pset_meta_block_size(fapl, options->meta_block_size) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_meta_block_size failed to set metadata block size"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_meta_block_size failed to set metadata block size"); } /*------------------------------------------------------------------------- @@ -251,10 +251,10 @@ print_user_block(fnamein, fidin); if (fcpl == H5P_DEFAULT) /* create a file creation property list */ if ((fcpl = H5Pcreate(H5P_FILE_CREATE)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pcreate failed to create a file creation property list"); + H5TOOLS_GOTO_ERROR((-1), "H5Pcreate failed to create a file creation property list"); if(H5Pset_link_creation_order(fcpl, crt_order_flags ) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_link_creation_order failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_link_creation_order failed"); /* Set file space info to those from input file */ set_strategy = in_strategy; @@ -279,7 +279,7 @@ print_user_block(fnamein, fidin); /* Set file space information as specified */ if(H5Pset_file_space_strategy(fcpl, set_strategy, set_persist, set_threshold) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_file_space_strategy failed to set file space strategy"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_file_space_strategy failed to set file space strategy"); if(options->fs_pagesize == -1) /* A "0" file space page size is specified by user */ set_pagesize = (hsize_t)0; @@ -288,7 +288,7 @@ print_user_block(fnamein, fidin); if(set_pagesize != FS_PAGESIZE_DEF) /* Set non-default file space page size as specified */ if(H5Pset_file_space_page_size(fcpl, set_pagesize) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_file_space_page_size failed to set file space page size"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_file_space_page_size failed to set file space page size"); /*------------------------------------------------------------------------- * create the output file @@ -298,7 +298,7 @@ print_user_block(fnamein, fidin); HDprintf("Making new file ...\n"); if ((fidout = H5Fcreate(fnameout, H5F_ACC_TRUNC, fcpl, fapl)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Fcreate could not create file <%s>:", fnameout); + H5TOOLS_GOTO_ERROR((-1), "H5Fcreate could not create file <%s>:", fnameout); /*------------------------------------------------------------------------- * write a new user block if requested @@ -306,7 +306,7 @@ print_user_block(fnamein, fidin); */ if (options->ublock_size > 0) if (copy_user_block(options->ublock_filename, fnameout, options->ublock_size) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "Could not copy user block. Exiting..."); + H5TOOLS_GOTO_ERROR((-1), "Could not copy user block. Exiting..."); /*------------------------------------------------------------------------- * get list of objects @@ -321,14 +321,14 @@ print_user_block(fnamein, fidin); if (travt) { /* get the list of objects in the file */ if (h5trav_gettable(fidin, travt) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "h5trav_gettable failed"); + H5TOOLS_GOTO_ERROR((-1), "h5trav_gettable failed"); /*------------------------------------------------------------------------- * do the copy *------------------------------------------------------------------------- */ if (do_copy_objects(fidin, fidout, travt, options) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "do_copy_objects from <%s> could not copy data to <%s>", fnamein, fnameout); + H5TOOLS_GOTO_ERROR((-1), "do_copy_objects from <%s> could not copy data to <%s>", fnamein, fnameout); /*------------------------------------------------------------------------- * do the copy of referenced objects @@ -336,7 +336,7 @@ print_user_block(fnamein, fidin); *------------------------------------------------------------------------- */ if (do_copy_refobjs(fidin, fidout, travt, options) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "do_copy_refobjs from <%s> could not copy data to <%s>", fnamein, fnameout); + H5TOOLS_GOTO_ERROR((-1), "do_copy_refobjs from <%s> could not copy data to <%s>", fnamein, fnameout); } /*------------------------------------------------------------------------- @@ -346,7 +346,7 @@ print_user_block(fnamein, fidin); if (ub_size > 0 && options->ublock_size == 0) if (copy_user_block(fnamein, fnameout, ub_size) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "Could not copy user block. Exiting..."); + H5TOOLS_GOTO_ERROR((-1), "Could not copy user block. Exiting..."); done: H5E_BEGIN_TRY { @@ -402,7 +402,6 @@ int get_hyperslab(hid_t dcpl_id, int rank_dset, hsize_t dims_dset[], size_t size_datum, hsize_t dims_hslab[], hsize_t * hslab_nbytes_p) { - int ret_value = 0; int k; H5D_layout_t dset_layout; int rank_chunk; @@ -413,6 +412,7 @@ get_hyperslab(hid_t dcpl_id, int rank_dset, hsize_t dims_dset[], hsize_t chunk_dims_map[H5S_MAX_RANK]; /* mapped chunk dimentions */ hsize_t hs_dims_map[H5S_MAX_RANK]; /* mapped hyperslab dimentions */ hsize_t hslab_nbytes; /* size of hyperslab in byte */ + int ret_value = 0; /* init to set as size of a data element */ hslab_nbytes = size_datum; @@ -425,7 +425,7 @@ get_hyperslab(hid_t dcpl_id, int rank_dset, hsize_t dims_dset[], /* get chunk dims */ rank_chunk = H5Pget_chunk(dcpl_id, rank_dset, dims_chunk); if (rank_chunk < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_chunk failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pget_chunk failed"); for (k = rank_dset; k > 0; --k) size_chunk *= dims_chunk[k - 1]; @@ -487,7 +487,7 @@ get_hyperslab(hid_t dcpl_id, int rank_dset, hsize_t dims_dset[], hslab_nbytes *= dims_hslab[k - 1]; if (hslab_nbytes <= 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "calculate total size for the hyperslab failed"); + H5TOOLS_GOTO_ERROR((-1), "calculate total size for the hyperslab failed"); } } } @@ -511,7 +511,7 @@ get_hyperslab(hid_t dcpl_id, int rank_dset, hsize_t dims_dset[], hslab_nbytes *= dims_hslab[k - 1]; if (hslab_nbytes <= 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "calculate total size for the hyperslab failed"); + H5TOOLS_GOTO_ERROR((-1), "calculate total size for the hyperslab failed"); } } @@ -580,20 +580,19 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, pack_opt_t *options) /* repack options */ { - int ret_value = 0; - hid_t grp_in = -1; /* group ID */ - hid_t grp_out = -1; /* group ID */ - hid_t dset_in = -1; /* read dataset ID */ - hid_t dset_out = -1; /* write dataset ID */ - hid_t gcpl_in = -1; /* group creation property list */ - hid_t gcpl_out = -1; /* group creation property list */ - hid_t type_in = -1; /* named type ID */ - hid_t type_out = -1; /* named type ID */ - hid_t dcpl_in = -1; /* dataset creation property list ID */ - hid_t dcpl_out = -1; /* dataset creation property list ID */ - hid_t f_space_id = -1; /* file space ID */ - hid_t ftype_id = -1; /* file type ID */ - hid_t wtype_id = -1; /* read/write type ID */ + hid_t grp_in = H5I_INVALID_HID; /* group ID */ + hid_t grp_out = H5I_INVALID_HID; /* group ID */ + hid_t dset_in = H5I_INVALID_HID; /* read dataset ID */ + hid_t dset_out = H5I_INVALID_HID; /* write dataset ID */ + hid_t gcpl_in = H5I_INVALID_HID; /* group creation property list */ + hid_t gcpl_out = H5I_INVALID_HID; /* group creation property list */ + hid_t type_in = H5I_INVALID_HID; /* named type ID */ + hid_t type_out = H5I_INVALID_HID; /* named type ID */ + hid_t dcpl_in = H5I_INVALID_HID; /* dataset creation property list ID */ + hid_t dcpl_out = H5I_INVALID_HID; /* dataset creation property list ID */ + hid_t f_space_id = H5I_INVALID_HID; /* file space ID */ + hid_t ftype_id = H5I_INVALID_HID; /* file type ID */ + hid_t wtype_id = H5I_INVALID_HID; /* read/write type ID */ named_dt_t *named_dt_head = NULL; /* Pointer to the stack of named datatypes copied */ size_t msize; /* size of type */ hsize_t nelmts; /* number of elements in dataset */ @@ -617,6 +616,7 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, htri_t is_named; hbool_t limit_maxdims; hsize_t size_dset; + int ret_value = 0; /*------------------------------------------------------------------------- * copy the supplied object list @@ -649,22 +649,22 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, /* open input group */ if ((grp_in = H5Gopen2(fidin, travt->objs[i].name, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Gopen2 failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Gopen2 failed"); /* get input group creation property list */ if ((gcpl_in = H5Gget_create_plist(grp_in)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Gget_create_plist failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Gget_create_plist failed"); /* query and set the group creation properties */ if (H5Pget_link_creation_order(gcpl_in, &crt_order_flags) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_link_creation_order failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pget_link_creation_order failed"); /* set up group creation property list */ if ((gcpl_out = H5Pcreate(H5P_GROUP_CREATE)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pcreate failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pcreate failed"); if (H5Pset_link_creation_order(gcpl_out, crt_order_flags) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_link_creation_order failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_link_creation_order failed"); /*------------------------------------------------------------------------- * the root is a special case, we get an ID for the root group @@ -673,15 +673,15 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, */ if (HDstrcmp(travt->objs[i].name, "/") == 0) { if ((grp_out = H5Gopen2(fidout, "/", H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Gopen2 failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Gopen2 failed"); } else { if (options->grp_compact > 0 || options->grp_indexed > 0) if (H5Pset_link_phase_change(gcpl_out, (unsigned) options->grp_compact, (unsigned) options->grp_indexed) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_link_phase_change failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_link_phase_change failed"); if ((grp_out = H5Gcreate2(fidout, travt->objs[i].name, H5P_DEFAULT, gcpl_out, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Gcreate2 failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Gcreate2 failed"); } /*------------------------------------------------------------------------- @@ -689,16 +689,16 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, *------------------------------------------------------------------------- */ if (copy_attr(grp_in, grp_out, &named_dt_head, travt, options) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "copy_attr failed"); + H5TOOLS_GOTO_ERROR((-1), "copy_attr failed"); if (H5Pclose(gcpl_out) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pclose failed"); if (H5Pclose(gcpl_in) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pclose failed"); if (H5Gclose(grp_out) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Gclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Gclose failed"); if (H5Gclose(grp_in) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Gclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Gclose failed"); break; @@ -740,23 +740,23 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, /* early detection of references */ if ((dset_in = H5Dopen2(fidin, travt->objs[i].name, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dopen2 failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dopen2 failed"); if ((ftype_id = H5Dget_type(dset_in)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_type failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dget_type failed"); if (H5T_REFERENCE == H5Tget_class(ftype_id)) is_ref = 1; /* Check if the datatype is committed */ if ((is_named = H5Tcommitted(ftype_id)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tcommitted failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tcommitted failed"); if (is_named) if ((wtype_id = copy_named_datatype(ftype_id, fidout, &named_dt_head, travt, options)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "copy_named_datatype failed"); + H5TOOLS_GOTO_ERROR((-1), "copy_named_datatype failed"); if (H5Tclose(ftype_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tclose failed"); if (H5Dclose(dset_in) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dclose failed"); /*------------------------------------------------------------------------- * check if we should use H5Ocopy or not @@ -770,20 +770,20 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, int j; if ((dset_in = H5Dopen2(fidin, travt->objs[i].name, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dopen2 failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dopen2 failed"); if ((f_space_id = H5Dget_space(dset_in)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_space failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dget_space failed"); if ((ftype_id = H5Dget_type(dset_in)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_type failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dget_type failed"); if ((dcpl_in = H5Dget_create_plist(dset_in)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_create_plist failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dget_create_plist failed"); if ((rank = H5Sget_simple_extent_ndims(f_space_id)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sget_simple_extent_ndims failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Sget_simple_extent_ndims failed"); HDmemset(dims, 0, sizeof dims); if (H5Sget_simple_extent_dims(f_space_id, dims, NULL) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sget_simple_extent_dims failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Sget_simple_extent_dims failed"); if (H5Dget_space_status(dset_in, &space_status) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_space_status failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dget_space_status failed"); /* If the input dataset has external storage, it must be contiguous. * Accordingly, there would be no filter or chunk properties to preserve, @@ -792,10 +792,10 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, */ if (H5Pget_external_count(dcpl_in)) { if ((dcpl_out = H5Pcreate(H5P_DATASET_CREATE)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pcreate failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pcreate failed"); } else if ((dcpl_out = H5Pcopy(dcpl_in)) < 0) { - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pcopy failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pcopy failed"); } nelmts = 1; @@ -811,7 +811,7 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, } if ((msize = H5Tget_size(wtype_id)) == 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tget_size failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tget_size failed"); /* size of current dset */ size_dset = nelmts * msize; @@ -848,7 +848,7 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, /* apply the filter */ if (apply_s) if (apply_filters(travt->objs[i].name, rank, dims, msize, dcpl_out, options, &has_filter) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "apply_filters failed"); + H5TOOLS_GOTO_ERROR((-1), "apply_filters failed"); /* only if layout change requested for entire file or * individual obj */ @@ -888,13 +888,13 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, *------------------------------------------------------------------------- */ dset_out = H5Dcreate2(fidout, travt->objs[i].name, wtype_id, f_space_id, H5P_DEFAULT, dcpl_out, H5P_DEFAULT); - if (dset_out == FAIL) { - H5Epush2(H5tools_ERR_STACK_g, __FILE__, FUNC, __LINE__, H5tools_ERR_CLS_g, H5E_tools_g, H5E_tools_min_id_g, "H5Dcreate2 failed"); + if (dset_out == H5I_INVALID_HID) { + H5TOOLS_INFO("H5Dcreate2 failed"); if (options->verbose) HDprintf(" warning: could not create dataset <%s>. Applying original settings\n", travt->objs[i].name); if ((dset_out = H5Dcreate2(fidout, travt->objs[i].name, wtype_id, f_space_id, H5P_DEFAULT, dcpl_in, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dcreate2 failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dcreate2 failed"); apply_f = 0; } /* end if retry dataset create */ @@ -911,15 +911,15 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, if (buf != NULL) { if(H5Dread(dset_in, wtype_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dread failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dread failed"); if(H5Dwrite(dset_out, wtype_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dwrite failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dwrite failed"); /* Check if we have VL data in the dataset's * datatype that must be reclaimed */ if (TRUE == H5Tdetect_class(wtype_id, H5T_VLEN)) if (H5Treclaim(wtype_id, f_space_id, H5P_DEFAULT, buf) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Treclaim failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Treclaim failed"); if (buf != NULL) { /* TODO: is buf potentially released by H5Dvlen_reclaim()? */ HDfree(buf); @@ -946,7 +946,7 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, hsize_t zero[8]; /*vector of zeros */ int k; H5D_layout_t dset_layout; - hid_t dcpl_tmp = -1; /* dataset creation property list ID */ + hid_t dcpl_tmp = H5I_INVALID_HID; /* dataset creation property list ID */ /* check if we have VL data in the dataset's datatype */ if (H5Tdetect_class(wtype_id, H5T_VLEN) == TRUE) @@ -965,11 +965,11 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, /* get hyperslab dims and size in byte */ if (get_hyperslab(dcpl_tmp, rank, dims, p_type_nbytes, hslab_dims, &hslab_nbytes) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "get_hyperslab failed"); + H5TOOLS_GOTO_ERROR((-1), "get_hyperslab failed"); hslab_buf = HDmalloc((size_t)hslab_nbytes); if (hslab_buf == NULL) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "can't allocate space for hyperslab"); + H5TOOLS_GOTO_ERROR((-1), "can't allocate space for hyperslab"); hslab_nelmts = hslab_nbytes / p_type_nbytes; hslab_space = H5Screate_simple(1, &hslab_nelmts, NULL); @@ -993,9 +993,9 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, } if (H5Sselect_hyperslab(f_space_id, H5S_SELECT_SET, hs_sel_offset, NULL, hs_sel_count, NULL) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sselect_hyperslab failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Sselect_hyperslab failed"); if (H5Sselect_hyperslab(hslab_space, H5S_SELECT_SET, zero, NULL, &hs_select_nelmts, NULL) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sselect_hyperslab failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Sselect_hyperslab failed"); } /* end if rank > 0 */ else { H5Sselect_all(f_space_id); @@ -1004,9 +1004,9 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, } /* end (else) rank == 0 */ if(H5Dread(dset_in, wtype_id, hslab_space, f_space_id, H5P_DEFAULT, hslab_buf) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dread failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dread failed"); if(H5Dwrite(dset_out, wtype_id, hslab_space, f_space_id, H5P_DEFAULT, hslab_buf) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dwrite failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dwrite failed"); /* reclaim any VL memory, if necessary */ if (vl_data) @@ -1066,10 +1066,10 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, *------------------------------------------------------------------------- */ if (copy_attr(dset_in, dset_out, &named_dt_head, travt, options) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "copy_attr failed"); + H5TOOLS_GOTO_ERROR((-1), "copy_attr failed"); if (H5Dclose(dset_out) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dclose failed"); } /* end if not a reference */ } /* end if h5tools_canreadf (filter availability check) */ @@ -1078,32 +1078,32 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, *------------------------------------------------------------------------- */ if (H5Tclose(ftype_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tclose failed"); if (H5Tclose(wtype_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tclose failed"); if (H5Pclose(dcpl_in) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pclose failed"); if (H5Pclose(dcpl_out) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pclose failed"); if (H5Sclose(f_space_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Sclose failed"); if (H5Dclose(dset_in) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dclose failed"); } /*------------------------------------------------------------------------- * We do not have request for filter/chunking; use H5Ocopy instead *------------------------------------------------------------------------- */ else { - hid_t pid = -1; + hid_t pid = H5I_INVALID_HID; /* create property to pass copy options */ if ((pid = H5Pcreate(H5P_OBJECT_COPY)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pcreate failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pcreate failed"); /* set options for object copy */ if (H5Pset_copy_object(pid, H5O_COPY_WITHOUT_ATTR_FLAG) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_copy_object failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_copy_object failed"); if (H5Ocopy(fidin, /* Source file or group identifier */ travt->objs[i].name, /* Name of the source object to be copied */ @@ -1111,25 +1111,25 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, travt->objs[i].name, /* Name of the destination object */ pid, /* Properties which apply to the copy */ H5P_DEFAULT) < 0) /* Properties which apply to the new hard link */ - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Ocopy failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Ocopy failed"); if (H5Pclose(pid) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pclose failed"); /*------------------------------------------------------------------------- * Copy attrs manually *------------------------------------------------------------------------- */ if ((dset_in = H5Dopen2(fidin, travt->objs[i].name, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dopen2 failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dopen2 failed"); if ((dset_out = H5Dopen2(fidout, travt->objs[i].name, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dopen2 failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dopen2 failed"); if (copy_attr(dset_in, dset_out, &named_dt_head, travt, options) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "copy_attr failed"); + H5TOOLS_GOTO_ERROR((-1), "copy_attr failed"); if (H5Dclose(dset_in) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dclose failed"); if (H5Dclose(dset_out) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dclose failed"); if (options->verbose) HDprintf(FORMAT_OBJ, "dset", travt->objs[i].name); @@ -1146,28 +1146,28 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, HDprintf(FORMAT_OBJ, "type", travt->objs[i].name); if ((type_in = H5Topen2(fidin, travt->objs[i].name, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Topen2 failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Topen2 failed"); /* Copy the datatype anonymously */ if ((type_out = copy_named_datatype(type_in, fidout, &named_dt_head, travt, options)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "copy_named_datatype failed"); + H5TOOLS_GOTO_ERROR((-1), "copy_named_datatype failed"); /* Link in to group structure */ if (H5Lcreate_hard(type_out, ".", fidout, travt->objs[i].name, H5P_DEFAULT, H5P_DEFAULT) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Lcreate_hard failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Lcreate_hard failed"); /*------------------------------------------------------------------------- * copy attrs *------------------------------------------------------------------------- */ if (copy_attr(type_in, type_out, &named_dt_head, travt, options) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "copy_attr failed"); + H5TOOLS_GOTO_ERROR((-1), "copy_attr failed"); if (H5Tclose(type_in) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tclose failed"); if (H5Tclose(type_out) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tclose failed"); - type_out = -1; /* named datatypes stack, named_dt_head, manages allocation */ + H5TOOLS_GOTO_ERROR((-1), "H5Tclose failed"); + type_out = H5I_INVALID_HID; /* named datatypes stack, named_dt_head, manages allocation */ break; @@ -1185,14 +1185,14 @@ do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt, HDprintf(FORMAT_OBJ, "link", travt->objs[i].name); if (H5Lcopy(fidin, travt->objs[i].name, fidout, travt->objs[i].name, H5P_DEFAULT, H5P_DEFAULT) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Lcopy failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Lcopy failed"); if (options->verbose) HDprintf(FORMAT_OBJ, "link", travt->objs[i].name); break; default: - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "Object type not found"); + H5TOOLS_GOTO_ERROR((-1), "Object type not found"); } /* switch */ } /* end for each object to traverse */ } /* end if there are objects */ @@ -1203,7 +1203,7 @@ done: * because of reference counting */ if (0 == ret_value && named_dt_head != NULL) { if (named_datatype_free(&named_dt_head, 0) < 0) - H5TOOLS_INFO(H5E_tools_min_id_g, "named_datatype_free failed"); + H5TOOLS_ERROR((-1), "named_datatype_free failed"); } else H5E_BEGIN_TRY { @@ -1354,16 +1354,16 @@ print_dataset_info(hid_t dcpl_id, char *objname, double ratio, int pr) static int copy_user_block(const char *infile, const char *outfile, hsize_t size) { - int ret_value = 0; int infid = -1, outfid = -1; /* File descriptors */ + int ret_value = 0; /* User block must be any power of 2 equal to 512 or greater (512, 1024, 2048, etc.) */ /* Open files */ if ((infid = HDopen(infile, O_RDONLY)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDopen failed input file <%s>", infile); + H5TOOLS_GOTO_ERROR((-1), "HDopen failed input file <%s>", infile); if ((outfid = HDopen(outfile, O_WRONLY)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDopen failed output file <%s>", outfile); + H5TOOLS_GOTO_ERROR((-1), "HDopen failed output file <%s>", outfile); /* Copy the userblock from the input file to the output file */ while (size > 0) { @@ -1377,7 +1377,7 @@ copy_user_block(const char *infile, const char *outfile, hsize_t size) else nread = HDread(infid, rbuf, (size_t)size); if (nread < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDread failed to read userblock"); + H5TOOLS_GOTO_ERROR((-1), "HDread failed to read userblock"); /* Write buffer to destination file */ /* (compensating for interrupted writes & checking for errors, etc.) */ @@ -1390,7 +1390,7 @@ copy_user_block(const char *infile, const char *outfile, hsize_t size) nwritten = HDwrite(outfid, wbuf, (size_t)nbytes); } while (-1 == nwritten && EINTR == errno); if (-1 == nwritten) /* error */ - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDwrite failed"); + H5TOOLS_GOTO_ERROR((-1), "HDwrite failed"); HDassert(nwritten > 0); HDassert(nwritten <= nbytes); @@ -1426,29 +1426,29 @@ static void print_user_block(const char *filename, hid_t fid) { - int ret_value = 0; int fh = -1; /* file handle */ hsize_t ub_size; /* user block size */ hsize_t size; /* size read */ - hid_t fcpl = -1; /* file creation property list ID for HDF5 file */ + hid_t fcpl = H5I_INVALID_HID; /* file creation property list ID for HDF5 file */ int i; + int ret_value = 0; /* get user block size */ if ((fcpl = H5Fget_create_plist(fid)) < 0) { - H5TOOLS_GOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Fget_create_plist failed to retrieve file creation property list"); + H5TOOLS_GOTO_ERROR((-1), "H5Fget_create_plist failed to retrieve file creation property list"); } if (H5Pget_userblock(fcpl, &ub_size) < 0) { - H5TOOLS_GOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pget_userblock failed to retrieve userblock size"); + H5TOOLS_GOTO_ERROR((-1), "H5Pget_userblock failed to retrieve userblock size"); } if (H5Pclose(fcpl) < 0) { - H5TOOLS_GOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed to close property list"); + H5TOOLS_GOTO_ERROR((-1), "H5Pclose failed to close property list"); } /* open file */ if ((fh = HDopen(filename, O_RDONLY)) < 0) { - H5TOOLS_GOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDopen failed to open file <%s>", filename); + H5TOOLS_GOTO_ERROR((-1), "HDopen failed to open file <%s>", filename); } size = ub_size; @@ -1472,7 +1472,7 @@ print_user_block(const char *filename, hid_t fid) HDprintf("\n"); if (nread < 0) { - H5TOOLS_GOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "nread < 0"); + H5TOOLS_GOTO_ERROR((-1), "nread < 0"); } /* update size of userblock left to transfer */ diff --git a/tools/src/h5repack/h5repack_filters.c b/tools/src/h5repack/h5repack_filters.c index 891de25..d1179fb 100644 --- a/tools/src/h5repack/h5repack_filters.c +++ b/tools/src/h5repack/h5repack_filters.c @@ -36,35 +36,35 @@ static int aux_copy_obj(hid_t dcpl_id, /* dataset creation property list */ const char* name, /* object name from traverse list */ pack_info_t *objout /*OUT*/) /* info about object to filter */ { - int ret_value = 0; /*no need to LEAVE() on ERROR: H5TOOLS_ERR_INIT(int, SUCCEED) */ int nfilters; /* number of filters in DCPL */ char f_objname[256]; /* filter objname */ H5D_layout_t layout; int rank; /* rank of dataset */ hsize_t chsize[64]; /* chunk size in elements */ - int i; - unsigned u; + int i; + unsigned u; + int ret_value = 0; /* get information about input filters */ if ((nfilters = H5Pget_nfilters(dcpl_id)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_nfilters failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pget_nfilters failed"); /* copy filter_info_t structure */ for (i = 0; i < nfilters; i++) { if ((objout->filter[i].filtn = H5Pget_filter2(dcpl_id, (unsigned) i, &objout->filter[i].filt_flag, &objout->filter[i].cd_nelmts, objout->filter[i].cd_values, sizeof(f_objname), f_objname, NULL)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_filter2 failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pget_filter2 failed"); } objout->nfilters = nfilters; HDstrcpy(objout->path, name); if ((layout = H5Pget_layout(dcpl_id)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_layout failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pget_layout failed"); objout->layout = layout; if (layout == H5D_CHUNKED) { if ((rank = H5Pget_chunk(dcpl_id, NELMTS(chsize), chsize/*out*/)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_chunk failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pget_chunk failed"); objout->chunk.rank = rank; for (u = 0; u < (unsigned)rank; u++) objout->chunk.chunk_lengths[u] = chsize[u]; @@ -238,18 +238,18 @@ int apply_filters(const char* name, /* object name from traverse list */ pack_opt_t *options, /* repack options */ int *has_filter) /* (OUT) object NAME has a filter */ { - int ret_value = 0; /*no need to LEAVE() on ERROR: H5TOOLS_ERR_INIT(int, SUCCEED) */ - int nfilters; /* number of filters in DCPL */ - hsize_t chsize[64]; /* chunk size in elements */ + int nfilters; /* number of filters in DCPL */ + hsize_t chsize[64]; /* chunk size in elements */ H5D_layout_t layout; - int i; - pack_info_t obj; - pack_info_t filtobj; + int i; + pack_info_t obj; + pack_info_t filtobj; + int ret_value = 0; *has_filter = 0; if (rank == 0) /* scalar dataset, do not apply */ - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(0); /*------------------------------------------------------------------------- * initialize the assigment object @@ -263,11 +263,11 @@ int apply_filters(const char* name, /* object name from traverse list */ *------------------------------------------------------------------------- */ if (aux_assign_obj(name, options, &obj) == 0) - HGOTO_DONE(0); + H5TOOLS_GOTO_DONE(0); /* get information about input filters */ if ((nfilters = H5Pget_nfilters(dcpl_id)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_nfilters failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pget_nfilters failed"); /*------------------------------------------------------------------------- @@ -279,12 +279,12 @@ int apply_filters(const char* name, /* object name from traverse list */ if (nfilters && obj.nfilters) { *has_filter = 1; if (H5Premove_filter(dcpl_id, H5Z_FILTER_ALL) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Premove_filter failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Premove_filter failed"); } else if(nfilters) { *has_filter = 1; if (aux_copy_obj(dcpl_id, name, &filtobj) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "aux_copy_obj failed"); + H5TOOLS_GOTO_ERROR((-1), "aux_copy_obj failed"); } /*------------------------------------------------------------------------- @@ -294,11 +294,11 @@ int apply_filters(const char* name, /* object name from traverse list */ */ if (obj.layout == -1) { if ((layout = H5Pget_layout(dcpl_id)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_layout failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pget_layout failed"); if (layout == H5D_CHUNKED) { if ((rank = H5Pget_chunk(dcpl_id, NELMTS(chsize), chsize/*out*/)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_chunk failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pget_chunk failed"); obj.layout = H5D_CHUNKED; obj.chunk.rank = rank; for (i = 0; i < rank; i++) @@ -340,7 +340,7 @@ int apply_filters(const char* name, /* object name from traverse list */ for (i = rank; i > 0; --i) { hsize_t size = 0; if(sm_nbytes == 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "number of bytes per stripmine must be > 0"); + H5TOOLS_GOTO_ERROR((-1), "number of bytes per stripmine must be > 0"); size = H5TOOLS_BUFSIZE / sm_nbytes; if (size == 0) /* datum size > H5TOOLS_BUFSIZE */ size = 1; @@ -355,7 +355,7 @@ int apply_filters(const char* name, /* object name from traverse list */ for (i = 0; i < obj.nfilters; i++) { if (obj.filter[i].filtn < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "invalid filter"); + H5TOOLS_GOTO_ERROR((-1), "invalid filter"); switch (obj.filter[i].filtn) { /*------------------------------------------------------------------------- @@ -376,9 +376,9 @@ int apply_filters(const char* name, /* object name from traverse list */ aggression = obj.filter[i].cd_values[0]; /* set up for deflated data */ if (H5Pset_chunk(dcpl_id, obj.chunk.rank, obj.chunk.chunk_lengths) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_chunk failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_chunk failed"); if (H5Pset_deflate(dcpl_id, aggression) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_deflate failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_deflate failed"); } break; @@ -396,9 +396,9 @@ int apply_filters(const char* name, /* object name from traverse list */ /* set up for szip data */ if (H5Pset_chunk(dcpl_id, obj.chunk.rank, obj.chunk.chunk_lengths) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_chunk failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_chunk failed"); if (H5Pset_szip(dcpl_id, options_mask, pixels_per_block) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_szip failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_szip failed"); } break; @@ -408,9 +408,9 @@ int apply_filters(const char* name, /* object name from traverse list */ */ case H5Z_FILTER_SHUFFLE: if (H5Pset_chunk(dcpl_id, obj.chunk.rank, obj.chunk.chunk_lengths) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_chunk failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_chunk failed"); if (H5Pset_shuffle(dcpl_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_shuffle failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_shuffle failed"); break; /*------------------------------------------------------------------------- @@ -419,9 +419,9 @@ int apply_filters(const char* name, /* object name from traverse list */ */ case H5Z_FILTER_FLETCHER32: if (H5Pset_chunk(dcpl_id, obj.chunk.rank, obj.chunk.chunk_lengths) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_chunk failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_chunk failed"); if (H5Pset_fletcher32(dcpl_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_fletcher32 failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_fletcher32 failed"); break; /*----------- ------------------------------------------------------------- * H5Z_FILTER_NBIT , NBIT compression @@ -429,9 +429,9 @@ int apply_filters(const char* name, /* object name from traverse list */ */ case H5Z_FILTER_NBIT: if (H5Pset_chunk(dcpl_id, obj.chunk.rank, obj.chunk.chunk_lengths) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_chunk failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_chunk failed"); if (H5Pset_nbit(dcpl_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_nbit failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_nbit failed"); break; /*----------- ------------------------------------------------------------- * H5Z_FILTER_SCALEOFFSET , scale+offset compression @@ -446,19 +446,19 @@ int apply_filters(const char* name, /* object name from traverse list */ scale_factor = (int) obj.filter[i].cd_values[1]; if (H5Pset_chunk(dcpl_id, obj.chunk.rank, obj.chunk.chunk_lengths) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_chunk failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_chunk failed"); if (H5Pset_scaleoffset(dcpl_id, scale_type, scale_factor) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_scaleoffset failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_scaleoffset failed"); } break; default: { if (H5Pset_chunk(dcpl_id, obj.chunk.rank, obj.chunk.chunk_lengths) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_chunk failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_chunk failed"); if (H5Pset_filter(dcpl_id, obj.filter[i].filtn, obj.filter[i].filt_flag, obj.filter[i].cd_nelmts, obj.filter[i].cd_values) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_filter failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_filter failed"); } break; } /* switch */ @@ -469,10 +469,10 @@ int apply_filters(const char* name, /* object name from traverse list */ if (filtobj.nfilters) { for (i = 0; i < filtobj.nfilters; i++) { if (filtobj.filter[i].filtn < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "invalid filter"); + H5TOOLS_GOTO_ERROR((-1), "invalid filter"); if (H5Zfilter_avail(filtobj.filter[i].filtn) <= 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "%d filter unavailable", filtobj.filter[i].filtn); + H5TOOLS_GOTO_ERROR((-1), "%d filter unavailable", filtobj.filter[i].filtn); } /* for */ } /* nfilters */ @@ -484,20 +484,20 @@ int apply_filters(const char* name, /* object name from traverse list */ if (obj.layout >= 0) { /* a layout was defined */ if (H5Pset_layout(dcpl_id, obj.layout) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_layout failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_layout failed"); if (H5D_CHUNKED == obj.layout) { if (H5Pset_chunk(dcpl_id, obj.chunk.rank, obj.chunk.chunk_lengths) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_chunk failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_chunk failed"); } else if (H5D_COMPACT == obj.layout) { if (H5Pset_alloc_time(dcpl_id, H5D_ALLOC_TIME_EARLY) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_alloc_time failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pset_alloc_time failed"); } /* remove filters for the H5D_CONTIGUOUS case */ else if (H5D_CONTIGUOUS == obj.layout) { if (H5Premove_filter(dcpl_id, H5Z_FILTER_ALL) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Premove_filter failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Premove_filter failed"); } } diff --git a/tools/src/h5repack/h5repack_opttable.c b/tools/src/h5repack/h5repack_opttable.c index 9d35c4f..56fc12d 100644 --- a/tools/src/h5repack/h5repack_opttable.c +++ b/tools/src/h5repack/h5repack_opttable.c @@ -24,7 +24,8 @@ *------------------------------------------------------------------------- */ -void init_packobject(pack_info_t *obj) { +void init_packobject(pack_info_t *obj) +{ int j, k; HDstrcpy(obj->path, "\0"); @@ -49,11 +50,12 @@ void init_packobject(pack_info_t *obj) { *------------------------------------------------------------------------- */ -static void aux_tblinsert_filter(pack_opttbl_t *table, unsigned int I, filter_info_t filt) { +static void aux_tblinsert_filter(pack_opttbl_t *table, unsigned int I, filter_info_t filt) +{ if (table->objs[I].nfilters < H5_REPACK_MAX_NFILTERS) table->objs[I].filter[table->objs[I].nfilters++] = filt; else - H5TOOLS_INFO(H5E_tools_min_id_g, "cannot insert the filter in this object. Maximum capacity exceeded"); + H5TOOLS_INFO("cannot insert the filter in this object. Maximum capacity exceeded"); } /*------------------------------------------------------------------------- @@ -64,7 +66,8 @@ static void aux_tblinsert_filter(pack_opttbl_t *table, unsigned int I, filter_in * Return: void *------------------------------------------------------------------------- */ -static void aux_tblinsert_layout(pack_opttbl_t *table, unsigned int I, pack_info_t *pack) { +static void aux_tblinsert_layout(pack_opttbl_t *table, unsigned int I, pack_info_t *pack) +{ int k; table->objs[I].layout = pack->layout; @@ -97,18 +100,20 @@ static int aux_inctable(pack_opttbl_t *table, unsigned n_objs) { unsigned u; + int ret_value = 0; table->size += n_objs; table->objs = (pack_info_t*) HDrealloc(table->objs, table->size * sizeof(pack_info_t)); if (table->objs == NULL) { - H5TOOLS_INFO(H5E_tools_min_id_g, "not enough memory for options table"); - return -1; + H5TOOLS_INFO("not enough memory for options table"); + ret_value = -1; + } + else { + for (u = table->nelems; u < table->size; u++) + init_packobject(&table->objs[u]); } - for (u = table->nelems; u < table->size; u++) - init_packobject(&table->objs[u]); - - return 0; + return ret_value; } @@ -123,25 +128,25 @@ aux_inctable(pack_opttbl_t *table, unsigned n_objs) int options_table_init(pack_opttbl_t **tbl) { unsigned int i; pack_opttbl_t *table; + int ret_value = 0; if (NULL == (table = (pack_opttbl_t *) HDmalloc(sizeof(pack_opttbl_t)))) { - H5TOOLS_INFO(H5E_tools_min_id_g, "not enough memory for options table"); - return -1; + H5TOOLS_GOTO_ERROR((-1), "not enough memory for options table"); } table->size = 30; table->nelems = 0; if (NULL == (table->objs = (pack_info_t*) HDmalloc(table->size * sizeof(pack_info_t)))) { - H5TOOLS_INFO(H5E_tools_min_id_g, "not enough memory for options table"); HDfree(table); - return -1; + H5TOOLS_GOTO_ERROR((-1), "not enough memory for options table"); } for (i = 0; i < table->size; i++) init_packobject(&table->objs[i]); *tbl = table; - return 0; +done: + return ret_value; } @@ -174,6 +179,7 @@ options_add_layout(obj_list_t *obj_list, unsigned n_objs, pack_info_t *pack, pa unsigned i, j, I; unsigned added = 0; hbool_t found = FALSE; + int ret_value = 0; /* increase the size of the collection by N_OBJS if necessary */ if (table->nelems + n_objs >= table->size) @@ -190,7 +196,7 @@ options_add_layout(obj_list_t *obj_list, unsigned n_objs, pack_info_t *pack, pa if (HDstrcmp(obj_list[j].obj,table->objs[i].path) == 0) { /* already chunk info inserted for this one; exit */ if (table->objs[i].chunk.rank > 0) { - H5TOOLS_INFO(H5E_tools_min_info_id_g, "chunk information already inserted for <%s>\n", obj_list[j].obj); + H5TOOLS_INFO("chunk information already inserted for <%s>\n", obj_list[j].obj); HDexit(EXIT_FAILURE); } /* insert the layout info */ @@ -237,7 +243,7 @@ options_add_layout(obj_list_t *obj_list, unsigned n_objs, pack_info_t *pack, pa table->nelems += added; - return 0; + return ret_value; } /*------------------------------------------------------------------------- diff --git a/tools/src/h5repack/h5repack_refs.c b/tools/src/h5repack/h5repack_refs.c index 52917fb..70204c8 100644 --- a/tools/src/h5repack/h5repack_refs.c +++ b/tools/src/h5repack/h5repack_refs.c @@ -42,16 +42,15 @@ int do_copy_refobjs(hid_t fidin, trav_table_t *travt, pack_opt_t *options) /* repack options */ { - int ret_value = 0; /*no need to LEAVE() on ERROR: H5TOOLS_ERR_INIT(int, SUCCEED) */ - hid_t grp_in = -1; /* read group ID */ - hid_t grp_out = -1; /* write group ID */ - hid_t dset_in = -1; /* read dataset ID */ - hid_t dset_out = -1; /* write dataset ID */ - hid_t type_in = -1; /* named type ID */ - hid_t dcpl_id = -1; /* dataset creation property list ID */ - hid_t space_id = -1; /* space ID */ - hid_t ftype_id = -1; /* file data type ID */ - hid_t mtype_id = -1; /* memory data type ID */ + hid_t grp_in = H5I_INVALID_HID; /* read group ID */ + hid_t grp_out = H5I_INVALID_HID; /* write group ID */ + hid_t dset_in = H5I_INVALID_HID; /* read dataset ID */ + hid_t dset_out = H5I_INVALID_HID; /* write dataset ID */ + hid_t type_in = H5I_INVALID_HID; /* named type ID */ + hid_t dcpl_id = H5I_INVALID_HID; /* dataset creation property list ID */ + hid_t space_id = H5I_INVALID_HID; /* space ID */ + hid_t ftype_id = H5I_INVALID_HID; /* file data type ID */ + hid_t mtype_id = H5I_INVALID_HID; /* memory data type ID */ size_t msize; /* memory size of memory type */ hsize_t nelmts; /* number of elements in dataset */ int rank; /* rank of dataset */ @@ -59,6 +58,7 @@ int do_copy_refobjs(hid_t fidin, unsigned int i, j; int k; named_dt_t *named_dt_head = NULL; /* Pointer to the stack of named datatypes copied */ + int ret_value = 0; /*------------------------------------------------------------------------- * browse @@ -76,18 +76,18 @@ int do_copy_refobjs(hid_t fidin, *------------------------------------------------------------------------- */ if((grp_out = H5Gopen2(fidout, travt->objs[i].name, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Gopen2 failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Gopen2 failed"); if((grp_in = H5Gopen2(fidin, travt->objs[i].name, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Gopen2 failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Gopen2 failed"); if(copy_refs_attr(grp_in, grp_out, travt, fidout) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "copy_refs_attr failed"); + H5TOOLS_GOTO_ERROR((-1), "copy_refs_attr failed"); if(H5Gclose(grp_out) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Gclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Gclose failed"); if(H5Gclose(grp_in) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Gclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Gclose failed"); /*------------------------------------------------------------------------- * check for hard links @@ -104,26 +104,26 @@ int do_copy_refobjs(hid_t fidin, */ case H5TRAV_TYPE_DATASET: if((dset_in = H5Dopen2(fidin, travt->objs[i].name, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dopen2 failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dopen2 failed"); if((space_id = H5Dget_space(dset_in)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_space failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dget_space failed"); if((ftype_id = H5Dget_type(dset_in)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_type failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dget_type failed"); if((dcpl_id = H5Dget_create_plist(dset_in)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_create_plist failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dget_create_plist failed"); if((rank = H5Sget_simple_extent_ndims(space_id)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sget_simple_extent_ndims failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Sget_simple_extent_ndims failed"); if(H5Sget_simple_extent_dims(space_id, dims, NULL) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sget_simple_extent_dims failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Sget_simple_extent_dims failed"); nelmts = 1; for(k = 0; k < rank; k++) nelmts *= dims[k]; if((mtype_id = H5Tget_native_type(ftype_id, H5T_DIR_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tget_native_type failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tget_native_type failed"); if((msize = H5Tget_size(mtype_id)) == 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tget_size failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tget_size failed"); /*------------------------------------------------------------------------- * check if the dataset creation property list has filters that @@ -145,7 +145,7 @@ int do_copy_refobjs(hid_t fidin, *------------------------------------------------------------------------- */ if(H5Tequal(mtype_id, H5T_STD_REF_OBJ)) { - hid_t refobj_id = -1; + hid_t refobj_id = H5I_INVALID_HID; hobj_ref_t *refbuf = NULL; /* buffer for object references */ hobj_ref_t *buf = NULL; const char* refname; @@ -159,15 +159,15 @@ int do_copy_refobjs(hid_t fidin, buf = (hobj_ref_t *)HDmalloc((unsigned)(nelmts * msize)); if(buf==NULL) { HDprintf("cannot read into memory\n" ); - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDmalloc failed"); + H5TOOLS_GOTO_ERROR((-1), "HDmalloc failed"); } /* end if */ if(H5Dread(dset_in, mtype_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dread failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dread failed"); refbuf = (hobj_ref_t*) HDcalloc((unsigned)nelmts, msize); if(refbuf == NULL){ HDprintf("cannot allocate memory\n" ); - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDcalloc failed"); + H5TOOLS_GOTO_ERROR((-1), "HDcalloc failed"); } /* end if */ for(u = 0; u < nelmts; u++) { H5E_BEGIN_TRY { @@ -181,7 +181,7 @@ int do_copy_refobjs(hid_t fidin, if((refname = MapIdToName(refobj_id, travt)) != NULL) { /* create the reference, -1 parameter for objects */ if(H5Rcreate(&refbuf[u], fidout, refname, H5R_OBJECT, (hid_t)-1) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Rcreate failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Rcreate failed"); if(options->verbose) { HDprintf(FORMAT_OBJ,"dset",travt->objs[i].name ); HDprintf("object <%s> object reference created to <%s>\n", @@ -190,7 +190,7 @@ int do_copy_refobjs(hid_t fidin, } } /*refname*/ if (H5Oclose(refobj_id) < 0) - H5TOOLS_INFO(H5E_tools_min_id_g, "H5Oclose refob failed"); + H5TOOLS_ERROR((-1), "H5Oclose refob failed"); } /* u */ } /*nelmts*/ @@ -199,10 +199,10 @@ int do_copy_refobjs(hid_t fidin, *------------------------------------------------------------------------- */ if((dset_out = H5Dcreate2(fidout, travt->objs[i].name, mtype_id, space_id, H5P_DEFAULT, dcpl_id, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dcreate2 failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dcreate2 failed"); if(nelmts) if(H5Dwrite(dset_out, mtype_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, refbuf) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dwrite failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dwrite failed"); if(buf) HDfree(buf); @@ -213,7 +213,7 @@ int do_copy_refobjs(hid_t fidin, * copy attrs *----------------------------------------------------*/ if(copy_attr(dset_in, dset_out, &named_dt_head, travt, options) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "copy_attr failed"); + H5TOOLS_GOTO_ERROR((-1), "copy_attr failed"); } /*H5T_STD_REF_OBJ*/ /*------------------------------------------------------------------------- @@ -221,7 +221,7 @@ int do_copy_refobjs(hid_t fidin, *------------------------------------------------------------------------- */ else if(H5Tequal(mtype_id, H5T_STD_REF_DSETREG)) { - hid_t refobj_id = -1; + hid_t refobj_id = H5I_INVALID_HID; hdset_reg_ref_t *refbuf = NULL; /* input buffer for region references */ hdset_reg_ref_t *buf = NULL; /* output buffer */ const char* refname; @@ -235,10 +235,10 @@ int do_copy_refobjs(hid_t fidin, buf = (hdset_reg_ref_t *)HDmalloc((unsigned)(nelmts * msize)); if(buf == NULL) { HDprintf("cannot read into memory\n"); - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDmalloc failed"); + H5TOOLS_GOTO_ERROR((-1), "HDmalloc failed"); } /* end if */ if(H5Dread(dset_in, mtype_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dread failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dread failed"); /*------------------------------------------------------------------------- * create output @@ -247,7 +247,7 @@ int do_copy_refobjs(hid_t fidin, refbuf = (hdset_reg_ref_t *)HDcalloc(sizeof(hdset_reg_ref_t), (size_t)nelmts); /*init to zero */ if(refbuf == NULL) { HDprintf("cannot allocate memory\n"); - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDcalloc failed"); + H5TOOLS_GOTO_ERROR((-1), "HDcalloc failed"); } /* end if */ for(u = 0; u < nelmts; u++) { @@ -260,16 +260,16 @@ int do_copy_refobjs(hid_t fidin, * in the second traversal of the file */ if((refname = MapIdToName(refobj_id, travt)) != NULL) { - hid_t region_id = -1; /* region id of the referenced dataset */ + hid_t region_id = H5I_INVALID_HID; /* region id of the referenced dataset */ if((region_id = H5Rget_region(dset_in, H5R_DATASET_REGION, &buf[u])) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Rget_region failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Rget_region failed"); /* create the reference, we need the space_id */ if(H5Rcreate(&refbuf[u], fidout, refname, H5R_DATASET_REGION, region_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Rcreate failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Rcreate failed"); if(H5Sclose(region_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Sclose failed"); if(options->verbose) { HDprintf(FORMAT_OBJ,"dset",travt->objs[i].name ); HDprintf("object <%s> region reference created to <%s>\n", @@ -278,7 +278,7 @@ int do_copy_refobjs(hid_t fidin, } } /*refname*/ if (H5Oclose(refobj_id) < 0) - H5TOOLS_INFO(H5E_tools_min_id_g, "H5Oclose refobj_id failed"); + H5TOOLS_ERROR((-1), "H5Oclose refobj_id failed"); } /* u */ } /*nelmts*/ @@ -287,10 +287,10 @@ int do_copy_refobjs(hid_t fidin, *------------------------------------------------------------------------- */ if((dset_out = H5Dcreate2(fidout, travt->objs[i].name, mtype_id, space_id, H5P_DEFAULT, dcpl_id, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dcreate2 failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dcreate2 failed"); if(nelmts) if(H5Dwrite(dset_out, mtype_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, refbuf) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dwrite failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dwrite failed"); if(buf) HDfree(buf); @@ -301,7 +301,7 @@ int do_copy_refobjs(hid_t fidin, * copy attrs *----------------------------------------------------*/ if(copy_attr(dset_in, dset_out, &named_dt_head, travt, options) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "copy_attr failed"); + H5TOOLS_GOTO_ERROR((-1), "copy_attr failed"); } /* H5T_STD_REF_DSETREG */ /*------------------------------------------------------------------------- * not references, open previously created object in 1st traversal @@ -309,7 +309,7 @@ int do_copy_refobjs(hid_t fidin, */ else { if((dset_out = H5Dopen2(fidout, travt->objs[i].name, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dopen2 failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dopen2 failed"); } /* end else */ /*------------------------------------------------------------------------- @@ -317,7 +317,7 @@ int do_copy_refobjs(hid_t fidin, *------------------------------------------------------------------------- */ if(copy_refs_attr(dset_in, dset_out, travt, fidout) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "copy_refs_attr failed"); + H5TOOLS_GOTO_ERROR((-1), "copy_refs_attr failed"); /*------------------------------------------------------------------------- * check for hard links @@ -328,7 +328,7 @@ int do_copy_refobjs(hid_t fidin, H5Lcreate_hard(fidout, travt->objs[i].name, H5L_SAME_LOC, travt->objs[i].links[j].new_name, H5P_DEFAULT, H5P_DEFAULT); if(H5Dclose(dset_out) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dclose failed"); } /*can_read*/ /*------------------------------------------------------------------------- @@ -336,15 +336,15 @@ int do_copy_refobjs(hid_t fidin, *------------------------------------------------------------------------- */ if(H5Tclose(ftype_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tclose failed"); if(H5Tclose(mtype_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tclose failed"); if(H5Pclose(dcpl_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pclose failed"); if(H5Sclose(space_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Sclose failed"); if(H5Dclose(dset_in) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dclose failed"); break; /*------------------------------------------------------------------------- @@ -353,9 +353,9 @@ int do_copy_refobjs(hid_t fidin, */ case H5TRAV_TYPE_NAMED_DATATYPE: if((type_in = H5Topen2(fidin, travt->objs[i].name, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Topen2 failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Topen2 failed"); if(H5Tclose(type_in) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tclose failed"); break; /*------------------------------------------------------------------------- @@ -368,7 +368,8 @@ int do_copy_refobjs(hid_t fidin, case H5TRAV_TYPE_UNKNOWN: case H5TRAV_TYPE_UDLINK: - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5TRAV invalid type"); + H5TOOLS_GOTO_ERROR((-1), "H5TRAV invalid type"); + break; default: break; @@ -380,7 +381,7 @@ int do_copy_refobjs(hid_t fidin, * in copy_attr(), so need to free. */ if (named_datatype_free(&named_dt_head, 0) < 0) - H5TOOLS_INFO(H5E_tools_min_id_g, "named_datatype_free failed"); + H5TOOLS_ERROR((-1), "named_datatype_free failed"); return ret_value; @@ -429,12 +430,11 @@ static int copy_refs_attr(hid_t loc_in, trav_table_t *travt, hid_t fidout) /* for saving references */ { - int ret_value = 0; /*no need to LEAVE() on ERROR: H5TOOLS_ERR_INIT(int, SUCCEED) */ - hid_t attr_id = -1; /* attr ID */ - hid_t attr_out = -1; /* attr ID */ - hid_t space_id = -1; /* space ID */ - hid_t ftype_id = -1; /* file data type ID */ - hid_t mtype_id = -1; /* memory data type ID */ + hid_t attr_id = H5I_INVALID_HID; /* attr ID */ + hid_t attr_out = H5I_INVALID_HID; /* attr ID */ + hid_t space_id = H5I_INVALID_HID; /* space ID */ + hid_t ftype_id = H5I_INVALID_HID; /* file data type ID */ + hid_t mtype_id = H5I_INVALID_HID; /* memory data type ID */ size_t msize; /* memory size of type */ hsize_t nelmts; /* number of elements in dataset */ hsize_t dims[H5S_MAX_RANK];/* dimensions of dataset */ @@ -452,29 +452,29 @@ static int copy_refs_attr(hid_t loc_in, unsigned *ref_comp_index = NULL; size_t *ref_comp_size = NULL; int ref_comp_field_n = 0; - + int ret_value = 0; if(H5Oget_info2(loc_in, &oinfo, H5O_INFO_NUM_ATTRS) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Oget_info failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Oget_info failed"); for(u = 0; u < (unsigned)oinfo.num_attrs; u++) { is_ref = is_ref_vlen = is_ref_array = is_ref_comp = 0; /* open attribute */ if((attr_id = H5Aopen_by_idx(loc_in, ".", H5_INDEX_CRT_ORDER, H5_ITER_INC, (hsize_t)u, H5P_DEFAULT, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aopen_by_idx failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Aopen_by_idx failed"); /* get the file datatype */ if((ftype_id = H5Aget_type(attr_id)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aget_type failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Aget_type failed"); type_class = H5Tget_class(ftype_id); if((mtype_id = H5Tget_native_type(ftype_id, H5T_DIR_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tget_native_type failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tget_native_type failed"); if((msize = H5Tget_size(mtype_id)) == 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tget_size failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tget_size failed"); is_ref = (type_class == H5T_REFERENCE); @@ -484,7 +484,7 @@ static int copy_refs_attr(hid_t loc_in, is_ref_vlen = (H5Tget_class(base_type) == H5T_REFERENCE); msize = H5Tget_size(base_type); if (H5Tclose(base_type) < 0) - H5TOOLS_INFO(H5E_tools_min_id_g, "H5Tclose base_type failed"); + H5TOOLS_ERROR((-1), "H5Tclose base_type failed"); } else if(type_class == H5T_ARRAY ) { hid_t base_type = H5Tget_super(ftype_id); @@ -492,13 +492,13 @@ static int copy_refs_attr(hid_t loc_in, is_ref_array = (H5Tget_class(base_type) == H5T_REFERENCE); msize = H5Tget_size(base_type); if (H5Tclose(base_type) < 0) - H5TOOLS_INFO(H5E_tools_min_id_g, "H5Tclose base_type failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tclose base_type failed"); } else if(type_class == H5T_COMPOUND) { int nmembers = H5Tget_nmembers(ftype_id) ; if (nmembers < 1) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tget_nmembers failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tget_nmembers failed"); ref_comp_index = (unsigned *)HDmalloc((size_t)nmembers*sizeof(unsigned)); ref_comp_size = (size_t *)HDmalloc((size_t)nmembers*sizeof(ref_comp_size)); @@ -513,7 +513,7 @@ static int copy_refs_attr(hid_t loc_in, ref_comp_field_n++; } if (H5Tclose(mtid) < 0) - H5TOOLS_INFO(H5E_tools_min_id_g, "H5Tclose mtid failed"); + H5TOOLS_ERROR((-1), "H5Tclose mtid failed"); } /* if compound don't contain reference type member, free the above @@ -536,25 +536,25 @@ static int copy_refs_attr(hid_t loc_in, if (!(is_ref || is_ref_vlen || is_ref_array || is_ref_comp)) { if (H5Tclose(mtype_id) < 0) - H5TOOLS_INFO(H5E_tools_min_id_g, "H5Tclose mtype_id failed"); + H5TOOLS_ERROR((-1), "H5Tclose mtype_id failed"); if (H5Tclose(ftype_id) < 0) - H5TOOLS_INFO(H5E_tools_min_id_g, "H5Tclose ftype_id failed"); + H5TOOLS_ERROR((-1), "H5Tclose ftype_id failed"); if (H5Aclose(attr_id) < 0) - H5TOOLS_INFO(H5E_tools_min_id_g, "H5Aclose attr_id failed"); + H5TOOLS_ERROR((-1), "H5Aclose attr_id failed"); continue; } /* get name */ if(H5Aget_name(attr_id, 255, name) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aget_name failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Aget_name failed"); /* get the dataspace handle */ if((space_id = H5Aget_space(attr_id)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aget_space failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Aget_space failed"); /* get dimensions */ if((rank = H5Sget_simple_extent_dims(space_id, dims, NULL)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sget_simple_extent_dims failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Sget_simple_extent_dims failed"); /*------------------------------------------------------------------------- @@ -573,7 +573,7 @@ static int copy_refs_attr(hid_t loc_in, msize = H5Tget_size(base_type); if (H5Tclose(base_type) < 0) - H5TOOLS_INFO(H5E_tools_min_id_g, "H5Tclose base_type failed"); + H5TOOLS_ERROR((-1), "H5Tclose base_type failed"); array_rank = (unsigned)H5Tget_array_ndims(mtype_id); H5Tget_array_dims2(mtype_id, array_dims); @@ -583,7 +583,7 @@ static int copy_refs_attr(hid_t loc_in, } if((attr_out = H5Acreate2(loc_out, name, ftype_id, space_id, H5P_DEFAULT, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Acreate2 failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Acreate2 failed"); if (nelmts>0) { /* handle object references */ @@ -591,15 +591,15 @@ static int copy_refs_attr(hid_t loc_in, buf = (hobj_ref_t *)HDmalloc((unsigned)(nelmts * msize)); if(buf == NULL) { HDprintf("cannot read into memory\n"); - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDmalloc failed"); + H5TOOLS_GOTO_ERROR((-1), "HDmalloc failed"); } /* end if */ if(H5Aread(attr_id, mtype_id, buf) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aread failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Aread failed"); refbuf = (hobj_ref_t *)HDcalloc((unsigned)nelmts, msize); if(refbuf == NULL) { HDprintf("cannot allocate memory\n"); - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDcalloc failed"); + H5TOOLS_GOTO_ERROR((-1), "HDcalloc failed"); } /* end if */ for(i = 0; i < (unsigned)nelmts; i++) @@ -612,10 +612,10 @@ static int copy_refs_attr(hid_t loc_in, if(buf == NULL) { HDprintf( "cannot read into memory\n" ); - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDmalloc failed"); + H5TOOLS_GOTO_ERROR((-1), "HDmalloc failed"); } /* end if */ if(H5Aread(attr_id, mtype_id, buf) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aread failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Aread failed"); /*------------------------------------------------------------------------- * create output @@ -624,7 +624,7 @@ static int copy_refs_attr(hid_t loc_in, refbuf = (hdset_reg_ref_t *)HDcalloc(sizeof(hdset_reg_ref_t), (size_t)nelmts); /*init to zero */ if(refbuf == NULL) { HDprintf( "cannot allocate memory\n" ); - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDcalloc failed"); + H5TOOLS_GOTO_ERROR((-1), "HDcalloc failed"); } /* end if */ for(i = 0; i < (unsigned)nelmts; i++) @@ -639,11 +639,11 @@ static int copy_refs_attr(hid_t loc_in, if(buf == NULL) { HDprintf( "cannot read into memory\n" ); - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDmalloc failed"); + H5TOOLS_GOTO_ERROR((-1), "HDmalloc failed"); } /* end if */ if(H5Aread(attr_id, mtype_id, buf) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aread failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Aread failed"); if (H5R_OBJ_REF_BUF_SIZE==msize) { hobj_ref_t ref_out; @@ -680,11 +680,11 @@ static int copy_refs_attr(hid_t loc_in, if(buf == NULL) { HDprintf( "cannot read into memory\n" ); - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "HDmalloc failed"); + H5TOOLS_GOTO_ERROR((-1), "HDmalloc failed"); } /* end if */ if(H5Aread(attr_id, mtype_id, buf) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aread failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Aread failed"); for (i=0; i<(unsigned)nelmts; i++) { for (j=0; j<(unsigned)ref_comp_field_n; j++) { @@ -709,7 +709,7 @@ static int copy_refs_attr(hid_t loc_in, } /* else if (is_ref_comp) */ if(H5Awrite(attr_out, mtype_id, refbuf) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Awrite failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Awrite failed"); if (is_ref_vlen && buf) H5Treclaim (mtype_id, space_id, H5P_DEFAULT, buf); @@ -739,20 +739,20 @@ static int copy_refs_attr(hid_t loc_in, } if(H5Aclose(attr_out) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Aclose failed"); /*------------------------------------------------------------------------- * close *------------------------------------------------------------------------- */ if(H5Tclose(ftype_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tclose failed"); if(H5Tclose(mtype_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tclose failed"); if(H5Sclose(space_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Sclose failed"); if(H5Aclose(attr_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Aclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Aclose failed"); } /* for(u = 0; u < (unsigned)oinfo.num_attrs; u++) */ done: @@ -822,27 +822,27 @@ out: static herr_t update_ref_value(hid_t obj_id, H5R_type_t ref_type, void *ref_in, hid_t fid_out, void *ref_out, trav_table_t *travt) { - int ret_value = 0; /*no need to LEAVE() on ERROR: H5TOOLS_ERR_INIT(int, SUCCEED) */ const char *ref_obj_name; - hid_t space_id = -1; - hid_t ref_obj_id = -1; + hid_t space_id = H5I_INVALID_HID; + hid_t ref_obj_id = H5I_INVALID_HID; + herr_t ret_value = SUCCEED; ref_obj_id = H5Rdereference2(obj_id, H5P_DEFAULT, ref_type, ref_in); if (ref_obj_id < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Rdereference2 failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Rdereference2 failed"); ref_obj_name = MapIdToName(ref_obj_id, travt); if (ref_obj_name == NULL) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "MapIdToName failed"); + H5TOOLS_GOTO_ERROR(FAIL, "MapIdToName failed"); if (ref_type == H5R_DATASET_REGION) { space_id = H5Rget_region(obj_id, H5R_DATASET_REGION, ref_in); if (space_id < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Rget_region failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Rget_region failed"); } if(H5Rcreate(ref_out, fid_out, ref_obj_name, ref_type, space_id) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Rcreate failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Rcreate failed"); done: H5E_BEGIN_TRY { diff --git a/tools/src/h5repack/h5repack_verify.c b/tools/src/h5repack/h5repack_verify.c index 30bd3f6..84cbf60 100644 --- a/tools/src/h5repack/h5repack_verify.c +++ b/tools/src/h5repack/h5repack_verify.c @@ -39,26 +39,26 @@ static int verify_filters(hid_t pid, hid_t tid, int nfilters, filter_info_t *fil int h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options) { - int ret_value = 0; /*no need to LEAVE() on ERROR: H5TOOLS_ERR_INIT(int, SUCCEED) */ - hid_t fidin = -1; /* file ID for input file*/ - hid_t fidout = -1; /* file ID for output file*/ - hid_t did = -1; /* dataset ID */ - hid_t pid = -1; /* dataset creation property list ID */ - hid_t sid = -1; /* space ID */ - hid_t tid = -1; /* type ID */ + hid_t fidin = H5I_INVALID_HID; /* file ID for input file*/ + hid_t fidout = H5I_INVALID_HID; /* file ID for output file*/ + hid_t did = H5I_INVALID_HID; /* dataset ID */ + hid_t pid = H5I_INVALID_HID; /* dataset creation property list ID */ + hid_t sid = H5I_INVALID_HID; /* space ID */ + hid_t tid = H5I_INVALID_HID; /* type ID */ int ok = 1; /* step results */ unsigned int i; trav_table_t *travt = NULL; - hid_t fcpl_in = -1; /* file creation property for input file */ - hid_t fcpl_out = -1; /* file creation property for output file */ + hid_t fcpl_in = H5I_INVALID_HID; /* file creation property for input file */ + hid_t fcpl_out = H5I_INVALID_HID; /* file creation property for output file */ H5F_fspace_strategy_t in_strategy, out_strategy; /* file space handling strategy for in/output file */ hbool_t in_persist, out_persist; /* free-space persist status for in/output file */ hsize_t in_threshold, out_threshold; /* free-space section threshold for in/output file */ hsize_t in_pagesize, out_pagesize; /* file space page size for input/output file */ + int ret_value = 0; /* open the output file */ if((fidout = H5Fopen(out_fname, H5F_ACC_RDONLY, H5P_DEFAULT)) < 0 ) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Fopen failed on <%s>", out_fname); + H5TOOLS_GOTO_ERROR((-1), "H5Fopen failed on <%s>", out_fname); for(i = 0; i < options->op_tbl->nelems; i++) { char *name = options->op_tbl->objs[i].path; @@ -69,13 +69,13 @@ h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options *------------------------------------------------------------------------- */ if((did = H5Dopen2(fidout, name, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dopen2 failed on <%s>", name); + H5TOOLS_GOTO_ERROR((-1), "H5Dopen2 failed on <%s>", name); if((sid = H5Dget_space(did)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_space failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dget_space failed"); if((pid = H5Dget_create_plist(did)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_create_plist failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dget_create_plist failed"); if((tid = H5Dget_type(did)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_type failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dget_type failed"); /*------------------------------------------------------------------------- * filter check @@ -96,13 +96,13 @@ h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options *------------------------------------------------------------------------- */ if(H5Pclose(pid) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pclose failed"); if (H5Sclose(sid) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Sclose failed"); if (H5Dclose(did) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dclose failed"); if (H5Tclose(tid) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tclose failed"); } /*------------------------------------------------------------------------- @@ -118,7 +118,7 @@ h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options /* get the list of objects in the file */ if(h5trav_gettable(fidout, travt) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "h5trav_gettable failed"); + H5TOOLS_GOTO_ERROR((-1), "h5trav_gettable failed"); for(i = 0; i < travt->nobjs; i++) { char *name = travt->objs[i].name; @@ -129,13 +129,13 @@ h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options *------------------------------------------------------------------------- */ if((did = H5Dopen2(fidout, name, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dopen2 failed on <%s>", name); + H5TOOLS_GOTO_ERROR((-1), "H5Dopen2 failed on <%s>", name); if((sid = H5Dget_space(did)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_space failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dget_space failed"); if((pid = H5Dget_create_plist(did)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_create_plist failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dget_create_plist failed"); if((tid = H5Dget_type(did)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_type failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dget_type failed"); /*------------------------------------------------------------------------- * filter check @@ -165,13 +165,13 @@ h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options *------------------------------------------------------------------------- */ if (H5Pclose(pid) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pclose failed"); if (H5Sclose(sid) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Sclose failed"); if (H5Dclose(did) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dclose failed"); if (H5Tclose(tid) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Tclose failed"); } /* if */ } /* i */ @@ -187,32 +187,32 @@ h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options /* open the input file */ if((fidin = H5Fopen(in_fname, H5F_ACC_RDONLY, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Fopen failed on file <%s>", in_fname); + H5TOOLS_GOTO_ERROR((-1), "H5Fopen failed on file <%s>", in_fname); /* Get file creation property list for input file */ if((fcpl_in = H5Fget_create_plist(fidin)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Fget_create_plist failed to retrieve file creation property list"); + H5TOOLS_GOTO_ERROR((-1), "H5Fget_create_plist failed to retrieve file creation property list"); /* Get file space info for input file */ if(H5Pget_file_space_strategy(fcpl_in, &in_strategy, &in_persist, &in_threshold) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_file_space_strategy failed to retrieve file space strategy & threshold"); + H5TOOLS_GOTO_ERROR((-1), "H5Pget_file_space_strategy failed to retrieve file space strategy & threshold"); /* Get file space page size for input file */ if(H5Pget_file_space_page_size(fcpl_in, &in_pagesize) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_file_space_page_size failed to retrieve file space page size"); + H5TOOLS_GOTO_ERROR((-1), "H5Pget_file_space_page_size failed to retrieve file space page size"); /* Output file is already opened */ /* Get file creation property list for output file */ if((fcpl_out = H5Fget_create_plist(fidout)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Fget_create_plist failed to retrieve file creation property list"); + H5TOOLS_GOTO_ERROR((-1), "H5Fget_create_plist failed to retrieve file creation property list"); /* Get file space info for output file */ if(H5Pget_file_space_strategy(fcpl_out, &out_strategy, &out_persist, &out_threshold) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_file_space_strategy failed to retrieve file space strategy & threshold"); + H5TOOLS_GOTO_ERROR((-1), "H5Pget_file_space_strategy failed to retrieve file space strategy & threshold"); /* Get file space page size for output file */ if(H5Pget_file_space_page_size(fcpl_out, &out_pagesize) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_file_space_page_size failed to retrieve file space page size"); + H5TOOLS_GOTO_ERROR((-1), "H5Pget_file_space_page_size failed to retrieve file space page size"); /* * If -S option is set, the file space handling strategy should be set as specified. @@ -221,11 +221,11 @@ h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options */ if(options->fs_strategy) { if(out_strategy != (options->fs_strategy == (H5F_fspace_strategy_t)-1 ? 0 : options->fs_strategy)) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "file space strategy not set as unexpected"); + H5TOOLS_GOTO_ERROR((-1), "file space strategy not set as unexpected"); } else { if(out_strategy != in_strategy) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "file space strategy not set as unexpected"); + H5TOOLS_GOTO_ERROR((-1), "file space strategy not set as unexpected"); } /* @@ -235,11 +235,11 @@ h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options */ if(options->fs_persist) { if(out_persist != (hbool_t)(options->fs_persist == (-1) ? FALSE : options->fs_persist)) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "free-space persist status not set as unexpected"); + H5TOOLS_GOTO_ERROR((-1), "free-space persist status not set as unexpected"); } else { if(out_persist != in_persist) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "free-space persist status not set as unexpected"); + H5TOOLS_GOTO_ERROR((-1), "free-space persist status not set as unexpected"); } /* @@ -249,11 +249,11 @@ h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options */ if(options->fs_threshold) { if(out_threshold != (hsize_t)(options->fs_threshold == (-1) ? 0 : options->fs_threshold)) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "threshold not set as unexpected"); + H5TOOLS_GOTO_ERROR((-1), "threshold not set as unexpected"); } else { if(out_threshold != in_threshold) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "threshold not set as unexpected"); + H5TOOLS_GOTO_ERROR((-1), "threshold not set as unexpected"); } /* @@ -263,11 +263,11 @@ h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options */ if(options->fs_pagesize) { if(out_pagesize != (hsize_t)(options->fs_pagesize == (-1) ? 0 : options->fs_pagesize)) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "file space page size not set as unexpected"); + H5TOOLS_GOTO_ERROR((-1), "file space page size not set as unexpected"); } else { /* "-G" is not set */ if(out_pagesize != in_pagesize) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "file space page size not set as unexpected"); + H5TOOLS_GOTO_ERROR((-1), "file space page size not set as unexpected"); } @@ -355,19 +355,19 @@ int verify_layout(hid_t pid, pack_info_t *obj) int h5repack_cmp_pl(const char *fname1, const char *fname2) { - int ret_value = 1; /*no need to LEAVE() on ERROR: H5TOOLS_ERR_INIT(int, SUCCEED) */ - hid_t fid1 =-1; /* file ID */ - hid_t fid2 =-1; /* file ID */ - hid_t dset1 =-1; /* dataset ID */ - hid_t dset2 =-1; /* dataset ID */ - hid_t gid =-1; /* group ID */ - hid_t dcpl1 =-1; /* dataset creation property list ID */ - hid_t dcpl2 =-1; /* dataset creation property list ID */ - hid_t gcplid =-1; /* group creation property list */ + hid_t fid1 =H5I_INVALID_HID; /* file ID */ + hid_t fid2 =H5I_INVALID_HID; /* file ID */ + hid_t dset1 =H5I_INVALID_HID; /* dataset ID */ + hid_t dset2 =H5I_INVALID_HID; /* dataset ID */ + hid_t gid =H5I_INVALID_HID; /* group ID */ + hid_t dcpl1 =H5I_INVALID_HID; /* dataset creation property list ID */ + hid_t dcpl2 =H5I_INVALID_HID; /* dataset creation property list ID */ + hid_t gcplid =H5I_INVALID_HID; /* group creation property list */ unsigned crt_order_flag1; /* group creation order flag */ unsigned crt_order_flag2; /* group creation order flag */ - trav_table_t *trav = NULL; + trav_table_t *trav = NULL; unsigned int i; + int ret_value = 1; /*------------------------------------------------------------------------- * open the files @@ -375,9 +375,9 @@ int h5repack_cmp_pl(const char *fname1, const char *fname2) */ /* Open the files */ if ((fid1 = H5Fopen(fname1, H5F_ACC_RDONLY, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "h5tools_fopen failed <%s>: %s", fname1, H5FOPENERROR); + H5TOOLS_GOTO_ERROR((-1), "h5tools_fopen failed <%s>: %s", fname1, H5FOPENERROR); if ((fid2 = H5Fopen(fname2, H5F_ACC_RDONLY, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "h5tools_fopen failed <%s>: %s", fname2, H5FOPENERROR); + H5TOOLS_GOTO_ERROR((-1), "h5tools_fopen failed <%s>: %s", fname2, H5FOPENERROR); /*------------------------------------------------------------------------- * get file table list of objects @@ -388,7 +388,7 @@ int h5repack_cmp_pl(const char *fname1, const char *fname2) /* init table */ trav_table_init(&trav); if(h5trav_gettable(fid1, trav) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "h5trav_gettable failed"); + H5TOOLS_GOTO_ERROR((-1), "h5trav_gettable failed"); /*------------------------------------------------------------------------- * traverse the suppplied object list @@ -397,62 +397,62 @@ int h5repack_cmp_pl(const char *fname1, const char *fname2) for(i = 0; i < trav->nobjs; i++) { if(trav->objs[i].type == H5TRAV_TYPE_GROUP) { if ((gid = H5Gopen2(fid1, trav->objs[i].name, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Gopen2 failed on first <%s>", trav->objs[i].name); + H5TOOLS_GOTO_ERROR((-1), "H5Gopen2 failed on first <%s>", trav->objs[i].name); if ((gcplid = H5Gget_create_plist(gid)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Gget_create_plist failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Gget_create_plist failed"); if (H5Pget_link_creation_order(gcplid, &crt_order_flag1) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_link_creation_order failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pget_link_creation_order failed"); if (H5Pclose(gcplid) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pclose failed"); if (H5Gclose(gid) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Gclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Gclose failed"); if ((gid = H5Gopen2(fid2, trav->objs[i].name, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Gopen2 failed on second <%s>", trav->objs[i].name); + H5TOOLS_GOTO_ERROR((-1), "H5Gopen2 failed on second <%s>", trav->objs[i].name); if ((gcplid = H5Gget_create_plist(gid)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Gget_create_plist failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Gget_create_plist failed"); if (H5Pget_link_creation_order(gcplid, &crt_order_flag2) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_link_creation_order failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pget_link_creation_order failed"); if (H5Pclose(gcplid) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pclose failed"); if (H5Gclose(gid) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Gclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Gclose failed"); if (crt_order_flag1 != crt_order_flag2) - H5TOOLS_GOTO_ERROR(0, H5E_tools_min_id_g, "property lists failed for <%s> are different", trav->objs[i].name); + H5TOOLS_GOTO_ERROR(0, "property lists failed for <%s> are different", trav->objs[i].name); } else if(trav->objs[i].type == H5TRAV_TYPE_DATASET) { if((dset1 = H5Dopen2(fid1, trav->objs[i].name, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dopen2 failed on first <%s>", trav->objs[i].name); + H5TOOLS_GOTO_ERROR((-1), "H5Dopen2 failed on first <%s>", trav->objs[i].name); if((dset2 = H5Dopen2(fid2, trav->objs[i].name, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dopen2 failed on second <%s>", trav->objs[i].name); + H5TOOLS_GOTO_ERROR((-1), "H5Dopen2 failed on second <%s>", trav->objs[i].name); if((dcpl1 = H5Dget_create_plist(dset1)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_create_plist failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dget_create_plist failed"); if((dcpl2 = H5Dget_create_plist(dset2)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_create_plist failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dget_create_plist failed"); /*------------------------------------------------------------------------- * compare the property lists *------------------------------------------------------------------------- */ if((ret_value = H5Pequal(dcpl1, dcpl2)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pequal failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pequal failed"); if(ret_value == 0) - H5TOOLS_GOTO_ERROR(0, H5E_tools_min_id_g, "property lists failed for <%s> are different", trav->objs[i].name); + H5TOOLS_GOTO_ERROR(0, "property lists failed for <%s> are different", trav->objs[i].name); /*------------------------------------------------------------------------- * close *------------------------------------------------------------------------- */ if(H5Pclose(dcpl1) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pclose failed"); if(H5Pclose(dcpl2) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Pclose failed"); if(H5Dclose(dset1) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dclose failed"); if(H5Dclose(dset2) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dclose failed"); + H5TOOLS_GOTO_ERROR((-1), "H5Dclose failed"); } /*if*/ } /*for*/ diff --git a/tools/src/h5stat/h5stat.c b/tools/src/h5stat/h5stat.c index dd1a9ce..f160671 100644 --- a/tools/src/h5stat/h5stat.c +++ b/tools/src/h5stat/h5stat.c @@ -444,7 +444,7 @@ group_stats(iter_t *iter, const char *name, const H5O_info_t *oi) { H5G_info_t ginfo; /* Group information */ unsigned bin; /* "bin" the number of objects falls in */ - herr_t ret_value = SUCCEED; /* Return value */ + herr_t ret_value = SUCCEED; /* Gather statistics about this type of object */ iter->uniq_groups++; @@ -455,7 +455,7 @@ group_stats(iter_t *iter, const char *name, const H5O_info_t *oi) /* Get group information */ if((ret_value = H5Gget_info_by_name(iter->fid, name, &ginfo, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Gget_info_by_name() failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Gget_info_by_name() failed"); /* Update link stats */ /* Collect statistics for small groups */ @@ -470,7 +470,7 @@ group_stats(iter_t *iter, const char *name, const H5O_info_t *oi) if((bin + 1) > iter->group_nbins) { /* Allocate more storage for info about dataset's datatype */ if((iter->group_bins = (unsigned long *)HDrealloc(iter->group_bins, (bin + 1) * sizeof(unsigned long))) == NULL) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Drealloc() failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Drealloc() failed"); /* Initialize counts for intermediate bins */ while(iter->group_nbins < bin) @@ -489,7 +489,7 @@ group_stats(iter_t *iter, const char *name, const H5O_info_t *oi) /* Update attribute metadata info */ if((ret_value = attribute_stats(iter, oi)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "attribute_stats failed"); + H5TOOLS_GOTO_ERROR(FAIL, "attribute_stats failed"); done: return ret_value; @@ -527,7 +527,7 @@ dataset_stats(iter_t *iter, const char *name, const H5O_info_t *oi) int num_ext; /* Number of external files for a dataset */ int nfltr; /* Number of filters for a dataset */ H5Z_filter_t fltr; /* Filter identifier */ - herr_t ret_value = SUCCEED; /* Return value */ + herr_t ret_value = SUCCEED; /* Gather statistics about this type of object */ iter->uniq_dsets++; @@ -537,7 +537,7 @@ dataset_stats(iter_t *iter, const char *name, const H5O_info_t *oi) iter->dset_ohdr_info.free_size += oi->hdr.space.free; if((did = H5Dopen2(iter->fid, name, H5P_DEFAULT)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dopen() failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Dopen() failed"); /* Update dataset metadata info */ iter->datasets_index_storage_size += oi->meta_size.obj.index_size; @@ -545,7 +545,7 @@ dataset_stats(iter_t *iter, const char *name, const H5O_info_t *oi) /* Update attribute metadata info */ if((ret_value = attribute_stats(iter, oi)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "attribute_stats() failed"); + H5TOOLS_GOTO_ERROR(FAIL, "attribute_stats() failed"); /* Get storage info */ /* Failure 0 indistinguishable from no-data-stored 0 */ @@ -553,10 +553,10 @@ dataset_stats(iter_t *iter, const char *name, const H5O_info_t *oi) /* Gather layout statistics */ if((dcpl = H5Dget_create_plist(did)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_create_plist() failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Dget_create_plist() failed"); if((lout = H5Pget_layout(dcpl)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_layout() failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Pget_layout() failed"); /* Object header's total size for H5D_COMPACT layout includes raw data size */ /* "storage" also includes H5D_COMPACT raw data size */ @@ -568,7 +568,7 @@ dataset_stats(iter_t *iter, const char *name, const H5O_info_t *oi) /* Get the number of external files for the dataset */ if((num_ext = H5Pget_external_count(dcpl)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pget_external_count() failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Pget_external_count() failed"); /* Accumulate raw data size accordingly */ if(num_ext) { @@ -580,10 +580,10 @@ dataset_stats(iter_t *iter, const char *name, const H5O_info_t *oi) /* Gather dataspace statistics */ if((sid = H5Dget_space(did)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sget_space() failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Sget_space() failed"); if((ndims = H5Sget_simple_extent_dims(sid, dims, NULL)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sget_simple_extent_dims() failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Sget_simple_extent_dims() failed"); /* Check for larger rank of dataset */ if((unsigned)ndims > iter->max_dset_rank) @@ -606,7 +606,7 @@ dataset_stats(iter_t *iter, const char *name, const H5O_info_t *oi) if((bin + 1) > iter->dset_dim_nbins) { /* Allocate more storage for info about dataset's datatype */ if((iter->dset_dim_bins = (unsigned long *)HDrealloc(iter->dset_dim_bins, (bin + 1) * sizeof(unsigned long))) == NULL) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Drealloc() failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Drealloc() failed"); /* Initialize counts for intermediate bins */ while(iter->dset_dim_nbins < bin) @@ -621,11 +621,11 @@ dataset_stats(iter_t *iter, const char *name, const H5O_info_t *oi) } /* end if */ if(H5Sclose(sid) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Sclose() failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Sclose() failed"); /* Gather datatype statistics */ if((tid = H5Dget_type(did)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dget_type() failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Dget_type() failed"); type_found = FALSE; for(u = 0; u < iter->dset_ntypes; u++) @@ -644,11 +644,11 @@ dataset_stats(iter_t *iter, const char *name, const H5O_info_t *oi) /* Allocate more storage for info about dataset's datatype */ if((iter->dset_type_info = (dtype_info_t *)HDrealloc(iter->dset_type_info, iter->dset_ntypes * sizeof(dtype_info_t))) == NULL) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Drealloc() failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Drealloc() failed"); /* Initialize information about datatype */ if((iter->dset_type_info[curr_ntype].tid = H5Tcopy(tid)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tcopy() failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Tcopy() failed"); iter->dset_type_info[curr_ntype].count = 1; iter->dset_type_info[curr_ntype].named = 0; @@ -661,7 +661,7 @@ dataset_stats(iter_t *iter, const char *name, const H5O_info_t *oi) (iter->dset_type_info[u].named)++; if(H5Tclose(tid) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tclose() failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Tclose() failed"); /* Track different filters */ if((nfltr = H5Pget_nfilters(dcpl)) >= 0) { @@ -679,10 +679,10 @@ dataset_stats(iter_t *iter, const char *name, const H5O_info_t *oi) } /* endif nfltr */ if(H5Pclose(dcpl) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pclose() failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Pclose() failed"); if(H5Dclose(did) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Dclose() failed"); + H5TOOLS_GOTO_ERROR(FAIL, "H5Dclose() failed"); done: return ret_value; @@ -715,7 +715,7 @@ datatype_stats(iter_t *iter, const H5O_info_t *oi) /* Update attribute metadata info */ if((ret_value = attribute_stats(iter, oi)) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "attribute_stats() failed"); + H5TOOLS_GOTO_ERROR(FAIL, "attribute_stats() failed"); done: return ret_value; } /* end datatype_stats() */ @@ -750,17 +750,17 @@ obj_stats(const char *path, const H5O_info_t *oi, const char *already_visited, switch(oi->type) { case H5O_TYPE_GROUP: if(group_stats(iter, path, oi) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "group_stats failed"); + H5TOOLS_GOTO_ERROR(FAIL, "group_stats failed"); break; case H5O_TYPE_DATASET: if(dataset_stats(iter, path, oi) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "dataset_stats failed"); + H5TOOLS_GOTO_ERROR(FAIL, "dataset_stats failed"); break; case H5O_TYPE_NAMED_DATATYPE: if(datatype_stats(iter, oi) < 0) - H5TOOLS_GOTO_ERROR(FAIL, H5E_tools_min_id_g, "datatype_stats failed"); + H5TOOLS_GOTO_ERROR(FAIL, "datatype_stats failed"); break; case H5O_TYPE_MAP: @@ -1853,7 +1853,7 @@ main(int argc, const char *argv[]) { iter_t iter; const char *fname = NULL; - hid_t fid = -1; + hid_t fid = H5I_INVALID_HID; H5E_auto2_t func; H5E_auto2_t tools_func; void *edata; diff --git a/tools/src/misc/h5clear.c b/tools/src/misc/h5clear.c index ae57031..927167b 100644 --- a/tools/src/misc/h5clear.c +++ b/tools/src/misc/h5clear.c @@ -252,8 +252,8 @@ int main (int argc, const char *argv[]) { char *fname = NULL; /* File name */ - hid_t fapl = -1; /* File access property list */ - hid_t fid = -1; /* File ID */ + hid_t fapl = H5I_INVALID_HID; /* File access property list */ + hid_t fid = H5I_INVALID_HID; /* File ID */ haddr_t image_addr; hsize_t image_len; unsigned flags = H5F_ACC_RDWR; /* file access flags */ diff --git a/tools/test/h5copy/h5copygentest.c b/tools/test/h5copy/h5copygentest.c index a3acdae..716b0d2 100644 --- a/tools/test/h5copy/h5copygentest.c +++ b/tools/test/h5copy/h5copygentest.c @@ -338,14 +338,14 @@ static void gent_att_compound_vlstr(hid_t loc_id) const char *v; } s1; hsize_t dim[1] = {1}; /* Dimension size */ - hid_t sid = -1; /* Dataspace ID */ - hid_t tid = -1; /* Datatype ID */ - hid_t aid = -1; /* Attribute ID */ - hid_t did = -1; /* Dataset ID */ - hid_t gid = -1; /* Group ID */ - hid_t vl_str_tid = -1; /* Variable length datatype ID */ - hid_t cmpd_tid = -1; /* Compound datatype ID */ - hid_t null_sid = -1; /* Null dataspace ID */ + hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ + hid_t tid = H5I_INVALID_HID; /* Datatype ID */ + hid_t aid = H5I_INVALID_HID; /* Attribute ID */ + hid_t did = H5I_INVALID_HID; /* Dataset ID */ + hid_t gid = H5I_INVALID_HID; /* Group ID */ + hid_t vl_str_tid = H5I_INVALID_HID; /* Variable length datatype ID */ + hid_t cmpd_tid = H5I_INVALID_HID; /* Compound datatype ID */ + hid_t null_sid = H5I_INVALID_HID; /* Null dataspace ID */ s1 buf; /* Buffer */ buf.i = 9; @@ -725,7 +725,7 @@ out: *------------------------------------------------------------------------*/ static void Test_Obj_Copy(void) { - hid_t fid = -1; /* File id */ + hid_t fid = H5I_INVALID_HID; /* File id */ hid_t fapl_new = (-1); /* File access property id */ unsigned new_format; /* New format or old format */ diff --git a/tools/test/h5diff/CMakeTests.cmake b/tools/test/h5diff/CMakeTests.cmake index 57bcd12..347f796 100644 --- a/tools/test/h5diff/CMakeTests.cmake +++ b/tools/test/h5diff/CMakeTests.cmake @@ -94,6 +94,17 @@ ${HDF5_TOOLS_DIR}/testfiles/vds/5_vds.h5 # tools/testfiles ${HDF5_TOOLS_DIR}/testfiles/tvlstr.h5 + #STD_REF_OBJ files + ${HDF5_TOOLS_DIR}/testfiles/trefer_attr.h5 + ${HDF5_TOOLS_DIR}/testfiles/trefer_compat.h5 + ${HDF5_TOOLS_DIR}/testfiles/trefer_ext1.h5 + ${HDF5_TOOLS_DIR}/testfiles/trefer_ext2.h5 + ${HDF5_TOOLS_DIR}/testfiles/trefer_grp.h5 + ${HDF5_TOOLS_DIR}/testfiles/trefer_obj_del.h5 + ${HDF5_TOOLS_DIR}/testfiles/trefer_obj.h5 + ${HDF5_TOOLS_DIR}/testfiles/trefer_param.h5 + ${HDF5_TOOLS_DIR}/testfiles/trefer_reg_1d.h5 + ${HDF5_TOOLS_DIR}/testfiles/trefer_reg.h5 ) set (LIST_OTHER_TEST_FILES @@ -201,6 +212,7 @@ ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_56.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_57.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_58.txt + ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_58_ref.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_59.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_500.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_501.txt @@ -282,6 +294,7 @@ ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_90.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_8625.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_8639.txt + ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_reg.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_ud.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_udfail.err ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_udfail.txt @@ -1044,7 +1057,10 @@ ADD_H5_TEST (h5diff_56 1 -v ${FILE4} ${FILE4} dset6a dset6b) ADD_H5_TEST (h5diff_57 0 -v ${FILE4} ${FILE4} dset7a dset7b) # 5.8 (region reference) -ADD_H5_TEST (h5diff_58 1 -v ${FILE7} ${FILE8} refreg) +ADD_H5_TEST (h5diff_58 1 -v2 ${FILE7} ${FILE8} refreg) +ADD_H5_TEST (h5diff_58_ref 1 -v2 ${FILE7} ${FILE8} /g1/reference2D) +# STD_REF_OBJ +ADD_H5_TEST (h5diff_reg 0 -v2 trefer_attr.h5 trefer_ext2.h5 Dataset3 Dataset3) # test for both dset and attr with same type but with different size # ( HDDFV-7942 ) @@ -1484,8 +1500,6 @@ ADD_H5_TEST (h5diff_485 0 -v --exclude-path "/group1" h5diff_exclude3-1.h5 h5dif ADD_H5_TEST (h5diff_486 0 -v --exclude-path "/group1" h5diff_exclude3-2.h5 h5diff_exclude3-1.h5) ADD_H5_TEST (h5diff_487 1 -v --exclude-path "/group1/dset" h5diff_exclude3-1.h5 h5diff_exclude3-2.h5) - - # ############################################################################## # # diff various multiple vlen and fixed strings in a compound type dataset # ############################################################################## @@ -1524,7 +1538,7 @@ ADD_H5_TEST (h5diff_800 1 -v ${FILE7} ${FILE8} /g1/array /g1/array) ADD_H5_TEST (h5diff_801 1 -v ${FILE7} ${FILE8A} /g1/array /g1/array) # ############################################################################## -# VDS tests +# # VDS tests # ############################################################################## ADD_H5_TEST (h5diff_v1 0 -v ${FILEV1} ${FILEV2}) ADD_H5_TEST (h5diff_v2 0 -r ${FILEV1} ${FILEV2}) diff --git a/tools/test/h5diff/h5diffgentest.c b/tools/test/h5diff/h5diffgentest.c index c711013..05bad77 100644 --- a/tools/test/h5diff/h5diffgentest.c +++ b/tools/test/h5diff/h5diffgentest.c @@ -303,8 +303,8 @@ int main(void) static int test_basic(const char *fname1, const char *fname2, const char *fname3) { - hid_t fid1 = -1, fid2 = -1; - hid_t gid1 = -1, gid2 = -1, gid3 = -1; + hid_t fid1 = H5I_INVALID_HID, fid2 = H5I_INVALID_HID; + hid_t gid1 = H5I_INVALID_HID, gid2 = H5I_INVALID_HID, gid3 = H5I_INVALID_HID; hsize_t dims1[1] = { 6 }; hsize_t dims2[2] = { 3, 2 }; @@ -662,11 +662,11 @@ out: static int test_types(const char *fname) { - hid_t fid1 = -1; - hid_t gid1 = -1; - hid_t gid2 = -1; - hid_t tid1 = -1; - hid_t tid2 = -1; + hid_t fid1 = H5I_INVALID_HID; + hid_t gid1 = H5I_INVALID_HID; + hid_t gid2 = H5I_INVALID_HID; + hid_t tid1 = H5I_INVALID_HID; + hid_t tid2 = H5I_INVALID_HID; herr_t status; hsize_t dims[1] = { 1 }; typedef struct s1_t { @@ -787,8 +787,8 @@ int test_types(const char *fname) static int test_datatypes(const char *fname) { - hid_t fid1 = -1; - hid_t dset = -1; + hid_t fid1 = H5I_INVALID_HID; + hid_t dset = H5I_INVALID_HID; hsize_t dims[2] = { 3, 2 }; herr_t status; char buf1a[3][2] = { { 1, 1 }, { 1, 1 }, { 1, 1 } }; @@ -977,11 +977,11 @@ int test_datatypes(const char *fname) static int test_attributes(const char *file, int make_diffs /* flag to modify data buffers */) { - hid_t fid = -1; - hid_t did = -1; - hid_t gid = -1; - hid_t root_id = -1; - hid_t sid = -1; + hid_t fid = H5I_INVALID_HID; + hid_t did = H5I_INVALID_HID; + hid_t gid = H5I_INVALID_HID; + hid_t root_id = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; hsize_t dims[1] = { 2 }; herr_t status; @@ -1039,14 +1039,14 @@ int test_attributes(const char *file, int make_diffs /* flag to modify data buff static int test_attributes_verbose_level(const char *fname1, const char *fname2) { herr_t status = SUCCEED; - hid_t fid1 = -1, fid2 = -1; - hid_t f1_gid = -1, f2_gid = -1; - hid_t f1_gid2 = -1, f2_gid2 = -1; - hid_t f1_gid3 = -1, f2_gid3 = -1; - hid_t f1_gid4 = -1, f2_gid4 = -1; - hid_t f1_did = -1, f2_did = -1; - hid_t f1_sid = -1, f2_sid = -1; - hid_t f1_tid = -1, f2_tid = -1; + hid_t fid1 = H5I_INVALID_HID, fid2 = H5I_INVALID_HID; + hid_t f1_gid = H5I_INVALID_HID, f2_gid = H5I_INVALID_HID; + hid_t f1_gid2 = H5I_INVALID_HID, f2_gid2 = H5I_INVALID_HID; + hid_t f1_gid3 = H5I_INVALID_HID, f2_gid3 = H5I_INVALID_HID; + hid_t f1_gid4 = H5I_INVALID_HID, f2_gid4 = H5I_INVALID_HID; + hid_t f1_did = H5I_INVALID_HID, f2_did = H5I_INVALID_HID; + hid_t f1_sid = H5I_INVALID_HID, f2_sid = H5I_INVALID_HID; + hid_t f1_tid = H5I_INVALID_HID, f2_tid = H5I_INVALID_HID; /* dset */ hsize_t dset_dims[1] = { 3 }; int dset_data[3] = { 0, 1, 2 }; @@ -1304,10 +1304,10 @@ out: static int test_datasets(const char *file, int make_diffs /* flag to modify data buffers */) { - hid_t fid = -1; - hid_t did = -1; - hid_t gid = -1; - hid_t sid = -1; + hid_t fid = H5I_INVALID_HID; + hid_t did = H5I_INVALID_HID; + hid_t gid = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; hsize_t dims[1] = { 2 }; herr_t status; int buf[2] = { 1, 2 }; @@ -1357,10 +1357,10 @@ int test_datasets(const char *file, int make_diffs /* flag to modify data buffer static int test_special_datasets(const char *file, int make_diffs /* flag to modify data buffers */) { - hid_t fid = -1; - hid_t did = -1; - hid_t sid0 = -1; - hid_t sid = -1; + hid_t fid = H5I_INVALID_HID; + hid_t did = H5I_INVALID_HID; + hid_t sid0 = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; hsize_t dims0[SPACE1_RANK] = { SPACE1_DIM1, SPACE1_DIM2 }; hsize_t dims[SPACE1_RANK] = { SPACE1_DIM1, SPACE1_DIM2 }; herr_t status; @@ -1413,9 +1413,9 @@ int test_special_datasets(const char *file, int make_diffs /* flag to modify dat *-------------------------------------------------------------------------*/ static int test_link_name(const char *fname1) { - hid_t fid1 = -1; - hid_t gid1 = -1; - hid_t gid2 = -1; + hid_t fid1 = H5I_INVALID_HID; + hid_t gid1 = H5I_INVALID_HID; + hid_t gid2 = H5I_INVALID_HID; herr_t status = SUCCEED; /*----------------------------------------------------------------------- @@ -1486,8 +1486,8 @@ out: *-------------------------------------------------------------------------*/ static int test_soft_links(const char *fname1) { - hid_t fid1 = -1; - hid_t gid1 = -1; + hid_t fid1 = H5I_INVALID_HID; + hid_t gid1 = H5I_INVALID_HID; hsize_t dims2[2] = { 2, 4 }; int data1[4][2] = { { 0, 1 }, { 2, 3 }, { 1, 2 }, { 3, 4 } }; int data2[4][2] = { { 0, 0 }, { 0, 0 }, { 0, 0 }, { 0, 0 } }; @@ -1605,10 +1605,10 @@ out: *-------------------------------------------------------------------------*/ static int test_linked_softlinks(const char *fname1) { - hid_t fid1 = -1; - hid_t gid1 = -1; - hid_t gid2 = -1; - hid_t gid3 = -1; + hid_t fid1 = H5I_INVALID_HID; + hid_t gid1 = H5I_INVALID_HID; + hid_t gid2 = H5I_INVALID_HID; + hid_t gid3 = H5I_INVALID_HID; hsize_t dims2[2] = { 2, 4 }; int data1[4][2] = { { 0, 1 }, { 2, 3 }, { 1, 2 }, { 3, 4 } }; int data2[4][2] = { { 0, 0 }, { 0, 0 }, { 0, 0 }, { 0, 0 } }; @@ -1786,10 +1786,10 @@ out: *-------------------------------------------------------------------------*/ static int test_external_links(const char *fname1, const char *fname2) { - hid_t fid1 = -1; - hid_t fid2 = -1; - hid_t gid1 = -1; - hid_t gid2 = -1; + hid_t fid1 = H5I_INVALID_HID; + hid_t fid2 = H5I_INVALID_HID; + hid_t gid1 = H5I_INVALID_HID; + hid_t gid2 = H5I_INVALID_HID; hsize_t dims2[2] = { 2, 4 }; int data1[4][2] = { { 0, 1 }, { 2, 3 }, { 1, 2 }, { 3, 4 } }; int data2[4][2] = { { 0, 0 }, { 0, 0 }, { 0, 0 }, { 0, 0 } }; @@ -1931,9 +1931,9 @@ out: *-------------------------------------------------------------------------*/ static int test_ext2soft_links(const char *fname1, const char *fname2) { - hid_t fid1 = -1; - hid_t fid2 = -1; - hid_t gid2 = -1; + hid_t fid1 = H5I_INVALID_HID; + hid_t fid2 = H5I_INVALID_HID; + hid_t gid2 = H5I_INVALID_HID; hsize_t dims2[2] = { 2, 4 }; int data1[4][2] = { { 0, 1 }, { 2, 3 }, { 1, 2 }, { 3, 4 } }; int data2[4][2] = { { 0, 0 }, { 0, 0 }, { 0, 0 }, { 0, 0 } }; @@ -2060,12 +2060,12 @@ out: static int gen_dataset_idx(const char *file, int format) { - hid_t fid = -1; /* file id */ - hid_t did = -1; - hid_t did2 = -1; /* dataset id */ - hid_t sid = -1; /* space id */ - hid_t fapl = -1; /* file access property id */ - hid_t dcpl = -1; /* dataset creation property id */ + hid_t fid = H5I_INVALID_HID; /* file id */ + hid_t did = H5I_INVALID_HID; + hid_t did2 = H5I_INVALID_HID; /* dataset id */ + hid_t sid = H5I_INVALID_HID; /* space id */ + hid_t fapl = H5I_INVALID_HID; /* file access property id */ + hid_t dcpl = H5I_INVALID_HID; /* dataset creation property id */ hsize_t dims[1] = { 10 }; /* dataset dimension */ hsize_t c_dims[1] = { 2 }; /* chunk dimension */ herr_t status; /* return status */ @@ -2146,8 +2146,8 @@ int gen_dataset_idx(const char *file, int format) *-------------------------------------------------------------------------*/ static int test_dangle_links(const char *fname1, const char *fname2) { - hid_t fid1 = -1; - hid_t fid2 = -1; + hid_t fid1 = H5I_INVALID_HID; + hid_t fid2 = H5I_INVALID_HID; hsize_t dims2[2] = { 2, 4 }; int data1[4][2] = { { 0, 1 }, { 2, 3 }, { 1, 2 }, { 3, 4 } }; int data2[4][2] = { { 0, 0 }, { 0, 0 }, { 0, 0 }, { 0, 0 } }; @@ -2346,10 +2346,10 @@ out: *-------------------------------------------------------------------------*/ static int test_group_recurse(const char *fname1, const char *fname2) { - hid_t fid1 = -1; - hid_t fid2 = -1; - hid_t gid1_f1 = -1, gid2_f1 = -1, gid3_f1 = -1, gid10_f1 = -1; - hid_t gid1_f2 = -1, gid2_f2 = -1, gid3_f2 = -1, gid11_f2 = -1; + hid_t fid1 = H5I_INVALID_HID; + hid_t fid2 = H5I_INVALID_HID; + hid_t gid1_f1 = H5I_INVALID_HID, gid2_f1 = H5I_INVALID_HID, gid3_f1 = H5I_INVALID_HID, gid10_f1 = H5I_INVALID_HID; + hid_t gid1_f2 = H5I_INVALID_HID, gid2_f2 = H5I_INVALID_HID, gid3_f2 = H5I_INVALID_HID, gid11_f2 = H5I_INVALID_HID; hsize_t dims2[2] = { 2, 4 }; int data1[4][2] = { { 0, 1 }, { 0, 1 }, { 1, 0 }, { 1, 0 } }; int data2[4][2] = { { 0, 2 }, { 0, 2 }, { 2, 0 }, { 2, 0 } }; @@ -2758,18 +2758,18 @@ out: #define GRP_R_DSETNAME2 "dset2" static int test_group_recurse2(void) { - hid_t fileid1 = -1; - hid_t grp1 = -1; - hid_t grp2 = -1; - hid_t grp3 = -1; - hid_t grp4 = -1; - hid_t dset1 = -1; - hid_t dset2 = -1; - hid_t datatype = -1; - hid_t dataspace = -1; - hid_t fileid2 = -1; - hid_t fileid3 = -1; - hid_t fileid4 = -1; + hid_t fileid1 = H5I_INVALID_HID; + hid_t grp1 = H5I_INVALID_HID; + hid_t grp2 = H5I_INVALID_HID; + hid_t grp3 = H5I_INVALID_HID; + hid_t grp4 = H5I_INVALID_HID; + hid_t dset1 = H5I_INVALID_HID; + hid_t dset2 = H5I_INVALID_HID; + hid_t datatype = H5I_INVALID_HID; + hid_t dataspace = H5I_INVALID_HID; + hid_t fileid2 = H5I_INVALID_HID; + hid_t fileid3 = H5I_INVALID_HID; + hid_t fileid4 = H5I_INVALID_HID; hsize_t dimsf[2]; /* dataset dimensions */ herr_t status = 0; int data1[4][2] = { { 0, 0 }, { 1, 1 }, { 2, 2 }, { 3, 3 } }; @@ -3069,10 +3069,10 @@ out: *-------------------------------------------------------------------------*/ static int test_exclude_obj1(const char *fname1, const char *fname2) { - hid_t fid1 = -1; - hid_t fid2 = -1; - hid_t gid1 = -1; - hid_t gid2 = -1; + hid_t fid1 = H5I_INVALID_HID; + hid_t fid2 = H5I_INVALID_HID; + hid_t gid1 = H5I_INVALID_HID; + hid_t gid2 = H5I_INVALID_HID; hsize_t dims2[2] = { 2, 4 }; int data1[4][2] = { { 0, 0 }, { 0, 0 }, { 0, 0 }, { 0, 0 } }; int data2[4][2] = { { 0, 1 }, { 2, 3 }, { 1, 2 }, { 3, 4 } }; @@ -3189,11 +3189,11 @@ out: *-------------------------------------------------------------------------*/ static int test_exclude_obj2(const char *fname1, const char *fname2) { - hid_t fid1 = -1; - hid_t fid2 = -1; - hid_t gid1 = -1; - hid_t gid2 = -1; - hid_t gid3 = -1; + hid_t fid1 = H5I_INVALID_HID; + hid_t fid2 = H5I_INVALID_HID; + hid_t gid1 = H5I_INVALID_HID; + hid_t gid2 = H5I_INVALID_HID; + hid_t gid3 = H5I_INVALID_HID; hsize_t dims2[2] = { 2, 4 }; int data1[4][2] = { { 0, 0 }, { 0, 0 }, { 0, 0 }, { 0, 0 } }; int data2[4][2] = { { 0, 1 }, { 2, 3 }, { 1, 2 }, { 3, 4 } }; @@ -3320,9 +3320,9 @@ out: *-------------------------------------------------------------------------*/ static int test_exclude_obj3(const char *fname1, const char *fname2) { - hid_t fid1 = -1; - hid_t fid2 = -1; - hid_t gid1 = -1; + hid_t fid1 = H5I_INVALID_HID; + hid_t fid2 = H5I_INVALID_HID; + hid_t gid1 = H5I_INVALID_HID; hsize_t dims2[2] = { 2, 4 }; int data1[4][2] = { { 0, 0 }, { 0, 0 }, { 0, 0 }, { 0, 0 } }; herr_t status = SUCCEED; @@ -3416,8 +3416,8 @@ out: static int test_comp_vlen_strings(const char *fname1, const char *grp_name, int is_file_new) { int i; - hid_t fid1 = -1; /* file id */ - hid_t gid = -1; + hid_t fid1 = H5I_INVALID_HID; /* file id */ + hid_t gid = H5I_INVALID_HID; /* compound1 datatype */ typedef struct comp1_t { @@ -3534,21 +3534,21 @@ static int test_comp_vlen_strings(const char *fname1, const char *grp_name, int } comp9_t; /* vlen string */ - hid_t sid_vlen_str = -1; /* dataspace ID */ - hid_t tid_vlen_str = -1; /* datatype ID */ + hid_t sid_vlen_str = H5I_INVALID_HID; /* dataspace ID */ + hid_t tid_vlen_str = H5I_INVALID_HID; /* datatype ID */ char vlen_str_buf[] = { "Variable length string" }; hsize_t dims_vlen_str[] = { VLEN_STR_DIM }; /* fixlen string */ - hid_t sid_fixlen_str = -1; /* dataspace ID */ - hid_t tid_fixlen_str = -1; /* datatype ID */ + hid_t sid_fixlen_str = H5I_INVALID_HID; /* dataspace ID */ + hid_t tid_fixlen_str = H5I_INVALID_HID; /* datatype ID */ const char fixlen_str_buf[FIXLEN_STR_SIZE] = { "Fixed length string" }; hsize_t dims_fixlen_str[] = { FIXLEN_STR_DIM }; /* vlen string array */ - hid_t sid_vlen_str_array = -1; /* dataspace ID */ - hid_t tid_vlen_str_array_pre = -1; /* datatype ID */ - hid_t tid_vlen_str_array = -1; /* datatype ID */ + hid_t sid_vlen_str_array = H5I_INVALID_HID; /* dataspace ID */ + hid_t tid_vlen_str_array_pre = H5I_INVALID_HID; /* datatype ID */ + hid_t tid_vlen_str_array = H5I_INVALID_HID; /* datatype ID */ const char *vlen_str_array_buf[VLEN_STR_ARRY_DIM] = { "1 - Variable length string Array", "2 - Testing variable length string array in compound type", @@ -3556,9 +3556,9 @@ static int test_comp_vlen_strings(const char *fname1, const char *grp_name, int hsize_t dims_vlen_str_array[] = { VLEN_STR_ARRY_DIM }; /* fixlen string array */ - hid_t sid_fixlen_str_array = -1; /* dataspace ID */ - hid_t tid_fixlen_str_array_pre = -1; /* datatype ID */ - hid_t tid_fixlen_str_array = -1; /* datatype ID */ + hid_t sid_fixlen_str_array = H5I_INVALID_HID; /* dataspace ID */ + hid_t tid_fixlen_str_array_pre = H5I_INVALID_HID; /* datatype ID */ + hid_t tid_fixlen_str_array = H5I_INVALID_HID; /* datatype ID */ const char *fixlen_str_array_buf[FIXLEN_STR_ARRY_DIM] = { "1 - Fixed length string Array", "2 - Fixed length string Array", "3 - Fixed length string Array" }; @@ -3567,17 +3567,17 @@ static int test_comp_vlen_strings(const char *fname1, const char *grp_name, int /*------------------------------------------ * compound dataset *------------------------------------------*/ - hid_t sid_comp = -1; /* dataspace ID */ - hid_t tid1_comp = -1; /* datatype ID */ - hid_t tid2_comp = -1; /* datatype ID */ - hid_t tid3_comp = -1; /* datatype ID */ - hid_t tid4_comp = -1; /* datatype ID */ - hid_t tid5_comp = -1; /* datatype ID */ - hid_t tid6_comp = -1; /* datatype ID */ - hid_t tid7_comp = -1; /* datatype ID */ - hid_t tid8_comp = -1; /* datatype ID */ - hid_t tid9_comp = -1; /* datatype ID */ - hid_t did_comp = -1; /* dataset ID */ + hid_t sid_comp = H5I_INVALID_HID; /* dataspace ID */ + hid_t tid1_comp = H5I_INVALID_HID; /* datatype ID */ + hid_t tid2_comp = H5I_INVALID_HID; /* datatype ID */ + hid_t tid3_comp = H5I_INVALID_HID; /* datatype ID */ + hid_t tid4_comp = H5I_INVALID_HID; /* datatype ID */ + hid_t tid5_comp = H5I_INVALID_HID; /* datatype ID */ + hid_t tid6_comp = H5I_INVALID_HID; /* datatype ID */ + hid_t tid7_comp = H5I_INVALID_HID; /* datatype ID */ + hid_t tid8_comp = H5I_INVALID_HID; /* datatype ID */ + hid_t tid9_comp = H5I_INVALID_HID; /* datatype ID */ + hid_t did_comp = H5I_INVALID_HID; /* dataset ID */ hsize_t dims_comp[] = { COMP_DIM }; herr_t status = SUCCEED; @@ -4020,7 +4020,7 @@ static int test_comp_vlen_strings(const char *fname1, const char *grp_name, int } H5Dclose(did_comp); - did_comp = -1; + did_comp = H5I_INVALID_HID; out: /*----------------------------------------------------------------------- @@ -4091,9 +4091,9 @@ out: static int test_enums(const char *fname) { - hid_t fid = -1; + hid_t fid = H5I_INVALID_HID; - hid_t tid = -1; + hid_t tid = H5I_INVALID_HID; int enum_val = -1; /* The data in the two arrays cover the following cases: @@ -4217,13 +4217,13 @@ static void test_comps_array(const char *fname, const char *dset, const char *at cmpd1_t wdata[SDIM_DSET]; /* dataset with compound1 */ - hid_t fid = -1; /* HDF5 File IDs */ - hid_t did_dset = -1; /* Dataset ID */ - hid_t sid_dset = -1; /* Dataset space ID */ - hid_t tid_cmpd1 = -1; /* Compound1 type ID */ - hid_t tid_arry1 = -1; /* Array type ID in compound1 */ - hid_t tid_cmpd2 = -1; /* Compound2 type ID */ - hid_t tid_attr = -1; + hid_t fid = H5I_INVALID_HID; /* HDF5 File IDs */ + hid_t did_dset = H5I_INVALID_HID; /* Dataset ID */ + hid_t sid_dset = H5I_INVALID_HID; /* Dataset space ID */ + hid_t tid_cmpd1 = H5I_INVALID_HID; /* Compound1 type ID */ + hid_t tid_arry1 = H5I_INVALID_HID; /* Array type ID in compound1 */ + hid_t tid_cmpd2 = H5I_INVALID_HID; /* Compound2 type ID */ + hid_t tid_attr = H5I_INVALID_HID; hsize_t sdims_dset[] = { SDIM_DSET }; hsize_t sdims_cmpd_arry[] = { SDIM_CMPD_ARRAY }; int i, j; @@ -4326,13 +4326,13 @@ static void test_comps_vlen(const char * fname, const char *dset, const char *at cmpd1_t wdata[SDIM_DSET]; /* Dataset for compound1 */ - hid_t fid = -1; /* HDF5 File ID */ - hid_t did_dset = -1; /* dataset ID */ - hid_t sid_dset = -1; /* dataset space ID */ - hid_t tid_attr = -1; - hid_t tid_cmpd2 = -1; /* compound2 type ID */ - hid_t tid_cmpd1 = -1; /* compound1 type ID */ - hid_t tid_cmpd1_vlen = -1; + hid_t fid = H5I_INVALID_HID; /* HDF5 File ID */ + hid_t did_dset = H5I_INVALID_HID; /* dataset ID */ + hid_t sid_dset = H5I_INVALID_HID; /* dataset space ID */ + hid_t tid_attr = H5I_INVALID_HID; + hid_t tid_cmpd2 = H5I_INVALID_HID; /* compound2 type ID */ + hid_t tid_cmpd1 = H5I_INVALID_HID; /* compound1 type ID */ + hid_t tid_cmpd1_vlen = H5I_INVALID_HID; hsize_t sdims_dset[] = { SDIM_DSET }; unsigned i, j; /* counting variables */ @@ -4442,15 +4442,15 @@ static void test_comps_array_vlen(const char * fname, const char *dset, const ch } cmpd1_t; cmpd1_t wdata[SDIM_DSET]; /* Information to write */ - hid_t fid = -1; /* HDF5 File IDs */ - hid_t did_dset = -1; /* Dataset ID */ - hid_t sid_dset = -1; /* Dataspace ID */ - hid_t tid_attr = -1; - hid_t tid_cmpd1 = -1; /* Compound1 Datatype ID */ - hid_t tid_arry1 = -1; /* Array Datatype ID */ - hid_t tid_cmpd2 = -1; /* Compound2 Datatype ID */ - hid_t tid_cmpd2_vlen = -1; - hid_t tid_cmpd3 = -1; /* Compound3 Datatype ID */ + hid_t fid = H5I_INVALID_HID; /* HDF5 File IDs */ + hid_t did_dset = H5I_INVALID_HID; /* Dataset ID */ + hid_t sid_dset = H5I_INVALID_HID; /* Dataspace ID */ + hid_t tid_attr = H5I_INVALID_HID; + hid_t tid_cmpd1 = H5I_INVALID_HID; /* Compound1 Datatype ID */ + hid_t tid_arry1 = H5I_INVALID_HID; /* Array Datatype ID */ + hid_t tid_cmpd2 = H5I_INVALID_HID; /* Compound2 Datatype ID */ + hid_t tid_cmpd2_vlen = H5I_INVALID_HID; + hid_t tid_cmpd3 = H5I_INVALID_HID; /* Compound3 Datatype ID */ hsize_t sdims_dset[] = { SDIM_DSET }; hsize_t sdims_arry[] = { SDIM_CMPD_ARRAY }; unsigned i, j, k; /* counting variables */ @@ -4584,15 +4584,15 @@ static void test_comps_vlen_arry(const char * fname, const char *dset, const cha cmpd1_t wdata[SDIM_DSET]; /* Dataset for compound1 */ - hid_t fid = -1; /* HDF5 File ID */ - hid_t did_dset = -1; /* dataset ID */ - hid_t sid_dset = -1; /* dataset space ID */ - hid_t tid_attr = -1; - hid_t tid_cmpd3 = -1; /* compound3 type ID */ - hid_t tid_cmpd2 = -1; /* compound2 type ID */ - hid_t tid_cmpd2_arry = -1; - hid_t tid_cmpd1 = -1; /* compound1 type ID */ - hid_t tid_cmpd1_vlen = -1; + hid_t fid = H5I_INVALID_HID; /* HDF5 File ID */ + hid_t did_dset = H5I_INVALID_HID; /* dataset ID */ + hid_t sid_dset = H5I_INVALID_HID; /* dataset space ID */ + hid_t tid_attr = H5I_INVALID_HID; + hid_t tid_cmpd3 = H5I_INVALID_HID; /* compound3 type ID */ + hid_t tid_cmpd2 = H5I_INVALID_HID; /* compound2 type ID */ + hid_t tid_cmpd2_arry = H5I_INVALID_HID; + hid_t tid_cmpd1 = H5I_INVALID_HID; /* compound1 type ID */ + hid_t tid_cmpd1_vlen = H5I_INVALID_HID; hsize_t sdims_dset[] = { SDIM_DSET }; hsize_t sdims_cmpd_arry[] = { SDIM_CMPD_ARRAY }; @@ -4717,14 +4717,14 @@ static void test_comps_vlen_arry(const char * fname, const char *dset, const cha #define DIM_ARRY 3 static void test_data_nocomparables(const char * fname, int make_diffs) { - hid_t fid = -1; - hid_t gid1 = -1; - hid_t gid2 = -1; - hid_t did1 = -1; - hid_t did2 = -1; - hid_t sid1 = -1; - hid_t tid_dset1 = -1; - hid_t tid_attr1 = -1; + hid_t fid = H5I_INVALID_HID; + hid_t gid1 = H5I_INVALID_HID; + hid_t gid2 = H5I_INVALID_HID; + hid_t did1 = H5I_INVALID_HID; + hid_t did2 = H5I_INVALID_HID; + hid_t sid1 = H5I_INVALID_HID; + hid_t tid_dset1 = H5I_INVALID_HID; + hid_t tid_attr1 = H5I_INVALID_HID; hsize_t dims1_1[1] = { DIM_ARRY }; hsize_t dims1_2[1] = { DIM_ARRY + 1 }; hsize_t dims2[2] = { DIM_ARRY, 1 }; @@ -4913,14 +4913,14 @@ out: static void test_objs_nocomparables(const char *fname1, const char *fname2) { - hid_t fid1 = -1; - hid_t fid2 = -1; - hid_t topgid1 = -1; - hid_t topgid2 = -1; - hid_t gid1 = -1; - hid_t tid1 = -1; - hid_t gid2 = -1; - hid_t tid2 = -1; + hid_t fid1 = H5I_INVALID_HID; + hid_t fid2 = H5I_INVALID_HID; + hid_t topgid1 = H5I_INVALID_HID; + hid_t topgid2 = H5I_INVALID_HID; + hid_t gid1 = H5I_INVALID_HID; + hid_t tid1 = H5I_INVALID_HID; + hid_t gid2 = H5I_INVALID_HID; + hid_t tid2 = H5I_INVALID_HID; hsize_t dims[1] = { DIM_ARRY }; int data1[DIM_ARRY] = { 1, 1, 1 }; int data2[DIM_ARRY] = { 2, 2, 2 }; @@ -5039,12 +5039,12 @@ static hid_t mkstr(int size, H5T_str_t pad) *-------------------------------------------------------------------------*/ static void test_objs_strings(const char *fname1, const char *fname2) { - hid_t fid1 = -1; - hid_t fid2 = -1; - hid_t dataset = -1; - hid_t space = -1; - hid_t f_type = -1; - hid_t m_type = -1; + hid_t fid1 = H5I_INVALID_HID; + hid_t fid2 = H5I_INVALID_HID; + hid_t dataset = H5I_INVALID_HID; + hid_t space = H5I_INVALID_HID; + hid_t f_type = H5I_INVALID_HID; + hid_t m_type = H5I_INVALID_HID; hsize_t dims1[] = { 3, 4 }; char string1A[12][3] = { "s1", "s2", "s3", "s4", "s5", "s6", "s", "s", "s9", "s0", "s1", "s2" }; @@ -5211,9 +5211,9 @@ void write_attr_strings(hid_t loc_id, const char* dset_name, hid_t fid, int make RED, GREEN } e_t; - hid_t aid = -1; - hid_t sid = -1; - hid_t tid = -1; + hid_t aid = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; + hid_t tid = H5I_INVALID_HID; herr_t status; int val, i, j, k, l, n; float f; @@ -6202,9 +6202,9 @@ void write_attr_in(hid_t loc_id, const char* dset_name, hid_t fid, int make_diff RED, GREEN } e_t; - hid_t aid = -1; - hid_t sid = -1; - hid_t tid = -1; + hid_t aid = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; + hid_t tid = H5I_INVALID_HID; herr_t status; int val, i, j, k, l, n; float f; @@ -7193,10 +7193,10 @@ void write_dset_in(hid_t loc_id, const char* dset_name, hid_t fid, int make_diff RED, GREEN } e_t; - hid_t did = -1; - hid_t sid = -1; - hid_t tid = -1; - hid_t dcpl = -1; + hid_t did = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; + hid_t tid = H5I_INVALID_HID; + hid_t dcpl = H5I_INVALID_HID; herr_t status; int val, i, j, k, l, n; float f; @@ -7417,9 +7417,9 @@ void write_dset_in(hid_t loc_id, const char* dset_name, hid_t fid, int make_diff { double *dbuf; /* information to write */ - hid_t ldid = -1; /* dataset ID */ - hid_t lsid = -1; /* dataspace ID */ - hid_t ltid = -1; /* datatype ID */ + hid_t ldid = H5I_INVALID_HID; /* dataset ID */ + hid_t lsid = H5I_INVALID_HID; /* dataspace ID */ + hid_t ltid = H5I_INVALID_HID; /* datatype ID */ size_t size; hsize_t sdims[] = { 1 }; hsize_t tdims[] = { H5TOOLS_MALLOCSIZE / sizeof(double) + 1 }; @@ -7820,13 +7820,13 @@ static void gen_datareg(hid_t fid, int make_diffs /* flag to modify data buffers */) { /* data dataset */ - hid_t did1 = -1; /* dataset ID */ - hid_t sid1 = -1; /* dataspace ID */ + hid_t did1 = H5I_INVALID_HID; /* dataset ID */ + hid_t sid1 = H5I_INVALID_HID; /* dataspace ID */ hsize_t dims1[2] = { 10, 10 };/* dimensions */ int *buf; /* dataset buffer */ /* reference dataset */ - hid_t did2 = -1; /* dataset ID */ - hid_t sid2 = -1; /* dataspace ID */ + hid_t did2 = H5I_INVALID_HID; /* dataset ID */ + hid_t sid2 = H5I_INVALID_HID; /* dataspace ID */ hsize_t dims2[] = { 2 }; /* 2 references */ hdset_reg_ref_t *rbuf; /* buffer for write the references */ hsize_t start[10]; /* starting location of hyperslab */ @@ -7931,12 +7931,12 @@ void gen_datareg(hid_t fid, int make_diffs /* flag to modify data buffers */) static int test_hyperslab(const char *fname, int make_diffs /* flag to modify data buffers */) { - hid_t did = -1; - hid_t fid = -1; - hid_t f_sid = -1; - hid_t m_sid = -1; - hid_t tid = -1; - hid_t dcpl = -1; + hid_t did = H5I_INVALID_HID; + hid_t fid = H5I_INVALID_HID; + hid_t f_sid = H5I_INVALID_HID; + hid_t m_sid = H5I_INVALID_HID; + hid_t tid = H5I_INVALID_HID; + hid_t dcpl = H5I_INVALID_HID; hsize_t dims[1] = { GBLL }; /* dataset dimensions */ hsize_t hs_size[1] = { GBLL / (1024 * 1024) }; /* hyperslab dimensions */ hsize_t chunk_dims[1] = { GBLL / 1024 }; /* chunk dimensions */ @@ -8030,8 +8030,8 @@ out: static int write_attr(hid_t loc_id, int rank, hsize_t *dims, const char *name, hid_t tid, void *buf) { - hid_t aid = -1; - hid_t sid = -1; + hid_t aid = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; /* create a space */ if ((sid = H5Screate_simple(rank, dims, NULL)) < 0) @@ -8070,8 +8070,8 @@ out: static herr_t write_dset(hid_t loc_id, int rank, hsize_t *dims, const char *name, hid_t tid, void *buf) { - hid_t did = -1; - hid_t sid = -1; + hid_t did = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; /* create a space */ if((sid = H5Screate_simple(rank, dims, NULL)) < 0) diff --git a/tools/test/h5diff/testfiles/h5diff_58.txt b/tools/test/h5diff/testfiles/h5diff_58.txt index d27a0c9..da147bc 100644 --- a/tools/test/h5diff/testfiles/h5diff_58.txt +++ b/tools/test/h5diff/testfiles/h5diff_58.txt @@ -1,3 +1,4 @@ + dataset: </refreg> and </refreg> Referenced dataset 10784 10784 ------------------------------------------------------------ @@ -8,4 +9,7 @@ point #1 (2,2) (3,3) point #3 (1,6) (2,5) point #4 (2,8) (1,7) 4 differences found + obj1 obj2 + -------------------------------------- +Attributes status: 0 common, 0 only in obj1, 0 only in obj2 EXIT CODE: 1 diff --git a/tools/test/h5diff/testfiles/h5diff_58_ref.txt b/tools/test/h5diff/testfiles/h5diff_58_ref.txt new file mode 100644 index 0000000..6fa2299 --- /dev/null +++ b/tools/test/h5diff/testfiles/h5diff_58_ref.txt @@ -0,0 +1,37 @@ + +dataset: </g1/reference2D> and </g1/reference2D> +size: [2] [2] +position difference +------------------------------------------------------------ +[ 0 ] 1 0 1 +[ 1 ] 2 0 2 +size: [2] [2] +position difference +------------------------------------------------------------ +[ 0 ] 1 0 1 +[ 1 ] 2 0 2 +size: [2] [2] +position difference +------------------------------------------------------------ +[ 0 ] 1 0 1 +[ 1 ] 2 0 2 +size: [2] [2] +position difference +------------------------------------------------------------ +[ 0 ] 1 0 1 +[ 1 ] 2 0 2 +size: [2] [2] +position difference +------------------------------------------------------------ +[ 0 ] 1 0 1 +[ 1 ] 2 0 2 +size: [2] [2] +position difference +------------------------------------------------------------ +[ 0 ] 1 0 1 +[ 1 ] 2 0 2 +12 differences found + obj1 obj2 + -------------------------------------- +Attributes status: 0 common, 0 only in obj1, 0 only in obj2 +EXIT CODE: 1 diff --git a/tools/test/h5diff/testfiles/h5diff_reg.txt b/tools/test/h5diff/testfiles/h5diff_reg.txt new file mode 100644 index 0000000..d4f5415 --- /dev/null +++ b/tools/test/h5diff/testfiles/h5diff_reg.txt @@ -0,0 +1,15 @@ + +dataset: </Dataset3> and </Dataset3> +attribute: <Attr1 of <(null)>> and <Attr1 of <(null)>> +0 differences found +Warning: Cannot open referenced attribute: attribute 1 +Warning: Cannot open referenced attribute: attribute 2 +attribute: <Attr2 of <(null)>> and <Attr2 of <(null)>> +0 differences found +attribute: <Attr3 of <(null)>> and <Attr3 of <(null)>> +0 differences found +0 differences found + obj1 obj2 + -------------------------------------- +Attributes status: 0 common, 0 only in obj1, 0 only in obj2 +EXIT CODE: 0 diff --git a/tools/test/h5diff/testh5diff.sh.in b/tools/test/h5diff/testh5diff.sh.in index 557d2ff..2d490a8 100644 --- a/tools/test/h5diff/testh5diff.sh.in +++ b/tools/test/h5diff/testh5diff.sh.in @@ -150,6 +150,19 @@ $SRC_TOOLS_TESTFILES/vds/5_c.h5 $SRC_TOOLS_TESTFILES/vds/5_vds.h5 " +LIST_HDF5_STD_REF_OBJ_TEST_FILES=" +$SRC_TOOLS_TESTFILES/trefer_attr.h5 +$SRC_TOOLS_TESTFILES/trefer_compat.h5 +$SRC_TOOLS_TESTFILES/trefer_ext1.h5 +$SRC_TOOLS_TESTFILES/trefer_ext2.h5 +$SRC_TOOLS_TESTFILES/trefer_grp.h5 +$SRC_TOOLS_TESTFILES/trefer_obj_del.h5 +$SRC_TOOLS_TESTFILES/trefer_obj.h5 +$SRC_TOOLS_TESTFILES/trefer_param.h5 +$SRC_TOOLS_TESTFILES/trefer_reg_1d.h5 +$SRC_TOOLS_TESTFILES/trefer_reg.h5 +" + LIST_OTHER_TEST_FILES=" $SRC_H5DIFF_TESTFILES/h5diff_10.txt $SRC_H5DIFF_TESTFILES/h5diff_100.txt @@ -259,6 +272,7 @@ $SRC_H5DIFF_TESTFILES/h5diff_55.txt $SRC_H5DIFF_TESTFILES/h5diff_56.txt $SRC_H5DIFF_TESTFILES/h5diff_57.txt $SRC_H5DIFF_TESTFILES/h5diff_58.txt +$SRC_H5DIFF_TESTFILES/h5diff_58_ref.txt $SRC_H5DIFF_TESTFILES/h5diff_59.txt $SRC_H5DIFF_TESTFILES/h5diff_500.txt $SRC_H5DIFF_TESTFILES/h5diff_501.txt @@ -338,6 +352,7 @@ $SRC_H5DIFF_TESTFILES/h5diff_80.txt $SRC_H5DIFF_TESTFILES/h5diff_90.txt $SRC_H5DIFF_TESTFILES/h5diff_8625.txt $SRC_H5DIFF_TESTFILES/h5diff_8639.txt +$SRC_H5DIFF_TESTFILES/h5diff_reg.txt $SRC_H5DIFF_TESTFILES/h5diff_v1.txt $SRC_H5DIFF_TESTFILES/h5diff_v2.txt $SRC_H5DIFF_TESTFILES/h5diff_v3.txt @@ -347,7 +362,7 @@ $SRC_H5DIFF_TESTFILES/h5diff_vlstr.txt # # copy test files and expected output files from source dirs to test dir # -COPY_TESTFILES="$LIST_HDF5_TEST_FILES $LIST_HDF5_VDS_TEST_FILES $LIST_OTHER_TEST_FILES $LIST_HDF5_TEST_FILES_XML $LIST_OTHER_TEST_FILES_XML" +COPY_TESTFILES="$LIST_HDF5_TEST_FILES $LIST_HDF5_VDS_TEST_FILES $LIST_HDF5_STD_REF_OBJ_TEST_FILES $LIST_OTHER_TEST_FILES $LIST_HDF5_TEST_FILES_XML $LIST_OTHER_TEST_FILES_XML" COPY_TESTFILES_TO_TESTDIR() { @@ -691,7 +706,10 @@ TOOLTEST h5diff_56.txt -v h5diff_dtypes.h5 h5diff_dtypes.h5 dset6a dset6b TOOLTEST h5diff_57.txt -v h5diff_dtypes.h5 h5diff_dtypes.h5 dset7a dset7b # 5.8 (region reference) -TOOLTEST h5diff_58.txt -v h5diff_dset1.h5 h5diff_dset2.h5 refreg +TOOLTEST h5diff_58.txt -v2 h5diff_dset1.h5 h5diff_dset2.h5 refreg +TOOLTEST h5diff_58_ref.txt -v2 h5diff_dset1.h5 h5diff_dset2.h5 /g1/reference2D +# STD_REF_OBJ +TOOLTEST h5diff_reg.txt -v2 trefer_attr.h5 trefer_ext2.h5 Dataset3 Dataset3 # test for both dset and attr with same type but with different size # ( HDDFV-7942 ) diff --git a/tools/test/h5dump/CMakeTests.cmake b/tools/test/h5dump/CMakeTests.cmake index 62b2619..2e731f3 100644 --- a/tools/test/h5dump/CMakeTests.cmake +++ b/tools/test/h5dump/CMakeTests.cmake @@ -198,6 +198,16 @@ ${HDF5_TOOLS_DIR}/testfiles/h5dump-help.txt ${HDF5_TOOLS_DIR}/testfiles/out3.h5import ${HDF5_TOOLS_DIR}/testfiles/zerodim.ddl + #STD_REF_OBJ files + ${HDF5_TOOLS_DIR}/testfiles/trefer_attrR.ddl + ${HDF5_TOOLS_DIR}/testfiles/trefer_compatR.ddl + ${HDF5_TOOLS_DIR}/testfiles/trefer_extR.ddl + ${HDF5_TOOLS_DIR}/testfiles/trefer_grpR.ddl + ${HDF5_TOOLS_DIR}/testfiles/trefer_obj_delR.ddl + ${HDF5_TOOLS_DIR}/testfiles/trefer_objR.ddl + ${HDF5_TOOLS_DIR}/testfiles/trefer_paramR.ddl + ${HDF5_TOOLS_DIR}/testfiles/trefer_reg_1dR.ddl + ${HDF5_TOOLS_DIR}/testfiles/trefer_regR.ddl ) set (HDF5_N_REFERENCE_FILES tall-3 @@ -322,6 +332,18 @@ ${HDF5_TOOLS_DIR}/testfiles/tvms.h5 ${HDF5_TOOLS_DIR}/testfiles/t128bit_float.h5 ${HDF5_TOOLS_DIR}/testfiles/zerodim.h5 + #STD_REF_OBJ files + ${HDF5_TOOLS_DIR}/testfiles/trefer_attr.h5 + ${HDF5_TOOLS_DIR}/testfiles/trefer_compat.h5 + ${HDF5_TOOLS_DIR}/testfiles/trefer_ext1.h5 + ${HDF5_TOOLS_DIR}/testfiles/trefer_ext2.h5 + ${HDF5_TOOLS_DIR}/testfiles/trefer_grp.h5 + ${HDF5_TOOLS_DIR}/testfiles/trefer_obj_del.h5 + ${HDF5_TOOLS_DIR}/testfiles/trefer_obj.h5 + ${HDF5_TOOLS_DIR}/testfiles/trefer_param.h5 + ${HDF5_TOOLS_DIR}/testfiles/trefer_reg_1d.h5 + ${HDF5_TOOLS_DIR}/testfiles/trefer_reg.h5 + ) set (HDF5_ERROR_REFERENCE_TEST_FILES ${PROJECT_SOURCE_DIR}/errfiles/filter_fail.err @@ -1108,6 +1130,17 @@ ADD_H5ERR_MASK_TEST (tattrregR 0 "NULL token size" -R --enable-error-stack tattrreg.h5) ADD_H5_EXPORT_TEST (tbinregR tdatareg.h5 0 --enable-error-stack -d /Dataset1 -s 0 -R -y -o) + # test for 1.12 region references + ADD_H5_TEST (trefer_attrR 0 --enable-error-stack -R trefer_attr.h5) + ADD_H5_TEST (trefer_compatR 0 --enable-error-stack -R trefer_compat.h5) + ADD_H5_TEST (trefer_extR 0 --enable-error-stack -R trefer_ext2.h5) + ADD_H5_TEST (trefer_grpR 0 --enable-error-stack -R trefer_grp.h5) + ADD_H5_TEST (trefer_obj_delR 0 --enable-error-stack -R trefer_obj_del.h5) + ADD_H5_TEST (trefer_objR 0 --enable-error-stack -R trefer_obj.h5) + ADD_H5_TEST (trefer_paramR 0 --enable-error-stack -R trefer_param.h5) + ADD_H5_TEST (trefer_regR 0 --enable-error-stack -R trefer_reg.h5) + ADD_H5_TEST (trefer_reg_1dR 0 --enable-error-stack -R trefer_reg_1d.h5) + # tests for group creation order # "1" tracked, "2" name, root tracked ADD_H5_TEST (tordergr1 0 --enable-error-stack --group=1 --sort_by=creation_order --sort_order=ascending tordergr.h5) diff --git a/tools/test/h5dump/h5dumpgentest.c b/tools/test/h5dump/h5dumpgentest.c index 4ceed73..a686660 100644 --- a/tools/test/h5dump/h5dumpgentest.c +++ b/tools/test/h5dump/h5dumpgentest.c @@ -638,11 +638,11 @@ static void gent_softlink(void) #define NY 2 static int gent_softlink2(void) { - hid_t fileid1 = -1; - hid_t gid1 = -1, gid2 = -1; - hid_t datatype = -1; - hid_t dset1 = -1, dset2 = -1; - hid_t dataspace = -1; + hid_t fileid1 = H5I_INVALID_HID; + hid_t gid1 = H5I_INVALID_HID, gid2 = H5I_INVALID_HID; + hid_t datatype = H5I_INVALID_HID; + hid_t dset1 = H5I_INVALID_HID, dset2 = H5I_INVALID_HID; + hid_t dataspace = H5I_INVALID_HID; hsize_t dimsf[2]; /* dataset dimensions */ int data1[NX][NY] = {{0,0},{1,1},{2,2},{3,3}}; int data2[NX][NY] = {{0,0},{0,1},{0,2},{3,3}}; @@ -2548,7 +2548,7 @@ static void gent_opaque(void) static void gent_bitfields(void) { - hid_t file, grp=-1, type=-1, space=-1, dset=-1; + hid_t file, grp=H5I_INVALID_HID, type=H5I_INVALID_HID, space=H5I_INVALID_HID, dset=H5I_INVALID_HID; size_t i; hsize_t nelmts; unsigned char buf[32]; @@ -2565,7 +2565,7 @@ static void gent_bitfields(void) goto error; for(i = 0; i < sizeof buf; i++) - buf[i] = (unsigned char)0xff ^ (unsigned char)i; + buf[i] = (uint8_t)(0xff ^ i); if(H5Dwrite(dset, type, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) goto error; if(H5Sclose(space) < 0) goto error; @@ -2579,7 +2579,7 @@ static void gent_bitfields(void) (dset = H5Dcreate2(grp, "bitfield_2", type, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto error; for(i = 0; i < sizeof buf; i++) - buf[i] = (unsigned char)0xff ^ (unsigned char)i; + buf[i] = (uint8_t)(0xff ^ i); if(H5Dwrite(dset, type, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) goto error; if(H5Sclose(space) < 0) goto error; @@ -3471,10 +3471,10 @@ static void gent_array7(void) /* Test the boundary of the display output buffer at the reallocation event */ static void gent_array8(void) { - hid_t file = -1; /* Handles */ - hid_t filetype = -1; /* Handles */ - hid_t space = -1; /* Handles */ - hid_t dset = -1; /* Handles */ + hid_t file = H5I_INVALID_HID; /* Handles */ + hid_t filetype = H5I_INVALID_HID; /* Handles */ + hid_t space = H5I_INVALID_HID; /* Handles */ + hid_t dset = H5I_INVALID_HID; /* Handles */ herr_t status = -1; hsize_t sdims[] = {F64_DIM0}; hsize_t tdims[] = {F64_DIM1}; @@ -6353,12 +6353,12 @@ gent_binary(void) static void gent_bigdims(void) { - hid_t fid = -1; - hid_t did = -1; - hid_t f_sid = -1; - hid_t m_sid = -1; - hid_t tid = -1; - hid_t dcpl = -1; + hid_t fid = H5I_INVALID_HID; + hid_t did = H5I_INVALID_HID; + hid_t f_sid = H5I_INVALID_HID; + hid_t m_sid = H5I_INVALID_HID; + hid_t tid = H5I_INVALID_HID; + hid_t dcpl = H5I_INVALID_HID; hsize_t dims[1]={DIM_4GB}; /* dataset dimensions */ hsize_t chunk_dims[1]={1024}; /* chunk dimensions */ hsize_t hs_start[1]; @@ -6418,19 +6418,19 @@ gent_bigdims(void) /* close */ if(H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; if(H5Sclose(f_sid) < 0) goto out; - f_sid = -1; + f_sid = H5I_INVALID_HID; if(H5Sclose(m_sid) < 0) goto out; - m_sid = -1; + m_sid = H5I_INVALID_HID; if(H5Pclose(dcpl) < 0) goto out; - dcpl = -1; + dcpl = H5I_INVALID_HID; if(H5Dclose(did) < 0) goto out; - did = -1; + did = H5I_INVALID_HID; ret = H5Fclose(fid); HDassert(ret >= 0); @@ -6494,10 +6494,10 @@ gent_hyperslab(void) static void gent_group_creation_order(void) { - hid_t fid = -1; /* file ID */ - hid_t gid = -1; /* group ID */ - hid_t gcpl_id = -1; /* group creation property list ID */ - hid_t fcpl_id = -1; /* file creation property list ID (to set root group order) */ + hid_t fid = H5I_INVALID_HID; /* file ID */ + hid_t gid = H5I_INVALID_HID; /* group ID */ + hid_t gcpl_id = H5I_INVALID_HID; /* group creation property list ID */ + hid_t fcpl_id = H5I_INVALID_HID; /* file creation property list ID (to set root group order) */ if((fcpl_id = H5Pcreate(H5P_FILE_CREATE)) < 0) goto out; @@ -6523,45 +6523,45 @@ gent_group_creation_order(void) goto out; if(H5Gclose(gid) < 0) goto out; - gid = -1; + gid = H5I_INVALID_HID; if((gid = H5Gcreate2(fid, "2/c", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; if(H5Gclose(gid) < 0) goto out; - gid = -1; + gid = H5I_INVALID_HID; if((gid = H5Gcreate2(fid, "2/b", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; if(H5Gclose(gid) < 0) goto out; - gid = -1; + gid = H5I_INVALID_HID; if((gid = H5Gcreate2(fid, "2/a", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; if(H5Gclose(gid) < 0) goto out; - gid = -1; + gid = H5I_INVALID_HID; if((gid = H5Gcreate2(fid, "2/a/a2", H5P_DEFAULT, gcpl_id, H5P_DEFAULT)) < 0) goto out; if(H5Gclose(gid) < 0) goto out; - gid = -1; + gid = H5I_INVALID_HID; if((gid = H5Gcreate2(fid, "2/a/a1", H5P_DEFAULT, gcpl_id, H5P_DEFAULT)) < 0) goto out; if(H5Gclose(gid) < 0) goto out; - gid = -1; + gid = H5I_INVALID_HID; if((gid = H5Gcreate2(fid, "2/a/a2/a22", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; if(H5Gclose(gid) < 0) goto out; - gid = -1; + gid = H5I_INVALID_HID; if((gid = H5Gcreate2(fid, "2/a/a2/a21", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; if(H5Gclose(gid) < 0) goto out; - gid = -1; + gid = H5I_INVALID_HID; /*------------------------------------------------------------------------- @@ -6576,56 +6576,56 @@ gent_group_creation_order(void) goto out; if(H5Gclose(gid) < 0) goto out; - gid = -1; + gid = H5I_INVALID_HID; if((gid = H5Gcreate2(fid, "1/c", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; if(H5Gclose(gid) < 0) goto out; - gid = -1; + gid = H5I_INVALID_HID; if((gid = H5Gcreate2(fid, "1/b", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; if(H5Gclose(gid) < 0) goto out; - gid = -1; + gid = H5I_INVALID_HID; if((gid = H5Gcreate2(fid, "1/a", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; if(H5Gclose(gid) < 0) goto out; - gid = -1; + gid = H5I_INVALID_HID; if((gid = H5Gcreate2(fid, "1/a/a2", H5P_DEFAULT, gcpl_id, H5P_DEFAULT)) < 0) goto out; if(H5Gclose(gid) < 0) goto out; - gid = -1; + gid = H5I_INVALID_HID; if((gid = H5Gcreate2(fid, "1/a/a1", H5P_DEFAULT, gcpl_id, H5P_DEFAULT)) < 0) goto out; if(H5Gclose(gid) < 0) goto out; - gid = -1; + gid = H5I_INVALID_HID; if((gid = H5Gcreate2(fid, "1/a/a2/a22", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; if(H5Gclose(gid) < 0) goto out; - gid = -1; + gid = H5I_INVALID_HID; if((gid = H5Gcreate2(fid, "1/a/a2/a21", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; if(H5Gclose(gid) < 0) goto out; - gid = -1; + gid = H5I_INVALID_HID; if(H5Pclose(gcpl_id) < 0) goto out; - gcpl_id = -1; + gcpl_id = H5I_INVALID_HID; if(H5Pclose(fcpl_id) < 0) goto out; - fcpl_id = -1; + fcpl_id = H5I_INVALID_HID; if(H5Fclose(fid) < 0) goto out; - fid = -1; + fid = H5I_INVALID_HID; return; @@ -6653,15 +6653,15 @@ gent_group_creation_order(void) static void gent_attr_creation_order(void) { - hid_t fid = -1; /* file id */ - hid_t gid = -1; /* group id */ - hid_t did = -1; /* dataset id */ - hid_t sid = -1; /* space id */ - hid_t aid = -1; /* attribute id */ - hid_t tid = -1; /* datatype id */ - hid_t gcpl_id = -1; /* group creation property list ID */ - hid_t dcpl_id = -1; /* dataset creation property list ID */ - hid_t tcpl_id = -1; /* datatype creation property list ID */ + hid_t fid = H5I_INVALID_HID; /* file id */ + hid_t gid = H5I_INVALID_HID; /* group id */ + hid_t did = H5I_INVALID_HID; /* dataset id */ + hid_t sid = H5I_INVALID_HID; /* space id */ + hid_t aid = H5I_INVALID_HID; /* attribute id */ + hid_t tid = H5I_INVALID_HID; /* datatype id */ + hid_t gcpl_id = H5I_INVALID_HID; /* group creation property list ID */ + hid_t dcpl_id = H5I_INVALID_HID; /* dataset creation property list ID */ + hid_t tcpl_id = H5I_INVALID_HID; /* datatype creation property list ID */ int i; const char *attr_name[3] = {"c", "b", "a" }; @@ -6714,12 +6714,12 @@ gent_attr_creation_order(void) /* close attribute */ if(H5Aclose(aid) < 0) goto out; - aid = -1; + aid = H5I_INVALID_HID; } /* end for */ if(H5Dclose(did) < 0) goto out; - did = -1; + did = H5I_INVALID_HID; /*------------------------------------------------------------------------- @@ -6740,12 +6740,12 @@ gent_attr_creation_order(void) /* close attribute */ if(H5Aclose(aid) < 0) goto out; - aid = -1; + aid = H5I_INVALID_HID; } /* end for */ if(H5Dclose(did) < 0) goto out; - did = -1; + did = H5I_INVALID_HID; @@ -6766,12 +6766,12 @@ gent_attr_creation_order(void) /* close attribute */ if(H5Aclose(aid) < 0) goto out; - aid = -1; + aid = H5I_INVALID_HID; } /* end for */ if(H5Gclose(gid) < 0) goto out; - gid = -1; + gid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * create a group without creation order tracked for attributes and atributes in it @@ -6790,12 +6790,12 @@ gent_attr_creation_order(void) /* close attribute */ if(H5Aclose(aid) < 0) goto out; - aid = -1; + aid = H5I_INVALID_HID; } /* end for */ if(H5Gclose(gid) < 0) goto out; - gid = -1; + gid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * create a named datatype with creation order tracked for attributes and atributes in it @@ -6817,12 +6817,12 @@ gent_attr_creation_order(void) /* close attribute */ if(H5Aclose(aid) < 0) goto out; - aid = -1; + aid = H5I_INVALID_HID; } /* end for */ if(H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * create a named datatype without creation order tracked for attributes and atributes in it @@ -6844,12 +6844,12 @@ gent_attr_creation_order(void) /* close attribute */ if(H5Aclose(aid) < 0) goto out; - aid = -1; + aid = H5I_INVALID_HID; } /* end for */ if(H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * add some attributes to the root group @@ -6867,12 +6867,12 @@ gent_attr_creation_order(void) /* close attribute */ if(H5Aclose(aid) < 0) goto out; - aid = -1; + aid = H5I_INVALID_HID; } /* end for */ if(H5Gclose(gid) < 0) goto out; - gid = -1; + gid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * close @@ -6880,19 +6880,19 @@ gent_attr_creation_order(void) */ if(H5Sclose(sid) < 0) goto out; - sid = -1; + sid = H5I_INVALID_HID; if(H5Pclose(dcpl_id) < 0) goto out; - dcpl_id = -1; + dcpl_id = H5I_INVALID_HID; if(H5Pclose(gcpl_id) < 0) goto out; - gcpl_id = -1; + gcpl_id = H5I_INVALID_HID; if(H5Pclose(tcpl_id) < 0) goto out; - tcpl_id = -1; + tcpl_id = H5I_INVALID_HID; if(H5Fclose(fid) < 0) goto out; - fid = -1; + fid = H5I_INVALID_HID; @@ -9797,7 +9797,7 @@ static void gent_bitnopaquefields(void) uint64_t d; } s_t; - hid_t file, grp=-1, type=-1, space=-1, dset=-1; + hid_t file_id=H5I_INVALID_HID, grp=H5I_INVALID_HID, type=H5I_INVALID_HID, space=H5I_INVALID_HID, dset=H5I_INVALID_HID; size_t i; hsize_t nelmts = F80_DIM32; uint8_t buf[F80_DIM32]; /* bitfield, opaque */ @@ -9806,15 +9806,15 @@ static void gent_bitnopaquefields(void) uint64_t buf4[F80_DIM32]; /* bitfield, opaque */ s_t buf5[F80_DIM32]; /* compound */ - file = H5Fcreate(FILE80, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); + file_id = H5Fcreate(FILE80, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); - if ((grp = H5Gcreate2(file, "bittypetests", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) >= 0) { + if ((grp = H5Gcreate2(file_id, "bittypetests", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) >= 0) { /* bitfield_1 */ if ((type = H5Tcopy(H5T_STD_B8LE)) >= 0) { if ((space = H5Screate_simple(1, &nelmts, NULL)) >= 0) { if ((dset = H5Dcreate2(grp, "bitfield_1", type, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) >= 0) { for (i = 0; i < nelmts; i++) { - buf[i] = (uint8_t)0xff ^ (uint8_t)i; + buf[i] = (uint8_t)(0xff ^ i); } H5Dwrite(dset, type, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf); H5Dclose(dset); @@ -9829,7 +9829,7 @@ static void gent_bitnopaquefields(void) if ((space = H5Screate_simple(1, &nelmts, NULL)) >= 0) { if ((dset = H5Dcreate2(grp, "bitfield_2", type, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) >= 0) { for (i = 0; i < nelmts; i++) { - buf2[i] = (uint16_t)0xffff ^ (uint16_t)(i * 16); + buf2[i] = (uint16_t)(0xffff ^ (i * 16)); } H5Dwrite(dset, type, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf2); H5Dclose(dset); @@ -9872,14 +9872,14 @@ static void gent_bitnopaquefields(void) H5Gclose(grp); } - if ((grp = H5Gcreate2(file, "opaquetypetests", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) >= 0) { + if ((grp = H5Gcreate2(file_id, "opaquetypetests", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) >= 0) { /* opaque_1 */ if ((type = H5Tcreate(H5T_OPAQUE, 1)) >= 0) { if ((H5Tset_tag(type, "1-byte opaque type")) >= 0) { if ((space = H5Screate_simple(1, &nelmts, NULL)) >= 0) { if ((dset = H5Dcreate2(grp, "opaque_1", type, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) >= 0) { for(i = 0; i < nelmts; i++) - buf[i] = (uint8_t)0xff ^ (uint8_t)i; + H5_CHECKED_ASSIGN(buf[i], uint8_t, 0xff ^ i, size_t); H5Dwrite(dset, type, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf); H5Dclose(dset); } @@ -9895,7 +9895,7 @@ static void gent_bitnopaquefields(void) if ((space = H5Screate_simple(1, &nelmts, NULL)) >= 0) { if ((dset = H5Dcreate2(grp, "opaque_2", type, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) >= 0) { for(i = 0; i < nelmts; i++) - buf2[i] = (uint16_t)0xffff ^ (uint16_t)(i * 16); + H5_CHECKED_ASSIGN(buf2[i], uint16_t, 0xffff ^ (i * 16), size_t); H5Dwrite(dset, type, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf2); H5Dclose(dset); @@ -9908,7 +9908,7 @@ static void gent_bitnopaquefields(void) H5Gclose(grp); } - if ((grp = H5Gcreate2(file, "cmpdtypetests", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) >= 0) { + if ((grp = H5Gcreate2(file_id, "cmpdtypetests", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) >= 0) { /* compound_1 */ if ((type = H5Tcreate(H5T_COMPOUND, sizeof(s_t))) >= 0) { H5Tinsert(type, "a", HOFFSET(s_t, a), H5T_STD_B8LE); @@ -9918,8 +9918,8 @@ static void gent_bitnopaquefields(void) if ((space = H5Screate_simple(1, &nelmts, NULL)) >= 0) { if ((dset = H5Dcreate2(grp, "compound_1", type, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) >= 0) { for(i = 0; i < nelmts; i++) { - buf5[i].a = (uint8_t)0xff ^ (uint8_t)i; - buf5[i].b = (uint16_t)0xffff ^ (uint16_t)(i * 16); + H5_CHECKED_ASSIGN(buf5[i].a, uint8_t, 0xff ^ i, size_t); + H5_CHECKED_ASSIGN(buf5[i].b, uint16_t, 0xffff ^ (i * 16), size_t); buf5[i].c = (uint32_t)0xffffffff ^ (uint32_t)(i * 32); buf5[i].d = (uint64_t)0xffffffffffffffff ^ (uint64_t)(i * 64); } @@ -9934,7 +9934,7 @@ static void gent_bitnopaquefields(void) H5Gclose(grp); } - H5Fclose(file); + H5Fclose(file_id); } /*------------------------------------------------------------------------- @@ -10033,9 +10033,9 @@ static void gent_compound_complex2(void) compound *buf; /* compound */ - hid_t file, type=-1, space=-1, dset=-1; + hid_t file, type=H5I_INVALID_HID, space=H5I_INVALID_HID, dset=H5I_INVALID_HID; hid_t dset_array_a, dset_array_b, dset_array_c; - hid_t cmpd_tid1 = -1, cmpd_tid2 = -1, cmpd_tid3 = -1; + hid_t cmpd_tid1 = H5I_INVALID_HID, cmpd_tid2 = H5I_INVALID_HID, cmpd_tid3 = H5I_INVALID_HID; size_t i; size_t j, k; unsigned dset_array_ndims; @@ -10321,7 +10321,7 @@ static void gent_vlenstr_array(void) }; const char *buffer[F83_DIM*F83_ARRAYDIM]; - hid_t file, type=-1, space=-1, dset=-1; + hid_t file, type=H5I_INVALID_HID, space=H5I_INVALID_HID, dset=H5I_INVALID_HID; hid_t cmpd_tid1, array_tid; int i, j; @@ -10488,7 +10488,7 @@ H5Z_filter_dynlibud(unsigned int flags, size_t cd_nelmts, /* Subtract the original value with MULTIPLIER */ while(buf_left > 0) { char temp = *int_ptr; - *int_ptr = temp - MULTIPLIER; + *int_ptr = (int8_t)(temp - MULTIPLIER); int_ptr++; buf_left -= sizeof(*int_ptr); } /* end while */ @@ -10497,7 +10497,7 @@ H5Z_filter_dynlibud(unsigned int flags, size_t cd_nelmts, /* Add the original value with MULTIPLIER */ while(buf_left > 0) { char temp = *int_ptr; - *int_ptr = temp + MULTIPLIER; + *int_ptr = (int8_t)(temp + MULTIPLIER); int_ptr++; buf_left -= sizeof(*int_ptr); } /* end while */ @@ -10564,10 +10564,10 @@ static void gent_null_space_group(void) static void gent_err_attr_dspace(void) { - hid_t fid = -1; /* File identifier */ - hid_t fcpl = -1; /* File access property list */ - hid_t sid = -1; /* Dataspace identifier */ - hid_t aid = -1; /* Attribute identifier */ + hid_t fid = H5I_INVALID_HID; /* File identifier */ + hid_t fcpl = H5I_INVALID_HID; /* File access property list */ + hid_t sid = H5I_INVALID_HID; /* Dataspace identifier */ + hid_t aid = H5I_INVALID_HID; /* Attribute identifier */ hsize_t dims = 2; /* Dimensino size */ int wdata[2] = {7, 42}; /* The buffer to write */ int fd = -1; /* The file descriptor */ diff --git a/tools/test/h5dump/testh5dump.sh.in b/tools/test/h5dump/testh5dump.sh.in index dc7d999..53c8927 100644 --- a/tools/test/h5dump/testh5dump.sh.in +++ b/tools/test/h5dump/testh5dump.sh.in @@ -941,6 +941,42 @@ GREPTEST() fi } +# Call the h5dump tool and grep for a value but disables plugin filter loading +# txttype ERRTXT greps test error output, otherwise greps test output +GREPTEST2() +{ + txttype=$1 + expectdata=$2 + actual=$TESTDIR/$3 + actual_err="$TESTDIR/`basename $3 .ddl`.oerr" + shift + shift + shift + + # Run test. + TESTING $DUMPER -p $@ + ( + cd $TESTDIR + $ENVCMD $RUNSERIAL $DUMPER_BIN -p "$@" + ) >$actual 2>$actual_err + if [ "$txttype" = "ERRTXT" ]; then + $GREP "$expectdata" $actual_err > /dev/null + else + $GREP "$expectdata" $actual > /dev/null + fi + if [ $? -eq 0 ]; then + echo " PASSED" + else + echo " FAILED" + nerrors="`expr $nerrors + 1`" + fi + + # Clean up output file + if test -z "$HDF5_NOCLEANUP"; then + rm -f $actual $actual_err + fi +} + # Print a "SKIP" message SKIP() { TESTING $DUMPER $@ @@ -1390,7 +1426,7 @@ TOOLTEST4 textlinkfar.ddl --enable-error-stack textlinkfar.h5 TOOLTEST4 textlink.ddl --enable-error-stack textlink.h5 # test for error stack display (BZ2048) -TOOLTEST5 filter_fail.ddl --enable-error-stack filter_fail.h5 +GREPTEST2 ERRTXT "filter plugins disabled" filter_fail.ddl --enable-error-stack filter_fail.h5 # test for -o -y for dataset with attributes TOOLTEST2 tall-6.exp --enable-error-stack -y -o tall-6.txt -d /g1/g1.1/dset1.1.1 tall.h5 diff --git a/tools/test/h5format_convert/h5fc_chk_idx.c b/tools/test/h5format_convert/h5fc_chk_idx.c index 8369668..ad1742b 100644 --- a/tools/test/h5format_convert/h5fc_chk_idx.c +++ b/tools/test/h5format_convert/h5fc_chk_idx.c @@ -45,8 +45,8 @@ main(int argc, char *argv[]) { char *fname = NULL; char *dname = NULL; - hid_t fid = -1; - hid_t did = -1; + hid_t fid = H5I_INVALID_HID; + hid_t did = H5I_INVALID_HID; H5D_chunk_index_t idx_type; /* h5fc_chk_idx fname dname */ diff --git a/tools/test/h5format_convert/h5fc_gentest.c b/tools/test/h5format_convert/h5fc_gentest.c index b482dee..1e9e2cf 100644 --- a/tools/test/h5format_convert/h5fc_gentest.c +++ b/tools/test/h5format_convert/h5fc_gentest.c @@ -77,12 +77,12 @@ const char *FILENAME[] = { static void gen_non(const char *fname) { - hid_t fid = -1; /* file id */ - hid_t fcpl = -1; /* file creation property list */ - hid_t gid = -1; /* group id */ - hid_t sid = -1; /* space id */ - hid_t dcpl = -1; /* dataset creation property id */ - hid_t did1 = -1, did2 = -1; /* dataset id */ + hid_t fid = H5I_INVALID_HID; /* file id */ + hid_t fcpl = H5I_INVALID_HID; /* file creation property list */ + hid_t gid = H5I_INVALID_HID; /* group id */ + hid_t sid = H5I_INVALID_HID; /* space id */ + hid_t dcpl = H5I_INVALID_HID; /* dataset creation property id */ + hid_t did1 = -1, did2 = H5I_INVALID_HID; /* dataset id */ hsize_t dims1[1] = {10}; /* dataset dimension */ hsize_t dims2[2] = {4, 6}; /* dataset dimension */ hsize_t max_dims[2]; /* maximum dataset dimension */ @@ -307,11 +307,11 @@ error: static void gen_edge(const char *fname) { - hid_t fid = -1; /* file id */ - hid_t fapl = -1; /* file access property list */ - hid_t sid = -1; /* dataspace id */ - hid_t dcpl = -1; /* dataset creation property id */ - hid_t did = -1; /* dataset id */ + hid_t fid = H5I_INVALID_HID; /* file id */ + hid_t fapl = H5I_INVALID_HID; /* file access property list */ + hid_t sid = H5I_INVALID_HID; /* dataspace id */ + hid_t dcpl = H5I_INVALID_HID; /* dataset creation property id */ + hid_t did = H5I_INVALID_HID; /* dataset id */ hsize_t dims2[2] = {12, 6}; /* Dataset dimensions */ hsize_t c_dims[2] = {5, 5}; /* Chunk dimensions */ float buf[12][6]; /* Buffer for writing data */ @@ -395,14 +395,14 @@ error: static void gen_err_level(const char *fname) { - hid_t fid = -1; /* file ID */ - hid_t fapl = -1; /* file access property list */ - hid_t fcpl = -1; /* file creation property list */ - hid_t sid = -1; /* dataspace id */ - hid_t dcpl = -1; /* dataset creation property list */ - hid_t did = -1; /* dataset ID */ - hid_t fsid = -1; /* file dataspace ID */ - hid_t msid = -1; /* memory dataspace ID */ + hid_t fid = H5I_INVALID_HID; /* file ID */ + hid_t fapl = H5I_INVALID_HID; /* file access property list */ + hid_t fcpl = H5I_INVALID_HID; /* file creation property list */ + hid_t sid = H5I_INVALID_HID; /* dataspace id */ + hid_t dcpl = H5I_INVALID_HID; /* dataset creation property list */ + hid_t did = H5I_INVALID_HID; /* dataset ID */ + hid_t fsid = H5I_INVALID_HID; /* file dataspace ID */ + hid_t msid = H5I_INVALID_HID; /* memory dataspace ID */ unsigned char *buf = NULL; /* buffer for data */ hsize_t dims[2] = {0, 1}; /* dataset dimension sizes */ hsize_t max_dims[2] = {1, H5S_UNLIMITED}; /* dataset maximum dimension sizes */ @@ -534,13 +534,13 @@ error: static void gen_ext(const char *fname, unsigned new_format, unsigned what) { - hid_t fid = -1; /* file id */ - hid_t fapl = -1; /* file access property list */ - hid_t fcpl = -1; /* file creation property list */ - hid_t gid = -1; /* group id */ - hid_t sid = -1; /* space id */ - hid_t dcpl = -1; /* dataset creation property id */ - hid_t did1 = -1, did2 = -1; /* dataset id */ + hid_t fid = H5I_INVALID_HID; /* file id */ + hid_t fapl = H5I_INVALID_HID; /* file access property list */ + hid_t fcpl = H5I_INVALID_HID; /* file creation property list */ + hid_t gid = H5I_INVALID_HID; /* group id */ + hid_t sid = H5I_INVALID_HID; /* space id */ + hid_t dcpl = H5I_INVALID_HID; /* dataset creation property id */ + hid_t did1 = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* dataset id */ hsize_t dims1[1] = {10}; /* dataset dimension */ hsize_t dims2[2] = {4, 6}; /* dataset dimension */ hsize_t max_dims[2]; /* maximum dataset dimension */ diff --git a/tools/test/h5jam/getub.c b/tools/test/h5jam/getub.c index 26a427d..f496a7a 100644 --- a/tools/test/h5jam/getub.c +++ b/tools/test/h5jam/getub.c @@ -81,7 +81,7 @@ parse_command_line(int argc, const char *argv[]) int main(int argc, const char *argv[]) { - int fd = -1; + int fd = H5I_INVALID_HID; unsigned size; char *filename = NULL; long res; diff --git a/tools/test/h5repack/h5repacktst.c b/tools/test/h5repack/h5repacktst.c index f3e6cd3..f32e87c 100644 --- a/tools/test/h5repack/h5repacktst.c +++ b/tools/test/h5repack/h5repacktst.c @@ -1779,9 +1779,9 @@ error: static int make_testfiles(void) { - hid_t fid = -1; - hid_t fcpl = -1; /* File creation property list */ - hid_t fapl = -1; /* File access property list */ + hid_t fid = H5I_INVALID_HID; + hid_t fcpl = H5I_INVALID_HID; /* File creation property list */ + hid_t fapl = H5I_INVALID_HID; /* File access property list */ unsigned j; /* Local index variable */ /*------------------------------------------------------------------------- @@ -2210,12 +2210,12 @@ out: static int make_all_objects(hid_t loc_id) { - hid_t did = -1; - hid_t gid = -1; - hid_t tid = -1; - hid_t rid = -1; - hid_t sid = -1; - hid_t gcplid = -1; + hid_t did = H5I_INVALID_HID; + hid_t gid = H5I_INVALID_HID; + hid_t tid = H5I_INVALID_HID; + hid_t rid = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; + hid_t gcplid = H5I_INVALID_HID; hsize_t dims[1] = {2}; /* compound datatype */ typedef struct s_t @@ -2332,10 +2332,10 @@ out: static int make_attributes(hid_t loc_id) { - hid_t did = -1; - hid_t gid = -1; - hid_t rid = -1; - hid_t sid = -1; + hid_t did = H5I_INVALID_HID; + hid_t gid = H5I_INVALID_HID; + hid_t rid = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; hsize_t dims[1] = {2}; /*------------------------------------------------------------------------- @@ -2403,8 +2403,8 @@ static int make_hlinks(hid_t loc_id) { hid_t g1id =- 1; - hid_t g2id = -1; - hid_t g3id = -1; + hid_t g2id = H5I_INVALID_HID; + hid_t g3id = H5I_INVALID_HID; hsize_t dims[2] = {3,2}; int buf[3][2] = {{1,1}, {1,2}, {2,2}}; @@ -2473,8 +2473,8 @@ out: static int make_szip(hid_t loc_id) { - hid_t dcpl = -1; /* dataset creation property list */ - hid_t sid = -1; /* dataspace ID */ + hid_t dcpl = H5I_INVALID_HID; /* dataset creation property list */ + hid_t sid = H5I_INVALID_HID; /* dataspace ID */ unsigned szip_options_mask = H5_SZIP_ALLOW_K13_OPTION_MASK | H5_SZIP_NN_OPTION_MASK; unsigned szip_pixels_per_block = 8; hsize_t dims[RANK] = {DIM1, DIM2}; @@ -2544,8 +2544,8 @@ out: static int make_deflate(hid_t loc_id) { - hid_t dcpl = -1; /* dataset creation property list */ - hid_t sid = -1; /* dataspace ID */ + hid_t dcpl = H5I_INVALID_HID; /* dataset creation property list */ + hid_t sid = H5I_INVALID_HID; /* dataspace ID */ hsize_t dims[RANK] = {DIM1,DIM2}; hsize_t chunk_dims[RANK] = {CDIM1,CDIM2}; int buf[DIM1][DIM2]; @@ -2684,8 +2684,8 @@ out: static int make_fletcher32(hid_t loc_id) { - hid_t dcpl = -1; /* dataset creation property list */ - hid_t sid = -1; /* dataspace ID */ + hid_t dcpl = H5I_INVALID_HID; /* dataset creation property list */ + hid_t sid = H5I_INVALID_HID; /* dataspace ID */ hsize_t dims[RANK]={DIM1,DIM2}; hsize_t chunk_dims[RANK]={CDIM1,CDIM2}; int buf[DIM1][DIM2]; @@ -2751,10 +2751,10 @@ out: static int make_nbit(hid_t loc_id) { - hid_t dcpl = -1; /* dataset creation property list */ - hid_t sid = -1; /* dataspace ID */ - hid_t dtid = -1; - hid_t dsid = -1; + hid_t dcpl = H5I_INVALID_HID; /* dataset creation property list */ + hid_t sid = H5I_INVALID_HID; /* dataspace ID */ + hid_t dtid = H5I_INVALID_HID; + hid_t dsid = H5I_INVALID_HID; hsize_t dims[RANK]={DIM1,DIM2}; hsize_t chunk_dims[RANK]={CDIM1,CDIM2}; int buf[DIM1][DIM2]; @@ -2832,10 +2832,10 @@ out: static int make_scaleoffset(hid_t loc_id) { - hid_t dcpl = -1; /* dataset creation property list */ - hid_t sid = -1; /* dataspace ID */ - hid_t dtid = -1; - hid_t dsid = -1; + hid_t dcpl = H5I_INVALID_HID; /* dataset creation property list */ + hid_t sid = H5I_INVALID_HID; /* dataspace ID */ + hid_t dtid = H5I_INVALID_HID; + hid_t dsid = H5I_INVALID_HID; hsize_t dims[RANK] = {DIM1,DIM2}; hsize_t chunk_dims[RANK] = {CDIM1,CDIM2}; int buf[DIM1][DIM2]; @@ -3077,11 +3077,11 @@ int make_early(void) { hsize_t dims[1] ={3000}; hsize_t cdims[1]={30}; - hid_t fid=-1; - hid_t did=-1; - hid_t sid=-1; - hid_t tid=-1; - hid_t dcpl=-1; + hid_t fid=H5I_INVALID_HID; + hid_t did=H5I_INVALID_HID; + hid_t sid=H5I_INVALID_HID; + hid_t tid=H5I_INVALID_HID; + hid_t dcpl=H5I_INVALID_HID; int i; char name[16]; int iter=100; @@ -3172,8 +3172,8 @@ out: static int make_layout(hid_t loc_id) { - hid_t dcpl=-1; /* dataset creation property list */ - hid_t sid=-1; /* dataspace ID */ + hid_t dcpl=H5I_INVALID_HID; /* dataset creation property list */ + hid_t sid=H5I_INVALID_HID; /* dataspace ID */ hsize_t dims[RANK]={DIM1,DIM2}; hsize_t chunk_dims[RANK]={CDIM1,CDIM2}; int buf[DIM1][DIM2]; @@ -3286,12 +3286,12 @@ static int make_layout2(hid_t loc_id) { - hid_t contig_dcpl = -1; /* dataset creation property list */ - hid_t chunked_dcpl = -1; /* dataset creation property list */ + hid_t contig_dcpl = H5I_INVALID_HID; /* dataset creation property list */ + hid_t chunked_dcpl = H5I_INVALID_HID; /* dataset creation property list */ int i, j, n; /* Local index variables */ int ret_value = -1; /* Return value */ - hid_t s_sid = -1; /* dataspace ID */ + hid_t s_sid = H5I_INVALID_HID; /* dataspace ID */ hsize_t s_dims[RANK] = {S_DIM1,S_DIM2}; /* Dataspace (< 1 k) */ hsize_t chunk_dims[RANK] = {S_DIM1/2, S_DIM2/2}; /* Dimension sizes for chunks */ @@ -3361,11 +3361,11 @@ out: static int make_layout3(hid_t loc_id) { - hid_t dcpl1=-1; /* dataset creation property list */ - hid_t dcpl2=-1; /* dataset creation property list */ - hid_t dcpl3=-1; /* dataset creation property list */ - hid_t sid1=-1; /* dataspace ID */ - hid_t sid2=-1; /* dataspace ID */ + hid_t dcpl1=H5I_INVALID_HID; /* dataset creation property list */ + hid_t dcpl2=H5I_INVALID_HID; /* dataset creation property list */ + hid_t dcpl3=H5I_INVALID_HID; /* dataset creation property list */ + hid_t sid1=H5I_INVALID_HID; /* dataspace ID */ + hid_t sid2=H5I_INVALID_HID; /* dataspace ID */ hsize_t dims1[RANK]={DIM1_L3,DIM2_L3}; hsize_t dims2[RANK]={SDIM1_L3,SDIM2_L3}; hsize_t maxdims[RANK]={H5S_UNLIMITED, H5S_UNLIMITED}; @@ -3494,8 +3494,8 @@ out: static int make_fill(hid_t loc_id) { - hid_t did=-1; - hid_t sid=-1; + hid_t did=H5I_INVALID_HID; + hid_t sid=H5I_INVALID_HID; hid_t dcpl; hsize_t dims[2]={3,2}; int buf[3][2]= {{1,1},{1,2},{2,2}}; @@ -3547,9 +3547,9 @@ out: static int make_big(hid_t loc_id) { - hid_t did=-1; - hid_t f_sid=-1; - hid_t m_sid=-1; + hid_t did=H5I_INVALID_HID; + hid_t f_sid=H5I_INVALID_HID; + hid_t m_sid=H5I_INVALID_HID; hid_t tid; hid_t dcpl; hsize_t dims[1]={ H5TOOLS_MALLOCSIZE + 1}; /* dataset dimensions */ @@ -3628,8 +3628,8 @@ out: static int make_external(hid_t loc_id) { - hid_t did=-1; - hid_t sid=-1; + hid_t did=H5I_INVALID_HID; + hid_t sid=H5I_INVALID_HID; hid_t dcpl; int buf[2]={1,2}; hsize_t cur_size[1]; /* data space current size */ @@ -3682,8 +3682,8 @@ out: static int make_userblock(void) { - hid_t fid = -1; - hid_t fcpl = -1; + hid_t fid = H5I_INVALID_HID; + hid_t fcpl = H5I_INVALID_HID; int fd = -1; /* File descriptor for writing userblock */ char ub[USERBLOCK_SIZE]; /* User block data */ ssize_t nwritten; /* # of bytes written */ @@ -3744,8 +3744,8 @@ out: static int verify_userblock( const char* filename) { - hid_t fid = -1; - hid_t fcpl = -1; + hid_t fid = H5I_INVALID_HID; + hid_t fcpl = H5I_INVALID_HID; int fd = -1; /* File descriptor for writing userblock */ char ub[USERBLOCK_SIZE]; /* User block data */ hsize_t ub_size = 0; /* User block size */ @@ -3874,10 +3874,10 @@ int write_dset_in(hid_t loc_id, GREEN } e_t; - hid_t did=-1; - hid_t sid=-1; - hid_t tid=-1; - hid_t pid=-1; + hid_t did=H5I_INVALID_HID; + hid_t sid=H5I_INVALID_HID; + hid_t tid=H5I_INVALID_HID; + hid_t pid=H5I_INVALID_HID; unsigned i, j; int val, k, n; float f; @@ -4620,10 +4620,10 @@ out: static int make_dset_reg_ref(hid_t loc_id) { - hid_t did1=-1; /* Dataset ID */ - hid_t did2=-1; /* Dereferenced dataset ID */ - hid_t sid1=-1; /* Dataspace ID #1 */ - hid_t sid2=-1; /* Dataspace ID #2 */ + hid_t did1=H5I_INVALID_HID; /* Dataset ID */ + hid_t did2=H5I_INVALID_HID; /* Dereferenced dataset ID */ + hid_t sid1=H5I_INVALID_HID; /* Dataspace ID #1 */ + hid_t sid2=H5I_INVALID_HID; /* Dataspace ID #2 */ hsize_t dims1[] = {SPACE1_DIM1}; hsize_t dims2[] = {SPACE2_DIM1, SPACE2_DIM2}; hsize_t start[SPACE2_RANK]; /* Starting location of hyperslab */ @@ -4739,9 +4739,9 @@ int write_attr_in(hid_t loc_id, GREEN } e_t; - hid_t aid = -1; - hid_t sid = -1; - hid_t tid = -1; + hid_t aid = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; + hid_t tid = H5I_INVALID_HID; int val, j, k, n; unsigned i; float f; @@ -4824,7 +4824,7 @@ int write_attr_in(hid_t loc_id, goto out; if (H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * H5T_BITFIELD @@ -4854,7 +4854,7 @@ int write_attr_in(hid_t loc_id, goto out; if (H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * H5T_OPAQUE @@ -4881,7 +4881,7 @@ int write_attr_in(hid_t loc_id, goto out; if (H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * H5T_COMPOUND @@ -4919,7 +4919,7 @@ int write_attr_in(hid_t loc_id, goto out; if (H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * H5T_REFERENCE @@ -4968,7 +4968,7 @@ int write_attr_in(hid_t loc_id, goto out; if (H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * H5T_VLEN @@ -5013,13 +5013,13 @@ int write_attr_in(hid_t loc_id, goto out; if (H5Aclose(aid) < 0) goto out; - aid = -1; + aid = H5I_INVALID_HID; if (H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; if (H5Sclose(sid) < 0) goto out; - sid = -1; + sid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * H5T_ARRAY @@ -5054,7 +5054,7 @@ int write_attr_in(hid_t loc_id, goto out; if (H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * H5T_INTEGER and H5T_FLOAT @@ -5132,7 +5132,7 @@ int write_attr_in(hid_t loc_id, goto out; if (H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * H5T_BITFIELD @@ -5165,7 +5165,7 @@ int write_attr_in(hid_t loc_id, goto out; if (H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * H5T_OPAQUE @@ -5193,7 +5193,7 @@ int write_attr_in(hid_t loc_id, goto out; if (H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * H5T_COMPOUND @@ -5229,7 +5229,7 @@ int write_attr_in(hid_t loc_id, goto out; if (H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * H5T_REFERENCE @@ -5284,7 +5284,7 @@ int write_attr_in(hid_t loc_id, goto out; if (H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * H5T_VLEN @@ -5335,13 +5335,13 @@ int write_attr_in(hid_t loc_id, goto out; if (H5Aclose(aid) < 0) goto out; - aid = -1; + aid = H5I_INVALID_HID; if (H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; if (H5Sclose(sid) < 0) goto out; - sid = -1; + sid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * H5T_ARRAY @@ -5384,7 +5384,7 @@ int write_attr_in(hid_t loc_id, goto out; if (H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * H5T_INTEGER and H5T_FLOAT @@ -5504,7 +5504,7 @@ int write_attr_in(hid_t loc_id, goto out; if (H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * H5T_BITFIELD @@ -5558,7 +5558,7 @@ int write_attr_in(hid_t loc_id, goto out; if (H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * H5T_OPAQUE @@ -5572,7 +5572,7 @@ int write_attr_in(hid_t loc_id, goto out; if (H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * H5T_COMPOUND @@ -5658,7 +5658,7 @@ int write_attr_in(hid_t loc_id, goto out; if (H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * H5T_REFERENCE @@ -5743,7 +5743,7 @@ int write_attr_in(hid_t loc_id, goto out; if (H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * H5T_VLEN @@ -5797,13 +5797,13 @@ int write_attr_in(hid_t loc_id, goto out; if (H5Aclose(aid) < 0) goto out; - aid = -1; + aid = H5I_INVALID_HID; if (H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; if (H5Sclose(sid) < 0) goto out; - sid = -1; + sid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * H5T_ARRAY @@ -5837,7 +5837,7 @@ int write_attr_in(hid_t loc_id, goto out; if (H5Tclose(tid) < 0) goto out; - tid = -1; + tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * H5T_INTEGER and H5T_FLOAT @@ -5917,7 +5917,7 @@ int make_dset(hid_t loc_id, hid_t dcpl, void *buf) { - hid_t did=-1; + hid_t did=H5I_INVALID_HID; if ((did = H5Dcreate2(loc_id, name, H5T_NATIVE_INT, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0) return -1; @@ -5954,8 +5954,8 @@ int write_dset( hid_t loc_id, hid_t tid, void *buf ) { - hid_t did=-1; - hid_t sid=-1; + hid_t did=H5I_INVALID_HID; + hid_t sid=H5I_INVALID_HID; if ((sid = H5Screate_simple(rank, dims, NULL)) < 0) return -1; @@ -6040,11 +6040,11 @@ static int make_named_dtype(hid_t loc_id) { hsize_t dims[1] ={3}; - hid_t did=-1; - hid_t aid=-1; - hid_t sid=-1; - hid_t tid=-1; - hid_t gid=-1; + hid_t did=H5I_INVALID_HID; + hid_t aid=H5I_INVALID_HID; + hid_t sid=H5I_INVALID_HID; + hid_t tid=H5I_INVALID_HID; + hid_t gid=H5I_INVALID_HID; if ((sid = H5Screate_simple(1, dims, NULL)) < 0) goto out; diff --git a/tools/test/h5repack/testfiles/h5repack_layout.h5-dset2_chunk_20x10-errstk.tst b/tools/test/h5repack/testfiles/h5repack_layout.h5-dset2_chunk_20x10-errstk.tst index 4e69148..9e83ff8 100644 --- a/tools/test/h5repack/testfiles/h5repack_layout.h5-dset2_chunk_20x10-errstk.tst +++ b/tools/test/h5repack/testfiles/h5repack_layout.h5-dset2_chunk_20x10-errstk.tst @@ -44,4 +44,4 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): #000: (file name) line (number) in do_copy_objects(): H5Dcreate2 failed major: Failure in tools library - minor: error in function + minor: function info diff --git a/tools/test/h5stat/h5stat_gentest.c b/tools/test/h5stat/h5stat_gentest.c index 2edfcf6..0bf1001 100644 --- a/tools/test/h5stat/h5stat_gentest.c +++ b/tools/test/h5stat/h5stat_gentest.c @@ -54,14 +54,14 @@ static void gen_newgrat_file(const char *fname) { - hid_t fcpl = -1; /* File creation property */ - hid_t fapl = -1; /* File access property */ - hid_t fid = -1; /* File id */ - hid_t gid = -1; /* Group id */ - hid_t tid = -1; /* Datatype id */ - hid_t sid = -1; /* Dataspace id */ - hid_t attr_id = -1; /* Attribute id */ - hid_t did = -1; /* Dataset id */ + hid_t fcpl = H5I_INVALID_HID; /* File creation property */ + hid_t fapl = H5I_INVALID_HID; /* File access property */ + hid_t fid = H5I_INVALID_HID; /* File id */ + hid_t gid = H5I_INVALID_HID; /* Group id */ + hid_t tid = H5I_INVALID_HID; /* Datatype id */ + hid_t sid = H5I_INVALID_HID; /* Dataspace id */ + hid_t attr_id = H5I_INVALID_HID; /* Attribute id */ + hid_t did = H5I_INVALID_HID; /* Dataset id */ char name[30]; /* Group name */ char attrname[30]; /* Attribute name */ int i; /* Local index variable */ @@ -139,15 +139,15 @@ error: static void gen_threshold_file(const char *fname) { - hid_t fid = -1; /* File ID */ - hid_t sid0 = -1; /* Dataspace IDs */ - hid_t sid1 = -1; /* Dataspace IDs */ - hid_t sid2 = -1; /* Dataspace IDs */ - hid_t sid3 = -1; /* Dataspace IDs */ - hid_t sid4 = -1; /* Dataspace IDs */ - hid_t did = -1; /* Dataset ID */ - hid_t attr_id = -1; /* Attribute ID */ - hid_t gid = -1; /* Group ID */ + hid_t fid = H5I_INVALID_HID; /* File ID */ + hid_t sid0 = H5I_INVALID_HID; /* Dataspace IDs */ + hid_t sid1 = H5I_INVALID_HID; /* Dataspace IDs */ + hid_t sid2 = H5I_INVALID_HID; /* Dataspace IDs */ + hid_t sid3 = H5I_INVALID_HID; /* Dataspace IDs */ + hid_t sid4 = H5I_INVALID_HID; /* Dataspace IDs */ + hid_t did = H5I_INVALID_HID; /* Dataset ID */ + hid_t attr_id = H5I_INVALID_HID; /* Attribute ID */ + hid_t gid = H5I_INVALID_HID; /* Group ID */ hsize_t two_dims[] = {2, 5}; /* Dimension array */ hsize_t one_dims[] = {6}; /* Dimension array */ hsize_t zero_dims[] = {0}; /* Dimension array */ @@ -323,11 +323,11 @@ error: static void gen_idx_file(const char *fname) { - hid_t fapl = -1; /* file access property id */ - hid_t fid = -1; /* file id */ - hid_t sid = -1; /* space id */ - hid_t dcpl = -1; /* dataset creation property id */ - hid_t did = -1, did2 = -1; /* dataset id */ + hid_t fapl = H5I_INVALID_HID; /* file access property id */ + hid_t fid = H5I_INVALID_HID; /* file id */ + hid_t sid = H5I_INVALID_HID; /* space id */ + hid_t dcpl = H5I_INVALID_HID; /* dataset creation property id */ + hid_t did = -1, did2 = H5I_INVALID_HID; /* dataset id */ hsize_t dims[1] = {10}; /* dataset dimension */ hsize_t c_dims[1] = {2}; /* chunk dimension */ int i; /* local index variable */ @@ -413,12 +413,12 @@ error: static void gen_err_refcount(const char *fname) { - hid_t fid = -1; /* File identifier */ - hid_t sid = -1; /* Dataspace message */ - hid_t did = -1; /* Dataset identifier */ - hid_t gid = -1; /* Group identifier */ - hid_t aid1 = -1, aid2 = -1; /* Attribute identifier */ - hid_t tid = -1; /* Datatype identifier */ + hid_t fid = H5I_INVALID_HID; /* File identifier */ + hid_t sid = H5I_INVALID_HID; /* Dataspace message */ + hid_t did = H5I_INVALID_HID; /* Dataset identifier */ + hid_t gid = H5I_INVALID_HID; /* Group identifier */ + hid_t aid1 = -1, aid2 = H5I_INVALID_HID; /* Attribute identifier */ + hid_t tid = H5I_INVALID_HID; /* Datatype identifier */ int i, n; /* Local index variables */ int buf[10]; /* Data buffer */ hsize_t dims[1]; /* Dimension size */ diff --git a/tools/test/misc/h5clear_gentest.c b/tools/test/misc/h5clear_gentest.c index 96d7e75e7..1411c21 100644 --- a/tools/test/misc/h5clear_gentest.c +++ b/tools/test/misc/h5clear_gentest.c @@ -56,10 +56,10 @@ const char *FILENAME_ENHANCE[] = { static int gen_cache_image_file(const char *fname) { - hid_t fid = -1; /* File ID */ - hid_t did = -1, sid = -1; /* Dataset ID, dataspace ID */ - hid_t fapl = -1; /* File access property list */ - hid_t dcpl = -1; /* Dataset creation property list */ + hid_t fid = H5I_INVALID_HID; /* File ID */ + hid_t did = -1, sid = H5I_INVALID_HID; /* Dataset ID, dataspace ID */ + hid_t fapl = H5I_INVALID_HID; /* File access property list */ + hid_t dcpl = H5I_INVALID_HID; /* Dataset creation property list */ hsize_t dims[2]; /* Dimension sizes */ hsize_t chunks[2]; /* Chunked dimension sizes */ int buf[50][100]; /* Buffer for data to write */ @@ -164,10 +164,10 @@ error: static int gen_enhance_files(hbool_t user) { - hid_t fid = -1; /* File ID */ - hid_t fcpl = -1; /* File creation property list */ - hid_t sid = -1; /* Dataspace ID */ - hid_t did = -1; /* Dataset ID */ + hid_t fid = H5I_INVALID_HID; /* File ID */ + hid_t fcpl = H5I_INVALID_HID; /* File creation property list */ + hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ + hid_t did = H5I_INVALID_HID; /* Dataset ID */ hsize_t dim[1]; /* Dimension sizes */ int data[NUM_ELMTS]; /* Buffer for data */ int fd = -1; /* The file descriptor ID */ @@ -361,13 +361,13 @@ error: int main(void) { - hid_t fid = -1; /* File ID */ - hid_t fcpl = -1; /* File creation property list */ - hid_t fapl = -1, new_fapl = -1; /* File access property lists */ + hid_t fid = H5I_INVALID_HID; /* File ID */ + hid_t fcpl = H5I_INVALID_HID; /* File creation property list */ + hid_t fapl = -1, new_fapl = H5I_INVALID_HID; /* File access property lists */ char fname[512]; /* File name */ unsigned new_format; /* To use latest library format or not */ - hid_t sid = -1; /* Dataspace ID */ - hid_t did = -1; /* Dataset ID */ + hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ + hid_t did = H5I_INVALID_HID; /* Dataset ID */ hsize_t dim[1]; /* Dimension sizes */ int data[NUM_ELMTS]; /* Buffer for data */ int i; /* Local index variables */ diff --git a/tools/test/misc/repart_test.c b/tools/test/misc/repart_test.c index b8e0292..7227de0 100644 --- a/tools/test/misc/repart_test.c +++ b/tools/test/misc/repart_test.c @@ -47,8 +47,8 @@ herr_t test_single_h5repart_opens(void); herr_t test_family_h5repart_opens(void) { - hid_t fid = -1; - hid_t fapl_id = -1; + hid_t fid = H5I_INVALID_HID; + hid_t fapl_id = H5I_INVALID_HID; /* open 1st file(single member file) with correct family size(20000 byte) */ if ((fapl_id = H5Pcreate(H5P_FILE_ACCESS)) < 0) @@ -102,7 +102,7 @@ error: herr_t test_single_h5repart_opens(void) { - hid_t fid = -1; + hid_t fid = H5I_INVALID_HID; /* open the single file */ if ((fid = H5Fopen(FILENAME[2], H5F_ACC_RDWR, H5P_DEFAULT)) < 0) diff --git a/tools/test/misc/talign.c b/tools/test/misc/talign.c index 7f1f038..c69d1f7 100644 --- a/tools/test/misc/talign.c +++ b/tools/test/misc/talign.c @@ -32,11 +32,11 @@ const char *setname = "align"; int main(void) { - hid_t fil=-1, spc=-1, set=-1; - hid_t cs6=-1, cmp=-1, fix=-1; - hid_t cmp1=-1, cmp2=-1, cmp3=-1; - hid_t plist=-1; - hid_t array_dt=-1; + hid_t fil=H5I_INVALID_HID, spc=H5I_INVALID_HID, set=H5I_INVALID_HID; + hid_t cs6=H5I_INVALID_HID, cmp=H5I_INVALID_HID, fix=H5I_INVALID_HID; + hid_t cmp1=H5I_INVALID_HID, cmp2=H5I_INVALID_HID, cmp3=H5I_INVALID_HID; + hid_t plist=H5I_INVALID_HID; + hid_t array_dt=H5I_INVALID_HID; hsize_t dim[2]; hsize_t cdim[4]; diff --git a/tools/test/misc/vds/UC_1_one_dim_gen.c b/tools/test/misc/vds/UC_1_one_dim_gen.c index b997280..b5ddae3 100644 --- a/tools/test/misc/vds/UC_1_one_dim_gen.c +++ b/tools/test/misc/vds/UC_1_one_dim_gen.c @@ -59,16 +59,16 @@ static int UC_1_VDS_FILL_VALUE = -9; int main(void) { - hid_t src_sid = -1; /* source dataset's dataspace ID */ - hid_t src_dcplid = -1; /* source dataset property list ID */ + hid_t src_sid = H5I_INVALID_HID; /* source dataset's dataspace ID */ + hid_t src_dcplid = H5I_INVALID_HID; /* source dataset property list ID */ - hid_t vds_sid = -1; /* VDS dataspace ID */ - hid_t vds_dcplid = -1; /* VDS dataset property list ID */ + hid_t vds_sid = H5I_INVALID_HID; /* VDS dataspace ID */ + hid_t vds_dcplid = H5I_INVALID_HID; /* VDS dataset property list ID */ - hid_t fid = -1; /* HDF5 file ID */ - hid_t did = -1; /* dataset ID */ - hid_t msid = -1; /* memory dataspace ID */ - hid_t fsid = -1; /* file dataspace ID */ + hid_t fid = H5I_INVALID_HID; /* HDF5 file ID */ + hid_t did = H5I_INVALID_HID; /* dataset ID */ + hid_t msid = H5I_INVALID_HID; /* memory dataspace ID */ + hid_t fsid = H5I_INVALID_HID; /* file dataspace ID */ hsize_t extent[RANK]; /* dataset extents */ hsize_t start[RANK]; /* starting point for hyperslab */ diff --git a/tools/test/misc/vds/UC_2_two_dims_gen.c b/tools/test/misc/vds/UC_2_two_dims_gen.c index bd70fda..8e1554b 100644 --- a/tools/test/misc/vds/UC_2_two_dims_gen.c +++ b/tools/test/misc/vds/UC_2_two_dims_gen.c @@ -68,16 +68,16 @@ static int UC_2_VDS_FILL_VALUE = -9; int main(void) { - hid_t src_sid = -1; /* source dataset's dataspace ID */ - hid_t src_dcplid = -1; /* source dataset property list ID */ + hid_t src_sid = H5I_INVALID_HID; /* source dataset's dataspace ID */ + hid_t src_dcplid = H5I_INVALID_HID; /* source dataset property list ID */ - hid_t vds_sid = -1; /* VDS dataspace ID */ - hid_t vds_dcplid = -1; /* VDS dataset property list ID */ + hid_t vds_sid = H5I_INVALID_HID; /* VDS dataspace ID */ + hid_t vds_dcplid = H5I_INVALID_HID; /* VDS dataset property list ID */ - hid_t fid = -1; /* HDF5 file ID */ - hid_t did = -1; /* dataset ID */ - hid_t msid = -1; /* memory dataspace ID */ - hid_t fsid = -1; /* file dataspace ID */ + hid_t fid = H5I_INVALID_HID; /* HDF5 file ID */ + hid_t did = H5I_INVALID_HID; /* dataset ID */ + hid_t msid = H5I_INVALID_HID; /* memory dataspace ID */ + hid_t fsid = H5I_INVALID_HID; /* file dataspace ID */ hsize_t start[RANK]; /* starting point for hyperslab */ hsize_t extent[RANK]; /* dataset extents */ diff --git a/tools/test/misc/vds/UC_3_gaps_gen.c b/tools/test/misc/vds/UC_3_gaps_gen.c index e6e7226..74a23dc 100644 --- a/tools/test/misc/vds/UC_3_gaps_gen.c +++ b/tools/test/misc/vds/UC_3_gaps_gen.c @@ -29,12 +29,12 @@ static herr_t create_3_1_vds(void) { - hid_t src_sid = -1; /* source dataset's dataspace ID */ - hid_t vds_sid = -1; /* VDS dataspace ID */ - hid_t vds_dcplid = -1; /* VDS dataset property list ID */ + hid_t src_sid = H5I_INVALID_HID; /* source dataset's dataspace ID */ + hid_t vds_sid = H5I_INVALID_HID; /* VDS dataspace ID */ + hid_t vds_dcplid = H5I_INVALID_HID; /* VDS dataset property list ID */ - hid_t fid = -1; /* HDF5 file ID */ - hid_t did = -1; /* dataset ID */ + hid_t fid = H5I_INVALID_HID; /* HDF5 file ID */ + hid_t did = H5I_INVALID_HID; /* dataset ID */ hsize_t start[RANK]; /* source starting point for hyperslab */ hsize_t position[RANK]; /* vds mapping positions */ @@ -136,12 +136,12 @@ error: static herr_t create_3_2_vds(void) { - hid_t src_sid = -1; /* source dataset's dataspace ID */ - hid_t vds_sid = -1; /* VDS dataspace ID */ - hid_t vds_dcplid = -1; /* VDS dataset property list ID */ + hid_t src_sid = H5I_INVALID_HID; /* source dataset's dataspace ID */ + hid_t vds_sid = H5I_INVALID_HID; /* VDS dataspace ID */ + hid_t vds_dcplid = H5I_INVALID_HID; /* VDS dataset property list ID */ - hid_t fid = -1; /* HDF5 file ID */ - hid_t did = -1; /* dataset ID */ + hid_t fid = H5I_INVALID_HID; /* HDF5 file ID */ + hid_t did = H5I_INVALID_HID; /* dataset ID */ hsize_t start[RANK]; /* source starting point for hyperslab */ diff --git a/tools/test/misc/vds/UC_4_printf_gen.c b/tools/test/misc/vds/UC_4_printf_gen.c index b328046..24451e9 100644 --- a/tools/test/misc/vds/UC_4_printf_gen.c +++ b/tools/test/misc/vds/UC_4_printf_gen.c @@ -27,16 +27,16 @@ int main(void) { - hid_t src_sid = -1; /* source dataset's dataspace ID */ - hid_t src_dcplid = -1; /* source dataset property list ID */ + hid_t src_sid = H5I_INVALID_HID; /* source dataset's dataspace ID */ + hid_t src_dcplid = H5I_INVALID_HID; /* source dataset property list ID */ - hid_t vds_sid = -1; /* VDS dataspace ID */ - hid_t vds_dcplid = -1; /* VDS dataset property list ID */ + hid_t vds_sid = H5I_INVALID_HID; /* VDS dataspace ID */ + hid_t vds_dcplid = H5I_INVALID_HID; /* VDS dataset property list ID */ - hid_t fid = -1; /* HDF5 file ID */ - hid_t did = -1; /* dataset ID */ - hid_t msid = -1; /* memory dataspace ID */ - hid_t fsid = -1; /* file dataspace ID */ + hid_t fid = H5I_INVALID_HID; /* HDF5 file ID */ + hid_t did = H5I_INVALID_HID; /* dataset ID */ + hid_t msid = H5I_INVALID_HID; /* memory dataspace ID */ + hid_t fsid = H5I_INVALID_HID; /* file dataspace ID */ /* Hyperslab arrays */ hsize_t start[RANK] = {0, 0, 0}; diff --git a/tools/test/misc/vds/UC_5_stride_gen.c b/tools/test/misc/vds/UC_5_stride_gen.c index a105bbd..726ce6e 100644 --- a/tools/test/misc/vds/UC_5_stride_gen.c +++ b/tools/test/misc/vds/UC_5_stride_gen.c @@ -27,16 +27,16 @@ int main(void) { - hid_t src_sid = -1; /* source dataset's dataspace ID */ - hid_t src_dcplid = -1; /* source dataset property list ID */ + hid_t src_sid = H5I_INVALID_HID; /* source dataset's dataspace ID */ + hid_t src_dcplid = H5I_INVALID_HID; /* source dataset property list ID */ - hid_t vds_sid = -1; /* VDS dataspace ID */ - hid_t vds_dcplid = -1; /* VDS dataset property list ID */ + hid_t vds_sid = H5I_INVALID_HID; /* VDS dataspace ID */ + hid_t vds_dcplid = H5I_INVALID_HID; /* VDS dataset property list ID */ - hid_t fid = -1; /* HDF5 file ID */ - hid_t did = -1; /* dataset ID */ - hid_t msid = -1; /* memory dataspace ID */ - hid_t fsid = -1; /* file dataspace ID */ + hid_t fid = H5I_INVALID_HID; /* HDF5 file ID */ + hid_t did = H5I_INVALID_HID; /* dataset ID */ + hid_t msid = H5I_INVALID_HID; /* memory dataspace ID */ + hid_t fsid = H5I_INVALID_HID; /* file dataspace ID */ hsize_t extent[RANK]; /* source dataset extents */ hsize_t start[RANK]; /* starting point for hyperslab */ diff --git a/tools/test/perform/CMakeLists.txt b/tools/test/perform/CMakeLists.txt index 38dd605..a01a88f 100644 --- a/tools/test/perform/CMakeLists.txt +++ b/tools/test/perform/CMakeLists.txt @@ -21,20 +21,21 @@ endif () set_target_properties (h5perf_serial PROPERTIES FOLDER perform) if (HDF5_BUILD_PERFORM_STANDALONE) - #-- Adding test for h5perf_serial_alone + #-- Adding test for h5perf_serial_alone - io_timer.c includes set (h5perf_serial_alone_SOURCES + ${HDF5_TOOLS_DIR}/lib/io_timer.c ${HDF5_TOOLS_TEST_PERFORM_SOURCE_DIR}/sio_perf.c ${HDF5_TOOLS_TEST_PERFORM_SOURCE_DIR}/sio_engine.c ${HDF5_TOOLS_TEST_PERFORM_SOURCE_DIR}/sio_standalone.c ) add_executable (h5perf_serial_alone ${h5perf_serial_alone_SOURCES}) - target_include_directories (h5perf_serial_alone PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") + target_include_directories (h5perf_serial_alone PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};${HDF5_TOOLS_DIR}/lib;$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") if (NOT BUILD_SHARED_LIBS) TARGET_C_PROPERTIES (h5perf_serial_alone STATIC) - target_link_libraries (h5perf_serial_alone PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET} ${HDF5_LIB_TARGET}) + target_link_libraries (h5perf_serial_alone PRIVATE ${HDF5_LIB_TARGET} "$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_LIBRARIES}>") else () TARGET_C_PROPERTIES (h5perf_serial_alone SHARED) - target_link_libraries (h5perf_serial_alone PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_TEST_LIBSH_TARGET} ${HDF5_LIBSH_TARGET}) + target_link_libraries (h5perf_serial_alone PRIVATE ${HDF5_LIBSH_TARGET} "$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_LIBRARIES}>") endif () set_target_properties (h5perf_serial_alone PROPERTIES FOLDER perform) set_property (TARGET h5perf_serial_alone @@ -169,18 +170,19 @@ if (H5_HAVE_PARALLEL AND BUILD_TESTING) if (HDF5_BUILD_PERFORM_STANDALONE) #-- Adding test for h5perf set (h5perf_alone_SOURCES + ${HDF5_TOOLS_DIR}/lib/io_timer.c ${HDF5_TOOLS_TEST_PERFORM_SOURCE_DIR}/pio_perf.c ${HDF5_TOOLS_TEST_PERFORM_SOURCE_DIR}/pio_engine.c ${HDF5_TOOLS_TEST_PERFORM_SOURCE_DIR}/pio_standalone.c ) add_executable (h5perf_alone ${h5perf_alone_SOURCES}) - target_include_directories (h5perf_alone PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") + target_include_directories (h5perf_alone PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};${HDF5_TOOLS_DIR}/lib;$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") if (NOT BUILD_SHARED_LIBS) TARGET_C_PROPERTIES (h5perf_alone STATIC) - target_link_libraries (h5perf_alone PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET} ${HDF5_LIB_TARGET}) + target_link_libraries (h5perf_alone PRIVATE ${HDF5_LIB_TARGET} "$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_LIBRARIES}>") else () TARGET_C_PROPERTIES (h5perf_alone SHARED) - target_link_libraries (h5perf_alone PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_TEST_LIBSH_TARGET} ${HDF5_LIBSH_TARGET}) + target_link_libraries (h5perf_alone PRIVATE ${HDF5_LIBSH_TARGET} "$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_LIBRARIES}>") endif () set_target_properties (h5perf_alone PROPERTIES FOLDER perform) set_property (TARGET h5perf_alone diff --git a/tools/test/perform/chunk.c b/tools/test/perform/chunk.c index 804f88e..3603c9b 100644 --- a/tools/test/perform/chunk.c +++ b/tools/test/perform/chunk.c @@ -72,7 +72,7 @@ /* #define DIAG_NRDCC 521 */ static size_t nio_g; -static hid_t fapl_g = -1; +static hid_t fapl_g = H5I_INVALID_HID; /* Local function prototypes */ static size_t diff --git a/tools/test/perform/iopipe.c b/tools/test/perform/iopipe.c index 2d9c44f..57c0d52 100644 --- a/tools/test/perform/iopipe.c +++ b/tools/test/perform/iopipe.c @@ -168,7 +168,7 @@ main (void) static unsigned nread = NREAD_REQUESTS, nwrite = NWRITE_REQUESTS; unsigned char *the_data = NULL; - hid_t file, dset, file_space = -1; + hid_t file, dset, file_space = H5I_INVALID_HID; herr_t status; #ifdef H5_HAVE_GETRUSAGE struct rusage r_start, r_stop; diff --git a/tools/test/perform/pio_engine.c b/tools/test/perform/pio_engine.c index 77c04ab..d000f60 100644 --- a/tools/test/perform/pio_engine.c +++ b/tools/test/perform/pio_engine.c @@ -208,7 +208,7 @@ do_pio(parameters param) bsize = buf_size; /* Actual buffer size */ } else { - snbytes = (off_t)sqrt(nbytes); /* General dataset size */ + snbytes = (off_t)sqrt((double)nbytes); /* General dataset size */ bsize = buf_size * blk_size; /* Actual buffer size */ } @@ -557,16 +557,16 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets, /* HDF5 variables */ herr_t hrc; /*HDF5 return code */ hsize_t h5dims[2]; /*dataset dim sizes */ - hid_t h5dset_space_id = -1; /*dataset space ID */ - hid_t h5mem_space_id = -1; /*memory dataspace ID */ - hid_t h5ds_id = -1; /*dataset handle */ + hid_t h5dset_space_id = H5I_INVALID_HID; /*dataset space ID */ + hid_t h5mem_space_id = H5I_INVALID_HID; /*memory dataspace ID */ + hid_t h5ds_id = H5I_INVALID_HID; /*dataset handle */ hsize_t h5block[2]; /*dataspace selection */ hsize_t h5stride[2]; hsize_t h5count[2]; hsize_t h5start[2]; hssize_t h5offset[2]; /* Selection offset within dataspace */ - hid_t h5dcpl = -1; /* Dataset creation property list */ - hid_t h5dxpl = -1; /* Dataset transfer property list */ + hid_t h5dcpl = H5I_INVALID_HID; /* Dataset creation property list */ + hid_t h5dxpl = H5I_INVALID_HID; /* Dataset transfer property list */ /* Get the parameters from the parameter block */ blk_size=parms->blk_size; @@ -601,7 +601,7 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets, /* nbytes is always the number of bytes per dataset (1D or 2D). If the dataspace is 2D, snbytes is the size of a side of the dataset square. */ - snbytes = (off_t)sqrt(nbytes); + snbytes = (off_t)sqrt((double)nbytes); /* Contiguous Pattern: */ if (!parms->interleaved) { @@ -1402,7 +1402,7 @@ do_write(results *res, file_descr *fd, parameters *parms, long ndsets, GOTOERROR(FAIL); } - h5ds_id = -1; + h5ds_id = H5I_INVALID_HID; } /* end if */ } /* end for */ @@ -1458,7 +1458,7 @@ done: HDfprintf(stderr, "HDF5 Dataset Space Close failed\n"); ret_code = FAIL; } else { - h5dset_space_id = -1; + h5dset_space_id = H5I_INVALID_HID; } } @@ -1468,7 +1468,7 @@ done: HDfprintf(stderr, "HDF5 Memory Space Close failed\n"); ret_code = FAIL; } else { - h5mem_space_id = -1; + h5mem_space_id = H5I_INVALID_HID; } } @@ -1478,7 +1478,7 @@ done: HDfprintf(stderr, "HDF5 Dataset Transfer Property List Close failed\n"); ret_code = FAIL; } else { - h5dxpl = -1; + h5dxpl = H5I_INVALID_HID; } } @@ -1537,15 +1537,15 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets, /* HDF5 variables */ herr_t hrc; /*HDF5 return code */ hsize_t h5dims[2]; /*dataset dim sizes */ - hid_t h5dset_space_id = -1; /*dataset space ID */ - hid_t h5mem_space_id = -1; /*memory dataspace ID */ - hid_t h5ds_id = -1; /*dataset handle */ + hid_t h5dset_space_id = H5I_INVALID_HID; /*dataset space ID */ + hid_t h5mem_space_id = H5I_INVALID_HID; /*memory dataspace ID */ + hid_t h5ds_id = H5I_INVALID_HID; /*dataset handle */ hsize_t h5block[2]; /*dataspace selection */ hsize_t h5stride[2]; hsize_t h5count[2]; hsize_t h5start[2]; hssize_t h5offset[2]; /* Selection offset within dataspace */ - hid_t h5dxpl = -1; /* Dataset transfer property list */ + hid_t h5dxpl = H5I_INVALID_HID; /* Dataset transfer property list */ /* Get the parameters from the parameter block */ blk_size=parms->blk_size; @@ -1577,7 +1577,7 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets, /* nbytes is always the number of bytes per dataset (1D or 2D). If the dataspace is 2D, snbytes is the size of a side of the 'dataset square'. */ - snbytes = (off_t)sqrt(nbytes); + snbytes = (off_t)sqrt((double)nbytes); bsize = buf_size * blk_size; @@ -2357,7 +2357,7 @@ do_read(results *res, file_descr *fd, parameters *parms, long ndsets, GOTOERROR(FAIL); } - h5ds_id = -1; + h5ds_id = H5I_INVALID_HID; } /* end if */ } /* end for */ @@ -2413,7 +2413,7 @@ done: HDfprintf(stderr, "HDF5 Dataset Space Close failed\n"); ret_code = FAIL; } else { - h5dset_space_id = -1; + h5dset_space_id = H5I_INVALID_HID; } } @@ -2423,7 +2423,7 @@ done: HDfprintf(stderr, "HDF5 Memory Space Close failed\n"); ret_code = FAIL; } else { - h5mem_space_id = -1; + h5mem_space_id = H5I_INVALID_HID; } } @@ -2433,7 +2433,7 @@ done: HDfprintf(stderr, "HDF5 Dataset Transfer Property List Close failed\n"); ret_code = FAIL; } else { - h5dxpl = -1; + h5dxpl = H5I_INVALID_HID; } } @@ -2451,7 +2451,7 @@ done: do_fopen(parameters *param, char *fname, file_descr *fd /*out*/, int flags) { int ret_code = SUCCESS, mrc; - hid_t acc_tpl = -1; /* file access templates */ + hid_t acc_tpl = H5I_INVALID_HID; /* file access templates */ switch (param->io_type) { case POSIXIO: diff --git a/tools/test/perform/pio_perf.c b/tools/test/perform/pio_perf.c index 9f4d116..5977731 100644 --- a/tools/test/perform/pio_perf.c +++ b/tools/test/perform/pio_perf.c @@ -1155,9 +1155,9 @@ report_parameters(struct options *opts) recover_size_and_print((long long)(opts->num_bpp * opts->max_num_procs), "\n"); HDfprintf(output, "rank %d: File size=", rank); - recover_size_and_print((long long)(pow(opts->num_bpp * opts->min_num_procs,2) + recover_size_and_print((long long)(pow((double)(opts->num_bpp * opts->min_num_procs),2) * opts->num_dsets), ":"); - recover_size_and_print((long long)(pow(opts->num_bpp * opts->max_num_procs,2) + recover_size_and_print((long long)(pow((double)(opts->num_bpp * opts->max_num_procs),2) * opts->num_dsets), "\n"); HDfprintf(output, "rank %d: Transfer buffer size=", rank); diff --git a/tools/test/perform/pio_perf.h b/tools/test/perform/pio_perf.h index 7605f20..55d721e 100644 --- a/tools/test/perform/pio_perf.h +++ b/tools/test/perform/pio_perf.h @@ -13,12 +13,13 @@ #ifndef PIO_PERF_H__ #define PIO_PERF_H__ -#include "io_timer.h" #ifndef STANDALONE +#include "io_timer.h" #include "h5test.h" #include "h5tools.h" #include "h5tools_utils.h" #else +#include "io_timer.h" #include "pio_standalone.h" #endif diff --git a/tools/test/perform/pio_standalone.c b/tools/test/perform/pio_standalone.c index 0fba904..8cdca85 100644 --- a/tools/test/perform/pio_standalone.c +++ b/tools/test/perform/pio_standalone.c @@ -164,3 +164,135 @@ print_version(const char *progname) progname, H5_VERS_MAJOR, H5_VERS_MINOR, H5_VERS_RELEASE, H5_VERS_SUBRELEASE[0] ? "-" : "", H5_VERS_SUBRELEASE); } + +#ifdef STANDALONE +/* + * Function: h5_set_info_object + * Purpose: Process environment variables setting to set up MPI Info + * object. + * Return: 0 if all is fine; otherwise non-zero. + * Programmer: Albert Cheng, 2002/05/21. + * Modifications: + * Bill Wendling, 2002/05/31 + * Modified so that the HDF5_MPI_INFO environment variable can + * be a semicolon separated list of "key=value" pairings. Most + * of the code is to remove any whitespaces which might be + * surrounding the "key=value" pairs. + */ +int +h5_set_info_object(void) +{ + char *envp; /* environment pointer */ + int ret_value=0; + + /* handle any MPI INFO hints via $HDF5_MPI_INFO */ + if ((envp = HDgetenv("HDF5_MPI_INFO")) != NULL){ + char *next, *valp; + + valp = envp = next = HDstrdup(envp); + + if (!valp) return 0; + + /* create an INFO object if not created yet */ + if (h5_io_info_g == MPI_INFO_NULL) + MPI_Info_create(&h5_io_info_g); + + do { + size_t len; + char *key_val, *endp, *namep; + + if (*valp == ';') + valp++; + + /* copy key/value pair into temporary buffer */ + len = strcspn(valp, ";"); + next = &valp[len]; + key_val = (char *)HDcalloc(1, len + 1); + + /* increment the next pointer past the terminating semicolon */ + if (*next == ';') + ++next; + + namep = HDstrncpy(key_val, valp, len); + + /* pass up any beginning whitespaces */ + while (*namep && (*namep == ' ' || *namep == '\t')) + namep++; + + if (!*namep) continue; /* was all white space, so move to next k/v pair */ + + /* eat up any ending white spaces */ + endp = &namep[HDstrlen(namep) - 1]; + + while (endp && (*endp == ' ' || *endp == '\t')) + *endp-- = '\0'; + + /* find the '=' */ + valp = HDstrchr(namep, '='); + + if (valp != NULL) { /* it's a valid key/value pairing */ + char *tmp_val = valp + 1; + + /* change '=' to \0, move valp down one */ + *valp-- = '\0'; + + /* eat up ending whitespace on the "key" part */ + while (*valp == ' ' || *valp == '\t') + *valp-- = '\0'; + + valp = tmp_val; + + /* eat up beginning whitespace on the "value" part */ + while (*valp == ' ' || *valp == '\t') + *valp++ = '\0'; + + /* actually set the darned thing */ + if (MPI_SUCCESS != MPI_Info_set(h5_io_info_g, namep, valp)) { + HDprintf("MPI_Info_set failed\n"); + ret_value = -1; + } + } + + valp = next; + HDfree(key_val); + } while (next && *next); + + HDfree(envp); + } + + return ret_value; +} + + +/* + * Function: h5_dump_info_object + * Purpose: Display content of an MPI Info object + * Return: void + * Programmer: Albert Cheng 2002/05/21 + * Modifications: + */ +void +h5_dump_info_object(MPI_Info info) +{ + char key[MPI_MAX_INFO_KEY+1]; + char value[MPI_MAX_INFO_VAL+1]; + int flag; + int i, nkeys; + + HDprintf("Dumping MPI Info Object (up to %d bytes per item):\n", MPI_MAX_INFO_VAL); + if (info==MPI_INFO_NULL){ + HDprintf("object is MPI_INFO_NULL\n"); + } + else { + MPI_Info_get_nkeys(info, &nkeys); + HDprintf("object has %d items\n", nkeys); + for (i=0; i<nkeys; i++){ + MPI_Info_get_nthkey(info, i, key); + MPI_Info_get(info, key, MPI_MAX_INFO_VAL, value, &flag); + HDprintf("%s=%s\n", key, value); + } + + } +} +#endif /* STANDALONE */ + diff --git a/tools/test/perform/sio_engine.c b/tools/test/perform/sio_engine.c index 4dc4d0b..69409bb 100644 --- a/tools/test/perform/sio_engine.c +++ b/tools/test/perform/sio_engine.c @@ -114,11 +114,11 @@ static const char *multi_letters = "msbrglo"; /* string for multi driver */ /* HDF5 global variables */ static hsize_t h5count[MAX_DIMS]; /*selection count */ static hssize_t h5offset[MAX_DIMS]; /* Selection offset within dataspace */ -static hid_t h5dset_space_id = -1; /*dataset space ID */ -static hid_t h5mem_space_id = -1; /*memory dataspace ID */ -static hid_t h5ds_id = -1; /*dataset handle */ -static hid_t h5dcpl = -1; /* Dataset creation property list */ -static hid_t h5dxpl = -1; /* Dataset transfer property list */ +static hid_t h5dset_space_id = H5I_INVALID_HID; /*dataset space ID */ +static hid_t h5mem_space_id = H5I_INVALID_HID; /*memory dataspace ID */ +static hid_t h5ds_id = H5I_INVALID_HID; /*dataset handle */ +static hid_t h5dcpl = H5I_INVALID_HID; /* Dataset creation property list */ +static hid_t h5dxpl = H5I_INVALID_HID; /* Dataset transfer property list */ /* * Function: do_sio @@ -575,7 +575,7 @@ do_write(results *res, file_descr *fd, parameters *parms, void *buffer) GOTOERROR(FAIL); } - h5ds_id = -1; + h5ds_id = H5I_INVALID_HID; } /* end if */ done: @@ -587,7 +587,7 @@ done: HDfprintf(stderr, "HDF5 Dataset Space Close failed\n"); ret_code = FAIL; } else { - h5dset_space_id = -1; + h5dset_space_id = H5I_INVALID_HID; } } @@ -597,7 +597,7 @@ done: HDfprintf(stderr, "HDF5 Memory Space Close failed\n"); ret_code = FAIL; } else { - h5mem_space_id = -1; + h5mem_space_id = H5I_INVALID_HID; } } @@ -607,7 +607,7 @@ done: HDfprintf(stderr, "HDF5 Dataset Transfer Property List Close failed\n"); ret_code = FAIL; } else { - h5dxpl = -1; + h5dxpl = H5I_INVALID_HID; } } @@ -894,7 +894,7 @@ do_read(results *res, file_descr *fd, parameters *parms, void *buffer) GOTOERROR(FAIL); } - h5ds_id = -1; + h5ds_id = H5I_INVALID_HID; } /* end if */ done: @@ -906,7 +906,7 @@ done: HDfprintf(stderr, "HDF5 Dataset Space Close failed\n"); ret_code = FAIL; } else { - h5dset_space_id = -1; + h5dset_space_id = H5I_INVALID_HID; } } @@ -916,7 +916,7 @@ done: HDfprintf(stderr, "HDF5 Memory Space Close failed\n"); ret_code = FAIL; } else { - h5mem_space_id = -1; + h5mem_space_id = H5I_INVALID_HID; } } @@ -926,7 +926,7 @@ done: HDfprintf(stderr, "HDF5 Dataset Transfer Property List Close failed\n"); ret_code = FAIL; } else { - h5dxpl = -1; + h5dxpl = H5I_INVALID_HID; } } @@ -1137,7 +1137,7 @@ done: hid_t set_vfd(parameters *param) { - hid_t my_fapl = -1; + hid_t my_fapl = H5I_INVALID_HID; vfdtype vfd; vfd = param->vfd; diff --git a/tools/test/perform/sio_perf.h b/tools/test/perform/sio_perf.h index 83caf54..d26c78b 100644 --- a/tools/test/perform/sio_perf.h +++ b/tools/test/perform/sio_perf.h @@ -13,12 +13,13 @@ #ifndef SIO_PERF_H__ #define SIO_PERF_H__ -#include "io_timer.h" #ifndef STANDALONE +#include "io_timer.h" #include "h5test.h" #include "h5tools.h" #include "h5tools_utils.h" #else +#include "io_timer.h" #include "sio_standalone.h" #endif diff --git a/tools/testfiles/trefer_attr.h5 b/tools/testfiles/trefer_attr.h5 Binary files differnew file mode 100644 index 0000000..3110ce3 --- /dev/null +++ b/tools/testfiles/trefer_attr.h5 diff --git a/tools/testfiles/trefer_attrR.ddl b/tools/testfiles/trefer_attrR.ddl new file mode 100644 index 0000000..e64c8e6 --- /dev/null +++ b/tools/testfiles/trefer_attrR.ddl @@ -0,0 +1,76 @@ +HDF5 "trefer_attr.h5" { +GROUP "/" { + DATASET "Dataset3" { + DATATYPE H5T_REFERENCE { H5T_STD_REF } + DATASPACE SIMPLE { ( 4 ) / ( 4 ) } + DATA { + ATTRIBUTE "trefer_attr.h5/Group1/Dataset1/Attr1" { + DATATYPE H5T_STD_U32LE + DATASPACE SIMPLE { ( 4 ) / ( 4 ) } + DATA { + (0): 0, 3, 6, 9 + } + } + ATTRIBUTE "trefer_attr.h5/Group1/Dataset2/Attr1" { + NULL + } + ATTRIBUTE "trefer_attr.h5/Group1/Attr2" { + DATATYPE H5T_STD_U32LE + DATASPACE SIMPLE { ( 4 ) / ( 4 ) } + DATA { + (0): 1, 4, 7, 10 + } + } + ATTRIBUTE "trefer_attr.h5/Group1/Datatype1/Attr3" { + DATATYPE H5T_STD_U32LE + DATASPACE SIMPLE { ( 4 ) / ( 4 ) } + DATA { + (0): 2, 5, 8, 11 + } + } + } + } + GROUP "Group1" { + ATTRIBUTE "Attr2" { + DATATYPE H5T_STD_U32LE + DATASPACE SIMPLE { ( 4 ) / ( 4 ) } + DATA { + (0): 1, 4, 7, 10 + } + } + DATASET "Dataset1" { + DATATYPE H5T_STD_U32LE + DATASPACE SIMPLE { ( 4 ) / ( 4 ) } + DATA { + (0): 0, 0, 0, 0 + } + ATTRIBUTE "Attr1" { + DATATYPE H5T_STD_U32LE + DATASPACE SIMPLE { ( 4 ) / ( 4 ) } + DATA { + (0): 0, 3, 6, 9 + } + } + } + DATASET "Dataset2" { + DATATYPE H5T_STD_U8LE + DATASPACE SIMPLE { ( 4 ) / ( 4 ) } + DATA { + (0): 0, 0, 0, 0 + } + } + DATATYPE "Datatype1" H5T_COMPOUND { + H5T_STD_I32LE "a"; + H5T_STD_I32LE "b"; + H5T_IEEE_F32LE "c"; + } + ATTRIBUTE "Attr3" { + DATATYPE H5T_STD_U32LE + DATASPACE SIMPLE { ( 4 ) / ( 4 ) } + DATA { + (0): 2, 5, 8, 11 + } + } + } +} +} diff --git a/tools/testfiles/trefer_compat.h5 b/tools/testfiles/trefer_compat.h5 Binary files differnew file mode 100644 index 0000000..5f6dd60 --- /dev/null +++ b/tools/testfiles/trefer_compat.h5 diff --git a/tools/testfiles/trefer_compatR.ddl b/tools/testfiles/trefer_compatR.ddl new file mode 100644 index 0000000..97c7934 --- /dev/null +++ b/tools/testfiles/trefer_compatR.ddl @@ -0,0 +1,114 @@ +HDF5 "trefer_compat.h5" { +GROUP "/" { + DATASET "Dataset3" { + DATATYPE H5T_REFERENCE { H5T_STD_REF_OBJECT } + DATASPACE SIMPLE { ( 4 ) / ( 4 ) } + DATA { + DATASET "trefer_compat.h5/Group1/Dataset1" + DATA { + (0,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (1,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (2,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (3,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (4,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (5,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (6,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (7,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (8,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (9,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 + } + DATASET "trefer_compat.h5/Group1/Dataset2" + DATA { + (0,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (1,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (2,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (3,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (4,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (5,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (6,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (7,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (8,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (9,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 + } + GROUP "trefer_compat.h5/Group1" + DATATYPE "trefer_compat.h5/Group1/Datatype1" + } + } + DATASET "Dataset4" { + DATATYPE H5T_REFERENCE { H5T_STD_REF_DSETREG } + DATASPACE SIMPLE { ( 2 ) / ( 2 ) } + DATA { + DATASET "trefer_compat.h5/Group1/Dataset1" { + REGION_TYPE BLOCK (2,2)-(7,7) + DATATYPE H5T_STD_U32LE + DATASPACE SIMPLE { ( 10, 10 ) / ( 10, 10 ) } + DATA { + 0, 0, 0, 0, 0, 0, + 0, 0, 0, 0, 0, 0, + 0, 0, 0, 0, 0, 0, + 0, 0, 0, 0, 0, 0, + 0, 0, 0, 0, 0, 0, + 0, 0, 0, 0, 0, 0 + } + } + DATASET "trefer_compat.h5/Group1/Dataset2" { + REGION_TYPE POINT (6,9), (2,2), (8,4), (1,6), (2,8), (3,2), + (0,4), (9,0), (7,1), (3,3) + DATATYPE H5T_STD_U8LE + DATASPACE SIMPLE { ( 10, 10 ) / ( 10, 10 ) } + DATA { + 0, + 0, + 0, + 0, + 0, + 0, + 0, + 0, + 0, + 0 + } + } + } + } + GROUP "Group1" { + DATASET "Dataset1" { + DATATYPE H5T_STD_U32LE + DATASPACE SIMPLE { ( 10, 10 ) / ( 10, 10 ) } + DATA { + (0,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (1,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (2,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (3,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (4,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (5,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (6,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (7,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (8,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (9,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 + } + } + DATASET "Dataset2" { + DATATYPE H5T_STD_U8LE + DATASPACE SIMPLE { ( 10, 10 ) / ( 10, 10 ) } + DATA { + (0,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (1,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (2,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (3,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (4,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (5,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (6,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (7,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (8,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + (9,0): 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 + } + } + DATATYPE "Datatype1" H5T_COMPOUND { + H5T_STD_I32LE "a"; + H5T_STD_I32LE "b"; + H5T_IEEE_F32LE "c"; + } + } +} +} diff --git a/tools/testfiles/trefer_ext1.h5 b/tools/testfiles/trefer_ext1.h5 Binary files differnew file mode 100644 index 0000000..9fc9741 --- /dev/null +++ b/tools/testfiles/trefer_ext1.h5 diff --git a/tools/testfiles/trefer_ext2.h5 b/tools/testfiles/trefer_ext2.h5 Binary files differnew file mode 100644 index 0000000..fcbb75d --- /dev/null +++ b/tools/testfiles/trefer_ext2.h5 diff --git a/tools/testfiles/trefer_extR.ddl b/tools/testfiles/trefer_extR.ddl new file mode 100644 index 0000000..3d4647d --- /dev/null +++ b/tools/testfiles/trefer_extR.ddl @@ -0,0 +1,34 @@ +HDF5 "trefer_ext2.h5" { +GROUP "/" { + DATASET "Dataset3" { + DATATYPE H5T_REFERENCE { H5T_STD_REF } + DATASPACE SIMPLE { ( 4 ) / ( 4 ) } + DATA { + ATTRIBUTE "trefer_ext1.h5/Group1/Dataset1/Attr1" { + DATATYPE H5T_STD_U32LE + DATASPACE SIMPLE { ( 4 ) / ( 4 ) } + DATA { + (0): 0, 3, 6, 9 + } + } + ATTRIBUTE "trefer_ext1.h5/Group1/Dataset2/Attr1" { + NULL + } + ATTRIBUTE "trefer_ext1.h5/Group1/Attr2" { + DATATYPE H5T_STD_U32LE + DATASPACE SIMPLE { ( 4 ) / ( 4 ) } + DATA { + (0): 1, 4, 7, 10 + } + } + ATTRIBUTE "trefer_ext1.h5/Group1/Datatype1/Attr3" { + DATATYPE H5T_STD_U32LE + DATASPACE SIMPLE { ( 4 ) / ( 4 ) } + DATA { + (0): 2, 5, 8, 11 + } + } + } + } +} +} diff --git a/tools/testfiles/trefer_grp.h5 b/tools/testfiles/trefer_grp.h5 Binary files differnew file mode 100644 index 0000000..d846e75 --- /dev/null +++ b/tools/testfiles/trefer_grp.h5 diff --git a/tools/testfiles/trefer_grpR.ddl b/tools/testfiles/trefer_grpR.ddl new file mode 100644 index 0000000..298b836 --- /dev/null +++ b/tools/testfiles/trefer_grpR.ddl @@ -0,0 +1,15 @@ +HDF5 "trefer_grp.h5" { +GROUP "/" { + DATASET "dset" { + DATATYPE H5T_REFERENCE { H5T_STD_REF } + DATASPACE SCALAR + DATA { + GROUP "trefer_grp.h5/group" + } + } + GROUP "group" { + GROUP "group3" { + } + } +} +} diff --git a/tools/testfiles/trefer_obj.h5 b/tools/testfiles/trefer_obj.h5 Binary files differnew file mode 100644 index 0000000..de4c19d --- /dev/null +++ b/tools/testfiles/trefer_obj.h5 diff --git a/tools/testfiles/trefer_objR.ddl b/tools/testfiles/trefer_objR.ddl new file mode 100644 index 0000000..0d5af28 --- /dev/null +++ b/tools/testfiles/trefer_objR.ddl @@ -0,0 +1,59 @@ +HDF5 "trefer_obj.h5" { +GROUP "/" { + DATASET "Dataset3" { + DATATYPE H5T_REFERENCE { H5T_STD_REF } + DATASPACE SIMPLE { ( 1 ) / ( 1 ) } + DATA { + DATASET "trefer_obj.h5/Group1/Dataset1" + DATA { + (0): 0 + } + } + } + DATASET "Dataset4" { + DATATYPE H5T_REFERENCE { H5T_STD_REF_OBJECT } + DATASPACE SIMPLE { ( 1 ) / ( 1 ) } + DATA { + DATASET "trefer_obj.h5/Group1/Dataset1" + DATA { + (0): 0 + } + } + } + DATASET "Dataset5" { + DATATYPE H5T_REFERENCE { H5T_STD_REF } + DATASPACE SIMPLE { ( 1 ) / ( 1 ) } + DATA { + DATASET "trefer_obj.h5/Group1/Dataset1" + } + } + DATASET "Dataset6" { + DATATYPE H5T_REFERENCE { H5T_STD_REF_DSETREG } + DATASPACE SIMPLE { ( 1 ) / ( 1 ) } + DATA { + DATASET "trefer_obj.h5/Group1/Dataset1" + } + } + GROUP "Group1" { + DATASET "Dataset1" { + DATATYPE H5T_STD_U32LE + DATASPACE SIMPLE { ( 1 ) / ( 1 ) } + DATA { + (0): 0 + } + } + DATASET "Dataset2" { + DATATYPE H5T_STD_U8LE + DATASPACE SIMPLE { ( 1 ) / ( 1 ) } + DATA { + (0): 0 + } + } + DATATYPE "Datatype1" H5T_COMPOUND { + H5T_STD_I32LE "a"; + H5T_STD_I32LE "b"; + H5T_IEEE_F32LE "c"; + } + } +} +} diff --git a/tools/testfiles/trefer_obj_del.h5 b/tools/testfiles/trefer_obj_del.h5 Binary files differnew file mode 100644 index 0000000..c1710e8 --- /dev/null +++ b/tools/testfiles/trefer_obj_del.h5 diff --git a/tools/testfiles/trefer_obj_delR.ddl b/tools/testfiles/trefer_obj_delR.ddl new file mode 100644 index 0000000..fa238a5 --- /dev/null +++ b/tools/testfiles/trefer_obj_delR.ddl @@ -0,0 +1,11 @@ +HDF5 "trefer_obj_del.h5" { +GROUP "/" { + DATASET "Dataset2" { + DATATYPE H5T_REFERENCE { H5T_STD_REF } + DATASPACE SCALAR + DATA { + UNKNOWN "trefer_obj_del.h5" + } + } +} +} diff --git a/tools/testfiles/trefer_param.h5 b/tools/testfiles/trefer_param.h5 Binary files differnew file mode 100644 index 0000000..234629a --- /dev/null +++ b/tools/testfiles/trefer_param.h5 diff --git a/tools/testfiles/trefer_paramR.ddl b/tools/testfiles/trefer_paramR.ddl new file mode 100644 index 0000000..ce9fa86 --- /dev/null +++ b/tools/testfiles/trefer_paramR.ddl @@ -0,0 +1,43 @@ +HDF5 "trefer_param.h5" { +GROUP "/" { + DATASET "Dataset3" { + DATATYPE H5T_REFERENCE { H5T_STD_REF } + DATASPACE SIMPLE { ( 4 ) / ( 4 ) } + DATA { + NULL + NULL + NULL + NULL + } + } + GROUP "Group1" { + COMMENT "Foo!" + DATASET "Dataset1" { + DATATYPE H5T_STD_U32LE + DATASPACE SIMPLE { ( 4 ) / ( 4 ) } + DATA { + (0): 0, 3, 6, 9 + } + } + DATASET "Dataset2" { + DATATYPE H5T_STD_U8LE + DATASPACE SIMPLE { ( 4 ) / ( 4 ) } + DATA { + (0): 0, 0, 0, 0 + } + ATTRIBUTE "Attr" { + DATATYPE H5T_STD_U32LE + DATASPACE SIMPLE { ( 4 ) / ( 4 ) } + DATA { + (0): 0, 3, 6, 9 + } + } + } + DATATYPE "Datatype1" H5T_COMPOUND { + H5T_STD_I32LE "a"; + H5T_STD_I32LE "b"; + H5T_IEEE_F32LE "c"; + } + } +} +} diff --git a/tools/testfiles/trefer_reg.h5 b/tools/testfiles/trefer_reg.h5 Binary files differnew file mode 100644 index 0000000..8ed9184 --- /dev/null +++ b/tools/testfiles/trefer_reg.h5 diff --git a/tools/testfiles/trefer_regR.ddl b/tools/testfiles/trefer_regR.ddl new file mode 100644 index 0000000..683c196 --- /dev/null +++ b/tools/testfiles/trefer_regR.ddl @@ -0,0 +1,66 @@ +HDF5 "trefer_reg.h5" { +GROUP "/" { + DATASET "DS_NA" { + DATATYPE H5T_REFERENCE { H5T_STD_REF } + DATASPACE SIMPLE { ( 1 ) / ( 1 ) } + DATA { + NULL + } + } + DATASET "Dataset1" { + DATATYPE H5T_REFERENCE { H5T_STD_REF } + DATASPACE SIMPLE { ( 4 ) / ( 4 ) } + DATA { + DATASET "trefer_reg.h5/Dataset2" { + REGION_TYPE BLOCK (2,2)-(7,7) + DATATYPE H5T_STD_U8LE + DATASPACE SIMPLE { ( 10, 10 ) / ( 10, 10 ) } + DATA { + 66, 69, 72, 75, 78, 81, + 96, 99, 102, 105, 108, 111, + 126, 129, 132, 135, 138, 141, + 156, 159, 162, 165, 168, 171, + 186, 189, 192, 195, 198, 201, + 216, 219, 222, 225, 228, 231 + } + } + DATASET "trefer_reg.h5/Dataset2" { + REGION_TYPE POINT (6,9), (2,2), (8,4), (1,6), (2,8), (3,2), + (0,4), (9,0), (7,1), (3,3) + DATATYPE H5T_STD_U8LE + DATASPACE SIMPLE { ( 10, 10 ) / ( 10, 10 ) } + DATA { + 207, + 66, + 252, + 48, + 84, + 96, + 12, + 14, + 213, + 99 + } + } + DATASET "trefer_reg.h5/Dataset2" + DATASET "trefer_reg.h5/Dataset2" + } + } + DATASET "Dataset2" { + DATATYPE H5T_STD_U8LE + DATASPACE SIMPLE { ( 10, 10 ) / ( 10, 10 ) } + DATA { + (0,0): 0, 3, 6, 9, 12, 15, 18, 21, 24, 27, + (1,0): 30, 33, 36, 39, 42, 45, 48, 51, 54, 57, + (2,0): 60, 63, 66, 69, 72, 75, 78, 81, 84, 87, + (3,0): 90, 93, 96, 99, 102, 105, 108, 111, 114, 117, + (4,0): 120, 123, 126, 129, 132, 135, 138, 141, 144, 147, + (5,0): 150, 153, 156, 159, 162, 165, 168, 171, 174, 177, + (6,0): 180, 183, 186, 189, 192, 195, 198, 201, 204, 207, + (7,0): 210, 213, 216, 219, 222, 225, 228, 231, 234, 237, + (8,0): 240, 243, 246, 249, 252, 255, 2, 5, 8, 11, + (9,0): 14, 17, 20, 23, 26, 29, 32, 35, 38, 41 + } + } +} +} diff --git a/tools/testfiles/trefer_reg_1d.h5 b/tools/testfiles/trefer_reg_1d.h5 Binary files differnew file mode 100644 index 0000000..932454d --- /dev/null +++ b/tools/testfiles/trefer_reg_1d.h5 diff --git a/tools/testfiles/trefer_reg_1dR.ddl b/tools/testfiles/trefer_reg_1dR.ddl new file mode 100644 index 0000000..3e5f652 --- /dev/null +++ b/tools/testfiles/trefer_reg_1dR.ddl @@ -0,0 +1,66 @@ +HDF5 "trefer_reg_1d.h5" { +GROUP "/" { + DATASET "Dataset1" { + DATATYPE H5T_REFERENCE { H5T_STD_REF } + DATASPACE SIMPLE { ( 2 ) / ( 2 ) } + DATA { + DATASET "trefer_reg_1d.h5/Dataset2" { + REGION_TYPE BLOCK (2)-(3), (7)-(8), (12)-(13), (17)-(18), + (22)-(23), (27)-(28), (32)-(33), (37)-(38), (42)-(43), + (47)-(48), (52)-(53), (57)-(58), (62)-(63), (67)-(68), + (72)-(73) + DATATYPE H5T_STD_U8LE + DATASPACE SIMPLE { ( 100 ) / ( 100 ) } + DATA { + 6, 9, + 21, 24, + 36, 39, + 51, 54, + 66, 69, + 81, 84, + 96, 99, + 111, 114, + 126, 129, + 141, 144, + 156, 159, + 171, 174, + 186, 189, + 201, 204, + 216, 219 + } + } + DATASET "trefer_reg_1d.h5/Dataset2" { + REGION_TYPE POINT (16), (22), (38), (41), (52), (63), (70), + (89), (97), (3) + DATATYPE H5T_STD_U8LE + DATASPACE SIMPLE { ( 100 ) / ( 100 ) } + DATA { + 48, + 66, + 114, + 123, + 156, + 189, + 210, + 11, + 35, + 9 + } + } + } + } + DATASET "Dataset2" { + DATATYPE H5T_STD_U8LE + DATASPACE SIMPLE { ( 100 ) / ( 100 ) } + DATA { + (0): 0, 3, 6, 9, 12, 15, 18, 21, 24, 27, 30, 33, 36, 39, 42, 45, 48, + (17): 51, 54, 57, 60, 63, 66, 69, 72, 75, 78, 81, 84, 87, 90, 93, 96, + (33): 99, 102, 105, 108, 111, 114, 117, 120, 123, 126, 129, 132, 135, + (46): 138, 141, 144, 147, 150, 153, 156, 159, 162, 165, 168, 171, 174, + (59): 177, 180, 183, 186, 189, 192, 195, 198, 201, 204, 207, 210, 213, + (72): 216, 219, 222, 225, 228, 231, 234, 237, 240, 243, 246, 249, 252, + (85): 255, 2, 5, 8, 11, 14, 17, 20, 23, 26, 29, 32, 35, 38, 41 + } + } +} +} |