diff options
-rw-r--r-- | CMakeLists.txt | 11 | ||||
-rw-r--r-- | config/cmake/H5pubconf.h.in | 3 | ||||
-rw-r--r-- | m4/ax_python_devel.m4 | 324 | ||||
-rw-r--r-- | src/H5VLiod_server.c | 14 |
4 files changed, 352 insertions, 0 deletions
diff --git a/CMakeLists.txt b/CMakeLists.txt index d2f348e..425aa3a 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -701,6 +701,17 @@ IF (HDF5_ENABLE_PARALLEL) IF (AXE_FOUND AND MERCURY_FOUND AND IOD_FOUND) SET (H5_HAVE_EFF 1) ENDIF (AXE_FOUND AND MERCURY_FOUND AND IOD_FOUND) + OPTION (HDF5_ENABLE_PYTHON "Enable support for Python scripting." ON) + IF (HDF5_ENABLE_PYTHON) + FIND_PACKAGE(PythonLibs REQUIRED) + IF (PYTHONLIBS_FOUND) + INCLUDE_DIRECTORIES (${PYTHON_INCLUDE_DIR}) + SET (LINK_LIBS ${LINK_LIBS} ${PYTHON_LIBRARIES}) + SET (H5_HAVE_PYTHON 1) + ELSE (PYTHONLIBS_FOUND) + MESSAGE (FATAL_ERROR "Could not find Python Libraries, please check PYTHON_INCLUDE_DIR.") + ENDIF (PYTHONLIBS_FOUND) + ENDIF (HDF5_ENABLE_PYTHON) ENDIF (HDF5_ENABLE_EFF) ENDIF (HDF5_ENABLE_PARALLEL) diff --git a/config/cmake/H5pubconf.h.in b/config/cmake/H5pubconf.h.in index 614bf63..a2a2810 100644 --- a/config/cmake/H5pubconf.h.in +++ b/config/cmake/H5pubconf.h.in @@ -317,6 +317,9 @@ /* Define if we have EFF support */ #cmakedefine H5_HAVE_EFF @H5_HAVE_EFF@ +/* Define if we have Python support */ +#cmakedefine H5_HAVE_PYTHON @H5_HAVE_PYTHON@ + /* Define to 1 if you have the <pthread.h> header file. */ #cmakedefine H5_HAVE_PTHREAD_H @H5_HAVE_PTHREAD_H@ diff --git a/m4/ax_python_devel.m4 b/m4/ax_python_devel.m4 new file mode 100644 index 0000000..cf2163c --- /dev/null +++ b/m4/ax_python_devel.m4 @@ -0,0 +1,324 @@ +# =========================================================================== +# http://www.gnu.org/software/autoconf-archive/ax_python_devel.html +# =========================================================================== +# +# SYNOPSIS +# +# AX_PYTHON_DEVEL([version]) +# +# DESCRIPTION +# +# Note: Defines as a precious variable "PYTHON_VERSION". Don't override it +# in your configure.ac. +# +# This macro checks for Python and tries to get the include path to +# 'Python.h'. It provides the $(PYTHON_CPPFLAGS) and $(PYTHON_LDFLAGS) +# output variables. It also exports $(PYTHON_EXTRA_LIBS) and +# $(PYTHON_EXTRA_LDFLAGS) for embedding Python in your code. +# +# You can search for some particular version of Python by passing a +# parameter to this macro, for example ">= '2.3.1'", or "== '2.4'". Please +# note that you *have* to pass also an operator along with the version to +# match, and pay special attention to the single quotes surrounding the +# version number. Don't use "PYTHON_VERSION" for this: that environment +# variable is declared as precious and thus reserved for the end-user. +# +# This macro should work for all versions of Python >= 2.1.0. As an end +# user, you can disable the check for the python version by setting the +# PYTHON_NOVERSIONCHECK environment variable to something else than the +# empty string. +# +# If you need to use this macro for an older Python version, please +# contact the authors. We're always open for feedback. +# +# LICENSE +# +# Copyright (c) 2009 Sebastian Huber <sebastian-huber@web.de> +# Copyright (c) 2009 Alan W. Irwin +# Copyright (c) 2009 Rafael Laboissiere <rafael@laboissiere.net> +# Copyright (c) 2009 Andrew Collier +# Copyright (c) 2009 Matteo Settenvini <matteo@member.fsf.org> +# Copyright (c) 2009 Horst Knorr <hk_classes@knoda.org> +# Copyright (c) 2013 Daniel Mullner <muellner@math.stanford.edu> +# +# This program is free software: you can redistribute it and/or modify it +# under the terms of the GNU General Public License as published by the +# Free Software Foundation, either version 3 of the License, or (at your +# option) any later version. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General +# Public License for more details. +# +# You should have received a copy of the GNU General Public License along +# with this program. If not, see <http://www.gnu.org/licenses/>. +# +# As a special exception, the respective Autoconf Macro's copyright owner +# gives unlimited permission to copy, distribute and modify the configure +# scripts that are the output of Autoconf when processing the Macro. You +# need not follow the terms of the GNU General Public License when using +# or distributing such scripts, even though portions of the text of the +# Macro appear in them. The GNU General Public License (GPL) does govern +# all other use of the material that constitutes the Autoconf Macro. +# +# This special exception to the GPL applies to versions of the Autoconf +# Macro released by the Autoconf Archive. When you make and distribute a +# modified version of the Autoconf Macro, you may extend this special +# exception to the GPL to apply to your modified version as well. + +#serial 16 + +AU_ALIAS([AC_PYTHON_DEVEL], [AX_PYTHON_DEVEL]) +AC_DEFUN([AX_PYTHON_DEVEL],[ + # + # Allow the use of a (user set) custom python version + # + AC_ARG_VAR([PYTHON_VERSION],[The installed Python + version to use, for example '2.3'. This string + will be appended to the Python interpreter + canonical name.]) + + AC_PATH_PROG([PYTHON],[python[$PYTHON_VERSION]]) + if test -z "$PYTHON"; then + AC_MSG_ERROR([Cannot find python$PYTHON_VERSION in your system path]) + PYTHON_VERSION="" + fi + + # + # Check for a version of Python >= 2.1.0 + # + AC_MSG_CHECKING([for a version of Python >= '2.1.0']) + ac_supports_python_ver=`$PYTHON -c "import sys; \ + ver = sys.version.split ()[[0]]; \ + print (ver >= '2.1.0')"` + if test "$ac_supports_python_ver" != "True"; then + if test -z "$PYTHON_NOVERSIONCHECK"; then + AC_MSG_RESULT([no]) + AC_MSG_FAILURE([ +This version of the AC@&t@_PYTHON_DEVEL macro +doesn't work properly with versions of Python before +2.1.0. You may need to re-run configure, setting the +variables PYTHON_CPPFLAGS, PYTHON_LDFLAGS, PYTHON_SITE_PKG, +PYTHON_EXTRA_LIBS and PYTHON_EXTRA_LDFLAGS by hand. +Moreover, to disable this check, set PYTHON_NOVERSIONCHECK +to something else than an empty string. +]) + else + AC_MSG_RESULT([skip at user request]) + fi + else + AC_MSG_RESULT([yes]) + fi + + # + # if the macro parameter ``version'' is set, honour it + # + if test -n "$1"; then + AC_MSG_CHECKING([for a version of Python $1]) + ac_supports_python_ver=`$PYTHON -c "import sys; \ + ver = sys.version.split ()[[0]]; \ + print (ver $1)"` + if test "$ac_supports_python_ver" = "True"; then + AC_MSG_RESULT([yes]) + else + AC_MSG_RESULT([no]) + AC_MSG_ERROR([this package requires Python $1. +If you have it installed, but it isn't the default Python +interpreter in your system path, please pass the PYTHON_VERSION +variable to configure. See ``configure --help'' for reference. +]) + PYTHON_VERSION="" + fi + fi + + # + # Check if you have distutils, else fail + # + AC_MSG_CHECKING([for the distutils Python package]) + ac_distutils_result=`$PYTHON -c "import distutils" 2>&1` + if test -z "$ac_distutils_result"; then + AC_MSG_RESULT([yes]) + else + AC_MSG_RESULT([no]) + AC_MSG_ERROR([cannot import Python module "distutils". +Please check your Python installation. The error was: +$ac_distutils_result]) + PYTHON_VERSION="" + fi + + # + # Check for Python include path + # + AC_MSG_CHECKING([for Python include path]) + if test -z "$PYTHON_CPPFLAGS"; then + python_path=`$PYTHON -c "import distutils.sysconfig; \ + print (distutils.sysconfig.get_python_inc ());"` + plat_python_path=`$PYTHON -c "import distutils.sysconfig; \ + print (distutils.sysconfig.get_python_inc (plat_specific=1));"` + if test -n "${python_path}"; then + if test "${plat_python_path}" != "${python_path}"; then + python_path="-I$python_path -I$plat_python_path" + else + python_path="-I$python_path" + fi + fi + PYTHON_CPPFLAGS=$python_path + fi + AC_MSG_RESULT([$PYTHON_CPPFLAGS]) + AC_SUBST([PYTHON_CPPFLAGS]) + + # + # Check for Python library path + # + AC_MSG_CHECKING([for Python library path]) + if test -z "$PYTHON_LDFLAGS"; then + # (makes two attempts to ensure we've got a version number + # from the interpreter) + ac_python_version=`cat<<EOD | $PYTHON - + +# join all versioning strings, on some systems +# major/minor numbers could be in different list elements +from distutils.sysconfig import * +e = get_config_var('VERSION') +if e is not None: + print(e) +EOD` + + if test -z "$ac_python_version"; then + if test -n "$PYTHON_VERSION"; then + ac_python_version=$PYTHON_VERSION + else + ac_python_version=`$PYTHON -c "import sys; \ + print (sys.version[[:3]])"` + fi + fi + + # Make the versioning information available to the compiler + AC_DEFINE_UNQUOTED([HAVE_PYTHON], ["$ac_python_version"], + [If available, contains the Python version number currently in use.]) + + # First, the library directory: + ac_python_libdir=`cat<<EOD | $PYTHON - + +# There should be only one +import distutils.sysconfig +e = distutils.sysconfig.get_config_var('LIBDIR') +if e is not None: + print (e) +EOD` + + # Now, for the library: + ac_python_library=`cat<<EOD | $PYTHON - + +import distutils.sysconfig +c = distutils.sysconfig.get_config_vars() +if 'LDVERSION' in c: + print ('python'+c[['LDVERSION']]) +else: + print ('python'+c[['VERSION']]) +EOD` + + # This small piece shamelessly adapted from PostgreSQL python macro; + # credits goes to momjian, I think. I'd like to put the right name + # in the credits, if someone can point me in the right direction... ? + # + if test -n "$ac_python_libdir" -a -n "$ac_python_library" + then + # use the official shared library + ac_python_library=`echo "$ac_python_library" | sed "s/^lib//"` + PYTHON_LDFLAGS="-L$ac_python_libdir -l$ac_python_library" + else + # old way: use libpython from python_configdir + ac_python_libdir=`$PYTHON -c \ + "from distutils.sysconfig import get_python_lib as f; \ + import os; \ + print (os.path.join(f(plat_specific=1, standard_lib=1), 'config'));"` + PYTHON_LDFLAGS="-L$ac_python_libdir -lpython$ac_python_version" + fi + + if test -z "PYTHON_LDFLAGS"; then + AC_MSG_ERROR([ + Cannot determine location of your Python DSO. Please check it was installed with + dynamic libraries enabled, or try setting PYTHON_LDFLAGS by hand. + ]) + fi + fi + AC_MSG_RESULT([$PYTHON_LDFLAGS]) + AC_SUBST([PYTHON_LDFLAGS]) + + # + # Check for site packages + # + AC_MSG_CHECKING([for Python site-packages path]) + if test -z "$PYTHON_SITE_PKG"; then + PYTHON_SITE_PKG=`$PYTHON -c "import distutils.sysconfig; \ + print (distutils.sysconfig.get_python_lib(0,0));"` + fi + AC_MSG_RESULT([$PYTHON_SITE_PKG]) + AC_SUBST([PYTHON_SITE_PKG]) + + # + # libraries which must be linked in when embedding + # + AC_MSG_CHECKING(python extra libraries) + if test -z "$PYTHON_EXTRA_LIBS"; then + PYTHON_EXTRA_LIBS=`$PYTHON -c "import distutils.sysconfig; \ + conf = distutils.sysconfig.get_config_var; \ + print (conf('LIBS'))"` + fi + AC_MSG_RESULT([$PYTHON_EXTRA_LIBS]) + AC_SUBST(PYTHON_EXTRA_LIBS) + + # + # linking flags needed when embedding + # + AC_MSG_CHECKING(python extra linking flags) + if test -z "$PYTHON_EXTRA_LDFLAGS"; then + PYTHON_EXTRA_LDFLAGS=`$PYTHON -c "import distutils.sysconfig; \ + conf = distutils.sysconfig.get_config_var; \ + print (conf('LINKFORSHARED'))"` + fi + AC_MSG_RESULT([$PYTHON_EXTRA_LDFLAGS]) + AC_SUBST(PYTHON_EXTRA_LDFLAGS) + + # + # final check to see if everything compiles alright + # + AC_MSG_CHECKING([consistency of all components of python development environment]) + # save current global flags + ac_save_LIBS="$LIBS" + ac_save_CPPFLAGS="$CPPFLAGS" + LIBS="$ac_save_LIBS $PYTHON_LDFLAGS $PYTHON_EXTRA_LDFLAGS $PYTHON_EXTRA_LIBS" + CPPFLAGS="$ac_save_CPPFLAGS $PYTHON_CPPFLAGS" + AC_LANG_PUSH([C]) + AC_LINK_IFELSE([ + AC_LANG_PROGRAM([[#include <Python.h>]], + [[Py_Initialize();]]) + ],[pythonexists=yes],[pythonexists=no]) + AC_LANG_POP([C]) + # turn back to default flags + CPPFLAGS="$ac_save_CPPFLAGS" + LIBS="$ac_save_LIBS" + + AC_MSG_RESULT([$pythonexists]) + + if test ! "x$pythonexists" = "xyes"; then + AC_MSG_FAILURE([ + Could not link test program to Python. Maybe the main Python library has been + installed in some non-standard library path. If so, pass it to configure, + via the LDFLAGS environment variable. + Example: ./configure LDFLAGS="-L/usr/non-standard-path/python/lib" + ============================================================================ + ERROR! + You probably have to install the development version of the Python package + for your distribution. The exact name of this package varies among them. + ============================================================================ + ]) + PYTHON_VERSION="" + fi + + # + # all done! + # +]) diff --git a/src/H5VLiod_server.c b/src/H5VLiod_server.c index 09f3b7d..5b68f1f 100644 --- a/src/H5VLiod_server.c +++ b/src/H5VLiod_server.c @@ -15,6 +15,10 @@ #include "H5VLiod_server.h" +#ifdef H5_HAVE_PYTHON +#include <Python.h> +#endif + #ifdef H5_HAVE_EFF /* @@ -274,6 +278,11 @@ EFF_start_server(MPI_Comm comm, MPI_Info UNUSED info) if(AXEcreate_engine(&engine, &engine_attr) != AXE_SUCCEED) return FAIL; + /* Initialize Python runtime */ +#ifdef H5_HAVE_PYTHON + Py_Initialize(); +#endif + /* Loop to receive requests from clients */ while(1) { HG_Handler_process(0, HG_STATUS_IGNORE); @@ -281,6 +290,11 @@ EFF_start_server(MPI_Comm comm, MPI_Info UNUSED info) break; } + /* Finalize Python runtime */ +#ifdef H5_HAVE_PYTHON + Py_Finalize(); +#endif + if(AXE_SUCCEED != AXEterminate_engine(engine, TRUE)) return FAIL; |