diff options
31 files changed, 4400 insertions, 6 deletions
diff --git a/CMakeLists.txt b/CMakeLists.txt index 43088b0..8283fbc 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -225,6 +225,7 @@ set (HDF5_JAVA_LIB_DIR ${HDF5_SOURCE_DIR}/java/lib) set (HDF5_JAVA_LOGGING_JAR ${HDF5_SOURCE_DIR}/java/lib/slf4j-api-1.7.25.jar) set (HDF5_JAVA_LOGGING_NOP_JAR ${HDF5_SOURCE_DIR}/java/lib/ext/slf4j-nop-1.7.25.jar) set (HDF5_JAVA_LOGGING_SIMPLE_JAR ${HDF5_SOURCE_DIR}/java/lib/ext/slf4j-simple-1.7.25.jar) +set (HDF5_DOXYGEN_DIR ${HDF5_SOURCE_DIR}/doxygen) #----------------------------------------------------------------------------- # parse the full version number from H5public.h and include in H5_VERS_INFO @@ -532,6 +533,20 @@ endif () # endif () #----------------------------------------------------------------------------- +# Option to build documentation +#----------------------------------------------------------------------------- +option (HDF5_BUILD_DOC "Build documentation" ON) +if (HDF5_BUILD_DOC AND EXISTS "${HDF5_DOXYGEN_DIR}" AND IS_DIRECTORY "${HDF5_DOXYGEN_DIR}") +# check if Doxygen is installed + find_package(Doxygen) + if (DOXYGEN_FOUND) + message(STATUS "Doxygen version: ${DOXYGEN_VERSION}") + else () + message(STATUS "Doxygen needs to be installed to generate the doxygen documentation") + endif () +endif () + +#----------------------------------------------------------------------------- # Option to indicate using a memory checker #----------------------------------------------------------------------------- option (HDF5_ENABLE_USING_MEMCHECKER "Indicate that a memory checker is used" OFF) diff --git a/Makefile.am b/Makefile.am index 9cb5d02..21bc550 100644 --- a/Makefile.am +++ b/Makefile.am @@ -187,6 +187,16 @@ check-all-install: trace: @(cd src && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1; +# Run doxygen across source files. +# Currently, only invoke doxygen in the src directory. +doxygen: + @echo Invoking doxygen + for d in src; do \ + if test $$d != .; then \ + (cd $$d && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1; \ + fi; \ + done + # Run tests with different Virtual File Drivers. # Currently, only invoke check-vfd in the test directory. check-vfd: diff --git a/config/doxygen.am b/config/doxygen.am new file mode 100644 index 0000000..cf37f1a --- /dev/null +++ b/config/doxygen.am @@ -0,0 +1,156 @@ +## --------------------------------- ## +## Format-independent Doxygen rules. ## +## --------------------------------- ## + +if DX_COND_doc + +## ------------------------------- ## +## Rules specific for HTML output. ## +## ------------------------------- ## + +if DX_COND_html + +DX_CLEAN_HTML = @DX_DOCDIR@/html + +endif DX_COND_html + +## ------------------------------ ## +## Rules specific for CHM output. ## +## ------------------------------ ## + +if DX_COND_chm + +DX_CLEAN_CHM = @DX_DOCDIR@/chm + +if DX_COND_chi + +DX_CLEAN_CHI = @DX_DOCDIR@/@PACKAGE@.chi + +endif DX_COND_chi + +endif DX_COND_chm + +## ------------------------------ ## +## Rules specific for MAN output. ## +## ------------------------------ ## + +if DX_COND_man + +DX_CLEAN_MAN = @DX_DOCDIR@/man + +endif DX_COND_man + +## ------------------------------ ## +## Rules specific for RTF output. ## +## ------------------------------ ## + +if DX_COND_rtf + +DX_CLEAN_RTF = @DX_DOCDIR@/rtf + +endif DX_COND_rtf + +## ------------------------------ ## +## Rules specific for XML output. ## +## ------------------------------ ## + +if DX_COND_xml + +DX_CLEAN_XML = @DX_DOCDIR@/xml + +endif DX_COND_xml + +## ----------------------------- ## +## Rules specific for PS output. ## +## ----------------------------- ## + +if DX_COND_ps + +DX_CLEAN_PS = @DX_DOCDIR@/@PACKAGE@.ps + +DX_PS_GOAL = doxygen-ps + +doxygen-ps: @DX_DOCDIR@/@PACKAGE@.ps + +@DX_DOCDIR@/@PACKAGE@.ps: @DX_DOCDIR@/@PACKAGE@.tag + cd @DX_DOCDIR@/latex; \ + rm -f *.aux *.toc *.idx *.ind *.ilg *.log *.out; \ + $(DX_LATEX) refman.tex; \ + $(MAKEINDEX_PATH) refman.idx; \ + $(DX_LATEX) refman.tex; \ + countdown=5; \ + while $(DX_EGREP) 'Rerun (LaTeX|to get cross-references right)' \ + refman.log > /dev/null 2>&1 \ + && test $$countdown -gt 0; do \ + $(DX_LATEX) refman.tex; \ + countdown=`expr $$countdown - 1`; \ + done; \ + $(DX_DVIPS) -o ../@PACKAGE@.ps refman.dvi + +endif DX_COND_ps + +## ------------------------------ ## +## Rules specific for PDF output. ## +## ------------------------------ ## + +if DX_COND_pdf + +DX_CLEAN_PDF = @DX_DOCDIR@/@PACKAGE@.pdf + +DX_PDF_GOAL = doxygen-pdf + +doxygen-pdf: @DX_DOCDIR@/@PACKAGE@.pdf + +@DX_DOCDIR@/@PACKAGE@.pdf: @DX_DOCDIR@/@PACKAGE@.tag + cd @DX_DOCDIR@/latex; \ + rm -f *.aux *.toc *.idx *.ind *.ilg *.log *.out; \ + $(DX_PDFLATEX) refman.tex; \ + $(DX_MAKEINDEX) refman.idx; \ + $(DX_PDFLATEX) refman.tex; \ + countdown=5; \ + while $(DX_EGREP) 'Rerun (LaTeX|to get cross-references right)' \ + refman.log > /dev/null 2>&1 \ + && test $$countdown -gt 0; do \ + $(DX_PDFLATEX) refman.tex; \ + countdown=`expr $$countdown - 1`; \ + done; \ + mv refman.pdf ../@PACKAGE@.pdf + +endif DX_COND_pdf + +## ------------------------------------------------- ## +## Rules specific for LaTeX (shared for PS and PDF). ## +## ------------------------------------------------- ## + +if DX_COND_latex + +DX_CLEAN_LATEX = @DX_DOCDIR@/latex + +endif DX_COND_latex + +.PHONY: doxygen-run doxygen-doc $(DX_PS_GOAL) $(DX_PDF_GOAL) + +.INTERMEDIATE: doxygen-run $(DX_PS_GOAL) $(DX_PDF_GOAL) + +doxygen-run: @DX_DOCDIR@/@PACKAGE@.tag + +doxygen-doc: doxygen-run $(DX_PS_GOAL) $(DX_PDF_GOAL) + +@DX_DOCDIR@/@PACKAGE@.tag: $(DX_CONFIG) $(pkginclude_HEADERS) + rm -rf @DX_DOCDIR@ + $(DX_ENV) $(DX_DOXYGEN) $(srcdir)/$(DX_CONFIG) + +DX_CLEANFILES = \ + @DX_DOCDIR@/@PACKAGE@.tag \ + -r \ + $(DX_CLEAN_HTML) \ + $(DX_CLEAN_CHM) \ + $(DX_CLEAN_CHI) \ + $(DX_CLEAN_MAN) \ + $(DX_CLEAN_RTF) \ + $(DX_CLEAN_XML) \ + $(DX_CLEAN_PS) \ + $(DX_CLEAN_PDF) \ + $(DX_CLEAN_LATEX) + +endif DX_COND_doc diff --git a/configure.ac b/configure.ac index 3dbf73b..e5041c6 100644 --- a/configure.ac +++ b/configure.ac @@ -296,7 +296,7 @@ AC_MSG_CHECKING([for clang sanitizer checks]) AC_ARG_ENABLE([sanitize-checks], [AS_HELP_STRING([--enable-sanitize-checks=address], [(clang/clang++ compilers only) Enable sanitize checks. - Address is useful for detecting issues dealing with + Address is useful for detecting issues dealing with memory. See AddressSanitizer in config/sanitizer/README.md for more information. [default=none] @@ -311,7 +311,7 @@ fi if test "X$CC_BASENAME" = "Xclang"; then AC_SUBST([CLANG_SANITIZE_CHECKS]) - # There are several sanitizer tools. At present we are testing + # There are several sanitizer tools. At present we are testing # and describing only -fsanitizer=address with autotools. case "X-$CLANG_SANITIZE_CHECKS" in X-no|X-none) @@ -328,8 +328,8 @@ if test "X$CC_BASENAME" = "Xclang"; then # The clang compiler doesn't support some of them; they should be # checked before adding them to the list in the help message. # The sanitizers/sanitizers.cmake file lists these options: - # address, memory, memoryWithOrigins, undefined, thread, leak, - # 'address;undefined'. Which and which combinations of these are + # address, memory, memoryWithOrigins, undefined, thread, leak, + # 'address;undefined'. Which and which combinations of these are # supported varies by compiler version, but unsupported options # or combinations will result in configure errors reported in config.log. # Comma separated lists of sanitize options wil be entered intact in @@ -1049,6 +1049,64 @@ if test "X$HDF5_TOOLS" = "Xno"; then fi ## ---------------------------------------------------------------------- +## Check if they would like to enable building doxygen files +## + +## This needs to be exposed for the library info file. +AC_SUBST([HDF5_DOXYGEN]) + +## Default is to build DOXYGEN +HDF5_DOXYGEN=yes + +AC_MSG_CHECKING([if building doxygen is disabled]) + +AC_ARG_ENABLE([doxygen], + [AS_HELP_STRING([--enable-doxygen], + [Compile the HDF5 doxygen files [default=yes]])], + [HDF5_DOXYGEN=$enableval]) + +if test "X$HDF5_DOXYGEN" = "Xyes"; then + DX_DOXYGEN_FEATURE(ON) + DX_DOT_FEATURE(OFF) + DX_HTML_FEATURE(ON) + DX_CHM_FEATURE(OFF) + DX_CHI_FEATURE(OFF) + DX_MAN_FEATURE(OFF) + DX_RTF_FEATURE(OFF) + DX_XML_FEATURE(OFF) + DX_PDF_FEATURE(ON) + DX_PS_FEATURE(OFF) + + AC_SUBST([DOXYGEN_PACKAGE]) + AC_SUBST([DOXYGEN_VERSION_STRING]) + AC_SUBST([DOXYGEN_INCLUDE_ALIASES]) + AC_SUBST([DOXYGEN_PROJECT_LOGO]) + AC_SUBST([DOXYGEN_PROJECT_BRIEF]) + AC_SUBST([DOXYGEN_INPUT_DIRECTORY]) + AC_SUBST([DOXYGEN_OPTIMIZE_OUTPUT_FOR_C]) + AC_SUBST([DOXYGEN_MACRO_EXPANSION]) + AC_SUBST([DOXYGEN_OUTPUT_DIR]) + + DOXYGEN_PACKAGE=${PACKAGE_NAME} + DOXYGEN_VERSION_STRING=${PACKAGE_VERSION} + DOXYGEN_INCLUDE_ALIASES='$(SRCDIR)/doxygen/aliases' + DOXYGEN_PROJECT_LOGO='$(SRCDIR)/doxygen/img/HDFG-logo.png' + DOXYGEN_PROJECT_BRIEF="HDF5 (Hierarchical Data Format 5) Software Library and Utilities" + DOXYGEN_INPUT_DIRECTORY='$(SRCDIR) $(SRCDIR)/doxygen/dox' + DOXYGEN_OPTIMIZE_OUTPUT_FOR_C=YES + DOXYGEN_MACRO_EXPANSION=YES + DOXYGEN_OUTPUT_DIR=hdf5lib_docs + + DX_INIT_DOXYGEN([HDF5], [doxygen/Doxyfile], [hdf5lib_docs]) + + #AC_SUBST([DOXYGEN_OUTPUT_DIR], [hdf5lib_docs]) + +else + AC_MSG_RESULT([no]) +fi + + +## ---------------------------------------------------------------------- ## Create libtool. If shared/static libraries are going to be enabled ## or disabled, it should happen before these macros. LT_PREREQ([2.2]) @@ -3866,6 +3924,7 @@ AM_CONDITIONAL([HAVE_SHARED_CONDITIONAL], [test "X$enable_shared" = "Xyes"]) AC_CONFIG_FILES([src/libhdf5.settings Makefile + doxygen/Doxyfile src/Makefile test/Makefile test/H5srcdir_str.h diff --git a/doxygen/Doxyfile.in b/doxygen/Doxyfile.in new file mode 100644 index 0000000..22a16e9 --- /dev/null +++ b/doxygen/Doxyfile.in @@ -0,0 +1,2542 @@ +# Doxyfile 1.8.18 + +# This file describes the settings to be used by the documentation system +# doxygen (www.doxygen.org) for a project. +# +# All text after a double hash (##) is considered a comment and is placed in +# front of the TAG it is preceding. +# +# All text after a single hash (#) is considered a comment and will be ignored. +# The format is: +# TAG = value [value, ...] +# For lists, items can also be appended using: +# TAG += value [value, ...] +# Values that contain spaces should be placed between quotes (\" \"). + +#--------------------------------------------------------------------------- +# Project related configuration options +#--------------------------------------------------------------------------- + +# This tag specifies the encoding used for all characters in the configuration +# file that follow. The default is UTF-8 which is also the encoding used for all +# text before the first occurrence of this tag. Doxygen uses libiconv (or the +# iconv built into libc) for the transcoding. See +# https://www.gnu.org/software/libiconv/ for the list of possible encodings. +# The default value is: UTF-8. + +DOXYFILE_ENCODING = UTF-8 + +# The PROJECT_NAME tag is a single word (or a sequence of words surrounded by +# double-quotes, unless you are using Doxywizard) that should identify the +# project for which the documentation is generated. This name is used in the +# title of most generated pages and in a few other places. +# The default value is: My Project. + +PROJECT_NAME = @DOXYGEN_PACKAGE@ + +# The PROJECT_NUMBER tag can be used to enter a project or revision number. This +# could be handy for archiving the generated documentation or if some version +# control system is used. + +PROJECT_NUMBER = @DOXYGEN_VERSION_STRING@ + +# Using the PROJECT_BRIEF tag one can provide an optional one line description +# for a project that appears at the top of each page and should give viewer a +# quick idea about the purpose of the project. Keep the description short. + +PROJECT_BRIEF = @DOXYGEN_PROJECT_BRIEF@ + +# With the PROJECT_LOGO tag one can specify a logo or an icon that is included +# in the documentation. The maximum height of the logo should not exceed 55 +# pixels and the maximum width should not exceed 200 pixels. Doxygen will copy +# the logo to the output directory. + +PROJECT_LOGO = @DOXYGEN_PROJECT_LOGO@ + +# The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute) path +# into which the generated documentation will be written. If a relative path is +# entered, it will be relative to the location where doxygen was started. If +# left blank the current directory will be used. + +OUTPUT_DIRECTORY = @DOXYGEN_OUTPUT_DIRECTORY@ + +# If the CREATE_SUBDIRS tag is set to YES then doxygen will create 4096 sub- +# directories (in 2 levels) under the output directory of each output format and +# will distribute the generated files over these directories. Enabling this +# option can be useful when feeding doxygen a huge amount of source files, where +# putting all generated files in the same directory would otherwise causes +# performance problems for the file system. +# The default value is: NO. + +CREATE_SUBDIRS = NO + +# If the ALLOW_UNICODE_NAMES tag is set to YES, doxygen will allow non-ASCII +# characters to appear in the names of generated files. If set to NO, non-ASCII +# characters will be escaped, for example _xE3_x81_x84 will be used for Unicode +# U+3044. +# The default value is: NO. + +ALLOW_UNICODE_NAMES = NO + +# The OUTPUT_LANGUAGE tag is used to specify the language in which all +# documentation generated by doxygen is written. Doxygen will use this +# information to generate all constant output in the proper language. +# Possible values are: Afrikaans, Arabic, Armenian, Brazilian, Catalan, Chinese, +# Chinese-Traditional, Croatian, Czech, Danish, Dutch, English (United States), +# Esperanto, Farsi (Persian), Finnish, French, German, Greek, Hungarian, +# Indonesian, Italian, Japanese, Japanese-en (Japanese with English messages), +# Korean, Korean-en (Korean with English messages), Latvian, Lithuanian, +# Macedonian, Norwegian, Persian (Farsi), Polish, Portuguese, Romanian, Russian, +# Serbian, Serbian-Cyrillic, Slovak, Slovene, Spanish, Swedish, Turkish, +# Ukrainian and Vietnamese. +# The default value is: English. + +OUTPUT_LANGUAGE = English + +# The OUTPUT_TEXT_DIRECTION tag is used to specify the direction in which all +# documentation generated by doxygen is written. Doxygen will use this +# information to generate all generated output in the proper direction. +# Possible values are: None, LTR, RTL and Context. +# The default value is: None. + +OUTPUT_TEXT_DIRECTION = None + +# If the BRIEF_MEMBER_DESC tag is set to YES, doxygen will include brief member +# descriptions after the members that are listed in the file and class +# documentation (similar to Javadoc). Set to NO to disable this. +# The default value is: YES. + +BRIEF_MEMBER_DESC = YES + +# If the REPEAT_BRIEF tag is set to YES, doxygen will prepend the brief +# description of a member or function before the detailed description +# +# Note: If both HIDE_UNDOC_MEMBERS and BRIEF_MEMBER_DESC are set to NO, the +# brief descriptions will be completely suppressed. +# The default value is: YES. + +REPEAT_BRIEF = YES + +# This tag implements a quasi-intelligent brief description abbreviator that is +# used to form the text in various listings. Each string in this list, if found +# as the leading text of the brief description, will be stripped from the text +# and the result, after processing the whole list, is used as the annotated +# text. Otherwise, the brief description is used as-is. If left blank, the +# following values are used ($name is automatically replaced with the name of +# the entity):The $name class, The $name widget, The $name file, is, provides, +# specifies, contains, represents, a, an and the. + +ABBREVIATE_BRIEF = "The $name class" \ + "The $name widget" \ + "The $name file" \ + is \ + provides \ + specifies \ + contains \ + represents \ + a \ + an \ + the + +# If the ALWAYS_DETAILED_SEC and REPEAT_BRIEF tags are both set to YES then +# doxygen will generate a detailed section even if there is only a brief +# description. +# The default value is: NO. + +ALWAYS_DETAILED_SEC = NO + +# If the INLINE_INHERITED_MEMB tag is set to YES, doxygen will show all +# inherited members of a class in the documentation of that class as if those +# members were ordinary class members. Constructors, destructors and assignment +# operators of the base classes will not be shown. +# The default value is: NO. + +INLINE_INHERITED_MEMB = NO + +# If the FULL_PATH_NAMES tag is set to YES, doxygen will prepend the full path +# before files name in the file list and in the header files. If set to NO the +# shortest path that makes the file name unique will be used +# The default value is: YES. + +FULL_PATH_NAMES = YES + +# The STRIP_FROM_PATH tag can be used to strip a user-defined part of the path. +# Stripping is only done if one of the specified strings matches the left-hand +# part of the path. The tag can be used to show relative paths in the file list. +# If left blank the directory from which doxygen is run is used as the path to +# strip. +# +# Note that you can specify absolute paths here, but also relative paths, which +# will be relative from the directory where doxygen is started. +# This tag requires that the tag FULL_PATH_NAMES is set to YES. + +STRIP_FROM_PATH = + +# The STRIP_FROM_INC_PATH tag can be used to strip a user-defined part of the +# path mentioned in the documentation of a class, which tells the reader which +# header file to include in order to use a class. If left blank only the name of +# the header file containing the class definition is used. Otherwise one should +# specify the list of include paths that are normally passed to the compiler +# using the -I flag. + +STRIP_FROM_INC_PATH = + +# If the SHORT_NAMES tag is set to YES, doxygen will generate much shorter (but +# less readable) file names. This can be useful is your file systems doesn't +# support long names like on DOS, Mac, or CD-ROM. +# The default value is: NO. + +SHORT_NAMES = NO + +# If the JAVADOC_AUTOBRIEF tag is set to YES then doxygen will interpret the +# first line (until the first dot) of a Javadoc-style comment as the brief +# description. If set to NO, the Javadoc-style will behave just like regular Qt- +# style comments (thus requiring an explicit @brief command for a brief +# description.) +# The default value is: NO. + +JAVADOC_AUTOBRIEF = NO + +# If the JAVADOC_BANNER tag is set to YES then doxygen will interpret a line +# such as +# /*************** +# as being the beginning of a Javadoc-style comment "banner". If set to NO, the +# Javadoc-style will behave just like regular comments and it will not be +# interpreted by doxygen. +# The default value is: NO. + +JAVADOC_BANNER = NO + +# If the QT_AUTOBRIEF tag is set to YES then doxygen will interpret the first +# line (until the first dot) of a Qt-style comment as the brief description. If +# set to NO, the Qt-style will behave just like regular Qt-style comments (thus +# requiring an explicit \brief command for a brief description.) +# The default value is: NO. + +QT_AUTOBRIEF = NO + +# The MULTILINE_CPP_IS_BRIEF tag can be set to YES to make doxygen treat a +# multi-line C++ special comment block (i.e. a block of //! or /// comments) as +# a brief description. This used to be the default behavior. The new default is +# to treat a multi-line C++ comment block as a detailed description. Set this +# tag to YES if you prefer the old behavior instead. +# +# Note that setting this tag to YES also means that rational rose comments are +# not recognized any more. +# The default value is: NO. + +MULTILINE_CPP_IS_BRIEF = NO + +# If the INHERIT_DOCS tag is set to YES then an undocumented member inherits the +# documentation from any documented member that it re-implements. +# The default value is: YES. + +INHERIT_DOCS = YES + +# If the SEPARATE_MEMBER_PAGES tag is set to YES then doxygen will produce a new +# page for each member. If set to NO, the documentation of a member will be part +# of the file/class/namespace that contains it. +# The default value is: NO. + +SEPARATE_MEMBER_PAGES = NO + +# The TAB_SIZE tag can be used to set the number of spaces in a tab. Doxygen +# uses this value to replace tabs by spaces in code fragments. +# Minimum value: 1, maximum value: 16, default value: 4. + +TAB_SIZE = 4 + +# This tag can be used to specify a number of aliases that act as commands in +# the documentation. An alias has the form: +# name=value +# For example adding +# "sideeffect=@par Side Effects:\n" +# will allow you to put the command \sideeffect (or @sideeffect) in the +# documentation, which will result in a user-defined paragraph with heading +# "Side Effects:". You can put \n's in the value part of an alias to insert +# newlines (in the resulting output). You can put ^^ in the value part of an +# alias to insert a newline as if a physical newline was in the original file. +# When you need a literal { or } or , in the value part of an alias you have to +# escape them by means of a backslash (\), this can lead to conflicts with the +# commands \{ and \} for these it is advised to use the version @{ and @} or use +# a double escape (\\{ and \\}) + +ALIASES = + +# Set the OPTIMIZE_OUTPUT_FOR_C tag to YES if your project consists of C sources +# only. Doxygen will then generate output that is more tailored for C. For +# instance, some of the names that are used will be different. The list of all +# members will be omitted, etc. +# The default value is: NO. + +OPTIMIZE_OUTPUT_FOR_C = YES + +# Set the OPTIMIZE_OUTPUT_JAVA tag to YES if your project consists of Java or +# Python sources only. Doxygen will then generate output that is more tailored +# for that language. For instance, namespaces will be presented as packages, +# qualified scopes will look different, etc. +# The default value is: NO. + +OPTIMIZE_OUTPUT_JAVA = NO + +# Set the OPTIMIZE_FOR_FORTRAN tag to YES if your project consists of Fortran +# sources. Doxygen will then generate output that is tailored for Fortran. +# The default value is: NO. + +OPTIMIZE_FOR_FORTRAN = NO + +# Set the OPTIMIZE_OUTPUT_VHDL tag to YES if your project consists of VHDL +# sources. Doxygen will then generate output that is tailored for VHDL. +# The default value is: NO. + +OPTIMIZE_OUTPUT_VHDL = NO + +# Set the OPTIMIZE_OUTPUT_SLICE tag to YES if your project consists of Slice +# sources only. Doxygen will then generate output that is more tailored for that +# language. For instance, namespaces will be presented as modules, types will be +# separated into more groups, etc. +# The default value is: NO. + +OPTIMIZE_OUTPUT_SLICE = NO + +# Doxygen selects the parser to use depending on the extension of the files it +# parses. With this tag you can assign which parser to use for a given +# extension. Doxygen has a built-in mapping, but you can override or extend it +# using this tag. The format is ext=language, where ext is a file extension, and +# language is one of the parsers supported by doxygen: IDL, Java, JavaScript, +# Csharp (C#), C, C++, D, PHP, md (Markdown), Objective-C, Python, Slice, VHDL, +# Fortran (fixed format Fortran: FortranFixed, free formatted Fortran: +# FortranFree, unknown formatted Fortran: Fortran. In the later case the parser +# tries to guess whether the code is fixed or free formatted code, this is the +# default for Fortran type files). For instance to make doxygen treat .inc files +# as Fortran files (default is PHP), and .f files as C (default is Fortran), +# use: inc=Fortran f=C. +# +# Note: For files without extension you can use no_extension as a placeholder. +# +# Note that for custom extensions you also need to set FILE_PATTERNS otherwise +# the files are not read by doxygen. + +EXTENSION_MAPPING = + +# If the MARKDOWN_SUPPORT tag is enabled then doxygen pre-processes all comments +# according to the Markdown format, which allows for more readable +# documentation. See https://daringfireball.net/projects/markdown/ for details. +# The output of markdown processing is further processed by doxygen, so you can +# mix doxygen, HTML, and XML commands with Markdown formatting. Disable only in +# case of backward compatibilities issues. +# The default value is: YES. + +MARKDOWN_SUPPORT = YES + +# When the TOC_INCLUDE_HEADINGS tag is set to a non-zero value, all headings up +# to that level are automatically included in the table of contents, even if +# they do not have an id attribute. +# Note: This feature currently applies only to Markdown headings. +# Minimum value: 0, maximum value: 99, default value: 5. +# This tag requires that the tag MARKDOWN_SUPPORT is set to YES. + +TOC_INCLUDE_HEADINGS = 5 + +# When enabled doxygen tries to link words that correspond to documented +# classes, or namespaces to their corresponding documentation. Such a link can +# be prevented in individual cases by putting a % sign in front of the word or +# globally by setting AUTOLINK_SUPPORT to NO. +# The default value is: YES. + +AUTOLINK_SUPPORT = YES + +# If you use STL classes (i.e. std::string, std::vector, etc.) but do not want +# to include (a tag file for) the STL sources as input, then you should set this +# tag to YES in order to let doxygen match functions declarations and +# definitions whose arguments contain STL classes (e.g. func(std::string); +# versus func(std::string) {}). This also make the inheritance and collaboration +# diagrams that involve STL classes more complete and accurate. +# The default value is: NO. + +BUILTIN_STL_SUPPORT = NO + +# If you use Microsoft's C++/CLI language, you should set this option to YES to +# enable parsing support. +# The default value is: NO. + +CPP_CLI_SUPPORT = NO + +# Set the SIP_SUPPORT tag to YES if your project consists of sip (see: +# https://www.riverbankcomputing.com/software/sip/intro) sources only. Doxygen +# will parse them like normal C++ but will assume all classes use public instead +# of private inheritance when no explicit protection keyword is present. +# The default value is: NO. + +SIP_SUPPORT = NO + +# For Microsoft's IDL there are propget and propput attributes to indicate +# getter and setter methods for a property. Setting this option to YES will make +# doxygen to replace the get and set methods by a property in the documentation. +# This will only work if the methods are indeed getting or setting a simple +# type. If this is not the case, or you want to show the methods anyway, you +# should set this option to NO. +# The default value is: YES. + +IDL_PROPERTY_SUPPORT = YES + +# If member grouping is used in the documentation and the DISTRIBUTE_GROUP_DOC +# tag is set to YES then doxygen will reuse the documentation of the first +# member in the group (if any) for the other members of the group. By default +# all members of a group must be documented explicitly. +# The default value is: NO. + +DISTRIBUTE_GROUP_DOC = NO + +# If one adds a struct or class to a group and this option is enabled, then also +# any nested class or struct is added to the same group. By default this option +# is disabled and one has to add nested compounds explicitly via \ingroup. +# The default value is: NO. + +GROUP_NESTED_COMPOUNDS = NO + +# Set the SUBGROUPING tag to YES to allow class member groups of the same type +# (for instance a group of public functions) to be put as a subgroup of that +# type (e.g. under the Public Functions section). Set it to NO to prevent +# subgrouping. Alternatively, this can be done per class using the +# \nosubgrouping command. +# The default value is: YES. + +SUBGROUPING = YES + +# When the INLINE_GROUPED_CLASSES tag is set to YES, classes, structs and unions +# are shown inside the group in which they are included (e.g. using \ingroup) +# instead of on a separate page (for HTML and Man pages) or section (for LaTeX +# and RTF). +# +# Note that this feature does not work in combination with +# SEPARATE_MEMBER_PAGES. +# The default value is: NO. + +INLINE_GROUPED_CLASSES = NO + +# When the INLINE_SIMPLE_STRUCTS tag is set to YES, structs, classes, and unions +# with only public data fields or simple typedef fields will be shown inline in +# the documentation of the scope in which they are defined (i.e. file, +# namespace, or group documentation), provided this scope is documented. If set +# to NO, structs, classes, and unions are shown on a separate page (for HTML and +# Man pages) or section (for LaTeX and RTF). +# The default value is: NO. + +INLINE_SIMPLE_STRUCTS = NO + +# When TYPEDEF_HIDES_STRUCT tag is enabled, a typedef of a struct, union, or +# enum is documented as struct, union, or enum with the name of the typedef. So +# typedef struct TypeS {} TypeT, will appear in the documentation as a struct +# with name TypeT. When disabled the typedef will appear as a member of a file, +# namespace, or class. And the struct will be named TypeS. This can typically be +# useful for C code in case the coding convention dictates that all compound +# types are typedef'ed and only the typedef is referenced, never the tag name. +# The default value is: NO. + +TYPEDEF_HIDES_STRUCT = YES + +# The size of the symbol lookup cache can be set using LOOKUP_CACHE_SIZE. This +# cache is used to resolve symbols given their name and scope. Since this can be +# an expensive process and often the same symbol appears multiple times in the +# code, doxygen keeps a cache of pre-resolved symbols. If the cache is too small +# doxygen will become slower. If the cache is too large, memory is wasted. The +# cache size is given by this formula: 2^(16+LOOKUP_CACHE_SIZE). The valid range +# is 0..9, the default is 0, corresponding to a cache size of 2^16=65536 +# symbols. At the end of a run doxygen will report the cache usage and suggest +# the optimal cache size from a speed point of view. +# Minimum value: 0, maximum value: 9, default value: 0. + +LOOKUP_CACHE_SIZE = 0 + +#--------------------------------------------------------------------------- +# Build related configuration options +#--------------------------------------------------------------------------- + +# If the EXTRACT_ALL tag is set to YES, doxygen will assume all entities in +# documentation are documented, even if no documentation was available. Private +# class members and static file members will be hidden unless the +# EXTRACT_PRIVATE respectively EXTRACT_STATIC tags are set to YES. +# Note: This will also disable the warnings about undocumented members that are +# normally produced when WARNINGS is set to YES. +# The default value is: NO. + +EXTRACT_ALL = YES + +# If the EXTRACT_PRIVATE tag is set to YES, all private members of a class will +# be included in the documentation. +# The default value is: NO. + +EXTRACT_PRIVATE = NO + +# If the EXTRACT_PRIV_VIRTUAL tag is set to YES, documented private virtual +# methods of a class will be included in the documentation. +# The default value is: NO. + +EXTRACT_PRIV_VIRTUAL = NO + +# If the EXTRACT_PACKAGE tag is set to YES, all members with package or internal +# scope will be included in the documentation. +# The default value is: NO. + +EXTRACT_PACKAGE = NO + +# If the EXTRACT_STATIC tag is set to YES, all static members of a file will be +# included in the documentation. +# The default value is: NO. + +EXTRACT_STATIC = YES + +# If the EXTRACT_LOCAL_CLASSES tag is set to YES, classes (and structs) defined +# locally in source files will be included in the documentation. If set to NO, +# only classes defined in header files are included. Does not have any effect +# for Java sources. +# The default value is: YES. + +EXTRACT_LOCAL_CLASSES = YES + +# This flag is only useful for Objective-C code. If set to YES, local methods, +# which are defined in the implementation section but not in the interface are +# included in the documentation. If set to NO, only methods in the interface are +# included. +# The default value is: NO. + +EXTRACT_LOCAL_METHODS = NO + +# If this flag is set to YES, the members of anonymous namespaces will be +# extracted and appear in the documentation as a namespace called +# 'anonymous_namespace{file}', where file will be replaced with the base name of +# the file that contains the anonymous namespace. By default anonymous namespace +# are hidden. +# The default value is: NO. + +EXTRACT_ANON_NSPACES = NO + +# If the HIDE_UNDOC_MEMBERS tag is set to YES, doxygen will hide all +# undocumented members inside documented classes or files. If set to NO these +# members will be included in the various overviews, but no documentation +# section is generated. This option has no effect if EXTRACT_ALL is enabled. +# The default value is: NO. + +HIDE_UNDOC_MEMBERS = NO + +# If the HIDE_UNDOC_CLASSES tag is set to YES, doxygen will hide all +# undocumented classes that are normally visible in the class hierarchy. If set +# to NO, these classes will be included in the various overviews. This option +# has no effect if EXTRACT_ALL is enabled. +# The default value is: NO. + +HIDE_UNDOC_CLASSES = NO + +# If the HIDE_FRIEND_COMPOUNDS tag is set to YES, doxygen will hide all friend +# declarations. If set to NO, these declarations will be included in the +# documentation. +# The default value is: NO. + +HIDE_FRIEND_COMPOUNDS = NO + +# If the HIDE_IN_BODY_DOCS tag is set to YES, doxygen will hide any +# documentation blocks found inside the body of a function. If set to NO, these +# blocks will be appended to the function's detailed documentation block. +# The default value is: NO. + +HIDE_IN_BODY_DOCS = NO + +# The INTERNAL_DOCS tag determines if documentation that is typed after a +# \internal command is included. If the tag is set to NO then the documentation +# will be excluded. Set it to YES to include the internal documentation. +# The default value is: NO. + +INTERNAL_DOCS = NO + +# If the CASE_SENSE_NAMES tag is set to NO then doxygen will only generate file +# names in lower-case letters. If set to YES, upper-case letters are also +# allowed. This is useful if you have classes or files whose names only differ +# in case and if your file system supports case sensitive file names. Windows +# (including Cygwin) ands Mac users are advised to set this option to NO. +# The default value is: system dependent. + +CASE_SENSE_NAMES = NO + +# If the HIDE_SCOPE_NAMES tag is set to NO then doxygen will show members with +# their full class and namespace scopes in the documentation. If set to YES, the +# scope will be hidden. +# The default value is: NO. + +HIDE_SCOPE_NAMES = YES + +# If the HIDE_COMPOUND_REFERENCE tag is set to NO (default) then doxygen will +# append additional text to a page's title, such as Class Reference. If set to +# YES the compound reference will be hidden. +# The default value is: NO. + +HIDE_COMPOUND_REFERENCE= NO + +# If the SHOW_INCLUDE_FILES tag is set to YES then doxygen will put a list of +# the files that are included by a file in the documentation of that file. +# The default value is: YES. + +SHOW_INCLUDE_FILES = YES + +# If the SHOW_GROUPED_MEMB_INC tag is set to YES then Doxygen will add for each +# grouped member an include statement to the documentation, telling the reader +# which file to include in order to use the member. +# The default value is: NO. + +SHOW_GROUPED_MEMB_INC = NO + +# If the FORCE_LOCAL_INCLUDES tag is set to YES then doxygen will list include +# files with double quotes in the documentation rather than with sharp brackets. +# The default value is: NO. + +FORCE_LOCAL_INCLUDES = NO + +# If the INLINE_INFO tag is set to YES then a tag [inline] is inserted in the +# documentation for inline members. +# The default value is: YES. + +INLINE_INFO = YES + +# If the SORT_MEMBER_DOCS tag is set to YES then doxygen will sort the +# (detailed) documentation of file and class members alphabetically by member +# name. If set to NO, the members will appear in declaration order. +# The default value is: YES. + +SORT_MEMBER_DOCS = YES + +# If the SORT_BRIEF_DOCS tag is set to YES then doxygen will sort the brief +# descriptions of file, namespace and class members alphabetically by member +# name. If set to NO, the members will appear in declaration order. Note that +# this will also influence the order of the classes in the class list. +# The default value is: NO. + +SORT_BRIEF_DOCS = NO + +# If the SORT_MEMBERS_CTORS_1ST tag is set to YES then doxygen will sort the +# (brief and detailed) documentation of class members so that constructors and +# destructors are listed first. If set to NO the constructors will appear in the +# respective orders defined by SORT_BRIEF_DOCS and SORT_MEMBER_DOCS. +# Note: If SORT_BRIEF_DOCS is set to NO this option is ignored for sorting brief +# member documentation. +# Note: If SORT_MEMBER_DOCS is set to NO this option is ignored for sorting +# detailed member documentation. +# The default value is: NO. + +SORT_MEMBERS_CTORS_1ST = NO + +# If the SORT_GROUP_NAMES tag is set to YES then doxygen will sort the hierarchy +# of group names into alphabetical order. If set to NO the group names will +# appear in their defined order. +# The default value is: NO. + +SORT_GROUP_NAMES = YES + +# If the SORT_BY_SCOPE_NAME tag is set to YES, the class list will be sorted by +# fully-qualified names, including namespaces. If set to NO, the class list will +# be sorted only by class name, not including the namespace part. +# Note: This option is not very useful if HIDE_SCOPE_NAMES is set to YES. +# Note: This option applies only to the class list, not to the alphabetical +# list. +# The default value is: NO. + +SORT_BY_SCOPE_NAME = NO + +# If the STRICT_PROTO_MATCHING option is enabled and doxygen fails to do proper +# type resolution of all parameters of a function it will reject a match between +# the prototype and the implementation of a member function even if there is +# only one candidate or it is obvious which candidate to choose by doing a +# simple string match. By disabling STRICT_PROTO_MATCHING doxygen will still +# accept a match between prototype and implementation in such cases. +# The default value is: NO. + +STRICT_PROTO_MATCHING = NO + +# The GENERATE_TODOLIST tag can be used to enable (YES) or disable (NO) the todo +# list. This list is created by putting \todo commands in the documentation. +# The default value is: YES. + +GENERATE_TODOLIST = YES + +# The GENERATE_TESTLIST tag can be used to enable (YES) or disable (NO) the test +# list. This list is created by putting \test commands in the documentation. +# The default value is: YES. + +GENERATE_TESTLIST = YES + +# The GENERATE_BUGLIST tag can be used to enable (YES) or disable (NO) the bug +# list. This list is created by putting \bug commands in the documentation. +# The default value is: YES. + +GENERATE_BUGLIST = YES + +# The GENERATE_DEPRECATEDLIST tag can be used to enable (YES) or disable (NO) +# the deprecated list. This list is created by putting \deprecated commands in +# the documentation. +# The default value is: YES. + +GENERATE_DEPRECATEDLIST= YES + +# The ENABLED_SECTIONS tag can be used to enable conditional documentation +# sections, marked by \if <section_label> ... \endif and \cond <section_label> +# ... \endcond blocks. + +ENABLED_SECTIONS = + +# The MAX_INITIALIZER_LINES tag determines the maximum number of lines that the +# initial value of a variable or macro / define can have for it to appear in the +# documentation. If the initializer consists of more lines than specified here +# it will be hidden. Use a value of 0 to hide initializers completely. The +# appearance of the value of individual variables and macros / defines can be +# controlled using \showinitializer or \hideinitializer command in the +# documentation regardless of this setting. +# Minimum value: 0, maximum value: 10000, default value: 30. + +MAX_INITIALIZER_LINES = 30 + +# Set the SHOW_USED_FILES tag to NO to disable the list of files generated at +# the bottom of the documentation of classes and structs. If set to YES, the +# list will mention the files that were used to generate the documentation. +# The default value is: YES. + +SHOW_USED_FILES = YES + +# Set the SHOW_FILES tag to NO to disable the generation of the Files page. This +# will remove the Files entry from the Quick Index and from the Folder Tree View +# (if specified). +# The default value is: YES. + +SHOW_FILES = YES + +# Set the SHOW_NAMESPACES tag to NO to disable the generation of the Namespaces +# page. This will remove the Namespaces entry from the Quick Index and from the +# Folder Tree View (if specified). +# The default value is: YES. + +SHOW_NAMESPACES = YES + +# The FILE_VERSION_FILTER tag can be used to specify a program or script that +# doxygen should invoke to get the current version for each file (typically from +# the version control system). Doxygen will invoke the program by executing (via +# popen()) the command command input-file, where command is the value of the +# FILE_VERSION_FILTER tag, and input-file is the name of an input file provided +# by doxygen. Whatever the program writes to standard output is used as the file +# version. For an example see the documentation. + +FILE_VERSION_FILTER = + +# The LAYOUT_FILE tag can be used to specify a layout file which will be parsed +# by doxygen. The layout file controls the global structure of the generated +# output files in an output format independent way. To create the layout file +# that represents doxygen's defaults, run doxygen with the -l option. You can +# optionally specify a file name after the option, if omitted DoxygenLayout.xml +# will be used as the name of the layout file. +# +# Note that if you run doxygen from a directory containing a file called +# DoxygenLayout.xml, doxygen will parse it automatically even if the LAYOUT_FILE +# tag is left empty. + +LAYOUT_FILE = + +# The CITE_BIB_FILES tag can be used to specify one or more bib files containing +# the reference definitions. This must be a list of .bib files. The .bib +# extension is automatically appended if omitted. This requires the bibtex tool +# to be installed. See also https://en.wikipedia.org/wiki/BibTeX for more info. +# For LaTeX the style of the bibliography can be controlled using +# LATEX_BIB_STYLE. To use this feature you need bibtex and perl available in the +# search path. See also \cite for info how to create references. + +CITE_BIB_FILES = + +#--------------------------------------------------------------------------- +# Configuration options related to warning and progress messages +#--------------------------------------------------------------------------- + +# The QUIET tag can be used to turn on/off the messages that are generated to +# standard output by doxygen. If QUIET is set to YES this implies that the +# messages are off. +# The default value is: NO. + +QUIET = NO + +# The WARNINGS tag can be used to turn on/off the warning messages that are +# generated to standard error (stderr) by doxygen. If WARNINGS is set to YES +# this implies that the warnings are on. +# +# Tip: Turn warnings on while writing the documentation. +# The default value is: YES. + +WARNINGS = YES + +# If the WARN_IF_UNDOCUMENTED tag is set to YES then doxygen will generate +# warnings for undocumented members. If EXTRACT_ALL is set to YES then this flag +# will automatically be disabled. +# The default value is: YES. + +WARN_IF_UNDOCUMENTED = YES + +# If the WARN_IF_DOC_ERROR tag is set to YES, doxygen will generate warnings for +# potential errors in the documentation, such as not documenting some parameters +# in a documented function, or documenting parameters that don't exist or using +# markup commands wrongly. +# The default value is: YES. + +WARN_IF_DOC_ERROR = YES + +# This WARN_NO_PARAMDOC option can be enabled to get warnings for functions that +# are documented, but have no documentation for their parameters or return +# value. If set to NO, doxygen will only warn about wrong or incomplete +# parameter documentation, but not about the absence of documentation. If +# EXTRACT_ALL is set to YES then this flag will automatically be disabled. +# The default value is: NO. + +WARN_NO_PARAMDOC = NO + +# If the WARN_AS_ERROR tag is set to YES then doxygen will immediately stop when +# a warning is encountered. +# The default value is: NO. + +WARN_AS_ERROR = NO + +# The WARN_FORMAT tag determines the format of the warning messages that doxygen +# can produce. The string should contain the $file, $line, and $text tags, which +# will be replaced by the file and line number from which the warning originated +# and the warning text. Optionally the format may contain $version, which will +# be replaced by the version of the file (if it could be obtained via +# FILE_VERSION_FILTER) +# The default value is: $file:$line: $text. + +WARN_FORMAT = "$file:$line: $text" + +# The WARN_LOGFILE tag can be used to specify a file to which warning and error +# messages should be written. If left blank the output is written to standard +# error (stderr). + +WARN_LOGFILE = + +#--------------------------------------------------------------------------- +# Configuration options related to the input files +#--------------------------------------------------------------------------- + +# The INPUT tag is used to specify the files and/or directories that contain +# documented source files. You may enter file names like myfile.cpp or +# directories like /usr/src/myproject. Separate the files or directories with +# spaces. See also FILE_PATTERNS and EXTENSION_MAPPING +# Note: If this tag is empty the current directory is searched. + +INPUT = @DOXYGEN_INPUT_DIRECTORY@ + +# This tag can be used to specify the character encoding of the source files +# that doxygen parses. Internally doxygen uses the UTF-8 encoding. Doxygen uses +# libiconv (or the iconv built into libc) for the transcoding. See the libiconv +# documentation (see: https://www.gnu.org/software/libiconv/) for the list of +# possible encodings. +# The default value is: UTF-8. + +INPUT_ENCODING = UTF-8 + +# If the value of the INPUT tag contains directories, you can use the +# FILE_PATTERNS tag to specify one or more wildcard patterns (like *.cpp and +# *.h) to filter out the source-files in the directories. +# +# Note that for custom extensions or not directly supported extensions you also +# need to set EXTENSION_MAPPING for the extension otherwise the files are not +# read by doxygen. +# +# If left blank the following patterns are tested:*.c, *.cc, *.cxx, *.cpp, +# *.c++, *.java, *.ii, *.ixx, *.ipp, *.i++, *.inl, *.idl, *.ddl, *.odl, *.h, +# *.hh, *.hxx, *.hpp, *.h++, *.cs, *.d, *.php, *.php4, *.php5, *.phtml, *.inc, +# *.m, *.markdown, *.md, *.mm, *.dox (to be provided as doxygen C comment), +# *.doc (to be provided as doxygen C comment), *.txt (to be provided as doxygen +# C comment), *.py, *.pyw, *.f90, *.f95, *.f03, *.f08, *.f18, *.f, *.for, *.vhd, +# *.vhdl, *.ucf, *.qsf and *.ice. + +FILE_PATTERNS = H5*public.h \ + H5*module.h \ + H5VLconnector.h \ + H5VLconnector_passthru.h \ + H5VLnative.h \ + H5version.h \ + *.dox + +# The RECURSIVE tag can be used to specify whether or not subdirectories should +# be searched for input files as well. +# The default value is: NO. + +RECURSIVE = YES + +# The EXCLUDE tag can be used to specify files and/or directories that should be +# excluded from the INPUT source files. This way you can easily exclude a +# subdirectory from a directory tree whose root is specified with the INPUT tag. +# +# Note that relative paths are relative to the directory from which doxygen is +# run. + +EXCLUDE = examples + +# The EXCLUDE_SYMLINKS tag can be used to select whether or not files or +# directories that are symbolic links (a Unix file system feature) are excluded +# from the input. +# The default value is: NO. + +EXCLUDE_SYMLINKS = NO + +# If the value of the INPUT tag contains directories, you can use the +# EXCLUDE_PATTERNS tag to specify one or more wildcard patterns to exclude +# certain files from those directories. +# +# Note that the wildcards are matched against the file with absolute path, so to +# exclude all test directories for example use the pattern */test/* + +EXCLUDE_PATTERNS = + +# The EXCLUDE_SYMBOLS tag can be used to specify one or more symbol names +# (namespaces, classes, functions, etc.) that should be excluded from the +# output. The symbol name can be a fully qualified name, a word, or if the +# wildcard * is used, a substring. Examples: ANamespace, AClass, +# AClass::ANamespace, ANamespace::*Test +# +# Note that the wildcards are matched against the file with absolute path, so to +# exclude all test directories use the pattern */test/* + +EXCLUDE_SYMBOLS = + +# The EXAMPLE_PATH tag can be used to specify one or more files or directories +# that contain example code fragments that are included (see the \include +# command). + +EXAMPLE_PATH = ../src ../examples ../test examples + +# If the value of the EXAMPLE_PATH tag contains directories, you can use the +# EXAMPLE_PATTERNS tag to specify one or more wildcard pattern (like *.cpp and +# *.h) to filter out the source-files in the directories. If left blank all +# files are included. + +EXAMPLE_PATTERNS = *.c + +# If the EXAMPLE_RECURSIVE tag is set to YES then subdirectories will be +# searched for input files to be used with the \include or \dontinclude commands +# irrespective of the value of the RECURSIVE tag. +# The default value is: NO. + +EXAMPLE_RECURSIVE = NO + +# The IMAGE_PATH tag can be used to specify one or more files or directories +# that contain images that are to be included in the documentation (see the +# \image command). + +IMAGE_PATH = + +# The INPUT_FILTER tag can be used to specify a program that doxygen should +# invoke to filter for each input file. Doxygen will invoke the filter program +# by executing (via popen()) the command: +# +# <filter> <input-file> +# +# where <filter> is the value of the INPUT_FILTER tag, and <input-file> is the +# name of an input file. Doxygen will then use the output that the filter +# program writes to standard output. If FILTER_PATTERNS is specified, this tag +# will be ignored. +# +# Note that the filter must not add or remove lines; it is applied before the +# code is scanned, but not when the output code is generated. If lines are added +# or removed, the anchors will not be placed correctly. +# +# Note that for custom extensions or not directly supported extensions you also +# need to set EXTENSION_MAPPING for the extension otherwise the files are not +# properly processed by doxygen. + +INPUT_FILTER = + +# The FILTER_PATTERNS tag can be used to specify filters on a per file pattern +# basis. Doxygen will compare the file name with each pattern and apply the +# filter if there is a match. The filters are a list of the form: pattern=filter +# (like *.cpp=my_cpp_filter). See INPUT_FILTER for further information on how +# filters are used. If the FILTER_PATTERNS tag is empty or if none of the +# patterns match the file name, INPUT_FILTER is applied. +# +# Note that for custom extensions or not directly supported extensions you also +# need to set EXTENSION_MAPPING for the extension otherwise the files are not +# properly processed by doxygen. + +FILTER_PATTERNS = + +# If the FILTER_SOURCE_FILES tag is set to YES, the input filter (if set using +# INPUT_FILTER) will also be used to filter the input files that are used for +# producing the source files to browse (i.e. when SOURCE_BROWSER is set to YES). +# The default value is: NO. + +FILTER_SOURCE_FILES = NO + +# The FILTER_SOURCE_PATTERNS tag can be used to specify source filters per file +# pattern. A pattern will override the setting for FILTER_PATTERN (if any) and +# it is also possible to disable source filtering for a specific pattern using +# *.ext= (so without naming a filter). +# This tag requires that the tag FILTER_SOURCE_FILES is set to YES. + +FILTER_SOURCE_PATTERNS = + +# If the USE_MDFILE_AS_MAINPAGE tag refers to the name of a markdown file that +# is part of the input, its contents will be placed on the main page +# (index.html). This can be useful if you have a project on for instance GitHub +# and want to reuse the introduction page also for the doxygen output. + +USE_MDFILE_AS_MAINPAGE = + +#--------------------------------------------------------------------------- +# Configuration options related to source browsing +#--------------------------------------------------------------------------- + +# If the SOURCE_BROWSER tag is set to YES then a list of source files will be +# generated. Documented entities will be cross-referenced with these sources. +# +# Note: To get rid of all source code in the generated output, make sure that +# also VERBATIM_HEADERS is set to NO. +# The default value is: NO. + +SOURCE_BROWSER = NO + +# Setting the INLINE_SOURCES tag to YES will include the body of functions, +# classes and enums directly into the documentation. +# The default value is: NO. + +INLINE_SOURCES = NO + +# Setting the STRIP_CODE_COMMENTS tag to YES will instruct doxygen to hide any +# special comment blocks from generated source code fragments. Normal C, C++ and +# Fortran comments will always remain visible. +# The default value is: YES. + +STRIP_CODE_COMMENTS = YES + +# If the REFERENCED_BY_RELATION tag is set to YES then for each documented +# entity all documented functions referencing it will be listed. +# The default value is: NO. + +REFERENCED_BY_RELATION = NO + +# If the REFERENCES_RELATION tag is set to YES then for each documented function +# all documented entities called/used by that function will be listed. +# The default value is: NO. + +REFERENCES_RELATION = NO + +# If the REFERENCES_LINK_SOURCE tag is set to YES and SOURCE_BROWSER tag is set +# to YES then the hyperlinks from functions in REFERENCES_RELATION and +# REFERENCED_BY_RELATION lists will link to the source code. Otherwise they will +# link to the documentation. +# The default value is: YES. + +REFERENCES_LINK_SOURCE = NO + +# If SOURCE_TOOLTIPS is enabled (the default) then hovering a hyperlink in the +# source code will show a tooltip with additional information such as prototype, +# brief description and links to the definition and documentation. Since this +# will make the HTML file larger and loading of large files a bit slower, you +# can opt to disable this feature. +# The default value is: YES. +# This tag requires that the tag SOURCE_BROWSER is set to YES. + +SOURCE_TOOLTIPS = YES + +# If the USE_HTAGS tag is set to YES then the references to source code will +# point to the HTML generated by the htags(1) tool instead of doxygen built-in +# source browser. The htags tool is part of GNU's global source tagging system +# (see https://www.gnu.org/software/global/global.html). You will need version +# 4.8.6 or higher. +# +# To use it do the following: +# - Install the latest version of global +# - Enable SOURCE_BROWSER and USE_HTAGS in the configuration file +# - Make sure the INPUT points to the root of the source tree +# - Run doxygen as normal +# +# Doxygen will invoke htags (and that will in turn invoke gtags), so these +# tools must be available from the command line (i.e. in the search path). +# +# The result: instead of the source browser generated by doxygen, the links to +# source code will now point to the output of htags. +# The default value is: NO. +# This tag requires that the tag SOURCE_BROWSER is set to YES. + +USE_HTAGS = NO + +# If the VERBATIM_HEADERS tag is set the YES then doxygen will generate a +# verbatim copy of the header file for each class for which an include is +# specified. Set to NO to disable this. +# See also: Section \class. +# The default value is: YES. + +VERBATIM_HEADERS = NO + +# If the CLANG_ASSISTED_PARSING tag is set to YES then doxygen will use the +# clang parser (see: http://clang.llvm.org/) for more accurate parsing at the +# cost of reduced performance. This can be particularly helpful with template +# rich C++ code for which doxygen's built-in parser lacks the necessary type +# information. +# Note: The availability of this option depends on whether or not doxygen was +# generated with the -Duse_libclang=ON option for CMake. +# The default value is: NO. + +CLANG_ASSISTED_PARSING = NO + +# If clang assisted parsing is enabled you can provide the compiler with command +# line options that you would normally use when invoking the compiler. Note that +# the include paths will already be set by doxygen for the files and directories +# specified with INPUT and INCLUDE_PATH. +# This tag requires that the tag CLANG_ASSISTED_PARSING is set to YES. + +CLANG_OPTIONS = + +# If clang assisted parsing is enabled you can provide the clang parser with the +# path to the compilation database (see: +# http://clang.llvm.org/docs/HowToSetupToolingForLLVM.html) used when the files +# were built. This is equivalent to specifying the "-p" option to a clang tool, +# such as clang-check. These options will then be passed to the parser. +# Note: The availability of this option depends on whether or not doxygen was +# generated with the -Duse_libclang=ON option for CMake. + +CLANG_DATABASE_PATH = + +#--------------------------------------------------------------------------- +# Configuration options related to the alphabetical class index +#--------------------------------------------------------------------------- + +# If the ALPHABETICAL_INDEX tag is set to YES, an alphabetical index of all +# compounds will be generated. Enable this if the project contains a lot of +# classes, structs, unions or interfaces. +# The default value is: YES. + +ALPHABETICAL_INDEX = YES + +# The COLS_IN_ALPHA_INDEX tag can be used to specify the number of columns in +# which the alphabetical index list will be split. +# Minimum value: 1, maximum value: 20, default value: 5. +# This tag requires that the tag ALPHABETICAL_INDEX is set to YES. + +COLS_IN_ALPHA_INDEX = 5 + +# In case all classes in a project start with a common prefix, all classes will +# be put under the same header in the alphabetical index. The IGNORE_PREFIX tag +# can be used to specify a prefix (or a list of prefixes) that should be ignored +# while generating the index headers. +# This tag requires that the tag ALPHABETICAL_INDEX is set to YES. + +IGNORE_PREFIX = H5 + +#--------------------------------------------------------------------------- +# Configuration options related to the HTML output +#--------------------------------------------------------------------------- + +# If the GENERATE_HTML tag is set to YES, doxygen will generate HTML output +# The default value is: YES. + +GENERATE_HTML = YES + +# The HTML_OUTPUT tag is used to specify where the HTML docs will be put. If a +# relative path is entered the value of OUTPUT_DIRECTORY will be put in front of +# it. +# The default directory is: html. +# This tag requires that the tag GENERATE_HTML is set to YES. + +HTML_OUTPUT = html + +# The HTML_FILE_EXTENSION tag can be used to specify the file extension for each +# generated HTML page (for example: .htm, .php, .asp). +# The default value is: .html. +# This tag requires that the tag GENERATE_HTML is set to YES. + +HTML_FILE_EXTENSION = .html + +# The HTML_HEADER tag can be used to specify a user-defined HTML header file for +# each generated HTML page. If the tag is left blank doxygen will generate a +# standard header. +# +# To get valid HTML the header file that includes any scripts and style sheets +# that doxygen needs, which is dependent on the configuration options used (e.g. +# the setting GENERATE_TREEVIEW). It is highly recommended to start with a +# default header using +# doxygen -w html new_header.html new_footer.html new_stylesheet.css +# YourConfigFile +# and then modify the file new_header.html. See also section "Doxygen usage" +# for information on how to generate the default header that doxygen normally +# uses. +# Note: The header is subject to change so you typically have to regenerate the +# default header when upgrading to a newer version of doxygen. For a description +# of the possible markers and block names see the documentation. +# This tag requires that the tag GENERATE_HTML is set to YES. + +HTML_HEADER = + +# The HTML_FOOTER tag can be used to specify a user-defined HTML footer for each +# generated HTML page. If the tag is left blank doxygen will generate a standard +# footer. See HTML_HEADER for more information on how to generate a default +# footer and what special commands can be used inside the footer. See also +# section "Doxygen usage" for information on how to generate the default footer +# that doxygen normally uses. +# This tag requires that the tag GENERATE_HTML is set to YES. + +HTML_FOOTER = + +# The HTML_STYLESHEET tag can be used to specify a user-defined cascading style +# sheet that is used by each HTML page. It can be used to fine-tune the look of +# the HTML output. If left blank doxygen will generate a default style sheet. +# See also section "Doxygen usage" for information on how to generate the style +# sheet that doxygen normally uses. +# Note: It is recommended to use HTML_EXTRA_STYLESHEET instead of this tag, as +# it is more robust and this tag (HTML_STYLESHEET) will in the future become +# obsolete. +# This tag requires that the tag GENERATE_HTML is set to YES. + +HTML_STYLESHEET = + +# The HTML_EXTRA_STYLESHEET tag can be used to specify additional user-defined +# cascading style sheets that are included after the standard style sheets +# created by doxygen. Using this option one can overrule certain style aspects. +# This is preferred over using HTML_STYLESHEET since it does not replace the +# standard style sheet and is therefore more robust against future updates. +# Doxygen will copy the style sheet files to the output directory. +# Note: The order of the extra style sheet files is of importance (e.g. the last +# style sheet in the list overrules the setting of the previous ones in the +# list). For an example see the documentation. +# This tag requires that the tag GENERATE_HTML is set to YES. + +HTML_EXTRA_STYLESHEET = + +# The HTML_EXTRA_FILES tag can be used to specify one or more extra images or +# other source files which should be copied to the HTML output directory. Note +# that these files will be copied to the base HTML output directory. Use the +# $relpath^ marker in the HTML_HEADER and/or HTML_FOOTER files to load these +# files. In the HTML_STYLESHEET file, use the file name only. Also note that the +# files will be copied as-is; there are no commands or markers available. +# This tag requires that the tag GENERATE_HTML is set to YES. + +HTML_EXTRA_FILES = + +# The HTML_COLORSTYLE_HUE tag controls the color of the HTML output. Doxygen +# will adjust the colors in the style sheet and background images according to +# this color. Hue is specified as an angle on a colorwheel, see +# https://en.wikipedia.org/wiki/Hue for more information. For instance the value +# 0 represents red, 60 is yellow, 120 is green, 180 is cyan, 240 is blue, 300 +# purple, and 360 is red again. +# Minimum value: 0, maximum value: 359, default value: 220. +# This tag requires that the tag GENERATE_HTML is set to YES. + +HTML_COLORSTYLE_HUE = 220 + +# The HTML_COLORSTYLE_SAT tag controls the purity (or saturation) of the colors +# in the HTML output. For a value of 0 the output will use grayscales only. A +# value of 255 will produce the most vivid colors. +# Minimum value: 0, maximum value: 255, default value: 100. +# This tag requires that the tag GENERATE_HTML is set to YES. + +HTML_COLORSTYLE_SAT = 100 + +# The HTML_COLORSTYLE_GAMMA tag controls the gamma correction applied to the +# luminance component of the colors in the HTML output. Values below 100 +# gradually make the output lighter, whereas values above 100 make the output +# darker. The value divided by 100 is the actual gamma applied, so 80 represents +# a gamma of 0.8, The value 220 represents a gamma of 2.2, and 100 does not +# change the gamma. +# Minimum value: 40, maximum value: 240, default value: 80. +# This tag requires that the tag GENERATE_HTML is set to YES. + +HTML_COLORSTYLE_GAMMA = 80 + +# If the HTML_TIMESTAMP tag is set to YES then the footer of each generated HTML +# page will contain the date and time when the page was generated. Setting this +# to YES can help to show when doxygen was last run and thus if the +# documentation is up to date. +# The default value is: NO. +# This tag requires that the tag GENERATE_HTML is set to YES. + +HTML_TIMESTAMP = YES + +# If the HTML_DYNAMIC_MENUS tag is set to YES then the generated HTML +# documentation will contain a main index with vertical navigation menus that +# are dynamically created via JavaScript. If disabled, the navigation index will +# consists of multiple levels of tabs that are statically embedded in every HTML +# page. Disable this option to support browsers that do not have JavaScript, +# like the Qt help browser. +# The default value is: YES. +# This tag requires that the tag GENERATE_HTML is set to YES. + +HTML_DYNAMIC_MENUS = NO + +# If the HTML_DYNAMIC_SECTIONS tag is set to YES then the generated HTML +# documentation will contain sections that can be hidden and shown after the +# page has loaded. +# The default value is: NO. +# This tag requires that the tag GENERATE_HTML is set to YES. + +HTML_DYNAMIC_SECTIONS = NO + +# With HTML_INDEX_NUM_ENTRIES one can control the preferred number of entries +# shown in the various tree structured indices initially; the user can expand +# and collapse entries dynamically later on. Doxygen will expand the tree to +# such a level that at most the specified number of entries are visible (unless +# a fully collapsed tree already exceeds this amount). So setting the number of +# entries 1 will produce a full collapsed tree by default. 0 is a special value +# representing an infinite number of entries and will result in a full expanded +# tree by default. +# Minimum value: 0, maximum value: 9999, default value: 100. +# This tag requires that the tag GENERATE_HTML is set to YES. + +HTML_INDEX_NUM_ENTRIES = 100 + +# If the GENERATE_DOCSET tag is set to YES, additional index files will be +# generated that can be used as input for Apple's Xcode 3 integrated development +# environment (see: https://developer.apple.com/xcode/), introduced with OSX +# 10.5 (Leopard). To create a documentation set, doxygen will generate a +# Makefile in the HTML output directory. Running make will produce the docset in +# that directory and running make install will install the docset in +# ~/Library/Developer/Shared/Documentation/DocSets so that Xcode will find it at +# startup. See https://developer.apple.com/library/archive/featuredarticles/Doxy +# genXcode/_index.html for more information. +# The default value is: NO. +# This tag requires that the tag GENERATE_HTML is set to YES. + +GENERATE_DOCSET = NO + +# This tag determines the name of the docset feed. A documentation feed provides +# an umbrella under which multiple documentation sets from a single provider +# (such as a company or product suite) can be grouped. +# The default value is: Doxygen generated docs. +# This tag requires that the tag GENERATE_DOCSET is set to YES. + +DOCSET_FEEDNAME = "Doxygen generated docs" + +# This tag specifies a string that should uniquely identify the documentation +# set bundle. This should be a reverse domain-name style string, e.g. +# com.mycompany.MyDocSet. Doxygen will append .docset to the name. +# The default value is: org.doxygen.Project. +# This tag requires that the tag GENERATE_DOCSET is set to YES. + +DOCSET_BUNDLE_ID = org.doxygen.Project + +# The DOCSET_PUBLISHER_ID tag specifies a string that should uniquely identify +# the documentation publisher. This should be a reverse domain-name style +# string, e.g. com.mycompany.MyDocSet.documentation. +# The default value is: org.doxygen.Publisher. +# This tag requires that the tag GENERATE_DOCSET is set to YES. + +DOCSET_PUBLISHER_ID = org.doxygen.Publisher + +# The DOCSET_PUBLISHER_NAME tag identifies the documentation publisher. +# The default value is: Publisher. +# This tag requires that the tag GENERATE_DOCSET is set to YES. + +DOCSET_PUBLISHER_NAME = Publisher + +# If the GENERATE_HTMLHELP tag is set to YES then doxygen generates three +# additional HTML index files: index.hhp, index.hhc, and index.hhk. The +# index.hhp is a project file that can be read by Microsoft's HTML Help Workshop +# (see: https://www.microsoft.com/en-us/download/details.aspx?id=21138) on +# Windows. +# +# The HTML Help Workshop contains a compiler that can convert all HTML output +# generated by doxygen into a single compiled HTML file (.chm). Compiled HTML +# files are now used as the Windows 98 help format, and will replace the old +# Windows help format (.hlp) on all Windows platforms in the future. Compressed +# HTML files also contain an index, a table of contents, and you can search for +# words in the documentation. The HTML workshop also contains a viewer for +# compressed HTML files. +# The default value is: NO. +# This tag requires that the tag GENERATE_HTML is set to YES. + +GENERATE_HTMLHELP = NO + +# The CHM_FILE tag can be used to specify the file name of the resulting .chm +# file. You can add a path in front of the file if the result should not be +# written to the html output directory. +# This tag requires that the tag GENERATE_HTMLHELP is set to YES. + +CHM_FILE = + +# The HHC_LOCATION tag can be used to specify the location (absolute path +# including file name) of the HTML help compiler (hhc.exe). If non-empty, +# doxygen will try to run the HTML help compiler on the generated index.hhp. +# The file has to be specified with full path. +# This tag requires that the tag GENERATE_HTMLHELP is set to YES. + +HHC_LOCATION = + +# The GENERATE_CHI flag controls if a separate .chi index file is generated +# (YES) or that it should be included in the master .chm file (NO). +# The default value is: NO. +# This tag requires that the tag GENERATE_HTMLHELP is set to YES. + +GENERATE_CHI = NO + +# The CHM_INDEX_ENCODING is used to encode HtmlHelp index (hhk), content (hhc) +# and project file content. +# This tag requires that the tag GENERATE_HTMLHELP is set to YES. + +CHM_INDEX_ENCODING = + +# The BINARY_TOC flag controls whether a binary table of contents is generated +# (YES) or a normal table of contents (NO) in the .chm file. Furthermore it +# enables the Previous and Next buttons. +# The default value is: NO. +# This tag requires that the tag GENERATE_HTMLHELP is set to YES. + +BINARY_TOC = NO + +# The TOC_EXPAND flag can be set to YES to add extra items for group members to +# the table of contents of the HTML help documentation and to the tree view. +# The default value is: NO. +# This tag requires that the tag GENERATE_HTMLHELP is set to YES. + +TOC_EXPAND = NO + +# If the GENERATE_QHP tag is set to YES and both QHP_NAMESPACE and +# QHP_VIRTUAL_FOLDER are set, an additional index file will be generated that +# can be used as input for Qt's qhelpgenerator to generate a Qt Compressed Help +# (.qch) of the generated HTML documentation. +# The default value is: NO. +# This tag requires that the tag GENERATE_HTML is set to YES. + +GENERATE_QHP = NO + +# If the QHG_LOCATION tag is specified, the QCH_FILE tag can be used to specify +# the file name of the resulting .qch file. The path specified is relative to +# the HTML output folder. +# This tag requires that the tag GENERATE_QHP is set to YES. + +QCH_FILE = + +# The QHP_NAMESPACE tag specifies the namespace to use when generating Qt Help +# Project output. For more information please see Qt Help Project / Namespace +# (see: https://doc.qt.io/archives/qt-4.8/qthelpproject.html#namespace). +# The default value is: org.doxygen.Project. +# This tag requires that the tag GENERATE_QHP is set to YES. + +QHP_NAMESPACE = org.doxygen.Project + +# The QHP_VIRTUAL_FOLDER tag specifies the namespace to use when generating Qt +# Help Project output. For more information please see Qt Help Project / Virtual +# Folders (see: https://doc.qt.io/archives/qt-4.8/qthelpproject.html#virtual- +# folders). +# The default value is: doc. +# This tag requires that the tag GENERATE_QHP is set to YES. + +QHP_VIRTUAL_FOLDER = doc + +# If the QHP_CUST_FILTER_NAME tag is set, it specifies the name of a custom +# filter to add. For more information please see Qt Help Project / Custom +# Filters (see: https://doc.qt.io/archives/qt-4.8/qthelpproject.html#custom- +# filters). +# This tag requires that the tag GENERATE_QHP is set to YES. + +QHP_CUST_FILTER_NAME = + +# The QHP_CUST_FILTER_ATTRS tag specifies the list of the attributes of the +# custom filter to add. For more information please see Qt Help Project / Custom +# Filters (see: https://doc.qt.io/archives/qt-4.8/qthelpproject.html#custom- +# filters). +# This tag requires that the tag GENERATE_QHP is set to YES. + +QHP_CUST_FILTER_ATTRS = + +# The QHP_SECT_FILTER_ATTRS tag specifies the list of the attributes this +# project's filter section matches. Qt Help Project / Filter Attributes (see: +# https://doc.qt.io/archives/qt-4.8/qthelpproject.html#filter-attributes). +# This tag requires that the tag GENERATE_QHP is set to YES. + +QHP_SECT_FILTER_ATTRS = + +# The QHG_LOCATION tag can be used to specify the location of Qt's +# qhelpgenerator. If non-empty doxygen will try to run qhelpgenerator on the +# generated .qhp file. +# This tag requires that the tag GENERATE_QHP is set to YES. + +QHG_LOCATION = + +# If the GENERATE_ECLIPSEHELP tag is set to YES, additional index files will be +# generated, together with the HTML files, they form an Eclipse help plugin. To +# install this plugin and make it available under the help contents menu in +# Eclipse, the contents of the directory containing the HTML and XML files needs +# to be copied into the plugins directory of eclipse. The name of the directory +# within the plugins directory should be the same as the ECLIPSE_DOC_ID value. +# After copying Eclipse needs to be restarted before the help appears. +# The default value is: NO. +# This tag requires that the tag GENERATE_HTML is set to YES. + +GENERATE_ECLIPSEHELP = NO + +# A unique identifier for the Eclipse help plugin. When installing the plugin +# the directory name containing the HTML and XML files should also have this +# name. Each documentation set should have its own identifier. +# The default value is: org.doxygen.Project. +# This tag requires that the tag GENERATE_ECLIPSEHELP is set to YES. + +ECLIPSE_DOC_ID = org.doxygen.Project + +# If you want full control over the layout of the generated HTML pages it might +# be necessary to disable the index and replace it with your own. The +# DISABLE_INDEX tag can be used to turn on/off the condensed index (tabs) at top +# of each HTML page. A value of NO enables the index and the value YES disables +# it. Since the tabs in the index contain the same information as the navigation +# tree, you can set this option to YES if you also set GENERATE_TREEVIEW to YES. +# The default value is: NO. +# This tag requires that the tag GENERATE_HTML is set to YES. + +DISABLE_INDEX = NO + +# The GENERATE_TREEVIEW tag is used to specify whether a tree-like index +# structure should be generated to display hierarchical information. If the tag +# value is set to YES, a side panel will be generated containing a tree-like +# index structure (just like the one that is generated for HTML Help). For this +# to work a browser that supports JavaScript, DHTML, CSS and frames is required +# (i.e. any modern browser). Windows users are probably better off using the +# HTML help feature. Via custom style sheets (see HTML_EXTRA_STYLESHEET) one can +# further fine-tune the look of the index. As an example, the default style +# sheet generated by doxygen has an example that shows how to put an image at +# the root of the tree instead of the PROJECT_NAME. Since the tree basically has +# the same information as the tab index, you could consider setting +# DISABLE_INDEX to YES when enabling this option. +# The default value is: NO. +# This tag requires that the tag GENERATE_HTML is set to YES. + +GENERATE_TREEVIEW = YES + +# The ENUM_VALUES_PER_LINE tag can be used to set the number of enum values that +# doxygen will group on one line in the generated HTML documentation. +# +# Note that a value of 0 will completely suppress the enum values from appearing +# in the overview section. +# Minimum value: 0, maximum value: 20, default value: 4. +# This tag requires that the tag GENERATE_HTML is set to YES. + +ENUM_VALUES_PER_LINE = 4 + +# If the treeview is enabled (see GENERATE_TREEVIEW) then this tag can be used +# to set the initial width (in pixels) of the frame in which the tree is shown. +# Minimum value: 0, maximum value: 1500, default value: 250. +# This tag requires that the tag GENERATE_HTML is set to YES. + +TREEVIEW_WIDTH = 250 + +# If the EXT_LINKS_IN_WINDOW option is set to YES, doxygen will open links to +# external symbols imported via tag files in a separate window. +# The default value is: NO. +# This tag requires that the tag GENERATE_HTML is set to YES. + +EXT_LINKS_IN_WINDOW = NO + +# If the HTML_FORMULA_FORMAT option is set to svg, doxygen will use the pdf2svg +# tool (see https://github.com/dawbarton/pdf2svg) or inkscape (see +# https://inkscape.org) to generate formulas as SVG images instead of PNGs for +# the HTML output. These images will generally look nicer at scaled resolutions. +# Possible values are: png The default and svg Looks nicer but requires the +# pdf2svg tool. +# The default value is: png. +# This tag requires that the tag GENERATE_HTML is set to YES. + +HTML_FORMULA_FORMAT = png + +# Use this tag to change the font size of LaTeX formulas included as images in +# the HTML documentation. When you change the font size after a successful +# doxygen run you need to manually remove any form_*.png images from the HTML +# output directory to force them to be regenerated. +# Minimum value: 8, maximum value: 50, default value: 10. +# This tag requires that the tag GENERATE_HTML is set to YES. + +FORMULA_FONTSIZE = 10 + +# Use the FORMULA_TRANSPARENT tag to determine whether or not the images +# generated for formulas are transparent PNGs. Transparent PNGs are not +# supported properly for IE 6.0, but are supported on all modern browsers. +# +# Note that when changing this option you need to delete any form_*.png files in +# the HTML output directory before the changes have effect. +# The default value is: YES. +# This tag requires that the tag GENERATE_HTML is set to YES. + +FORMULA_TRANSPARENT = YES + +# The FORMULA_MACROFILE can contain LaTeX \newcommand and \renewcommand commands +# to create new LaTeX commands to be used in formulas as building blocks. See +# the section "Including formulas" for details. + +FORMULA_MACROFILE = + +# Enable the USE_MATHJAX option to render LaTeX formulas using MathJax (see +# https://www.mathjax.org) which uses client side JavaScript for the rendering +# instead of using pre-rendered bitmaps. Use this if you do not have LaTeX +# installed or if you want to formulas look prettier in the HTML output. When +# enabled you may also need to install MathJax separately and configure the path +# to it using the MATHJAX_RELPATH option. +# The default value is: NO. +# This tag requires that the tag GENERATE_HTML is set to YES. + +USE_MATHJAX = NO + +# When MathJax is enabled you can set the default output format to be used for +# the MathJax output. See the MathJax site (see: +# http://docs.mathjax.org/en/latest/output.html) for more details. +# Possible values are: HTML-CSS (which is slower, but has the best +# compatibility), NativeMML (i.e. MathML) and SVG. +# The default value is: HTML-CSS. +# This tag requires that the tag USE_MATHJAX is set to YES. + +MATHJAX_FORMAT = HTML-CSS + +# When MathJax is enabled you need to specify the location relative to the HTML +# output directory using the MATHJAX_RELPATH option. The destination directory +# should contain the MathJax.js script. For instance, if the mathjax directory +# is located at the same level as the HTML output directory, then +# MATHJAX_RELPATH should be ../mathjax. The default value points to the MathJax +# Content Delivery Network so you can quickly see the result without installing +# MathJax. However, it is strongly recommended to install a local copy of +# MathJax from https://www.mathjax.org before deployment. +# The default value is: https://cdn.jsdelivr.net/npm/mathjax@2. +# This tag requires that the tag USE_MATHJAX is set to YES. + +MATHJAX_RELPATH = https://cdn.jsdelivr.net/npm/mathjax@2 + +# The MATHJAX_EXTENSIONS tag can be used to specify one or more MathJax +# extension names that should be enabled during MathJax rendering. For example +# MATHJAX_EXTENSIONS = TeX/AMSmath TeX/AMSsymbols +# This tag requires that the tag USE_MATHJAX is set to YES. + +MATHJAX_EXTENSIONS = + +# The MATHJAX_CODEFILE tag can be used to specify a file with javascript pieces +# of code that will be used on startup of the MathJax code. See the MathJax site +# (see: http://docs.mathjax.org/en/latest/output.html) for more details. For an +# example see the documentation. +# This tag requires that the tag USE_MATHJAX is set to YES. + +MATHJAX_CODEFILE = + +# When the SEARCHENGINE tag is enabled doxygen will generate a search box for +# the HTML output. The underlying search engine uses javascript and DHTML and +# should work on any modern browser. Note that when using HTML help +# (GENERATE_HTMLHELP), Qt help (GENERATE_QHP), or docsets (GENERATE_DOCSET) +# there is already a search function so this one should typically be disabled. +# For large projects the javascript based search engine can be slow, then +# enabling SERVER_BASED_SEARCH may provide a better solution. It is possible to +# search using the keyboard; to jump to the search box use <access key> + S +# (what the <access key> is depends on the OS and browser, but it is typically +# <CTRL>, <ALT>/<option>, or both). Inside the search box use the <cursor down +# key> to jump into the search results window, the results can be navigated +# using the <cursor keys>. Press <Enter> to select an item or <escape> to cancel +# the search. The filter options can be selected when the cursor is inside the +# search box by pressing <Shift>+<cursor down>. Also here use the <cursor keys> +# to select a filter and <Enter> or <escape> to activate or cancel the filter +# option. +# The default value is: YES. +# This tag requires that the tag GENERATE_HTML is set to YES. + +SEARCHENGINE = NO + +# When the SERVER_BASED_SEARCH tag is enabled the search engine will be +# implemented using a web server instead of a web client using JavaScript. There +# are two flavors of web server based searching depending on the EXTERNAL_SEARCH +# setting. When disabled, doxygen will generate a PHP script for searching and +# an index file used by the script. When EXTERNAL_SEARCH is enabled the indexing +# and searching needs to be provided by external tools. See the section +# "External Indexing and Searching" for details. +# The default value is: NO. +# This tag requires that the tag SEARCHENGINE is set to YES. + +SERVER_BASED_SEARCH = YES + +# When EXTERNAL_SEARCH tag is enabled doxygen will no longer generate the PHP +# script for searching. Instead the search results are written to an XML file +# which needs to be processed by an external indexer. Doxygen will invoke an +# external search engine pointed to by the SEARCHENGINE_URL option to obtain the +# search results. +# +# Doxygen ships with an example indexer (doxyindexer) and search engine +# (doxysearch.cgi) which are based on the open source search engine library +# Xapian (see: https://xapian.org/). +# +# See the section "External Indexing and Searching" for details. +# The default value is: NO. +# This tag requires that the tag SEARCHENGINE is set to YES. + +EXTERNAL_SEARCH = NO + +# The SEARCHENGINE_URL should point to a search engine hosted by a web server +# which will return the search results when EXTERNAL_SEARCH is enabled. +# +# Doxygen ships with an example indexer (doxyindexer) and search engine +# (doxysearch.cgi) which are based on the open source search engine library +# Xapian (see: https://xapian.org/). See the section "External Indexing and +# Searching" for details. +# This tag requires that the tag SEARCHENGINE is set to YES. + +SEARCHENGINE_URL = + +# When SERVER_BASED_SEARCH and EXTERNAL_SEARCH are both enabled the unindexed +# search data is written to a file for indexing by an external tool. With the +# SEARCHDATA_FILE tag the name of this file can be specified. +# The default file is: searchdata.xml. +# This tag requires that the tag SEARCHENGINE is set to YES. + +SEARCHDATA_FILE = searchdata.xml + +# When SERVER_BASED_SEARCH and EXTERNAL_SEARCH are both enabled the +# EXTERNAL_SEARCH_ID tag can be used as an identifier for the project. This is +# useful in combination with EXTRA_SEARCH_MAPPINGS to search through multiple +# projects and redirect the results back to the right project. +# This tag requires that the tag SEARCHENGINE is set to YES. + +EXTERNAL_SEARCH_ID = + +# The EXTRA_SEARCH_MAPPINGS tag can be used to enable searching through doxygen +# projects other than the one defined by this configuration file, but that are +# all added to the same external search index. Each project needs to have a +# unique id set via EXTERNAL_SEARCH_ID. The search mapping then maps the id of +# to a relative location where the documentation can be found. The format is: +# EXTRA_SEARCH_MAPPINGS = tagname1=loc1 tagname2=loc2 ... +# This tag requires that the tag SEARCHENGINE is set to YES. + +EXTRA_SEARCH_MAPPINGS = + +#--------------------------------------------------------------------------- +# Configuration options related to the LaTeX output +#--------------------------------------------------------------------------- + +# If the GENERATE_LATEX tag is set to YES, doxygen will generate LaTeX output. +# The default value is: YES. + +GENERATE_LATEX = NO + +# The LATEX_OUTPUT tag is used to specify where the LaTeX docs will be put. If a +# relative path is entered the value of OUTPUT_DIRECTORY will be put in front of +# it. +# The default directory is: latex. +# This tag requires that the tag GENERATE_LATEX is set to YES. + +LATEX_OUTPUT = latex + +# The LATEX_CMD_NAME tag can be used to specify the LaTeX command name to be +# invoked. +# +# Note that when not enabling USE_PDFLATEX the default is latex when enabling +# USE_PDFLATEX the default is pdflatex and when in the later case latex is +# chosen this is overwritten by pdflatex. For specific output languages the +# default can have been set differently, this depends on the implementation of +# the output language. +# This tag requires that the tag GENERATE_LATEX is set to YES. + +LATEX_CMD_NAME = + +# The MAKEINDEX_CMD_NAME tag can be used to specify the command name to generate +# index for LaTeX. +# Note: This tag is used in the Makefile / make.bat. +# See also: LATEX_MAKEINDEX_CMD for the part in the generated output file +# (.tex). +# The default file is: makeindex. +# This tag requires that the tag GENERATE_LATEX is set to YES. + +MAKEINDEX_CMD_NAME = makeindex + +# The LATEX_MAKEINDEX_CMD tag can be used to specify the command name to +# generate index for LaTeX. In case there is no backslash (\) as first character +# it will be automatically added in the LaTeX code. +# Note: This tag is used in the generated output file (.tex). +# See also: MAKEINDEX_CMD_NAME for the part in the Makefile / make.bat. +# The default value is: makeindex. +# This tag requires that the tag GENERATE_LATEX is set to YES. + +LATEX_MAKEINDEX_CMD = makeindex + +# If the COMPACT_LATEX tag is set to YES, doxygen generates more compact LaTeX +# documents. This may be useful for small projects and may help to save some +# trees in general. +# The default value is: NO. +# This tag requires that the tag GENERATE_LATEX is set to YES. + +COMPACT_LATEX = NO + +# The PAPER_TYPE tag can be used to set the paper type that is used by the +# printer. +# Possible values are: a4 (210 x 297 mm), letter (8.5 x 11 inches), legal (8.5 x +# 14 inches) and executive (7.25 x 10.5 inches). +# The default value is: a4. +# This tag requires that the tag GENERATE_LATEX is set to YES. + +PAPER_TYPE = a4 + +# The EXTRA_PACKAGES tag can be used to specify one or more LaTeX package names +# that should be included in the LaTeX output. The package can be specified just +# by its name or with the correct syntax as to be used with the LaTeX +# \usepackage command. To get the times font for instance you can specify : +# EXTRA_PACKAGES=times or EXTRA_PACKAGES={times} +# To use the option intlimits with the amsmath package you can specify: +# EXTRA_PACKAGES=[intlimits]{amsmath} +# If left blank no extra packages will be included. +# This tag requires that the tag GENERATE_LATEX is set to YES. + +EXTRA_PACKAGES = + +# The LATEX_HEADER tag can be used to specify a personal LaTeX header for the +# generated LaTeX document. The header should contain everything until the first +# chapter. If it is left blank doxygen will generate a standard header. See +# section "Doxygen usage" for information on how to let doxygen write the +# default header to a separate file. +# +# Note: Only use a user-defined header if you know what you are doing! The +# following commands have a special meaning inside the header: $title, +# $datetime, $date, $doxygenversion, $projectname, $projectnumber, +# $projectbrief, $projectlogo. Doxygen will replace $title with the empty +# string, for the replacement values of the other commands the user is referred +# to HTML_HEADER. +# This tag requires that the tag GENERATE_LATEX is set to YES. + +LATEX_HEADER = + +# The LATEX_FOOTER tag can be used to specify a personal LaTeX footer for the +# generated LaTeX document. The footer should contain everything after the last +# chapter. If it is left blank doxygen will generate a standard footer. See +# LATEX_HEADER for more information on how to generate a default footer and what +# special commands can be used inside the footer. +# +# Note: Only use a user-defined footer if you know what you are doing! +# This tag requires that the tag GENERATE_LATEX is set to YES. + +LATEX_FOOTER = + +# The LATEX_EXTRA_STYLESHEET tag can be used to specify additional user-defined +# LaTeX style sheets that are included after the standard style sheets created +# by doxygen. Using this option one can overrule certain style aspects. Doxygen +# will copy the style sheet files to the output directory. +# Note: The order of the extra style sheet files is of importance (e.g. the last +# style sheet in the list overrules the setting of the previous ones in the +# list). +# This tag requires that the tag GENERATE_LATEX is set to YES. + +LATEX_EXTRA_STYLESHEET = + +# The LATEX_EXTRA_FILES tag can be used to specify one or more extra images or +# other source files which should be copied to the LATEX_OUTPUT output +# directory. Note that the files will be copied as-is; there are no commands or +# markers available. +# This tag requires that the tag GENERATE_LATEX is set to YES. + +LATEX_EXTRA_FILES = + +# If the PDF_HYPERLINKS tag is set to YES, the LaTeX that is generated is +# prepared for conversion to PDF (using ps2pdf or pdflatex). The PDF file will +# contain links (just like the HTML output) instead of page references. This +# makes the output suitable for online browsing using a PDF viewer. +# The default value is: YES. +# This tag requires that the tag GENERATE_LATEX is set to YES. + +PDF_HYPERLINKS = YES + +# If the USE_PDFLATEX tag is set to YES, doxygen will use pdflatex to generate +# the PDF file directly from the LaTeX files. Set this option to YES, to get a +# higher quality PDF documentation. +# The default value is: YES. +# This tag requires that the tag GENERATE_LATEX is set to YES. + +USE_PDFLATEX = YES + +# If the LATEX_BATCHMODE tag is set to YES, doxygen will add the \batchmode +# command to the generated LaTeX files. This will instruct LaTeX to keep running +# if errors occur, instead of asking the user for help. This option is also used +# when generating formulas in HTML. +# The default value is: NO. +# This tag requires that the tag GENERATE_LATEX is set to YES. + +LATEX_BATCHMODE = NO + +# If the LATEX_HIDE_INDICES tag is set to YES then doxygen will not include the +# index chapters (such as File Index, Compound Index, etc.) in the output. +# The default value is: NO. +# This tag requires that the tag GENERATE_LATEX is set to YES. + +LATEX_HIDE_INDICES = NO + +# If the LATEX_SOURCE_CODE tag is set to YES then doxygen will include source +# code with syntax highlighting in the LaTeX output. +# +# Note that which sources are shown also depends on other settings such as +# SOURCE_BROWSER. +# The default value is: NO. +# This tag requires that the tag GENERATE_LATEX is set to YES. + +LATEX_SOURCE_CODE = NO + +# The LATEX_BIB_STYLE tag can be used to specify the style to use for the +# bibliography, e.g. plainnat, or ieeetr. See +# https://en.wikipedia.org/wiki/BibTeX and \cite for more info. +# The default value is: plain. +# This tag requires that the tag GENERATE_LATEX is set to YES. + +LATEX_BIB_STYLE = plain + +# If the LATEX_TIMESTAMP tag is set to YES then the footer of each generated +# page will contain the date and time when the page was generated. Setting this +# to NO can help when comparing the output of multiple runs. +# The default value is: NO. +# This tag requires that the tag GENERATE_LATEX is set to YES. + +LATEX_TIMESTAMP = NO + +# The LATEX_EMOJI_DIRECTORY tag is used to specify the (relative or absolute) +# path from which the emoji images will be read. If a relative path is entered, +# it will be relative to the LATEX_OUTPUT directory. If left blank the +# LATEX_OUTPUT directory will be used. +# This tag requires that the tag GENERATE_LATEX is set to YES. + +LATEX_EMOJI_DIRECTORY = + +#--------------------------------------------------------------------------- +# Configuration options related to the RTF output +#--------------------------------------------------------------------------- + +# If the GENERATE_RTF tag is set to YES, doxygen will generate RTF output. The +# RTF output is optimized for Word 97 and may not look too pretty with other RTF +# readers/editors. +# The default value is: NO. + +GENERATE_RTF = NO + +# The RTF_OUTPUT tag is used to specify where the RTF docs will be put. If a +# relative path is entered the value of OUTPUT_DIRECTORY will be put in front of +# it. +# The default directory is: rtf. +# This tag requires that the tag GENERATE_RTF is set to YES. + +RTF_OUTPUT = rtf + +# If the COMPACT_RTF tag is set to YES, doxygen generates more compact RTF +# documents. This may be useful for small projects and may help to save some +# trees in general. +# The default value is: NO. +# This tag requires that the tag GENERATE_RTF is set to YES. + +COMPACT_RTF = NO + +# If the RTF_HYPERLINKS tag is set to YES, the RTF that is generated will +# contain hyperlink fields. The RTF file will contain links (just like the HTML +# output) instead of page references. This makes the output suitable for online +# browsing using Word or some other Word compatible readers that support those +# fields. +# +# Note: WordPad (write) and others do not support links. +# The default value is: NO. +# This tag requires that the tag GENERATE_RTF is set to YES. + +RTF_HYPERLINKS = NO + +# Load stylesheet definitions from file. Syntax is similar to doxygen's +# configuration file, i.e. a series of assignments. You only have to provide +# replacements, missing definitions are set to their default value. +# +# See also section "Doxygen usage" for information on how to generate the +# default style sheet that doxygen normally uses. +# This tag requires that the tag GENERATE_RTF is set to YES. + +RTF_STYLESHEET_FILE = + +# Set optional variables used in the generation of an RTF document. Syntax is +# similar to doxygen's configuration file. A template extensions file can be +# generated using doxygen -e rtf extensionFile. +# This tag requires that the tag GENERATE_RTF is set to YES. + +RTF_EXTENSIONS_FILE = + +# If the RTF_SOURCE_CODE tag is set to YES then doxygen will include source code +# with syntax highlighting in the RTF output. +# +# Note that which sources are shown also depends on other settings such as +# SOURCE_BROWSER. +# The default value is: NO. +# This tag requires that the tag GENERATE_RTF is set to YES. + +RTF_SOURCE_CODE = NO + +#--------------------------------------------------------------------------- +# Configuration options related to the man page output +#--------------------------------------------------------------------------- + +# If the GENERATE_MAN tag is set to YES, doxygen will generate man pages for +# classes and files. +# The default value is: NO. + +GENERATE_MAN = NO + +# The MAN_OUTPUT tag is used to specify where the man pages will be put. If a +# relative path is entered the value of OUTPUT_DIRECTORY will be put in front of +# it. A directory man3 will be created inside the directory specified by +# MAN_OUTPUT. +# The default directory is: man. +# This tag requires that the tag GENERATE_MAN is set to YES. + +MAN_OUTPUT = man + +# The MAN_EXTENSION tag determines the extension that is added to the generated +# man pages. In case the manual section does not start with a number, the number +# 3 is prepended. The dot (.) at the beginning of the MAN_EXTENSION tag is +# optional. +# The default value is: .3. +# This tag requires that the tag GENERATE_MAN is set to YES. + +MAN_EXTENSION = .3 + +# The MAN_SUBDIR tag determines the name of the directory created within +# MAN_OUTPUT in which the man pages are placed. If defaults to man followed by +# MAN_EXTENSION with the initial . removed. +# This tag requires that the tag GENERATE_MAN is set to YES. + +MAN_SUBDIR = + +# If the MAN_LINKS tag is set to YES and doxygen generates man output, then it +# will generate one additional man file for each entity documented in the real +# man page(s). These additional files only source the real man page, but without +# them the man command would be unable to find the correct page. +# The default value is: NO. +# This tag requires that the tag GENERATE_MAN is set to YES. + +MAN_LINKS = NO + +#--------------------------------------------------------------------------- +# Configuration options related to the XML output +#--------------------------------------------------------------------------- + +# If the GENERATE_XML tag is set to YES, doxygen will generate an XML file that +# captures the structure of the code including all documentation. +# The default value is: NO. + +GENERATE_XML = NO + +# The XML_OUTPUT tag is used to specify where the XML pages will be put. If a +# relative path is entered the value of OUTPUT_DIRECTORY will be put in front of +# it. +# The default directory is: xml. +# This tag requires that the tag GENERATE_XML is set to YES. + +XML_OUTPUT = xml + +# If the XML_PROGRAMLISTING tag is set to YES, doxygen will dump the program +# listings (including syntax highlighting and cross-referencing information) to +# the XML output. Note that enabling this will significantly increase the size +# of the XML output. +# The default value is: YES. +# This tag requires that the tag GENERATE_XML is set to YES. + +XML_PROGRAMLISTING = YES + +# If the XML_NS_MEMB_FILE_SCOPE tag is set to YES, doxygen will include +# namespace members in file scope as well, matching the HTML output. +# The default value is: NO. +# This tag requires that the tag GENERATE_XML is set to YES. + +XML_NS_MEMB_FILE_SCOPE = NO + +#--------------------------------------------------------------------------- +# Configuration options related to the DOCBOOK output +#--------------------------------------------------------------------------- + +# If the GENERATE_DOCBOOK tag is set to YES, doxygen will generate Docbook files +# that can be used to generate PDF. +# The default value is: NO. + +GENERATE_DOCBOOK = NO + +# The DOCBOOK_OUTPUT tag is used to specify where the Docbook pages will be put. +# If a relative path is entered the value of OUTPUT_DIRECTORY will be put in +# front of it. +# The default directory is: docbook. +# This tag requires that the tag GENERATE_DOCBOOK is set to YES. + +DOCBOOK_OUTPUT = docbook + +# If the DOCBOOK_PROGRAMLISTING tag is set to YES, doxygen will include the +# program listings (including syntax highlighting and cross-referencing +# information) to the DOCBOOK output. Note that enabling this will significantly +# increase the size of the DOCBOOK output. +# The default value is: NO. +# This tag requires that the tag GENERATE_DOCBOOK is set to YES. + +DOCBOOK_PROGRAMLISTING = NO + +#--------------------------------------------------------------------------- +# Configuration options for the AutoGen Definitions output +#--------------------------------------------------------------------------- + +# If the GENERATE_AUTOGEN_DEF tag is set to YES, doxygen will generate an +# AutoGen Definitions (see http://autogen.sourceforge.net/) file that captures +# the structure of the code including all documentation. Note that this feature +# is still experimental and incomplete at the moment. +# The default value is: NO. + +GENERATE_AUTOGEN_DEF = NO + +#--------------------------------------------------------------------------- +# Configuration options related to the Perl module output +#--------------------------------------------------------------------------- + +# If the GENERATE_PERLMOD tag is set to YES, doxygen will generate a Perl module +# file that captures the structure of the code including all documentation. +# +# Note that this feature is still experimental and incomplete at the moment. +# The default value is: NO. + +GENERATE_PERLMOD = NO + +# If the PERLMOD_LATEX tag is set to YES, doxygen will generate the necessary +# Makefile rules, Perl scripts and LaTeX code to be able to generate PDF and DVI +# output from the Perl module output. +# The default value is: NO. +# This tag requires that the tag GENERATE_PERLMOD is set to YES. + +PERLMOD_LATEX = NO + +# If the PERLMOD_PRETTY tag is set to YES, the Perl module output will be nicely +# formatted so it can be parsed by a human reader. This is useful if you want to +# understand what is going on. On the other hand, if this tag is set to NO, the +# size of the Perl module output will be much smaller and Perl will parse it +# just the same. +# The default value is: YES. +# This tag requires that the tag GENERATE_PERLMOD is set to YES. + +PERLMOD_PRETTY = YES + +# The names of the make variables in the generated doxyrules.make file are +# prefixed with the string contained in PERLMOD_MAKEVAR_PREFIX. This is useful +# so different doxyrules.make files included by the same Makefile don't +# overwrite each other's variables. +# This tag requires that the tag GENERATE_PERLMOD is set to YES. + +PERLMOD_MAKEVAR_PREFIX = + +#--------------------------------------------------------------------------- +# Configuration options related to the preprocessor +#--------------------------------------------------------------------------- + +# If the ENABLE_PREPROCESSING tag is set to YES, doxygen will evaluate all +# C-preprocessor directives found in the sources and include files. +# The default value is: YES. + +ENABLE_PREPROCESSING = YES + +# If the MACRO_EXPANSION tag is set to YES, doxygen will expand all macro names +# in the source code. If set to NO, only conditional compilation will be +# performed. Macro expansion can be done in a controlled way by setting +# EXPAND_ONLY_PREDEF to YES. +# The default value is: NO. +# This tag requires that the tag ENABLE_PREPROCESSING is set to YES. + +MACRO_EXPANSION = YES + +# If the EXPAND_ONLY_PREDEF and MACRO_EXPANSION tags are both set to YES then +# the macro expansion is limited to the macros specified with the PREDEFINED and +# EXPAND_AS_DEFINED tags. +# The default value is: NO. +# This tag requires that the tag ENABLE_PREPROCESSING is set to YES. + +EXPAND_ONLY_PREDEF = NO + +# If the SEARCH_INCLUDES tag is set to YES, the include files in the +# INCLUDE_PATH will be searched if a #include is found. +# The default value is: YES. +# This tag requires that the tag ENABLE_PREPROCESSING is set to YES. + +SEARCH_INCLUDES = YES + +# The INCLUDE_PATH tag can be used to specify one or more directories that +# contain include files that are not input files but should be processed by the +# preprocessor. +# This tag requires that the tag SEARCH_INCLUDES is set to YES. + +INCLUDE_PATH = @DOXYGEN_INCLUDE_ALIASES@ + +# You can use the INCLUDE_FILE_PATTERNS tag to specify one or more wildcard +# patterns (like *.h and *.hpp) to filter out the header-files in the +# directories. If left blank, the patterns specified with FILE_PATTERNS will be +# used. +# This tag requires that the tag ENABLE_PREPROCESSING is set to YES. + +INCLUDE_FILE_PATTERNS = + +# The PREDEFINED tag can be used to specify one or more macro names that are +# defined before the preprocessor is started (similar to the -D option of e.g. +# gcc). The argument of the tag is a list of macros of the form: name or +# name=definition (no spaces). If the definition and the "=" are omitted, "=1" +# is assumed. To prevent a macro definition from being undefined via #undef or +# recursively expanded use the := operator instead of the = operator. +# This tag requires that the tag ENABLE_PREPROCESSING is set to YES. + +PREDEFINED = + +# If the MACRO_EXPANSION and EXPAND_ONLY_PREDEF tags are set to YES then this +# tag can be used to specify a list of macro names that should be expanded. The +# macro definition that is found in the sources will be used. Use the PREDEFINED +# tag if you want to use a different macro definition that overrules the +# definition found in the source code. +# This tag requires that the tag ENABLE_PREPROCESSING is set to YES. + +EXPAND_AS_DEFINED = + +# If the SKIP_FUNCTION_MACROS tag is set to YES then doxygen's preprocessor will +# remove all references to function-like macros that are alone on a line, have +# an all uppercase name, and do not end with a semicolon. Such function macros +# are typically used for boiler-plate code, and will confuse the parser if not +# removed. +# The default value is: YES. +# This tag requires that the tag ENABLE_PREPROCESSING is set to YES. + +SKIP_FUNCTION_MACROS = YES + +#--------------------------------------------------------------------------- +# Configuration options related to external references +#--------------------------------------------------------------------------- + +# The TAGFILES tag can be used to specify one or more tag files. For each tag +# file the location of the external documentation should be added. The format of +# a tag file without this location is as follows: +# TAGFILES = file1 file2 ... +# Adding location for the tag files is done as follows: +# TAGFILES = file1=loc1 "file2 = loc2" ... +# where loc1 and loc2 can be relative or absolute paths or URLs. See the +# section "Linking to external documentation" for more information about the use +# of tag files. +# Note: Each tag file must have a unique name (where the name does NOT include +# the path). If a tag file is not located in the directory in which doxygen is +# run, you must also specify the path to the tagfile here. + +TAGFILES = + +# When a file name is specified after GENERATE_TAGFILE, doxygen will create a +# tag file that is based on the input files it reads. See section "Linking to +# external documentation" for more information about the usage of tag files. + +GENERATE_TAGFILE = + +# If the ALLEXTERNALS tag is set to YES, all external class will be listed in +# the class index. If set to NO, only the inherited external classes will be +# listed. +# The default value is: NO. + +ALLEXTERNALS = NO + +# If the EXTERNAL_GROUPS tag is set to YES, all external groups will be listed +# in the modules index. If set to NO, only the current project's groups will be +# listed. +# The default value is: YES. + +EXTERNAL_GROUPS = YES + +# If the EXTERNAL_PAGES tag is set to YES, all external pages will be listed in +# the related pages index. If set to NO, only the current project's pages will +# be listed. +# The default value is: YES. + +EXTERNAL_PAGES = YES + +#--------------------------------------------------------------------------- +# Configuration options related to the dot tool +#--------------------------------------------------------------------------- + +# If the CLASS_DIAGRAMS tag is set to YES, doxygen will generate a class diagram +# (in HTML and LaTeX) for classes with base or super classes. Setting the tag to +# NO turns the diagrams off. Note that this option also works with HAVE_DOT +# disabled, but it is recommended to install and use dot, since it yields more +# powerful graphs. +# The default value is: YES. + +CLASS_DIAGRAMS = YES + +# You can include diagrams made with dia in doxygen documentation. Doxygen will +# then run dia to produce the diagram and insert it in the documentation. The +# DIA_PATH tag allows you to specify the directory where the dia binary resides. +# If left empty dia is assumed to be found in the default search path. + +DIA_PATH = + +# If set to YES the inheritance and collaboration graphs will hide inheritance +# and usage relations if the target is undocumented or is not a class. +# The default value is: YES. + +HIDE_UNDOC_RELATIONS = YES + +# If you set the HAVE_DOT tag to YES then doxygen will assume the dot tool is +# available from the path. This tool is part of Graphviz (see: +# http://www.graphviz.org/), a graph visualization toolkit from AT&T and Lucent +# Bell Labs. The other options in this section have no effect if this option is +# set to NO +# The default value is: NO. + +HAVE_DOT = NO + +# The DOT_NUM_THREADS specifies the number of dot invocations doxygen is allowed +# to run in parallel. When set to 0 doxygen will base this on the number of +# processors available in the system. You can set it explicitly to a value +# larger than 0 to get control over the balance between CPU load and processing +# speed. +# Minimum value: 0, maximum value: 32, default value: 0. +# This tag requires that the tag HAVE_DOT is set to YES. + +DOT_NUM_THREADS = 0 + +# When you want a differently looking font in the dot files that doxygen +# generates you can specify the font name using DOT_FONTNAME. You need to make +# sure dot is able to find the font, which can be done by putting it in a +# standard location or by setting the DOTFONTPATH environment variable or by +# setting DOT_FONTPATH to the directory containing the font. +# The default value is: Helvetica. +# This tag requires that the tag HAVE_DOT is set to YES. + +DOT_FONTNAME = Helvetica + +# The DOT_FONTSIZE tag can be used to set the size (in points) of the font of +# dot graphs. +# Minimum value: 4, maximum value: 24, default value: 10. +# This tag requires that the tag HAVE_DOT is set to YES. + +DOT_FONTSIZE = 10 + +# By default doxygen will tell dot to use the default font as specified with +# DOT_FONTNAME. If you specify a different font using DOT_FONTNAME you can set +# the path where dot can find it using this tag. +# This tag requires that the tag HAVE_DOT is set to YES. + +DOT_FONTPATH = + +# If the CLASS_GRAPH tag is set to YES then doxygen will generate a graph for +# each documented class showing the direct and indirect inheritance relations. +# Setting this tag to YES will force the CLASS_DIAGRAMS tag to NO. +# The default value is: YES. +# This tag requires that the tag HAVE_DOT is set to YES. + +CLASS_GRAPH = YES + +# If the COLLABORATION_GRAPH tag is set to YES then doxygen will generate a +# graph for each documented class showing the direct and indirect implementation +# dependencies (inheritance, containment, and class references variables) of the +# class with other documented classes. +# The default value is: YES. +# This tag requires that the tag HAVE_DOT is set to YES. + +COLLABORATION_GRAPH = YES + +# If the GROUP_GRAPHS tag is set to YES then doxygen will generate a graph for +# groups, showing the direct groups dependencies. +# The default value is: YES. +# This tag requires that the tag HAVE_DOT is set to YES. + +GROUP_GRAPHS = YES + +# If the UML_LOOK tag is set to YES, doxygen will generate inheritance and +# collaboration diagrams in a style similar to the OMG's Unified Modeling +# Language. +# The default value is: NO. +# This tag requires that the tag HAVE_DOT is set to YES. + +UML_LOOK = NO + +# If the UML_LOOK tag is enabled, the fields and methods are shown inside the +# class node. If there are many fields or methods and many nodes the graph may +# become too big to be useful. The UML_LIMIT_NUM_FIELDS threshold limits the +# number of items for each type to make the size more manageable. Set this to 0 +# for no limit. Note that the threshold may be exceeded by 50% before the limit +# is enforced. So when you set the threshold to 10, up to 15 fields may appear, +# but if the number exceeds 15, the total amount of fields shown is limited to +# 10. +# Minimum value: 0, maximum value: 100, default value: 10. +# This tag requires that the tag HAVE_DOT is set to YES. + +UML_LIMIT_NUM_FIELDS = 10 + +# If the TEMPLATE_RELATIONS tag is set to YES then the inheritance and +# collaboration graphs will show the relations between templates and their +# instances. +# The default value is: NO. +# This tag requires that the tag HAVE_DOT is set to YES. + +TEMPLATE_RELATIONS = NO + +# If the INCLUDE_GRAPH, ENABLE_PREPROCESSING and SEARCH_INCLUDES tags are set to +# YES then doxygen will generate a graph for each documented file showing the +# direct and indirect include dependencies of the file with other documented +# files. +# The default value is: YES. +# This tag requires that the tag HAVE_DOT is set to YES. + +INCLUDE_GRAPH = YES + +# If the INCLUDED_BY_GRAPH, ENABLE_PREPROCESSING and SEARCH_INCLUDES tags are +# set to YES then doxygen will generate a graph for each documented file showing +# the direct and indirect include dependencies of the file with other documented +# files. +# The default value is: YES. +# This tag requires that the tag HAVE_DOT is set to YES. + +INCLUDED_BY_GRAPH = YES + +# If the CALL_GRAPH tag is set to YES then doxygen will generate a call +# dependency graph for every global function or class method. +# +# Note that enabling this option will significantly increase the time of a run. +# So in most cases it will be better to enable call graphs for selected +# functions only using the \callgraph command. Disabling a call graph can be +# accomplished by means of the command \hidecallgraph. +# The default value is: NO. +# This tag requires that the tag HAVE_DOT is set to YES. + +CALL_GRAPH = NO + +# If the CALLER_GRAPH tag is set to YES then doxygen will generate a caller +# dependency graph for every global function or class method. +# +# Note that enabling this option will significantly increase the time of a run. +# So in most cases it will be better to enable caller graphs for selected +# functions only using the \callergraph command. Disabling a caller graph can be +# accomplished by means of the command \hidecallergraph. +# The default value is: NO. +# This tag requires that the tag HAVE_DOT is set to YES. + +CALLER_GRAPH = NO + +# If the GRAPHICAL_HIERARCHY tag is set to YES then doxygen will graphical +# hierarchy of all classes instead of a textual one. +# The default value is: YES. +# This tag requires that the tag HAVE_DOT is set to YES. + +GRAPHICAL_HIERARCHY = YES + +# If the DIRECTORY_GRAPH tag is set to YES then doxygen will show the +# dependencies a directory has on other directories in a graphical way. The +# dependency relations are determined by the #include relations between the +# files in the directories. +# The default value is: YES. +# This tag requires that the tag HAVE_DOT is set to YES. + +DIRECTORY_GRAPH = YES + +# The DOT_IMAGE_FORMAT tag can be used to set the image format of the images +# generated by dot. For an explanation of the image formats see the section +# output formats in the documentation of the dot tool (Graphviz (see: +# http://www.graphviz.org/)). +# Note: If you choose svg you need to set HTML_FILE_EXTENSION to xhtml in order +# to make the SVG files visible in IE 9+ (other browsers do not have this +# requirement). +# Possible values are: png, jpg, gif, svg, png:gd, png:gd:gd, png:cairo, +# png:cairo:gd, png:cairo:cairo, png:cairo:gdiplus, png:gdiplus and +# png:gdiplus:gdiplus. +# The default value is: png. +# This tag requires that the tag HAVE_DOT is set to YES. + +DOT_IMAGE_FORMAT = png + +# If DOT_IMAGE_FORMAT is set to svg, then this option can be set to YES to +# enable generation of interactive SVG images that allow zooming and panning. +# +# Note that this requires a modern browser other than Internet Explorer. Tested +# and working are Firefox, Chrome, Safari, and Opera. +# Note: For IE 9+ you need to set HTML_FILE_EXTENSION to xhtml in order to make +# the SVG files visible. Older versions of IE do not have SVG support. +# The default value is: NO. +# This tag requires that the tag HAVE_DOT is set to YES. + +INTERACTIVE_SVG = NO + +# The DOT_PATH tag can be used to specify the path where the dot tool can be +# found. If left blank, it is assumed the dot tool can be found in the path. +# This tag requires that the tag HAVE_DOT is set to YES. + +DOT_PATH = + +# The DOTFILE_DIRS tag can be used to specify one or more directories that +# contain dot files that are included in the documentation (see the \dotfile +# command). +# This tag requires that the tag HAVE_DOT is set to YES. + +DOTFILE_DIRS = + +# The MSCFILE_DIRS tag can be used to specify one or more directories that +# contain msc files that are included in the documentation (see the \mscfile +# command). + +MSCFILE_DIRS = + +# The DIAFILE_DIRS tag can be used to specify one or more directories that +# contain dia files that are included in the documentation (see the \diafile +# command). + +DIAFILE_DIRS = + +# When using plantuml, the PLANTUML_JAR_PATH tag should be used to specify the +# path where java can find the plantuml.jar file. If left blank, it is assumed +# PlantUML is not used or called during a preprocessing step. Doxygen will +# generate a warning when it encounters a \startuml command in this case and +# will not generate output for the diagram. + +PLANTUML_JAR_PATH = + +# When using plantuml, the PLANTUML_CFG_FILE tag can be used to specify a +# configuration file for plantuml. + +PLANTUML_CFG_FILE = + +# When using plantuml, the specified paths are searched for files specified by +# the !include statement in a plantuml block. + +PLANTUML_INCLUDE_PATH = + +# The DOT_GRAPH_MAX_NODES tag can be used to set the maximum number of nodes +# that will be shown in the graph. If the number of nodes in a graph becomes +# larger than this value, doxygen will truncate the graph, which is visualized +# by representing a node as a red box. Note that doxygen if the number of direct +# children of the root node in a graph is already larger than +# DOT_GRAPH_MAX_NODES then the graph will not be shown at all. Also note that +# the size of a graph can be further restricted by MAX_DOT_GRAPH_DEPTH. +# Minimum value: 0, maximum value: 10000, default value: 50. +# This tag requires that the tag HAVE_DOT is set to YES. + +DOT_GRAPH_MAX_NODES = 50 + +# The MAX_DOT_GRAPH_DEPTH tag can be used to set the maximum depth of the graphs +# generated by dot. A depth value of 3 means that only nodes reachable from the +# root by following a path via at most 3 edges will be shown. Nodes that lay +# further from the root node will be omitted. Note that setting this option to 1 +# or 2 may greatly reduce the computation time needed for large code bases. Also +# note that the size of a graph can be further restricted by +# DOT_GRAPH_MAX_NODES. Using a depth of 0 means no depth restriction. +# Minimum value: 0, maximum value: 1000, default value: 0. +# This tag requires that the tag HAVE_DOT is set to YES. + +MAX_DOT_GRAPH_DEPTH = 0 + +# Set the DOT_TRANSPARENT tag to YES to generate images with a transparent +# background. This is disabled by default, because dot on Windows does not seem +# to support this out of the box. +# +# Warning: Depending on the platform used, enabling this option may lead to +# badly anti-aliased labels on the edges of a graph (i.e. they become hard to +# read). +# The default value is: NO. +# This tag requires that the tag HAVE_DOT is set to YES. + +DOT_TRANSPARENT = NO + +# Set the DOT_MULTI_TARGETS tag to YES to allow dot to generate multiple output +# files in one run (i.e. multiple -o and -T options on the command line). This +# makes dot run faster, but since only newer versions of dot (>1.8.10) support +# this, this feature is disabled by default. +# The default value is: NO. +# This tag requires that the tag HAVE_DOT is set to YES. + +DOT_MULTI_TARGETS = NO + +# If the GENERATE_LEGEND tag is set to YES doxygen will generate a legend page +# explaining the meaning of the various boxes and arrows in the dot generated +# graphs. +# The default value is: YES. +# This tag requires that the tag HAVE_DOT is set to YES. + +GENERATE_LEGEND = YES + +# If the DOT_CLEANUP tag is set to YES, doxygen will remove the intermediate dot +# files that are used to generate the various graphs. +# The default value is: YES. +# This tag requires that the tag HAVE_DOT is set to YES. + +DOT_CLEANUP = YES diff --git a/doxygen/Makefile b/doxygen/Makefile new file mode 100644 index 0000000..13e1d96 --- /dev/null +++ b/doxygen/Makefile @@ -0,0 +1,20 @@ +SHELL := bash +.ONESHELL: +.SHELLFLAGS := -eu -o pipefail -c +.DELETE_ON_ERROR: +MAKEFLAGS += --warn-undefined-variables +MAKEFLAGS += --no-builtin-rules + +ifeq ($(origin .RECIPEPREFIX), undefined) + $(error This Make does not support .RECIPEPREFIX. Please use GNU Make 4.0 or later) +endif +.RECIPEPREFIX = > + +ifdef PROGRAMFILES +DOXYGEN=C:/Program\ Files/doxygen/bin/doxygen.exe +else +DOXYGEN=doxygen +endif + +build: +> $(DOXYGEN) Doxyfile diff --git a/doxygen/aliases b/doxygen/aliases new file mode 100644 index 0000000..aa22bd4 --- /dev/null +++ b/doxygen/aliases @@ -0,0 +1,184 @@ +################################################################################ +# Styling +################################################################################ + +ALIASES += Bold{1}="<b>\1</b>" +ALIASES += Emph{1}="<em>\1</em>" +ALIASES += Code{1}="<tt>\1</tt>" + +################################################################################ +# Return values +################################################################################ + +ALIASES += success{1}="\Bold{Success:} \1" +ALIASES += failure{1}="\Bold{Failure:} \1" + +ALIASES += herr_t="Returns a non-negative value if successful; otherwise returns a negative value." +ALIASES += hid_t{1}="Returns a \1 identifier if successful; otherwise returns #H5I_INVALID_HID. " +ALIASES += hid_ti{1}="Returns an \1 identifier if successful; otherwise returns #H5I_INVALID_HID. " +ALIASES += hid_tv{1}="Returns an \1 identifier if successful; otherwise returns a negative value. " +ALIASES += htri_t="Returns zero (false), a positive (true) or a negative (failure) value." + +################################################################################ +# General +################################################################################ + +ALIASES += idx_type="\param[in] idx_type Index type" +ALIASES += idx_type{1}="\param[in] \1 Index type" + +ALIASES += order="\param[in] order Iteration order" +ALIASES += order{1}="\param[in] \1 Iteration order" + +ALIASES += op="\param[in] op Callback function" +ALIASES += op{1}="\param[in] \1 Callback function" + +ALIASES += op_data="\param[in,out] op_data User-defined callback function context" +ALIASES += op_data{1}="\param[in,out] \1 User-defined callback function context" + +################################################################################ +# Attributes +################################################################################ + +ALIASES += attr_id="\param[in] attr_id Attribute identifier" +ALIASES += attr_id{1}="\param[in] \1 Attribute identifier" + +################################################################################ +# Dataset +################################################################################ + +ALIASES += dset_id="\param[in] dset_id Dataset identifier" +ALIASES += dset_id{1}="\param[in] \1 Dataset identifier" + +################################################################################ +# Dataspaces +################################################################################ + +ALIASES += space_id="\param[in] space_id Dataspace identifier" +ALIASES += space_id{1}="\param[in] \1 Dataspace identifier" + +################################################################################ +# Dataypes +################################################################################ + +ALIASES += dtype_id="\param[in] dtype_id Datatype identifier" +ALIASES += dtype_id{1}="\param[in] \1 Datatype identifier" + +ALIASES += file_type_id{1}="\param[in] \1 Datatype (in-file) identifier" +ALIASES += mem_type_id{1}="\param[in] \1 Datatype (in-memory) identifier" + +################################################################################ +# Files +################################################################################ + +ALIASES += file_id="\param[in] file_id File identifier" +ALIASES += file_id{1}="\param[in] \1 File identifier" + +ALIASES += fapl_id="\param[in] fapl_id File access property list identifier" +ALIASES += fapl_id{1}="\param[in] \1 File access property list identifier" + +ALIASES += fcpl_id="\param[in] fcpl_id File creation property list identifier" +ALIASES += fcpl_id{1}="\param[in] \1 File creation property list identifier" + +################################################################################ +# Groups +################################################################################ + +ALIASES += group_id="\param[in] group_id Group identifier" +ALIASES += group_id{1}="\param[in] \1 Group identifier" + +################################################################################ +# Locations +################################################################################ + +ALIASES += loc_id="\param[in] loc_id Location identifier" +ALIASES += loc_id{1}="\param[in] \1 Location identifier" + +ALIASES += fgdt_loc_id="\loc_id. The identifier may be that of a file, group, dataset, or named datatype." +ALIASES += fgdt_loc_id{1}="\loc_id{\1}. The identifier may be that of a file, group, dataset, or named datatype." + +ALIASES += fgdta_loc_id="\loc_id. The identifier may be that of a file, group, dataset, named datatype, or attribute." +ALIASES += fgdta_loc_id{1}="\loc_id{\1}. The identifier may be that of a file, group, dataset, named datatype, or attribute." + +ALIASES += fg_loc_id="\loc_id. The identifier may be that of a file or group." +ALIASES += fg_loc_id{1}="\loc_id{\1}. The identifier may be that of a file or group." + +################################################################################ +# Property lists +################################################################################ + +ALIASES += aapl_id="\param[in] aapl_id Attribute access property list identifier" +ALIASES += aapl_id{1}="\param[in] \1 Attribute access property list identifier" + +ALIASES += acpl_id="\param[in] acpl_id Attribute creation property list identifier" +ALIASES += acpl_id{1}="\param[in] \1 Attribute creation property list identifier" + +ALIASES += dapl_id="\param[in] dapl_id Dataset access property list identifier" +ALIASES += dapl_id{1}="\param[in] \1 Dataset access property list identifier" + +ALIASES += dcpl_id="\param[in] dcpl_id Dataset creation property list identifier" +ALIASES += dcpl_id{1}="\param[in] \1 Dataset creation property list identifier" + +ALIASES += dxpl_id="\param[in] dxpl_id Dataset transfer property list identifier" +ALIASES += dxpl_id{1}="\param[in] \1 Dataset transfer property list identifier" + +ALIASES += gapl_id="\param[in] gapl_id Group access property list identifier" +ALIASES += gapl_id{1}="\param[in] \1 Group access property list identifier" + +ALIASES += gcpl_id="\param[in] gcpl_id Group creation property list identifier" +ALIASES += gcpl_id{1}="\param[in] \1 Group creation property list identifier" + +ALIASES += lapl_id="\param[in] lapl_id Link access property list identifier" +ALIASES += lapl_id{1}="\param[in] \1 Link access property list identifier" + +ALIASES += lcpl_id="\param[in] lcpl_id Link creation property list identifier" +ALIASES += lcpl_id{1}="\param[in] \1 Link creation property list identifier" + +ALIASES += vipl_id="\param[in] vipl_id VOL initialization property list identifier" +ALIASES += vipl_id{1}="\param[in] \1 vipl_id VOL initialization property list identifier" + +ALIASES += plist_id="\param[in] plist_id Property list identifier" +ALIASES += plist_id{1}="\param[in] \1 Property list identifier" + +ALIASES += plistcls_id="\param[in] plistcls_id Property list class identifier" +ALIASES += plistcls_id{1}="\param[in] \1 Property list class identifier" + +################################################################################ +# Objects +################################################################################ + +ALIASES += obj_id="\param[in] obj_id Object identifier" +ALIASES += obj_id{1}="\param[in] \1 Object identifier" +ALIASES += loc_obj_id{1}="\param[in] \1 Location identifier of object" + +ALIASES += fgdta_obj_id="\obj_id. The identifier may be that of a file, group, dataset, named datatype, or attribute." +ALIASES += fgdta_obj_id{1}="\obj_id{\1}. The identifier may be that of a file, group, dataset, named datatype, or attribute." +ALIASES += fgdta_loc_obj_id{1}="\loc_obj_id{\1}. The identifier may be that of a file, group, dataset, named datatype, or attribute." + +################################################################################ +# Others +################################################################################ + +ALIASES += estack_id="\param[in] estack_id Error stack identifier" +ALIASES += estack_id{1}="\param[in] \1 Error stack identifier" + +################################################################################ +# The Usual Suspects +################################################################################ + +ALIASES += csets="<table><tr><td>#H5T_CSET_ASCII</td><td>US ASCII</td></tr><tr><td>#H5T_CSET_UTF8</td><td>UTF-8 Unicode encoding</td></tr></table>" +ALIASES += datatype_class=" \li #H5T_INTEGER \li #H5T_FLOAT \li #H5T_STRING \li #H5T_BITFIELD \li #H5T_OPAQUE \li #H5T_COMPOUND \li #H5T_REFERENCE \li #H5T_ENUM \li #H5T_VLEN \li #H5T_ARRAY" +ALIASES += file_access="<table><tr><td>#H5F_ACC_RDWR</td><td>File was opened with read/write access.</td></tr><tr><td>#H5F_ACC_RDONLY</td><td>File was opened with read-only access.</td></tr><tr><td>#H5F_ACC_SWMR_WRITE</td><td>File was opened with read/write access for a single-writer/multiple-reader (SWMR) scenario. Note that the writer process must also open the file with the #H5F_ACC_RDWR flag.</td></tr><tr><td>#H5F_ACC_SWMR_READ</td><td>File was opened with read-only access for a single-writer/multiple-reader (SWMR) scenario. Note that the reader process must also open the file with the #H5F_ACC_RDONLY flag.</td></tr></table>" +ALIASES += id_types="<table><tr><td>#H5I_FILE</td><td>File</td></tr><tr><td>#H5I_GROUP</td><td>Group</td></tr><tr><td>#H5I_DATATYPE</td><td>Datatype</td></tr><tr><td>#H5I_DATASPACE</td><td>Dataspace</td></tr><tr><td>#H5I_DATASET</td><td>Dataset</td></tr><tr><td>#H5I_ATTR</td><td>Attribute</td></tr></table>" +ALIASES += indexes="<table><tr><td>#H5_INDEX_NAME</td><td>Lexicographic order on name</td></tr><tr><td>#H5_INDEX_CRT_ORDER</td><td>Index on creation order</td></tr></table>" +ALIASES += link_types="<table><tr><td>#H5L_TYPE_HARD</td><td>Hard link</td></tr><tr><td>#H5L_TYPE_SOFT</td><td>Soft link</td></tr><tr><td>#H5L_TYPE_EXTERNAL</td><td>External link</td></tr><tr><td>#H5L_TYPE_ERROR</td><td>Error</td></tr></table>" +ALIASES += mem_types="<table><tr><td>#H5FD_MEM_DEFAULT</td><td>The default file memory allocation type</td></tr><tr><td>#H5FD_MEM_SUPER</td><td>File memory allocated for Superblock</td></tr><tr><td>#H5FD_MEM_BTREE</td><td>File memory allocated for B-tree</td></tr><tr><td>#H5FD_MEM_DRAW</td><td>File memory allocated for raw data</td></tr><tr><td>#H5FD_MEM_GHEAP</td><td>File memory allocated for Global Heap</td></tr><tr><td>#H5FD_MEM_LHEAP</td><td>File memory allocated for Local Heap</td></tr><tr><td>#H5FD_MEM_OHDR</td><td>File memory allocated for Object Header</td></tr></table>" +ALIASES += norm_type="<table><tr><td>#H5T_NORM_IMPLIED</td><td>0</td><td>MSB of mantissa is not stored, always 1</td></tr><tr><td>#H5T_NORM_MSBSET</td><td>1</td><td>MSB of mantissa is always 1</td></tr><tr><td>#H5T_NORM_NONE</td><td>2</td><td>Mantissa is not normalized</td></tr></table>" +ALIASES += obj_types="<table><tr><td>#H5F_OBJ_FILE</td><td>Files only</td></tr><tr><td>#H5F_OBJ_DATASET</td><td>Datasets only</td></tr><tr><td>#H5F_OBJ_GROUP</td><td>Groups only</td></tr><tr><td>#H5F_OBJ_DATATYPE</td><td>Named datatypes only</td></tr><tr><td>#H5F_OBJ_ATTR</td><td>Attributes only</td></tr><tr><td>#H5F_OBJ_ALL</td><td>All of the above</td></tr></tr><tr><td>#H5F_OBJ_LOCAL</td><td>Restrict search to objects opened through current file identifier.</td></tr></table> \attention #H5F_OBJ_LOCAL does not stand alone; it is effective only when used in combination with one or more of the preceding types. For example, #H5F_OBJ_DATASET | #H5F_OBJ_GROUP | #H5F_OBJ_LOCAL would count all datasets and groups opened through the current file identifier." +ALIASES += orders="<table><tr><td>#H5_ITER_INC</td><td>Increasing order</td></tr><tr><td>#H5_ITER_DEC</td><td>Decreasing order</td></tr><tr><td>#H5_ITER_NATIVE</td><td>Fastest available order</td></tr></table>" +ALIASES += padding_type="<table><tr><td>#H5T_PAD_ZERO</td><td>0</td><td>Set background to zeros</td></tr><tr><td>#H5T_PAD_ONE</td><td>1</td><td>Set background to ones</td></tr><tr><td>#H5T_PAD_BACKGROUND</td><td>2</td><td>Leave background alone</td></tr></table>" +ALIASES += scopes="<table><tr><td>#H5F_SCOPE_GLOBAL</td><td>Flushes the entire virtual file</td></tr><tr><td>#H5F_SCOPE_LOCAL</td><td>Flushes only the specified file</td></tr></table>" +ALIASES += sign_prop="<table><tr><td>#H5T_SGN_NONE</td><td>0</td><td>Unsigned integer type</td></tr><tr><td>#H5T_SGN_2</td><td>1</td><td>Two's complement signed integer type</td></tr></table>" +ALIASES += storage_type="<table><tr><td>#H5G_STORAGE_TYPE_COMPACT</td><td>Compact storage</td></tr><tr><td>#H5G_STORAGE_TYPE_DENSE</td><td>Indexed storage</td></tr><tr><td>#H5G_STORAGE_TYPE_SYMBOL_TABLE</td><td>Symbol tables, the original HDF5 structure</td></tr></table>" +ALIASES += str_pad_type="<table><tr><td>#H5T_STR_NULLTERM</td><td>0</td><td>Null terminate (as C does)</td></tr><tr><td>#H5T_STR_NULLPAD</td><td>1</td><td>Pad with zeros</td></tr><tr><td>#H5T_STR_SPACEPAD</td><td>2</td><td>Pad with spaces (as FORTRAN does)</td></tr></table>" +ALIASES += virtual=" \see Supporting Functions: \li H5Pget_layout() \li H5Pset_layout() \li H5Sget_regular_hyperslab() \li H5Sis_regular_hyperslab() \li H5Sselect_hyperslab() \see VDS Functions: \li H5Pget_virtual_count() \li H5Pget_virtual_dsetname() \li H5Pget_virtual_filename() \li H5Pget_virtual_prefix() \li H5Pget_virtual_printf_gap() \li H5Pget_virtual_srcspace() \li H5Pget_virtual_view() \li H5Pget_virtual_vspace() \li H5Pset_virtual \li H5Pset_virtual_prefix() \li H5Pset_virtual_printf_gap() \li H5Pset_virtual_view()" +ALIASES += obj_info_fields="<table><tr><th>Flag</th><th>Purpose</th></tr><tr><td>#H5O_INFO_BASIC</td><td>Fill in the fileno, addr, type, and rc fields</td></tr><tr> <td>#H5O_INFO_TIME</td><td>Fill in the atime, mtime, ctime, and btime fields</td></tr><tr> <td>#H5O_INFO_NUM_ATTRS</td> <td>Fill in the num_attrs field</td></tr><tr><td>#H5O_INFO_HDR</td><td>Fill in the num_attrs field</td></tr><tr><td>#H5O_INFO_META_SIZE</td><td>Fill in the meta_size field</td></tr><tr><td>#H5O_INFO_ALL</td><td>#H5O_INFO_BASIC | #H5O_INFO_TIME | #H5O_INFO_NUM_ATTRS | #H5O_INFO_HDR | #H5O_INFO_META_SIZE</td></tr></table>" diff --git a/doxygen/dox/H5Acreate.dox b/doxygen/dox/H5Acreate.dox new file mode 100644 index 0000000..18d648f --- /dev/null +++ b/doxygen/dox/H5Acreate.dox @@ -0,0 +1,9 @@ +/** + * \ingroup H5A + * \def H5Acreate() + * H5Acreate() is a macro that is mapped to either H5Acreate1() or + * H5Acreate2(). + * + * + * \todo Standardize the way we describe these macros! + */ diff --git a/doxygen/dox/H5Aiterate.dox b/doxygen/dox/H5Aiterate.dox new file mode 100644 index 0000000..46b9bb4 --- /dev/null +++ b/doxygen/dox/H5Aiterate.dox @@ -0,0 +1,9 @@ +/** + * \ingroup H5A + * \def H5Aiterate() + * H5Aiterate() is a macro that is mapped to either H5Aiterate1() or + * H5Aiterate2(). + * + * + * \todo Standardize the way we describe these macros! + */ diff --git a/doxygen/dox/H5Fget_info.dox b/doxygen/dox/H5Fget_info.dox new file mode 100644 index 0000000..b2eeb6c --- /dev/null +++ b/doxygen/dox/H5Fget_info.dox @@ -0,0 +1,47 @@ +/** + * \ingroup H5F + * \def H5Fget_info() + * H5Fget_info() is a macro that is mapped to either H5Fget_info1() + * or H5Fget_info2(), depending on the needs of the application. + * Similarly, the macro for the \ref H5F_info_t struct is mapped to either + * H5F_info1_t or H5F_info2_t. + * + * Such macros are provided to facilitate application + * compatibility. Their use and mappings are fully described in "API Compatibility + * Macros in HDF5". + * + * When both the HDF5 library and the application are built and installed with + * no specific compatibility flags, H5Fget_info() is mapped to the most recent + * version of the function, currently H5Fget_info2(). If the library and/or + * application is compiled for Release 1.8 emulation, H5Fget_info() will be + * mapped to H5Fget_info1(). Since there was no H5Fget_info() function in + * Release 1.6, if the library and/or application is compiled for Release 1.6 + * emulation, H5Fget_info() will be mapped to the most recent version of the + * function, currently H5Fget_info2(). Function-specific flags are available to + * override these settings on a function-by-function basis when the application + * is compiled. + * + * Specific compile-time compatibility flags and the resulting + * mappings are as follows: + * + * \Bold{Global settings}\n + * \li No compatibility flag: H5Fget_info2() and H5F_info2_t + * \li Enable deprecated symbols: H5Fget_info2() and H5F_info2_t + * \li Disable deprecated symbols: H5Fget_info2() and H5F_info2_t + * \li Emulate Release 1.6 interface: H5Fget_info2() and H5F_info2_t + * \li Emulate Release 1.8 interface: H5Fget_info1() and H5F_info1_t + * + * \Bold{Function- and struct-level macros}\n + * \li \Code{H5Fget_info_vers=2}: H5Fget_info2() + * \li \Code{H5Fget_info_vers=1}: H5Fget_info1() + * \li \Code{H5F_info_t_vers=2}: H5F_info2_t + * \li \Code{H5F_info_t_vers=1}: H5F_info1_t + * + * \todo Fix the reference. + * + * \version 1.10.0 The C function H5Fget_info() and H5F_info_t renamed to + * H5Fget_info1() and H5F_info1_t, respectively, and deprecated + * in this release. The C macro #H5Fget_info, the C function + * H5Fget_info2(), and the struct H5F_info2_t introduced in this + * release. + */ diff --git a/doxygen/dox/H5Lget_info.dox b/doxygen/dox/H5Lget_info.dox new file mode 100644 index 0000000..686dfe4 --- /dev/null +++ b/doxygen/dox/H5Lget_info.dox @@ -0,0 +1,18 @@ + /** + * \ingroup LMGT + * \def H5Lget_info() + * H5Lget_info() is a macro that is mapped to either H5Lget_info1() + * or H5Lget_info2() Such macros are provided to facilitate application + * compatibility. Their use and mappings are fully described in Compatibility + * Macros in HDF5. If the library and/or application is compiled for Release + * 1.12 emulation, H5Lget_info() will be mapped to H5Lget_info2() and + * H5Lget_info1() is deprecated. With earlier versions, H5Lget_info() is mapped to + * H5Lget_info1(). Specific compile-time compatibility flags and the resulting + * mappings are as follows: + * \li No compatibility flag: H5Lget_info2() (using 1.12 source) H5Lget_info1() + * (using 1.10 or 1.8 source) + * \li Emulate Release 1.12: H5Lget_info2() + * \li Emulate Release 1.8 or 1.10 interface: H5Lget_info1() + * + * \todo Fix the reference. + */ diff --git a/doxygen/dox/H5Lget_info_by_idx.dox b/doxygen/dox/H5Lget_info_by_idx.dox new file mode 100644 index 0000000..8f1511e --- /dev/null +++ b/doxygen/dox/H5Lget_info_by_idx.dox @@ -0,0 +1,18 @@ + /** + * \ingroup LMGT + * \def H5Lget_info_by_idx() + * H5Lget_info_by_idx() is a macro that is mapped to either H5Lget_info_by_idx1() + * or H5Lget_info_by_idx2() Such macros are provided to facilitate application + * compatibility. Their use and mappings are fully described in Compatibility + * Macros in HDF5. If the library and/or application is compiled for Release + * 1.12 emulation, H5Lget_info_by_idx() will be mapped to H5Lget_info_by_idx2() and + * H5Lget_info_by_idx1() is deprecated. With earlier versions, H5Lget_infoby_idx() is mapped to + * H5Lget_info_by_idx1(). Specific compile-time compatibility flags and the resulting + * mappings are as follows: + * \li No compatibility flag: H5Lget_info_by_idx2() (using 1.12 source) H5Lget_info_by_idx1() + * (using 1.10 or 1.8 source) + * \li Emulate Release 1.12: H5Lget_info_by_idx2() + * \li Emulate Release 1.8 or 1.10 interface: H5Lget_info_by_idx1() + * + * \todo Fix the reference. + */ diff --git a/doxygen/dox/H5Literate.dox b/doxygen/dox/H5Literate.dox new file mode 100644 index 0000000..4d3a8dc --- /dev/null +++ b/doxygen/dox/H5Literate.dox @@ -0,0 +1,22 @@ +/** + * \ingroup TRAV + * \def H5Literate() + * H5Literate() is a macro that is mapped to either H5Literate1() or + * H5Literate2() Such macros are provided to facilitate application + * compatibility. Their use and mappings are fully described in + * Compatibility Macros in HDF5. If the library and/or application is + * compiled for Release 1.12 emulation, H5Literate() will be mapped to + * H5Literate2() and H5Literate1() is deprecated. With earlier versions, + * H5Literate() is mapped to H5Literate1(). Specific compile-time compatibility + * flags and the resulting mappings are as follows: + * \li No compatibility flag: H5Literate2() (using 1.12 source) H5Literate1() + * (using 1.10 or 1.8 source) + * \li Emulate Release 1.12: H5Literate2() + * \li Emulate Release 1.8 or 1.10 interface: H5Literate1() + * + * \todo Fix the reference. + * + * \version 1.12.0 The function H5Literate() was renamed to H5Literate1() and + * deprecated in this release. The macro H5Literate() and the + * function H5Literate2() were introduced in this release. + */ diff --git a/doxygen/dox/H5Literate_by_name.dox b/doxygen/dox/H5Literate_by_name.dox new file mode 100644 index 0000000..174157a --- /dev/null +++ b/doxygen/dox/H5Literate_by_name.dox @@ -0,0 +1,23 @@ +/** + * \ingroup TRAV + * \def H5Literate_by_name() + * H5Literate_by_name() is a macro that is mapped to either + * H5Literate_by_name1() or H5Literate_by_name2() Such macros are provided to + * facilitate application compatibility. Their use and mappings are fully + * described in Compatibility Macros in HDF5. If the library and/or application is + * compiled for Release 1.12 emulation, H5Literate_by_name() will be mapped to + * H5Literate_by_name2() and H5Literate_by_name1() is deprecated. With earlier + * versions, H5Literate_by_name() is mapped to H5Literate_by_name1(). + * Specific compile-time compatibility flags and the resulting mappings are as + * follows: + * \li No compatibility flag: H5Literate_by_name2() (using 1.12 source) + * H5Literate_by_name1() (using 1.10 or 1.8 source) + * \li Emulate Release 1.12: H5Literate_by_name2() + * \li Emulate Release 1.8 or 1.10 interface: H5Literate_by_name1() + * + * \todo Fix the reference. + * + * \version 1.12.0 The function H5Literate_by_name() was renamed to H5Literate_by_name1() and + * deprecated in this release. The macro H5Literate_by_name() and the + * function H5Literate_by_name2() were introduced in this release. + */ diff --git a/doxygen/dox/H5Lvisit.dox b/doxygen/dox/H5Lvisit.dox new file mode 100644 index 0000000..e356576 --- /dev/null +++ b/doxygen/dox/H5Lvisit.dox @@ -0,0 +1,22 @@ +/** + * \ingroup TRAV + * \def H5Lvisit() + * H5Lvisit() is a macro that is mapped to either H5Lvisit1() or + * H5Lvisit2() Such macros are provided to facilitate application + * compatibility. Their use and mappings are fully described in + * Compatibility Macros in HDF5. If the library and/or application is + * compiled for Release 1.12 emulation, H5Lvisit() will be mapped to + * H5Lvisit2() and H5Lvisit1() is deprecated. With earlier versions, + * H5Lvisit() is mapped to H5Lvisit1(). Specific compile-time compatibility + * flags and the resulting mappings are as follows: + * \li No compatibility flag: H5Lvisit2() (using 1.12 source) H5Lvisit1() + * (using 1.10 or 1.8 source) + * \li Emulate Release 1.12: H5Lvisit2() + * \li Emulate Release 1.8 or 1.10 interface: H5Lvisit1() + * + * \todo Fix the reference. + * + * \version 1.12.0 The function H5Lvisit() was renamed to H5Lvisit1() and + * deprecated in this release. The macro H5Lvisit() and the + * function H5Lvisit2() were introduced in this release. + */ diff --git a/doxygen/dox/H5Lvisit_by_name.dox b/doxygen/dox/H5Lvisit_by_name.dox new file mode 100644 index 0000000..0bb482e --- /dev/null +++ b/doxygen/dox/H5Lvisit_by_name.dox @@ -0,0 +1,22 @@ +/** + * \ingroup TRAV + * \def H5Lvisit_by_name() + * H5Lvisit_by_name() is a macro that is mapped to either H5Lvisit_by_name1() or + * H5Lvisit_by_name2() Such macros are provided to facilitate application + * compatibility. Their use and mappings are fully described in + * Compatibility Macros in HDF5. If the library and/or application is + * compiled for Release 1.12 emulation, H5Lvisit_by_name() will be mapped to + * H5Lvisit_by_name2() and H5Lvisit_by_name1() is deprecated. With earlier versions, + * H5Lvisit_by_name() is mapped to H5Lvisit_by_name1(). Specific compile-time + * compatibility flags and the resulting mappings are as follows: + * \li No compatibility flag: H5Lvisit_by_name2() (using 1.12 source) H5Lvisit_by_name1() + * (using 1.10 or 1.8 source) + * \li Emulate Release 1.12: H5Lvisit_by_name2() + * \li Emulate Release 1.8 or 1.10 interface: H5Lvisit_by_name1() + * + * \todo Fix the reference. + * + * \version 1.12.0 The function H5Lvisit_by_name() was renamed to H5Lvisit_by_name1() and + * deprecated in this release. The macro H5Lvisit_by_name() and the + * function H5Lvisit_by_name2() were introduced in this release. + */ diff --git a/doxygen/dox/H5Oget_info.dox b/doxygen/dox/H5Oget_info.dox new file mode 100644 index 0000000..e8b7afa --- /dev/null +++ b/doxygen/dox/H5Oget_info.dox @@ -0,0 +1,121 @@ +/** + * \ingroup H5O + * \def H5Oget_info() + * + * #H5Oget_info is a macro that is mapped to: + * \li H5Oget_info3() + * \li H5Oget_info1() + * + * \details Such macros are provided to facilitate application + * compatibility. Their use and mappings are fully described in + * API Compatibility Macros in HDF5; we urge you to read that + * document closely. + * + * In HDF5 versions 1.12 and after, #H5Oget_info is mapped to + * \ref H5Oget_info3() and \ref H5Oget_info1() is deprecated. + * In version 1.10 #H5Oget_info is identical to \ref H5Oget_info1(). + * + * Specific compile-time compatibility flags and the resulting + * mappings are as follows: + * \par + * <table> + * <tr> + * <th>Compatibility setting</th> + * <th>H5Oget_info</th> + * </tr> + * <tr> + * <td>No compatibility flag</td> + * <td>\ref H5Oget_info3() (in release 1.12)</td> + * </tr> + * <tr> + <td></td> + * <td>\ref H5Oget_info1() (in 1.8 or 1.10)</td> + * </tr> + * <tr> + * <td>Emulate Release 1.12</td> + * <td>\ref H5Oget_info3()</td> + * </tr> + * <tr> + * <td>Emulate Release 1.10/1.8 interface</td> + * <td>\ref H5Oget_info1()</td> + * </tr> + * </table> + * + * \note If you are iterating through a lot of different objects to + * retrieve information via the H5Oget_info() family of routines, + * you may see memory building up. This can be due to memory + * allocation for metadata such as object headers and messages + * when the iterated objects are put into the metadata cache. + * \note + * If the memory buildup is not desirable, you can configure a + * smaller cache via H5Fset_mdc_config() or set the file access + * property list via H5Pset_mdc_config(). A smaller sized cache + * will force metadata entries to be evicted from the cache, + * thus freeing the memory associated with the entries. + * + * \todo Fix reference to the document + * + * \par Version + * <table> + * <tr> + * <th>Release</th> + * <th>Change</th> + * </tr> + * <tr> + * <td>1.12.0</td> + * <td>The macro #H5Oget_info and the function \ref H5Oget_info3() were added, + * and \ref H5Oget_info1() was deprecated.</td> + * </tr> + * <tr> + * <td>1.10.5</td> + * <td>The macro #H5Oget_info was removed.</td> + * </tr> + * <tr> + * <td></td> + * <td>The functions \ref H5Oget_info1() and + * #H5Oget_info are identical in this release.</td> + * </tr> + * <tr> + * <td></td> + * <td>This change was added to restore the broken API compatibility + * introduced in HDF5-1.10.3.</td> + * </tr> + * <tr> + * <td>1.10.3</td> + * <td>The function \ref H5Oget_info() was renamed \ref H5Oget_info1.</td> + * </tr> + * <tr> + * <td></td> + * <td>The macro #H5Oget_info and the function \ref H5Oget_info2() were + * introduced in this release.</td> + * </tr> + * <tr> + * <td>1.8.15</td> + * <td>Added a note about the valid values for the \c version field in + * the \ref H5O_hdr_info_t structure.</td> + * </tr> + * <tr> + * <td>1.8.11</td> + * <td>Fortran subroutine introduced in this release.</td> + * </tr> + * <tr> + * <td>1.8.10</td> + * <td>Added \ref H5O_type_t structure to the Description section.</td> + * </tr> + * <tr> + * <td></td> + * <td>Separated \ref H5O_hdr_info_t structure from \ref H5O_info_t + * in the Description section.</td> + * </tr> + * <tr> + * <td></td> + * <td>Clarified the definition and implementation of the time fields.</td> + * </tr> + * <tr> + * <td>1.8.0</td> + * <td>Function introduced in this release.</td> + * </tr> + * </table> + * + * + */ diff --git a/doxygen/dox/H5Oget_info_by_idx.dox b/doxygen/dox/H5Oget_info_by_idx.dox new file mode 100644 index 0000000..2598374 --- /dev/null +++ b/doxygen/dox/H5Oget_info_by_idx.dox @@ -0,0 +1,92 @@ +/** + * \ingroup H5O + * \def H5Oget_info_by_idx() + * + * #H5Oget_info_by_idx is a macro that is mapped to: + * \li H5Oget_info_by_idx3() + * \li H5Oget_info_by_idx1() + * + * \details Such macros are provided to facilitate application + * compatibility. Their use and mappings are fully described in + * API Compatibility Macros in HDF5; we urge you to read that + * document closely. + * + * In HDF5 versions 1.12 and after, #H5Oget_info_by_idx is mapped to + * \ref H5Oget_info_by_idx3() and \ref H5Oget_info_by_idx1() is deprecated. + * In version 1.10 #H5Oget_info_by_idx is identical to \ref H5Oget_info_by_idx1(). + * + * Specific compile-time compatibility flags and the resulting + * mappings are as follows: + * + * \par + * <table> + * <tr> + * <th>Compatibility setting</th> + * <th>H5Oget_info_by_idx</th> + * </tr> + * <tr> + * <td>No compatibility flag</td> + * <td>\ref H5Oget_info_by_idx3() for 1.12</td> + * </tr> + * <tr> + <td></td> + * <td>\ref H5Oget_info_by_idx1() for 1.8/1.10</td> + * </tr> + * <tr> + * <td>Emulate Release 1.12</td> + * <td>\ref H5Oget_info_by_idx3()</td> + * </tr> + * <tr> + * <td>Emulate Release 1.10/1.8 interface</td> + * <td>\ref H5Oget_info_by_idx1()</td> + * </tr> + * </table> + * + * \todo Fix reference to the document + * + * \par Version + * <table> + * <tr> + * <th>Release</th> + * <th>Change</th> + * </tr> + * <tr> + * <td>1.12.0</td> + * <td>The macro #H5Oget_info_by_idx and function \ref H5Oget_info_by_idx3() were added, + * and \ref H5Oget_info_by_idx1() was deprecated.</td> + * </tr> + * <tr> + * <td>1.10.5</td> + * <td>The macro #H5Oget_info_by_idx was removed.</td> + * </tr> + * <tr> + * <td></td> + * <td>The functions \ref H5Oget_info_by_idx() and + * H5Oget_info_by_idx1() are identical in this release.</td> + * </tr> + * <tr> + * <td></td> + * <td>This change was added to restore the broken API compatibility + * introduced in HDF5-1.10.3.</td> + * </tr> + * <tr> + * <td>1.10.3</td> + * <td>The function \ref H5Oget_info_by_idx() was renamed \ref H5Oget_info_by_idx1.</td> + * </tr> + * <tr> + * <td></td> + * <td>The macro #H5Oget_info_by_idx and the function \ref H5Oget_info_by_idx2() were + * introduced in this release.</td> + * </tr> + * <tr> + * <td>1.8.11</td> + * <td>Fortran subroutine introduced in this release.</td> + * </tr> + * <tr> + * <td>1.8.0</td> + * <td>Function introduced in this release.</td> + * </tr> + * </table> + * + * + */ diff --git a/doxygen/dox/H5Oget_info_by_name.dox b/doxygen/dox/H5Oget_info_by_name.dox new file mode 100644 index 0000000..3276c5a --- /dev/null +++ b/doxygen/dox/H5Oget_info_by_name.dox @@ -0,0 +1,99 @@ +/** + * \ingroup H5O + * \def H5Oget_info_by_name() + * + * #H5Oget_info_by_name is a macro that is mapped to: + * \li H5Oget_info_by_name3() + * \li H5Oget_info_by_name1() + * + * \details Such macros are provided to facilitate application + * compatibility. Their use and mappings are fully described in + * API Compatibility Macros in HDF5; we urge you to read that + * document closely. + * + * In HDF5 versions 1.12 and after, #H5Oget_info_by_name is mapped to + * \ref H5Oget_info_by_name3(). In version 1.10 #H5Oget_info_by_name is + * identical to \ref H5Oget_info_by_name1(). + * + * Specific compile-time compatibility flags and the resulting + * mappings are as follows: + * + * \par + * <table> + * <tr> + * <th>Compatibility setting</th> + * <th>H5Oget_info_by_name</th> + * </tr> + * <tr> + * <td>No compatibility flag</td> + * <td>\ref H5Oget_info_by_name3() for 1.12 and above</td> + * </tr> + * <tr> + <td></td> + * <td>\ref H5Oget_info_by_name1() for 1.8 or 1.10</td> + * </tr> + * <tr> + * <td>Emulate Release 1.12</td> + * <td>\ref H5Oget_info_by_name3()</td> + * </tr> + * <tr> + * <td>Emulate Release 1.10 or 1.8 interface</td> + * <td>\ref H5Oget_info_by_name1()</td> + * </tr> + * </table> + * + * \todo Fix reference to the document; exchange 1.8.8 and 1.8.0 + * + * \par Version + * <table> + * <tr> + * <th>Release</th> + * <th>Change</th> + * </tr> + * <tr> + * <td>1.12.0</td> + * <td>The macro #H5Oget_info_by_name and function \ref H5Oget_info_by_name3() were added + * and \ref H5Oget_info_by_name1() was deprecated.</td> + * </tr> + * <tr> + * <td>1.10.5</td> + * <td>The macro #H5Oget_info_by_name was removed.</td> + * </tr> + * <tr> + * <td></td> + * <td>The functions \ref H5Oget_info_by_name() and + * H5Oget_info_by_name1() are identical in this release.</td> + * </tr> + * <tr> + * <td></td> + * <td>This change was added to restore the broken API compatibility + * introduced in HDF5-1.10.3.</td> + * </tr> + * <tr> + * <td>1.10.3</td> + * <td>The function \ref H5Oget_info_by_name() was renamed + * to \ref H5Oget_info_by_name1.</td> + * </tr> + * <tr> + * <td></td> + * <td>The macro #H5Oget_info_by_name was renamed to + * \ref H5Oget_info_by_name1().</td> + * </tr> + * <tr> + * <td></td> + * <td>The macro #H5Oget_info_by_name and the function \ref H5Oget_info_name2() + * were introduced in this release.</td> + * </tr> + * <tr> + * <td>1.8.8</td> + * <td>Fortran 2003 subroutine and \ref h5o_info_t derived + * type introduced in this release.</td> + * </tr> + * <tr> + * <td>1.8.0</td> + * <td>C function introduced in this release.</td> + * </tr> + * </table> + * + * + */ diff --git a/doxygen/dox/H5Ovisit.dox b/doxygen/dox/H5Ovisit.dox new file mode 100644 index 0000000..5030a13 --- /dev/null +++ b/doxygen/dox/H5Ovisit.dox @@ -0,0 +1,92 @@ +/** + * \ingroup H5O + * \def H5Ovisit() + * + * #H5Ovisit is a macro that is mapped to one of the following: + * \li H5Ovisit3() + * \li H5Ovisit1() + * + * \details Such macros are provided to facilitate application + * compatibility. Their use and mappings are fully described in + * API Compatibility Macros in HDF5; we urge you to read that + * document closely. + * + * In HDF5 versions 1.12 and after, \ref H5Ovisit() is mapped to + * \ref H5Ovisit3(). In version 1.10, \ref H5Ovisit() is identical + * to \ref H5Ovisit1(). + * + * Specific compile-time compatibility flags and the resulting + * mappings are as follows: + * + * \par + * <table> + * <tr> + * <th>Compatibility settings</th> + * <th>H5Ovisit</th> + * </tr> + * <tr> + * <td>No compatibility flag</td> + * <td>\ref H5Ovisit3() in 1.12 or after</td> + * </tr> + * <tr> + <td></td> + * <td>\ref H5Ovisit1() for 1.8 and 1.10</td> + * </tr> + * <tr> + * <td>Emulate Release 1.12</td> + * <td>\ref H5Ovisit3()</td> + * </tr> + * <tr> + * <td>Emulate Release 1.10 or 1.8 interface</td> + * <td>\ref H5Ovisit1()</td> + * </tr> + * </table> + * + * \todo Fix reference to the document + * + * \par Version + * <table> + * <tr> + * <th>Release</th> + * <th>Change</th> + * </tr> + * <tr> + * <td>1.12.0</td> + * <td>The macro #H5Ovisit and function \ref H5Ovisit3() were added, + * and \ref H5Ovisit1() was deprecated.</td> + * </tr> + * <tr> + * <td>1.10.5</td> + * <td>The macro #H5Ovisit was removed.</td> + * </tr> + * <tr> + * <td></td> + * <td>The functions \ref H5Ovisit() and + * H5Ovisit1() are identical in this release.</td> + * </tr> + * <tr> + * <td></td> + * <td>This change was added to restore the broken API compatibility + * introduced in HDF5-1.10.3.</td> + * </tr> + * <tr> + * <td>1.10.3</td> + * <td>The function \ref H5Ovisit() was renamed to \ref H5Ovisit1.</td> + * </tr> + * <tr> + * <td></td> + * <td>The macro #H5Ovisit and the function \ref H5Ovisit2() were + * introduced in this release.</td> + * </tr> + * <tr> + * <td>1.8.8</td> + * <td>Fortran subroutine and data structure added.</td> + * </tr> + * <tr> + * <td>1.8.0</td> + * <td>C function introduced.</td> + * </tr> + * </table> + * + * + */ diff --git a/doxygen/dox/H5Ovisit_by_name.dox b/doxygen/dox/H5Ovisit_by_name.dox new file mode 100644 index 0000000..5c6e51a --- /dev/null +++ b/doxygen/dox/H5Ovisit_by_name.dox @@ -0,0 +1,92 @@ +/** + * \ingroup H5O + * \def H5Ovisit_by_name() + * + * #H5Ovisit_by_name is a macro that is mapped to one of the following: + * \li H5Ovisit_by_name3() + * \li H5Ovisit_by_name1() + * + * \details Such macros are provided to facilitate application + * compatibility. Their use and mappings are fully described in + * API Compatibility Macros in HDF5; we urge you to read that + * document closely. + * + * In HDF5 versions 1.12 and after, \ref H5Ovisit_by_name() is mapped to + * \ref H5Ovisit_by_name3(). In version 1.10, \ref H5Ovisit_by_name() + * is identical to \ref H5Ovisit_by_name1(). + * + * Specific compile-time compatibility flags and the resulting + * mappings are as follows: + * + * \par + * <table> + * <tr> + * <th>Compatibility settings</th> + * <th>H5Ovisit_by_name</th> + * </tr> + * <tr> + * <td>No compatibility flag</td> + * <td>\ref H5Ovisit_by_name3() for 1.12 and above</td> + * </tr> + * <tr> + <td></td> + * <td>\ref H5Ovisit_by_name1() for 1.10 or 1.8</td> + * </tr> + * <tr> + * <td>Emulate Release 1.12 interface</td> + * <td>\ref H5Ovisit_by_name3()</td> + * </tr> + * <tr> + * <td>Emulate Release 1.10 or 1.8 interface</td> + * <td>\ref H5Ovisit_by_name1()</td> + * </tr> + * </table> + * + * \todo Fix reference to the document + * + * \par Version + * <table> + * <tr> + * <th>Release</th> + * <th>Change</th> + * </tr> + * <tr> + * <td>1.12.0</td> + * <td>The macro #H5Ovisit_by_name and function \ref H5Ovisit_by_name3() were added. + * </tr> + * <tr> + * <td>1.10.5</td> + * <td>The macro #H5Ovisit_by_name was removed.</td> + * </tr> + * <tr> + * <td></td> + * <td>The functions \ref H5Ovisit_by_name() and + * H5Ovisit_by_name1() are identical in this release.</td> + * </tr> + * <tr> + * <td></td> + * <td>This change was added to restore the broken API compatibility + * introduced in HDF5-1.10.3.</td> + * </tr> + * <tr> + * <td>1.10.3</td> + * <td>The function \ref H5Ovisit_by_name() was renamed + * to \ref H5Ovisit_by_name1.</td> + * </tr> + * <tr> + * <td></td> + * <td>The macro #H5Ovisit_by_name and the function \ref H5Ovisit_by_name2() + * were introduced in this release.</td> + * </tr> + * <tr> + * <td>1.8.8</td> + * <td>Fortran subroutine introduced in this release.</td> + * </tr> + * <tr> + * <td>1.8.0</td> + * <td>Function introduced in this release.</td> + * </tr> + * </table> + * + * + */ diff --git a/doxygen/dox/H5Sencode.dox b/doxygen/dox/H5Sencode.dox new file mode 100644 index 0000000..fe0995c --- /dev/null +++ b/doxygen/dox/H5Sencode.dox @@ -0,0 +1,5 @@ +/** + * \ingroup H5S + * \def H5Sencode() + * H5Sencode() is a macro that is mapped to either H5Sencode1() or H5Sencode2(). +*/ diff --git a/doxygen/dox/mainpage.dox b/doxygen/dox/mainpage.dox new file mode 100644 index 0000000..f1949e4 --- /dev/null +++ b/doxygen/dox/mainpage.dox @@ -0,0 +1,36 @@ +/*! \mainpage API Documentation for HDF5 Version 1.13 (Draft) + * + * \todo Fix the search form for server deployments. + * \todo Make it mobile-friendly + * + * \section intro_sec Introduction + * + * \todo Write an introduction. + * + * \section quick_links Quick Links + * + * <ul> + * <li>\ref PDT "Predefined Datatypes"</li> + * <li><a href="https://portal.hdfgroup.org/display/HDF5/API+Compatibility+Macros">API Compatibility Macros</a></li> + * <li><a href="https://hdf5.wiki/">HDF5 Wiki</a></li> + * </ul> + * + * \section using_locations The Use of Locations (Identifier + Name) in the HDF5 API + * + * \todo Make this crystal clear! + * + * \section cpp_note Programming Note for C++ Developers Using C Functions + * + * If a C routine that takes a function pointer as an argument is called from + * within C++ code, the C routine should be returned from normally. + * + * Examples of this kind of routine include callbacks such as H5Pset_elink_cb() + * and H5Pset_type_conv_cb() and functions such as H5Tconvert() and H5Ewalk2(). + * + * Exiting the routine in its normal fashion allows the HDF5 C library to clean + * up its work properly. In other words, if the C++ application jumps out of + * the routine back to the C++ \c catch statement, the library is not given the + * opportunity to close any temporary data structures that were set up when the + * routine was called. The C++ application should save some state as the + * routine is started so that any problem that occurs might be diagnosed. + */ diff --git a/doxygen/dox/rm-template.dox b/doxygen/dox/rm-template.dox new file mode 100644 index 0000000..64e4770 --- /dev/null +++ b/doxygen/dox/rm-template.dox @@ -0,0 +1,72 @@ +/**\ingroup H5XYZ + * + * \brief A synopsis of what H5XYZgreat_function does + * + * \param[in] name1 Description of IN parameter \p name1 + * \param[out] name2 Description of OUT parameter \p name2 + * \param[in,out] name3 Description of INOUT parameter \p name3 + * + * \return Returns what you always wanted + * + * \pre Describe preconditions for an entity. Can be repreated. + * + * \invariant Describe invariants for an entity. Can be repeated. + * + * \post Describe postconditions for an entity. Can be repreated. + * + * \deprecated This was my favorite function while it lasted. + * + * \details Describe the normal behavior flow of the function here. Try to be + * helpful! + * + * Make reference to other functions like this: H5Fopen(). + * + * Make reference to formal parameters like this: \p name1 + * + * Make reference to macros like this: #H5P_DEFAULT. + * + * Make reference to enumeration constants like this: #H5F_CLOSE_WEAK. + * + * Include code snippets like this: + * \snippet H5Zpublic.h H5Z_class2_t_snip + * + * Lists are supported: + * - mouse events + * -# mouse move event + * -# mouse click event\n + * More info about the click event. + * -# mouse double click event + * - keyboard events + * 1. key down event + * 2. key up event + * + * The distance between \f$(x_1,y_1)\f$ and \f$(x_2,y_2)\f$ is + * \f$\sqrt{(x_2-x_1)^2+(y_2-y_1)^2}\f$.\n + * For tables, see + * <a href="https://www.doxygen.nl/manual/tables.html">this example</a>. + * + * This is an example of how to use the H5XYZgreat_function().\n + * The contents of the file hello_hdf5.c will be included. + * \include hello_hdf5.c + * + * \note Dear reader, ... + * + * \attention Colorless green ideas sleep furiously. + * + * \warning Don't do this at home! + * + * \author This function was written by an esteemed author. Repeat this + * command for multiple authors. + * + * \date Record the function's birthdate! + * + * \since 1.MAJOR.MINOR The 'since' command can also be used to record a + * function's introduction (via its initial release + * version). + * + * \version 1.MAJOR.MINOR An important event in the version history of this + * function. There can be multiple such events. + * + * \see H5XYZanother_great_function(), H5XYZnot_so_great_a_function() + * + */ diff --git a/doxygen/examples/H5Fclose.c b/doxygen/examples/H5Fclose.c new file mode 100644 index 0000000..6bb1d9f --- /dev/null +++ b/doxygen/examples/H5Fclose.c @@ -0,0 +1,12 @@ +#include "hdf5.h" + +int main() +{ + hid_t file; + if ((file = H5Fcreate("foo.h5", H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT)) < 0) + return -1; + /* Do something good with this file. */ + if(H5Fclose(file) < 0) + return -2; + return 0; +} diff --git a/doxygen/examples/H5Fcreate.c b/doxygen/examples/H5Fcreate.c new file mode 100644 index 0000000..6bb1d9f --- /dev/null +++ b/doxygen/examples/H5Fcreate.c @@ -0,0 +1,12 @@ +#include "hdf5.h" + +int main() +{ + hid_t file; + if ((file = H5Fcreate("foo.h5", H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT)) < 0) + return -1; + /* Do something good with this file. */ + if(H5Fclose(file) < 0) + return -2; + return 0; +} diff --git a/doxygen/examples/hello_hdf5.c b/doxygen/examples/hello_hdf5.c new file mode 100644 index 0000000..56a179c --- /dev/null +++ b/doxygen/examples/hello_hdf5.c @@ -0,0 +1,12 @@ +#include "hdf5.h" + +int main() +{ + herr_t retval; + unsigned majnum, minnum, relnum; + + if ((retval = H5get_libversion(&majnum, &minnum, &relnum)) >= 0) { + printf("Hello, HDF5 %d.%d.%d!\n", majnum, minnum, relnum); + } + return retval; +} diff --git a/doxygen/img/HDFG-logo.png b/doxygen/img/HDFG-logo.png Binary files differnew file mode 100644 index 0000000..a2d52a9 --- /dev/null +++ b/doxygen/img/HDFG-logo.png diff --git a/m4/ax_prog_doxygen.m4 b/m4/ax_prog_doxygen.m4 new file mode 100644 index 0000000..44b22b0 --- /dev/null +++ b/m4/ax_prog_doxygen.m4 @@ -0,0 +1,532 @@ +# =========================================================================== +# http://www.gnu.org/software/autoconf-archive/ax_prog_doxygen.html +# =========================================================================== +# +# SYNOPSIS +# +# DX_INIT_DOXYGEN(PROJECT-NAME, DOXYFILE-PATH, [OUTPUT-DIR]) +# DX_DOXYGEN_FEATURE(ON|OFF) +# DX_DOT_FEATURE(ON|OFF) +# DX_HTML_FEATURE(ON|OFF) +# DX_CHM_FEATURE(ON|OFF) +# DX_CHI_FEATURE(ON|OFF) +# DX_MAN_FEATURE(ON|OFF) +# DX_RTF_FEATURE(ON|OFF) +# DX_XML_FEATURE(ON|OFF) +# DX_PDF_FEATURE(ON|OFF) +# DX_PS_FEATURE(ON|OFF) +# +# DESCRIPTION +# +# The DX_*_FEATURE macros control the default setting for the given +# Doxygen feature. Supported features are 'DOXYGEN' itself, 'DOT' for +# generating graphics, 'HTML' for plain HTML, 'CHM' for compressed HTML +# help (for MS users), 'CHI' for generating a seperate .chi file by the +# .chm file, and 'MAN', 'RTF', 'XML', 'PDF' and 'PS' for the appropriate +# output formats. The environment variable DOXYGEN_PAPER_SIZE may be +# specified to override the default 'a4wide' paper size. +# +# By default, HTML, PDF and PS documentation is generated as this seems to +# be the most popular and portable combination. MAN pages created by +# Doxygen are usually problematic, though by picking an appropriate subset +# and doing some massaging they might be better than nothing. CHM and RTF +# are specific for MS (note that you can't generate both HTML and CHM at +# the same time). The XML is rather useless unless you apply specialized +# post-processing to it. +# +# The macros mainly control the default state of the feature. The use can +# override the default by specifying --enable or --disable. The macros +# ensure that contradictory flags are not given (e.g., +# --enable-doxygen-html and --enable-doxygen-chm, +# --enable-doxygen-anything with --disable-doxygen, etc.) Finally, each +# feature will be automatically disabled (with a warning) if the required +# programs are missing. +# +# Once all the feature defaults have been specified, call DX_INIT_DOXYGEN +# with the following parameters: a one-word name for the project for use +# as a filename base etc., an optional configuration file name (the +# default is 'Doxyfile', the same as Doxygen's default), and an optional +# output directory name (the default is 'doxygen-doc'). +# +# Automake Support +# +# The following is a template aminclude.am file for use with Automake. +# Make targets and variables values are controlled by the various +# DX_COND_* conditionals set by autoconf. +# +# The provided targets are: +# +# doxygen-doc: Generate all doxygen documentation. +# +# doxygen-run: Run doxygen, which will generate some of the +# documentation (HTML, CHM, CHI, MAN, RTF, XML) +# but will not do the post processing required +# for the rest of it (PS, PDF, and some MAN). +# +# doxygen-man: Rename some doxygen generated man pages. +# +# doxygen-ps: Generate doxygen PostScript documentation. +# +# doxygen-pdf: Generate doxygen PDF documentation. +# +# Note that by default these are not integrated into the automake targets. +# If doxygen is used to generate man pages, you can achieve this +# integration by setting man3_MANS to the list of man pages generated and +# then adding the dependency: +# +# $(man3_MANS): doxygen-doc +# +# This will cause make to run doxygen and generate all the documentation. +# +# The following variable is intended for use in Makefile.am: +# +# DX_CLEANFILES = everything to clean. +# +# Then add this variable to MOSTLYCLEANFILES. +# +# ----- begin aminclude.am ------------------------------------- +# +# ## --------------------------------- ## +# ## Format-independent Doxygen rules. ## +# ## --------------------------------- ## +# +# if DX_COND_doc +# +# ## ------------------------------- ## +# ## Rules specific for HTML output. ## +# ## ------------------------------- ## +# +# if DX_COND_html +# +# DX_CLEAN_HTML = @DX_DOCDIR@/html +# +# endif DX_COND_html +# +# ## ------------------------------ ## +# ## Rules specific for CHM output. ## +# ## ------------------------------ ## +# +# if DX_COND_chm +# +# DX_CLEAN_CHM = @DX_DOCDIR@/chm +# +# if DX_COND_chi +# +# DX_CLEAN_CHI = @DX_DOCDIR@/@PACKAGE@.chi +# +# endif DX_COND_chi +# +# endif DX_COND_chm +# +# ## ------------------------------ ## +# ## Rules specific for MAN output. ## +# ## ------------------------------ ## +# +# if DX_COND_man +# +# DX_CLEAN_MAN = @DX_DOCDIR@/man +# +# endif DX_COND_man +# +# ## ------------------------------ ## +# ## Rules specific for RTF output. ## +# ## ------------------------------ ## +# +# if DX_COND_rtf +# +# DX_CLEAN_RTF = @DX_DOCDIR@/rtf +# +# endif DX_COND_rtf +# +# ## ------------------------------ ## +# ## Rules specific for XML output. ## +# ## ------------------------------ ## +# +# if DX_COND_xml +# +# DX_CLEAN_XML = @DX_DOCDIR@/xml +# +# endif DX_COND_xml +# +# ## ----------------------------- ## +# ## Rules specific for PS output. ## +# ## ----------------------------- ## +# +# if DX_COND_ps +# +# DX_CLEAN_PS = @DX_DOCDIR@/@PACKAGE@.ps +# +# DX_PS_GOAL = doxygen-ps +# +# doxygen-ps: @DX_DOCDIR@/@PACKAGE@.ps +# +# @DX_DOCDIR@/@PACKAGE@.ps: @DX_DOCDIR@/@PACKAGE@.tag +# cd @DX_DOCDIR@/latex; \ +# rm -f *.aux *.toc *.idx *.ind *.ilg *.log *.out; \ +# $(DX_LATEX) refman.tex; \ +# $(MAKEINDEX_PATH) refman.idx; \ +# $(DX_LATEX) refman.tex; \ +# countdown=5; \ +# while $(DX_EGREP) 'Rerun (LaTeX|to get cross-references right)' \ +# refman.log > /dev/null 2>&1 \ +# && test $$countdown -gt 0; do \ +# $(DX_LATEX) refman.tex; \ +# countdown=`expr $$countdown - 1`; \ +# done; \ +# $(DX_DVIPS) -o ../@PACKAGE@.ps refman.dvi +# +# endif DX_COND_ps +# +# ## ------------------------------ ## +# ## Rules specific for PDF output. ## +# ## ------------------------------ ## +# +# if DX_COND_pdf +# +# DX_CLEAN_PDF = @DX_DOCDIR@/@PACKAGE@.pdf +# +# DX_PDF_GOAL = doxygen-pdf +# +# doxygen-pdf: @DX_DOCDIR@/@PACKAGE@.pdf +# +# @DX_DOCDIR@/@PACKAGE@.pdf: @DX_DOCDIR@/@PACKAGE@.tag +# cd @DX_DOCDIR@/latex; \ +# rm -f *.aux *.toc *.idx *.ind *.ilg *.log *.out; \ +# $(DX_PDFLATEX) refman.tex; \ +# $(DX_MAKEINDEX) refman.idx; \ +# $(DX_PDFLATEX) refman.tex; \ +# countdown=5; \ +# while $(DX_EGREP) 'Rerun (LaTeX|to get cross-references right)' \ +# refman.log > /dev/null 2>&1 \ +# && test $$countdown -gt 0; do \ +# $(DX_PDFLATEX) refman.tex; \ +# countdown=`expr $$countdown - 1`; \ +# done; \ +# mv refman.pdf ../@PACKAGE@.pdf +# +# endif DX_COND_pdf +# +# ## ------------------------------------------------- ## +# ## Rules specific for LaTeX (shared for PS and PDF). ## +# ## ------------------------------------------------- ## +# +# if DX_COND_latex +# +# DX_CLEAN_LATEX = @DX_DOCDIR@/latex +# +# endif DX_COND_latex +# +# .PHONY: doxygen-run doxygen-doc $(DX_PS_GOAL) $(DX_PDF_GOAL) +# +# .INTERMEDIATE: doxygen-run $(DX_PS_GOAL) $(DX_PDF_GOAL) +# +# doxygen-run: @DX_DOCDIR@/@PACKAGE@.tag +# +# doxygen-doc: doxygen-run $(DX_PS_GOAL) $(DX_PDF_GOAL) +# +# @DX_DOCDIR@/@PACKAGE@.tag: $(DX_CONFIG) $(pkginclude_HEADERS) +# rm -rf @DX_DOCDIR@ +# $(DX_ENV) $(DX_DOXYGEN) $(srcdir)/$(DX_CONFIG) +# +# DX_CLEANFILES = \ +# @DX_DOCDIR@/@PACKAGE@.tag \ +# -r \ +# $(DX_CLEAN_HTML) \ +# $(DX_CLEAN_CHM) \ +# $(DX_CLEAN_CHI) \ +# $(DX_CLEAN_MAN) \ +# $(DX_CLEAN_RTF) \ +# $(DX_CLEAN_XML) \ +# $(DX_CLEAN_PS) \ +# $(DX_CLEAN_PDF) \ +# $(DX_CLEAN_LATEX) +# +# endif DX_COND_doc +# +# ----- end aminclude.am --------------------------------------- +# +# LICENSE +# +# Copyright (c) 2009 Oren Ben-Kiki <oren@ben-kiki.org> +# +# Copying and distribution of this file, with or without modification, are +# permitted in any medium without royalty provided the copyright notice +# and this notice are preserved. This file is offered as-is, without any +# warranty. + +#serial 12 + +## ----------## +## Defaults. ## +## ----------## + +DX_ENV="" +AC_DEFUN([DX_FEATURE_doc], ON) +AC_DEFUN([DX_FEATURE_dot], OFF) +AC_DEFUN([DX_FEATURE_man], OFF) +AC_DEFUN([DX_FEATURE_html], ON) +AC_DEFUN([DX_FEATURE_chm], OFF) +AC_DEFUN([DX_FEATURE_chi], OFF) +AC_DEFUN([DX_FEATURE_rtf], OFF) +AC_DEFUN([DX_FEATURE_xml], OFF) +AC_DEFUN([DX_FEATURE_pdf], ON) +AC_DEFUN([DX_FEATURE_ps], ON) + +## --------------- ## +## Private macros. ## +## --------------- ## + +# DX_ENV_APPEND(VARIABLE, VALUE) +# ------------------------------ +# Append VARIABLE="VALUE" to DX_ENV for invoking doxygen. +AC_DEFUN([DX_ENV_APPEND], [AC_SUBST([DX_ENV], ["$DX_ENV $1='$2'"])]) + +# DX_DIRNAME_EXPR +# --------------- +# Expand into a shell expression prints the directory part of a path. +AC_DEFUN([DX_DIRNAME_EXPR], + [[expr ".$1" : '\(\.\)[^/]*$' \| "x$1" : 'x\(.*\)/[^/]*$']]) + +# DX_IF_FEATURE(FEATURE, IF-ON, IF-OFF) +# ------------------------------------- +# Expands according to the M4 (static) status of the feature. +AC_DEFUN([DX_IF_FEATURE], [ifelse(DX_FEATURE_$1, ON, [$2], [$3])]) + +# DX_REQUIRE_PROG(VARIABLE, PROGRAM) +# ---------------------------------- +# Require the specified program to be found for the DX_CURRENT_FEATURE to work. +AC_DEFUN([DX_REQUIRE_PROG], [ +AC_PATH_TOOL([$1], [$2]) +if test "$DX_FLAG_[]DX_CURRENT_FEATURE$$1" = 1; then + AC_MSG_WARN([$2 not found - will not DX_CURRENT_DESCRIPTION]) + AC_SUBST(DX_FLAG_[]DX_CURRENT_FEATURE, 0) +fi +]) + +# DX_TEST_FEATURE(FEATURE) +# ------------------------ +# Expand to a shell expression testing whether the feature is active. +AC_DEFUN([DX_TEST_FEATURE], [test "$DX_FLAG_$1" = 1]) + +# DX_CHECK_DEPEND(REQUIRED_FEATURE, REQUIRED_STATE) +# ------------------------------------------------- +# Verify that a required features has the right state before trying to turn on +# the DX_CURRENT_FEATURE. +AC_DEFUN([DX_CHECK_DEPEND], [ +test "$DX_FLAG_$1" = "$2" \ +|| AC_MSG_ERROR([doxygen-DX_CURRENT_FEATURE ifelse([$2], 1, + requires, contradicts) doxygen-DX_CURRENT_FEATURE]) +]) + +# DX_CLEAR_DEPEND(FEATURE, REQUIRED_FEATURE, REQUIRED_STATE) +# ---------------------------------------------------------- +# Turn off the DX_CURRENT_FEATURE if the required feature is off. +AC_DEFUN([DX_CLEAR_DEPEND], [ +test "$DX_FLAG_$1" = "$2" || AC_SUBST(DX_FLAG_[]DX_CURRENT_FEATURE, 0) +]) + +# DX_FEATURE_ARG(FEATURE, DESCRIPTION, +# CHECK_DEPEND, CLEAR_DEPEND, +# REQUIRE, DO-IF-ON, DO-IF-OFF) +# -------------------------------------------- +# Parse the command-line option controlling a feature. CHECK_DEPEND is called +# if the user explicitly turns the feature on (and invokes DX_CHECK_DEPEND), +# otherwise CLEAR_DEPEND is called to turn off the default state if a required +# feature is disabled (using DX_CLEAR_DEPEND). REQUIRE performs additional +# requirement tests (DX_REQUIRE_PROG). Finally, an automake flag is set and +# DO-IF-ON or DO-IF-OFF are called according to the final state of the feature. +AC_DEFUN([DX_ARG_ABLE], [ + AC_DEFUN([DX_CURRENT_FEATURE], [$1]) + AC_DEFUN([DX_CURRENT_DESCRIPTION], [$2]) + AC_ARG_ENABLE(doxygen-$1, + [AS_HELP_STRING(DX_IF_FEATURE([$1], [--disable-doxygen-$1], + [--enable-doxygen-$1]), + DX_IF_FEATURE([$1], [don't $2], [$2]))], + [ +case "$enableval" in +#( +y|Y|yes|Yes|YES) + AC_SUBST([DX_FLAG_$1], 1) + $3 +;; #( +n|N|no|No|NO) + AC_SUBST([DX_FLAG_$1], 0) +;; #( +*) + AC_MSG_ERROR([invalid value '$enableval' given to doxygen-$1]) +;; +esac +], [ +AC_SUBST([DX_FLAG_$1], [DX_IF_FEATURE([$1], 1, 0)]) +$4 +]) +if DX_TEST_FEATURE([$1]); then + $5 + : +fi +AM_CONDITIONAL(DX_COND_$1, DX_TEST_FEATURE([$1])) +if DX_TEST_FEATURE([$1]); then + $6 + : +else + $7 + : +fi +]) + +## -------------- ## +## Public macros. ## +## -------------- ## + +# DX_XXX_FEATURE(DEFAULT_STATE) +# ----------------------------- +AC_DEFUN([DX_DOXYGEN_FEATURE], [AC_DEFUN([DX_FEATURE_doc], [$1])]) +AC_DEFUN([DX_DOT_FEATURE], [AC_DEFUN([DX_FEATURE_dot], [$1])]) +AC_DEFUN([DX_MAN_FEATURE], [AC_DEFUN([DX_FEATURE_man], [$1])]) +AC_DEFUN([DX_HTML_FEATURE], [AC_DEFUN([DX_FEATURE_html], [$1])]) +AC_DEFUN([DX_CHM_FEATURE], [AC_DEFUN([DX_FEATURE_chm], [$1])]) +AC_DEFUN([DX_CHI_FEATURE], [AC_DEFUN([DX_FEATURE_chi], [$1])]) +AC_DEFUN([DX_RTF_FEATURE], [AC_DEFUN([DX_FEATURE_rtf], [$1])]) +AC_DEFUN([DX_XML_FEATURE], [AC_DEFUN([DX_FEATURE_xml], [$1])]) +AC_DEFUN([DX_XML_FEATURE], [AC_DEFUN([DX_FEATURE_xml], [$1])]) +AC_DEFUN([DX_PDF_FEATURE], [AC_DEFUN([DX_FEATURE_pdf], [$1])]) +AC_DEFUN([DX_PS_FEATURE], [AC_DEFUN([DX_FEATURE_ps], [$1])]) + +# DX_INIT_DOXYGEN(PROJECT, [CONFIG-FILE], [OUTPUT-DOC-DIR]) +# --------------------------------------------------------- +# PROJECT also serves as the base name for the documentation files. +# The default CONFIG-FILE is "Doxyfile" and OUTPUT-DOC-DIR is "doxygen-doc". +AC_DEFUN([DX_INIT_DOXYGEN], [ + +# Files: +AC_SUBST([DX_PROJECT], [$1]) +AC_SUBST([DX_CONFIG], [ifelse([$2], [], Doxyfile, [$2])]) +AC_SUBST([DX_DOCDIR], [ifelse([$3], [], doxygen-doc, [$3])]) + +# Environment variables used inside doxygen.cfg: +DX_ENV_APPEND(SRCDIR, $srcdir) +DX_ENV_APPEND(PROJECT, $DX_PROJECT) +DX_ENV_APPEND(DOCDIR, $DX_DOCDIR) +DX_ENV_APPEND(VERSION, $PACKAGE_VERSION) + +# Doxygen itself: +DX_ARG_ABLE(doc, [generate any doxygen documentation], + [], + [], + [DX_REQUIRE_PROG([DX_DOXYGEN], doxygen) + DX_REQUIRE_PROG([DX_PERL], perl)], + [DX_ENV_APPEND(PERL_PATH, $DX_PERL)]) + +# Dot for graphics: +DX_ARG_ABLE(dot, [generate graphics for doxygen documentation], + [DX_CHECK_DEPEND(doc, 1)], + [DX_CLEAR_DEPEND(doc, 1)], + [DX_REQUIRE_PROG([DX_DOT], dot)], + [DX_ENV_APPEND(HAVE_DOT, YES) + DX_ENV_APPEND(DOT_PATH, [`DX_DIRNAME_EXPR($DX_DOT)`])], + [DX_ENV_APPEND(HAVE_DOT, NO)]) + +# Man pages generation: +DX_ARG_ABLE(man, [generate doxygen manual pages], + [DX_CHECK_DEPEND(doc, 1)], + [DX_CLEAR_DEPEND(doc, 1)], + [], + [DX_ENV_APPEND(GENERATE_MAN, YES)], + [DX_ENV_APPEND(GENERATE_MAN, NO)]) + +# RTF file generation: +DX_ARG_ABLE(rtf, [generate doxygen RTF documentation], + [DX_CHECK_DEPEND(doc, 1)], + [DX_CLEAR_DEPEND(doc, 1)], + [], + [DX_ENV_APPEND(GENERATE_RTF, YES)], + [DX_ENV_APPEND(GENERATE_RTF, NO)]) + +# XML file generation: +DX_ARG_ABLE(xml, [generate doxygen XML documentation], + [DX_CHECK_DEPEND(doc, 1)], + [DX_CLEAR_DEPEND(doc, 1)], + [], + [DX_ENV_APPEND(GENERATE_XML, YES)], + [DX_ENV_APPEND(GENERATE_XML, NO)]) + +# (Compressed) HTML help generation: +DX_ARG_ABLE(chm, [generate doxygen compressed HTML help documentation], + [DX_CHECK_DEPEND(doc, 1)], + [DX_CLEAR_DEPEND(doc, 1)], + [DX_REQUIRE_PROG([DX_HHC], hhc)], + [DX_ENV_APPEND(HHC_PATH, $DX_HHC) + DX_ENV_APPEND(GENERATE_HTML, YES) + DX_ENV_APPEND(GENERATE_HTMLHELP, YES)], + [DX_ENV_APPEND(GENERATE_HTMLHELP, NO)]) + +# Seperate CHI file generation. +DX_ARG_ABLE(chi, [generate doxygen seperate compressed HTML help index file], + [DX_CHECK_DEPEND(chm, 1)], + [DX_CLEAR_DEPEND(chm, 1)], + [], + [DX_ENV_APPEND(GENERATE_CHI, YES)], + [DX_ENV_APPEND(GENERATE_CHI, NO)]) + +# Plain HTML pages generation: +DX_ARG_ABLE(html, [generate doxygen plain HTML documentation], + [DX_CHECK_DEPEND(doc, 1) DX_CHECK_DEPEND(chm, 0)], + [DX_CLEAR_DEPEND(doc, 1) DX_CLEAR_DEPEND(chm, 0)], + [], + [DX_ENV_APPEND(GENERATE_HTML, YES)], + [DX_TEST_FEATURE(chm) || DX_ENV_APPEND(GENERATE_HTML, NO)]) + +# PostScript file generation: +DX_ARG_ABLE(ps, [generate doxygen PostScript documentation], + [DX_CHECK_DEPEND(doc, 1)], + [DX_CLEAR_DEPEND(doc, 1)], + [DX_REQUIRE_PROG([DX_LATEX], latex) + DX_REQUIRE_PROG([DX_MAKEINDEX], makeindex) + DX_REQUIRE_PROG([DX_DVIPS], dvips) + DX_REQUIRE_PROG([DX_EGREP], egrep)]) + +# PDF file generation: +DX_ARG_ABLE(pdf, [generate doxygen PDF documentation], + [DX_CHECK_DEPEND(doc, 1)], + [DX_CLEAR_DEPEND(doc, 1)], + [DX_REQUIRE_PROG([DX_PDFLATEX], pdflatex) + DX_REQUIRE_PROG([DX_MAKEINDEX], makeindex) + DX_REQUIRE_PROG([DX_EGREP], egrep)]) + +# LaTeX generation for PS and/or PDF: +AM_CONDITIONAL(DX_COND_latex, DX_TEST_FEATURE(ps) || DX_TEST_FEATURE(pdf)) +if DX_TEST_FEATURE(ps) || DX_TEST_FEATURE(pdf); then + DX_ENV_APPEND(GENERATE_LATEX, YES) +else + DX_ENV_APPEND(GENERATE_LATEX, NO) +fi + +# Paper size for PS and/or PDF: +AC_ARG_VAR(DOXYGEN_PAPER_SIZE, + [a4wide (default), a4, letter, legal or executive]) +case "$DOXYGEN_PAPER_SIZE" in +#( +"") + AC_SUBST(DOXYGEN_PAPER_SIZE, "") +;; #( +a4wide|a4|letter|legal|executive) + DX_ENV_APPEND(PAPER_SIZE, $DOXYGEN_PAPER_SIZE) +;; #( +*) + AC_MSG_ERROR([unknown DOXYGEN_PAPER_SIZE='$DOXYGEN_PAPER_SIZE']) +;; +esac + +#For debugging: +#echo DX_FLAG_doc=$DX_FLAG_doc +#echo DX_FLAG_dot=$DX_FLAG_dot +#echo DX_FLAG_man=$DX_FLAG_man +#echo DX_FLAG_html=$DX_FLAG_html +#echo DX_FLAG_chm=$DX_FLAG_chm +#echo DX_FLAG_chi=$DX_FLAG_chi +#echo DX_FLAG_rtf=$DX_FLAG_rtf +#echo DX_FLAG_xml=$DX_FLAG_xml +#echo DX_FLAG_pdf=$DX_FLAG_pdf +#echo DX_FLAG_ps=$DX_FLAG_ps +#echo DX_ENV=$DX_ENV +]) diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt index 597f620..7581ae5 100644 --- a/src/CMakeLists.txt +++ b/src/CMakeLists.txt @@ -1356,3 +1356,35 @@ if (NOT WIN32) COMPONENT libraries ) endif () + +#----------------------------------------------------------------------------- +# Option to build documentation +#----------------------------------------------------------------------------- +if (DOXYGEN_FOUND) + set (DOXYGEN_PACKAGE ${HDF5_PACKAGE}) + set (DOXYGEN_VERSION_STRING ${HDF5_VERSION_STRING}) + set (DOXYGEN_INCLUDE_ALIASES ${HDF5_DOXYGEN_DIR}/aliases) + set (DOXYGEN_PROJECT_LOGO ${HDF5_DOXYGEN_DIR}/img/HDFG-logo.png) + set (DOXYGEN_PROJECT_BRIEF "HDF5 (Hierarchical Data Format 5) Software Library and Utilities") + set (DOXYGEN_INPUT_DIRECTORY ${HDF5_SRC_DIR} ${HDF5_DOXYGEN_DIR}/dox ${HDF5_GENERATED_SOURCE_DIR}/shared) + set (DOXYGEN_OPTIMIZE_OUTPUT_FOR_C YES) + set (DOXYGEN_MACRO_EXPANSION YES) + set (DOXYGEN_OUTPUT_DIRECTORY ${HDF5_BINARY_DIR}/hdf5lib_docs) + + # Replace variables inside @@ with the current values + configure_file(${HDF5_DOXYGEN_DIR}/Doxyfile.in Doxyfile @ONLY) + + doxygen_add_docs(hdf5lib_doc +# ${common_SRCS} ${shared_gen_SRCS} ${H5_PUBLIC_HEADERS} ${H5_PRIVATE_HEADERS} ${H5_GENERATED_HEADERS} ${HDF5_DOXYGEN_DIR}/dox + ${DOXYGEN_INPUT_DIRECTORY} + ALL + WORKING_DIRECTORY ${HDF5_SRC_DIR} + COMMENT "Generating HDF5 library Source Documentation" + ) + install( + DIRECTORY ${HDF5_BINARY_DIR}/hdf5lib_docs/html + DESTINATION ${HDF5_INSTALL_DATA_DIR} + COMPONENT Documents + ) + +endif () diff --git a/src/Makefile.am b/src/Makefile.am index a333220..8645e9d 100644 --- a/src/Makefile.am +++ b/src/Makefile.am @@ -18,7 +18,7 @@ include $(top_srcdir)/config/commence.am include $(top_srcdir)/config/lt_vers.am - +include $(top_srcdir)/config/doxygen.am # How to build H5detect for number format detection. # Use -g to force no optimization since many compilers (e.g., Intel) takes @@ -33,7 +33,7 @@ lib_LTLIBRARIES=libhdf5.la libhdf5_la_LDFLAGS= -version-info $(LT_VERS_INTERFACE):$(LT_VERS_REVISION):$(LT_VERS_AGE) $(AM_LDFLAGS) # H5Tinit.c and H5lib_settings.c are generated files and should be cleaned. -MOSTLYCLEANFILES=H5Tinit.c H5lib_settings.c +MOSTLYCLEANFILES=H5Tinit.c H5lib_settings.c $(DX_CLEANFILES) # H5pubconf.h is generated by configure, and should be cleaned. DISTCLEANFILES=H5pubconf.h @@ -201,6 +201,15 @@ $(top_srcdir)/src/H5version.h: $(top_srcdir)/src/H5vers.txt $(top_srcdir)/src/H5overflow.h: $(top_srcdir)/src/H5overflow.txt perl $(top_srcdir)/bin/make_overflow $? +# doxygen support +doxygen: + rm -fr $(top_builddir)/hdf5lib_docs + env $(DX_ENV) \ + PROJECT_NAME="HDF5" \ + SRCDIR=$(top_srcdir) \ + OUTPUTDIR=$(top_builddir)/hdf5lib_docs \ + $(DX_DOXYGEN) $(top_builddir)/$(DX_CONFIG) + # Add TRACE macros to library source files. This is done via the trace script # in the hdf5/bin directory. If the file contains HDF5 API macros, a "clean" # version of the source file is saved with a tilde (~) after its name and |
