summaryrefslogtreecommitdiffstats
diff options
context:
space:
mode:
Diffstat
-rw-r--r--CMakeLists.txt6
-rw-r--r--config/cmake/H5pubconf.h.in2
-rw-r--r--config/cmake/scripts/HDF5config.cmake7
-rw-r--r--examples/h5_cmprss.c2
-rw-r--r--src/H5Dchunk.c114
-rw-r--r--src/H5Dvirtual.c204
-rw-r--r--src/H5Fint.c24
-rw-r--r--src/H5Fpkg.h1
-rw-r--r--src/H5Fprivate.h3
-rw-r--r--src/H5Fquery.c21
-rw-r--r--src/H5MF.c4
-rw-r--r--test/dsets.c3
-rw-r--r--test/swmr.c90
-rw-r--r--tools/libtest/h5tools_test_utils.c4
-rw-r--r--tools/test/h5repack/h5repack.sh.in20
-rw-r--r--tools/test/misc/testfiles/h5mkgrp_version.txt.in2
16 files changed, 338 insertions, 169 deletions
diff --git a/CMakeLists.txt b/CMakeLists.txt
index ac291fa..e4b87a4 100644
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
@@ -236,7 +236,7 @@ string (REGEX REPLACE ".*#define[ \t]+H5_VERS_MINOR[ \t]+([0-9]*).*$"
"\\1" H5_VERS_MINOR ${_h5public_h_contents})
string (REGEX REPLACE ".*#define[ \t]+H5_VERS_RELEASE[ \t]+([0-9]*).*$"
"\\1" H5_VERS_RELEASE ${_h5public_h_contents})
-string (REGEX REPLACE ".*#define[ \t]+H5_VERS_SUBRELEASE[ \t]+\"([0-9A-Za-z._]*)\".*$"
+string (REGEX REPLACE ".*#define[ \t]+H5_VERS_SUBRELEASE[ \t]+\"([0-9A-Za-z._\-]*)\".*$"
"\\1" H5_VERS_SUBRELEASE ${_h5public_h_contents})
#message (STATUS "VERSION: ${H5_VERS_MAJOR}.${H5_VERS_MINOR}.${H5_VERS_RELEASE}-${H5_VERS_SUBRELEASE}")
@@ -339,9 +339,11 @@ set (HDF5_PACKAGE_VERSION "${H5_VERS_MAJOR}.${H5_VERS_MINOR}.${H5_VERS_RELEASE}"
set (HDF5_PACKAGE_VERSION_MAJOR "${H5_VERS_MAJOR}.${H5_VERS_MINOR}")
set (HDF5_PACKAGE_VERSION_MINOR "${H5_VERS_RELEASE}")
if (H5_VERS_SUBRELEASE)
- set (HDF5_PACKAGE_VERSION_STRING "${HDF5_PACKAGE_VERSION}-${H5_VERS_SUBRELEASE}")
+ set (HDF5_PACKAGE_VERSION_STRING "${HDF5_PACKAGE_VERSION}.${H5_VERS_SUBRELEASE}")
+ set (HDF5_RELEASE_VERSION_STRING "${HDF5_PACKAGE_VERSION}-${H5_VERS_SUBRELEASE}")
else ()
set (HDF5_PACKAGE_VERSION_STRING "${HDF5_PACKAGE_VERSION}")
+ set (HDF5_RELEASE_VERSION_STRING "${HDF5_PACKAGE_VERSION}")
endif ()
set (HDF5_LIB_PACKAGE_SOVERSION "${H5_LIB_SOVERS_MAJOR}.${H5_LIB_SOVERS_RELEASE}.${H5_LIB_SOVERS_MINOR}")
set (HDF5_LIB_PACKAGE_SOVERSION_MAJOR "${H5_LIB_SOVERS_MAJOR}")
diff --git a/config/cmake/H5pubconf.h.in b/config/cmake/H5pubconf.h.in
index fdf4c7d..600b046 100644
--- a/config/cmake/H5pubconf.h.in
+++ b/config/cmake/H5pubconf.h.in
@@ -733,7 +733,7 @@
#cmakedefine H5_USE_114_API_DEFAULT @H5_USE_114_API_DEFAULT@
/* Define if the library will use file locking */
-#cmakedefine H5_FILE_LOCKING @H5_USE_FILE_LOCKING@
+#cmakedefine H5_USE_FILE_LOCKING @H5_USE_FILE_LOCKING@
/* Define if a memory checking tool will be used on the library, to cause
library to be very picky about memory operations and also disable the
diff --git a/config/cmake/scripts/HDF5config.cmake b/config/cmake/scripts/HDF5config.cmake
index 7b7560f..3a8d5b7 100644
--- a/config/cmake/scripts/HDF5config.cmake
+++ b/config/cmake/scripts/HDF5config.cmake
@@ -21,6 +21,7 @@ cmake_minimum_required (VERSION 3.12)
# ctest -S HDF5config.cmake,OPTION=VALUE -C Release -VV -O test.log
# where valid options for OPTION are:
# BUILD_GENERATOR - The cmake build generator:
+# MinGW * MinGW Makefiles
# Unix * Unix Makefiles
# VS2019 * Visual Studio 16 2019
# VS201964 * Visual Studio 16 2019
@@ -167,7 +168,11 @@ if (NOT DEFINED HPC)
## Set the following to unique id your computer ##
set (CTEST_SITE "WIN7${BUILD_GENERATOR}.XXXX")
else ()
- set (CTEST_CMAKE_GENERATOR "Unix Makefiles")
+ if (MINGW)
+ set (CTEST_CMAKE_GENERATOR "MinGW Makefiles")
+ else ()
+ set (CTEST_CMAKE_GENERATOR "Unix Makefiles")
+ endif ()
## Set the following to unique id your computer ##
if (APPLE)
set (CTEST_SITE "MAC.XXXX")
diff --git a/examples/h5_cmprss.c b/examples/h5_cmprss.c
index 5feadd3..97f6567 100644
--- a/examples/h5_cmprss.c
+++ b/examples/h5_cmprss.c
@@ -98,7 +98,7 @@ int main () {
for (i=0; i<numfilt; i++) {
nelmts = 0;
- filter_type = H5Pget_filter2 (plist_id, 0, &flags, &nelmts, NULL, 0, NULL,
+ filter_type = H5Pget_filter2 (plist_id, i, &flags, &nelmts, NULL, 0, NULL,
&filter_info);
printf ("Filter Type: ");
switch (filter_type) {
diff --git a/src/H5Dchunk.c b/src/H5Dchunk.c
index 8962348..b2a9eb6 100644
--- a/src/H5Dchunk.c
+++ b/src/H5Dchunk.c
@@ -4954,7 +4954,7 @@ H5D__chunk_collective_fill(const H5D_t *dset, H5D_chunk_coll_info_t *chunk_info,
int blocks, leftover, block_len; /* converted to int for MPI */
MPI_Aint *chunk_disp_array = NULL;
int *block_lens = NULL;
- MPI_Datatype mem_type, file_type;
+ MPI_Datatype mem_type = MPI_BYTE, file_type = MPI_BYTE;
H5FD_mpio_xfer_t prev_xfer_mode; /* Previous data xfer mode */
hbool_t have_xfer_mode = FALSE; /* Whether the previous xffer mode has been retrieved */
hbool_t need_addr_sort = FALSE;
@@ -4980,9 +4980,9 @@ H5D__chunk_collective_fill(const H5D_t *dset, H5D_chunk_coll_info_t *chunk_info,
HGOTO_ERROR(H5E_DATASET, H5E_BADVALUE, FAIL, "Resulted in division by zero")
num_blocks = (size_t)(chunk_info->num_io / (size_t)mpi_size); /* value should be the same on all procs */
- /* after evenly distributing the blocks between processes, are
- there any leftover blocks for each individual process
- (round-robin) */
+ /* After evenly distributing the blocks between processes, are there any
+ * leftover blocks for each individual process (round-robin)?
+ */
leftover_blocks = (size_t)(chunk_info->num_io % (size_t)mpi_size);
/* Cast values to types needed by MPI */
@@ -4990,58 +4990,62 @@ H5D__chunk_collective_fill(const H5D_t *dset, H5D_chunk_coll_info_t *chunk_info,
H5_CHECKED_ASSIGN(leftover, int, leftover_blocks, size_t);
H5_CHECKED_ASSIGN(block_len, int, chunk_size, size_t);
- /* Allocate buffers */
- /* (MSC - should not need block_lens if MPI_type_create_hindexed_block is working) */
- if(NULL == (block_lens = (int *)H5MM_malloc((size_t)(blocks + 1) * sizeof(int))))
- HGOTO_ERROR(H5E_DATASET, H5E_CANTALLOC, FAIL, "couldn't allocate chunk lengths buffer")
- if(NULL == (chunk_disp_array = (MPI_Aint *)H5MM_malloc((size_t)(blocks + 1) * sizeof(MPI_Aint))))
- HGOTO_ERROR(H5E_DATASET, H5E_CANTALLOC, FAIL, "couldn't allocate chunk file displacement buffer")
+ /* Check if we have any chunks to write on this rank */
+ if(num_blocks > 0 || (leftover && leftover > mpi_rank)) {
+ /* Allocate buffers */
+ /* (MSC - should not need block_lens if MPI_type_create_hindexed_block is working) */
+ if(NULL == (block_lens = (int *)H5MM_malloc((size_t)(blocks + 1) * sizeof(int))))
+ HGOTO_ERROR(H5E_DATASET, H5E_CANTALLOC, FAIL, "couldn't allocate chunk lengths buffer")
+ if(NULL == (chunk_disp_array = (MPI_Aint *)H5MM_malloc((size_t)(blocks + 1) * sizeof(MPI_Aint))))
+ HGOTO_ERROR(H5E_DATASET, H5E_CANTALLOC, FAIL, "couldn't allocate chunk file displacement buffer")
- for(i = 0 ; i < blocks ; i++) {
- /* store the chunk address as an MPI_Aint */
- chunk_disp_array[i] = (MPI_Aint)(chunk_info->addr[i + mpi_rank*blocks]);
+ for(i = 0 ; i < blocks ; i++) {
+ /* store the chunk address as an MPI_Aint */
+ chunk_disp_array[i] = (MPI_Aint)(chunk_info->addr[i + (mpi_rank * blocks)]);
- /* MSC - should not need this if MPI_type_create_hindexed_block is working */
- block_lens[i] = block_len;
+ /* MSC - should not need this if MPI_type_create_hindexed_block is working */
+ block_lens[i] = block_len;
- /* make sure that the addresses in the datatype are
- monotonically non decreasing */
- if(i && (chunk_disp_array[i] < chunk_disp_array[i - 1]))
- need_addr_sort = TRUE;
- } /* end for */
+ /* Make sure that the addresses in the datatype are
+ * monotonically non-decreasing
+ */
+ if(i && (chunk_disp_array[i] < chunk_disp_array[i - 1]))
+ need_addr_sort = TRUE;
+ } /* end for */
- /* calculate if there are any leftover blocks after evenly
- distributing. If there are, then round robin the distribution
- to processes 0 -> leftover. */
- if(leftover && leftover > mpi_rank) {
- chunk_disp_array[blocks] = (MPI_Aint)chunk_info->addr[blocks*mpi_size + mpi_rank];
- if(blocks && (chunk_disp_array[blocks] < chunk_disp_array[blocks - 1]))
- need_addr_sort = TRUE;
- block_lens[blocks] = block_len;
- blocks++;
- }
+ /* Calculate if there are any leftover blocks after evenly
+ * distributing. If there are, then round-robin the distribution
+ * to processes 0 -> leftover.
+ */
+ if(leftover && leftover > mpi_rank) {
+ chunk_disp_array[blocks] = (MPI_Aint)chunk_info->addr[(blocks * mpi_size) + mpi_rank];
+ if(blocks && (chunk_disp_array[blocks] < chunk_disp_array[blocks - 1]))
+ need_addr_sort = TRUE;
+ block_lens[blocks] = block_len;
+ blocks++;
+ }
- /*
- * Ensure that the blocks are sorted in monotonically non-decreasing
- * order of offset in the file.
- */
- if(need_addr_sort)
- HDqsort(chunk_disp_array, blocks, sizeof(MPI_Aint), H5D__chunk_cmp_addr);
+ /* Ensure that the blocks are sorted in monotonically non-decreasing
+ * order of offset in the file.
+ */
+ if(need_addr_sort)
+ HDqsort(chunk_disp_array, blocks, sizeof(MPI_Aint), H5D__chunk_cmp_addr);
- /* MSC - should use this if MPI_type_create_hindexed block is working:
- * mpi_code = MPI_Type_create_hindexed_block(blocks, block_len, chunk_disp_array, MPI_BYTE, &file_type);
- */
- mpi_code = MPI_Type_create_hindexed(blocks, block_lens, chunk_disp_array, MPI_BYTE, &file_type);
- if(mpi_code != MPI_SUCCESS)
- HMPI_GOTO_ERROR(FAIL, "MPI_Type_create_hindexed failed", mpi_code)
- if(MPI_SUCCESS != (mpi_code = MPI_Type_commit(&file_type)))
- HMPI_GOTO_ERROR(FAIL, "MPI_Type_commit failed", mpi_code)
-
- mpi_code = MPI_Type_create_hvector(blocks, block_len, 0, MPI_BYTE, &mem_type);
- if(mpi_code != MPI_SUCCESS)
- HMPI_GOTO_ERROR(FAIL, "MPI_Type_create_hvector failed", mpi_code)
- if(MPI_SUCCESS != (mpi_code = MPI_Type_commit(&mem_type)))
- HMPI_GOTO_ERROR(FAIL, "MPI_Type_commit failed", mpi_code)
+ /* MSC - should use this if MPI_type_create_hindexed block is working:
+ * mpi_code = MPI_Type_create_hindexed_block(blocks, block_len, chunk_disp_array, MPI_BYTE, &file_type);
+ */
+ mpi_code = MPI_Type_create_hindexed(blocks, block_lens, chunk_disp_array, MPI_BYTE, &file_type);
+ if(mpi_code != MPI_SUCCESS)
+ HMPI_GOTO_ERROR(FAIL, "MPI_Type_create_hindexed failed", mpi_code)
+ if(MPI_SUCCESS != (mpi_code = MPI_Type_commit(&file_type)))
+ HMPI_GOTO_ERROR(FAIL, "MPI_Type_commit failed", mpi_code)
+
+ mpi_code = MPI_Type_create_hvector(blocks, block_len, 0, MPI_BYTE, &mem_type);
+ if(mpi_code != MPI_SUCCESS)
+ HMPI_GOTO_ERROR(FAIL, "MPI_Type_create_hvector failed", mpi_code)
+ if(MPI_SUCCESS != (mpi_code = MPI_Type_commit(&mem_type)))
+ HMPI_GOTO_ERROR(FAIL, "MPI_Type_commit failed", mpi_code)
+ } /* end if */
/* Set MPI-IO VFD properties */
@@ -5073,10 +5077,12 @@ done:
HDONE_ERROR(H5E_DATASET, H5E_CANTSET, FAIL, "can't set transfer mode")
/* free things */
- if(MPI_SUCCESS != (mpi_code = MPI_Type_free(&file_type)))
- HMPI_DONE_ERROR(FAIL, "MPI_Type_free failed", mpi_code)
- if(MPI_SUCCESS != (mpi_code = MPI_Type_free(&mem_type)))
- HMPI_DONE_ERROR(FAIL, "MPI_Type_free failed", mpi_code)
+ if(MPI_BYTE != file_type)
+ if(MPI_SUCCESS != (mpi_code = MPI_Type_free(&file_type)))
+ HMPI_DONE_ERROR(FAIL, "MPI_Type_free failed", mpi_code)
+ if(MPI_BYTE != mem_type)
+ if(MPI_SUCCESS != (mpi_code = MPI_Type_free(&mem_type)))
+ HMPI_DONE_ERROR(FAIL, "MPI_Type_free failed", mpi_code)
H5MM_xfree(chunk_disp_array);
H5MM_xfree(block_lens);
diff --git a/src/H5Dvirtual.c b/src/H5Dvirtual.c
index 799ee2b..e997a33 100644
--- a/src/H5Dvirtual.c
+++ b/src/H5Dvirtual.c
@@ -313,6 +313,8 @@ done:
herr_t
H5D_virtual_update_min_dims(H5O_layout_t *layout, size_t idx)
{
+ H5O_storage_virtual_t *virt = &layout->storage.u.virt;
+ H5O_storage_virtual_ent_t *ent = &virt->list[idx];
H5S_sel_type sel_type;
int rank;
hsize_t bounds_start[H5S_MAX_RANK];
@@ -324,10 +326,10 @@ H5D_virtual_update_min_dims(H5O_layout_t *layout, size_t idx)
HDassert(layout);
HDassert(layout->type == H5D_VIRTUAL);
- HDassert(idx < layout->storage.u.virt.list_nalloc);
+ HDassert(idx < virt->list_nalloc);
/* Get type of selection */
- if(H5S_SEL_ERROR == (sel_type = H5S_GET_SELECT_TYPE(layout->storage.u.virt.list[idx].source_dset.virtual_select)))
+ if(H5S_SEL_ERROR == (sel_type = H5S_GET_SELECT_TYPE(ent->source_dset.virtual_select)))
HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "unable to get selection type")
/* Do not update min_dims for "all" or "none" selections */
@@ -335,19 +337,19 @@ H5D_virtual_update_min_dims(H5O_layout_t *layout, size_t idx)
HGOTO_DONE(SUCCEED)
/* Get rank of vspace */
- if((rank = H5S_GET_EXTENT_NDIMS(layout->storage.u.virt.list[idx].source_dset.virtual_select)) < 0)
+ if((rank = H5S_GET_EXTENT_NDIMS(ent->source_dset.virtual_select)) < 0)
HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "unable to get number of dimensions")
/* Get selection bounds */
- if(H5S_SELECT_BOUNDS(layout->storage.u.virt.list[idx].source_dset.virtual_select, bounds_start, bounds_end) < 0)
+ if(H5S_SELECT_BOUNDS(ent->source_dset.virtual_select, bounds_start, bounds_end) < 0)
HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "unable to get selection bounds")
/* Update min_dims */
for(i = 0; i < rank; i++)
/* Don't check unlimited dimensions in the selection */
- if((i != layout->storage.u.virt.list[idx].unlim_dim_virtual)
- && (bounds_end[i] >= layout->storage.u.virt.min_dims[i]))
- layout->storage.u.virt.min_dims[i] = bounds_end[i] + (hsize_t)1;
+ if((i != ent->unlim_dim_virtual)
+ && (bounds_end[i] >= virt->min_dims[i]))
+ virt->min_dims[i] = bounds_end[i] + (hsize_t)1;
done:
FUNC_LEAVE_NOAPI(ret_value)
@@ -419,6 +421,7 @@ done:
herr_t
H5D__virtual_store_layout(H5F_t *f, H5O_layout_t *layout)
{
+ H5O_storage_virtual_t *virt = &layout->storage.u.virt;
uint8_t *heap_block = NULL; /* Block to add to heap */
size_t *str_size = NULL; /* Array for VDS entry string lengths */
uint8_t *heap_block_p; /* Pointer into the heap block, while encoding */
@@ -433,16 +436,16 @@ H5D__virtual_store_layout(H5F_t *f, H5O_layout_t *layout)
/* Sanity checking */
HDassert(f);
HDassert(layout);
- HDassert(layout->storage.u.virt.serial_list_hobjid.addr == HADDR_UNDEF);
+ HDassert(virt->serial_list_hobjid.addr == HADDR_UNDEF);
/* Create block if # of used entries > 0 */
- if(layout->storage.u.virt.list_nused > 0) {
+ if(virt->list_nused > 0) {
/* Set the low/high bounds according to 'f' for the API context */
H5CX_set_libver_bounds(f);
/* Allocate array for caching results of strlen */
- if(NULL == (str_size = (size_t *)H5MM_malloc(2 * layout->storage.u.virt.list_nused * sizeof(size_t))))
+ if(NULL == (str_size = (size_t *)H5MM_malloc(2 * virt->list_nused * sizeof(size_t))))
HGOTO_ERROR(H5E_OHDR, H5E_RESOURCE, FAIL, "unable to allocate string length array")
/*
@@ -453,29 +456,30 @@ H5D__virtual_store_layout(H5F_t *f, H5O_layout_t *layout)
block_size = (size_t)1 + H5F_SIZEOF_SIZE(f);
/* Calculate size of each entry */
- for(i = 0; i < layout->storage.u.virt.list_nused; i++) {
+ for(i = 0; i < virt->list_nused; i++) {
+ H5O_storage_virtual_ent_t *ent = &virt->list[i];
hssize_t select_serial_size; /* Size of serialized selection */
- HDassert(layout->storage.u.virt.list[i].source_file_name);
- HDassert(layout->storage.u.virt.list[i].source_dset_name);
- HDassert(layout->storage.u.virt.list[i].source_select);
- HDassert(layout->storage.u.virt.list[i].source_dset.virtual_select);
+ HDassert(ent->source_file_name);
+ HDassert(ent->source_dset_name);
+ HDassert(ent->source_select);
+ HDassert(ent->source_dset.virtual_select);
/* Source file name */
- str_size[2 * i] = HDstrlen(layout->storage.u.virt.list[i].source_file_name) + (size_t)1;
+ str_size[2 * i] = HDstrlen(ent->source_file_name) + (size_t)1;
block_size += str_size[2 * i];
/* Source dset name */
- str_size[(2 * i) + 1] = HDstrlen(layout->storage.u.virt.list[i].source_dset_name) + (size_t)1;
+ str_size[(2 * i) + 1] = HDstrlen(ent->source_dset_name) + (size_t)1;
block_size += str_size[(2 * i) + 1];
/* Source selection */
- if((select_serial_size = H5S_SELECT_SERIAL_SIZE(layout->storage.u.virt.list[i].source_select)) < 0)
+ if((select_serial_size = H5S_SELECT_SERIAL_SIZE(ent->source_select)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTENCODE, FAIL, "unable to check dataspace selection size")
block_size += (size_t)select_serial_size;
/* Virtual dataset selection */
- if((select_serial_size = H5S_SELECT_SERIAL_SIZE(layout->storage.u.virt.list[i].source_dset.virtual_select)) < 0)
+ if((select_serial_size = H5S_SELECT_SERIAL_SIZE(ent->source_dset.virtual_select)) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTENCODE, FAIL, "unable to check dataspace selection size")
block_size += (size_t)select_serial_size;
} /* end for */
@@ -498,25 +502,26 @@ H5D__virtual_store_layout(H5F_t *f, H5O_layout_t *layout)
*heap_block_p++ = (uint8_t)H5O_LAYOUT_VDS_GH_ENC_VERS;
/* Number of entries */
- tmp_nentries = (hsize_t)layout->storage.u.virt.list_nused;
+ tmp_nentries = (hsize_t)virt->list_nused;
H5F_ENCODE_LENGTH(f, heap_block_p, tmp_nentries)
/* Encode each entry */
- for(i = 0; i < layout->storage.u.virt.list_nused; i++) {
+ for(i = 0; i < virt->list_nused; i++) {
+ H5O_storage_virtual_ent_t *ent = &virt->list[i];
/* Source file name */
- H5MM_memcpy((char *)heap_block_p, layout->storage.u.virt.list[i].source_file_name, str_size[2 * i]);
+ H5MM_memcpy((char *)heap_block_p, ent->source_file_name, str_size[2 * i]);
heap_block_p += str_size[2 * i];
/* Source dataset name */
- H5MM_memcpy((char *)heap_block_p, layout->storage.u.virt.list[i].source_dset_name, str_size[(2 * i) + 1]);
+ H5MM_memcpy((char *)heap_block_p, ent->source_dset_name, str_size[(2 * i) + 1]);
heap_block_p += str_size[(2 * i) + 1];
/* Source selection */
- if(H5S_SELECT_SERIALIZE(layout->storage.u.virt.list[i].source_select, &heap_block_p) < 0)
+ if(H5S_SELECT_SERIALIZE(ent->source_select, &heap_block_p) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTCOPY, FAIL, "unable to serialize source selection")
/* Virtual selection */
- if(H5S_SELECT_SERIALIZE(layout->storage.u.virt.list[i].source_dset.virtual_select, &heap_block_p) < 0)
+ if(H5S_SELECT_SERIALIZE(ent->source_dset.virtual_select, &heap_block_p) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTCOPY, FAIL, "unable to serialize virtual selection")
} /* end for */
@@ -525,7 +530,7 @@ H5D__virtual_store_layout(H5F_t *f, H5O_layout_t *layout)
UINT32ENCODE(heap_block_p, chksum)
/* Insert block into global heap */
- if(H5HG_insert(f, block_size, heap_block, &(layout->storage.u.virt.serial_list_hobjid)) < 0) /* Casting away const OK --NAF */
+ if(H5HG_insert(f, block_size, heap_block, &(virt->serial_list_hobjid)) < 0) /* Casting away const OK --NAF */
HGOTO_ERROR(H5E_OHDR, H5E_CANTINSERT, FAIL, "unable to insert virtual dataset heap block")
} /* end if */
@@ -556,6 +561,7 @@ herr_t
H5D__virtual_copy_layout(H5O_layout_t *layout)
{
H5O_storage_virtual_ent_t *orig_list = NULL;
+ H5O_storage_virtual_t *virt = &layout->storage.u.virt;
hid_t orig_source_fapl;
hid_t orig_source_dapl;
H5P_genplist_t *plist;
@@ -569,127 +575,129 @@ H5D__virtual_copy_layout(H5O_layout_t *layout)
/* Save original entry list and top-level property lists and reset in layout
* so the originals aren't closed on error */
- orig_source_fapl = layout->storage.u.virt.source_fapl;
- layout->storage.u.virt.source_fapl = -1;
- orig_source_dapl = layout->storage.u.virt.source_dapl;
- layout->storage.u.virt.source_dapl = -1;
- orig_list = layout->storage.u.virt.list;
- layout->storage.u.virt.list = NULL;
+ orig_source_fapl = virt->source_fapl;
+ virt->source_fapl = -1;
+ orig_source_dapl = virt->source_dapl;
+ virt->source_dapl = -1;
+ orig_list = virt->list;
+ virt->list = NULL;
/* Copy entry list */
- if(layout->storage.u.virt.list_nused > 0) {
+ if(virt->list_nused > 0) {
HDassert(orig_list);
/* Allocate memory for the list */
- if(NULL == (layout->storage.u.virt.list = (H5O_storage_virtual_ent_t *)H5MM_calloc(layout->storage.u.virt.list_nused * sizeof(H5O_storage_virtual_ent_t))))
+ if(NULL == (virt->list = H5MM_calloc(virt->list_nused * sizeof(virt->list[0]))))
HGOTO_ERROR(H5E_DATASET, H5E_CANTALLOC, FAIL, "unable to allocate memory for virtual dataset entry list")
- layout->storage.u.virt.list_nalloc = layout->storage.u.virt.list_nused;
+ virt->list_nalloc = virt->list_nused;
/* Copy the list entries, though set source_dset.dset and sub_dset to
* NULL */
- for(i = 0; i < layout->storage.u.virt.list_nused; i++) {
+ for(i = 0; i < virt->list_nused; i++) {
+ H5O_storage_virtual_ent_t *ent = &virt->list[i];
+
/* Copy virtual selection */
- if(NULL == (layout->storage.u.virt.list[i].source_dset.virtual_select
+ if(NULL == (ent->source_dset.virtual_select
= H5S_copy(orig_list[i].source_dset.virtual_select, FALSE, TRUE)))
HGOTO_ERROR(H5E_DATASET, H5E_CANTCOPY, FAIL, "unable to copy virtual selection")
/* Copy original source names */
- if(NULL == (layout->storage.u.virt.list[i].source_file_name
+ if(NULL == (ent->source_file_name
= H5MM_strdup(orig_list[i].source_file_name)))
HGOTO_ERROR(H5E_DATASET, H5E_RESOURCE, FAIL, "unable to duplicate source file name")
- if(NULL == (layout->storage.u.virt.list[i].source_dset_name
+ if(NULL == (ent->source_dset_name
= H5MM_strdup(orig_list[i].source_dset_name)))
HGOTO_ERROR(H5E_DATASET, H5E_RESOURCE, FAIL, "unable to duplicate source dataset name")
/* Copy source selection */
- if(NULL == (layout->storage.u.virt.list[i].source_select
+ if(NULL == (ent->source_select
= H5S_copy(orig_list[i].source_select, FALSE, TRUE)))
HGOTO_ERROR(H5E_DATASET, H5E_CANTCOPY, FAIL, "unable to copy source selection")
/* Initialize clipped selections */
if(orig_list[i].unlim_dim_virtual < 0) {
- layout->storage.u.virt.list[i].source_dset.clipped_source_select = layout->storage.u.virt.list[i].source_select;
- layout->storage.u.virt.list[i].source_dset.clipped_virtual_select = layout->storage.u.virt.list[i].source_dset.virtual_select;
+ ent->source_dset.clipped_source_select = ent->source_select;
+ ent->source_dset.clipped_virtual_select = ent->source_dset.virtual_select;
} /* end if */
/* Copy parsed names */
- if(H5D__virtual_copy_parsed_name(&layout->storage.u.virt.list[i].parsed_source_file_name, orig_list[i].parsed_source_file_name) < 0)
+ if(H5D__virtual_copy_parsed_name(&ent->parsed_source_file_name, orig_list[i].parsed_source_file_name) < 0)
HGOTO_ERROR(H5E_DATASET, H5E_CANTCOPY, FAIL, "unable to copy parsed source file name")
- layout->storage.u.virt.list[i].psfn_static_strlen = orig_list[i].psfn_static_strlen;
- layout->storage.u.virt.list[i].psfn_nsubs = orig_list[i].psfn_nsubs;
- if(H5D__virtual_copy_parsed_name(&layout->storage.u.virt.list[i].parsed_source_dset_name, orig_list[i].parsed_source_dset_name) < 0)
+ ent->psfn_static_strlen = orig_list[i].psfn_static_strlen;
+ ent->psfn_nsubs = orig_list[i].psfn_nsubs;
+ if(H5D__virtual_copy_parsed_name(&ent->parsed_source_dset_name, orig_list[i].parsed_source_dset_name) < 0)
HGOTO_ERROR(H5E_DATASET, H5E_CANTCOPY, FAIL, "unable to copy parsed source dataset name")
- layout->storage.u.virt.list[i].psdn_static_strlen = orig_list[i].psdn_static_strlen;
- layout->storage.u.virt.list[i].psdn_nsubs = orig_list[i].psdn_nsubs;
+ ent->psdn_static_strlen = orig_list[i].psdn_static_strlen;
+ ent->psdn_nsubs = orig_list[i].psdn_nsubs;
/* Copy source names in source dset or add reference as appropriate
*/
if(orig_list[i].source_dset.file_name) {
if(orig_list[i].source_dset.file_name
== orig_list[i].source_file_name)
- layout->storage.u.virt.list[i].source_dset.file_name = layout->storage.u.virt.list[i].source_file_name;
+ ent->source_dset.file_name = ent->source_file_name;
else if(orig_list[i].parsed_source_file_name
&& (orig_list[i].source_dset.file_name
!= orig_list[i].parsed_source_file_name->name_segment)) {
- HDassert(layout->storage.u.virt.list[i].parsed_source_file_name);
- HDassert(layout->storage.u.virt.list[i].parsed_source_file_name->name_segment);
- layout->storage.u.virt.list[i].source_dset.file_name = layout->storage.u.virt.list[i].parsed_source_file_name->name_segment;
+ HDassert(ent->parsed_source_file_name);
+ HDassert(ent->parsed_source_file_name->name_segment);
+ ent->source_dset.file_name = ent->parsed_source_file_name->name_segment;
} /* end if */
else
- if(NULL == (layout->storage.u.virt.list[i].source_dset.file_name
+ if(NULL == (ent->source_dset.file_name
= H5MM_strdup(orig_list[i].source_dset.file_name)))
HGOTO_ERROR(H5E_DATASET, H5E_RESOURCE, FAIL, "unable to duplicate source file name")
} /* end if */
if(orig_list[i].source_dset.dset_name) {
if(orig_list[i].source_dset.dset_name
== orig_list[i].source_dset_name)
- layout->storage.u.virt.list[i].source_dset.dset_name = layout->storage.u.virt.list[i].source_dset_name;
+ ent->source_dset.dset_name = ent->source_dset_name;
else if(orig_list[i].parsed_source_dset_name
&& (orig_list[i].source_dset.dset_name
!= orig_list[i].parsed_source_dset_name->name_segment)) {
- HDassert(layout->storage.u.virt.list[i].parsed_source_dset_name);
- HDassert(layout->storage.u.virt.list[i].parsed_source_dset_name->name_segment);
- layout->storage.u.virt.list[i].source_dset.dset_name = layout->storage.u.virt.list[i].parsed_source_dset_name->name_segment;
+ HDassert(ent->parsed_source_dset_name);
+ HDassert(ent->parsed_source_dset_name->name_segment);
+ ent->source_dset.dset_name = ent->parsed_source_dset_name->name_segment;
} /* end if */
else
- if(NULL == (layout->storage.u.virt.list[i].source_dset.dset_name
+ if(NULL == (ent->source_dset.dset_name
= H5MM_strdup(orig_list[i].source_dset.dset_name)))
HGOTO_ERROR(H5E_DATASET, H5E_RESOURCE, FAIL, "unable to duplicate source dataset name")
} /* end if */
/* Copy other fields in entry */
- layout->storage.u.virt.list[i].unlim_dim_source = orig_list[i].unlim_dim_source;
- layout->storage.u.virt.list[i].unlim_dim_virtual = orig_list[i].unlim_dim_virtual;
- layout->storage.u.virt.list[i].unlim_extent_source = orig_list[i].unlim_extent_source;
- layout->storage.u.virt.list[i].unlim_extent_virtual = orig_list[i].unlim_extent_virtual;
- layout->storage.u.virt.list[i].clip_size_source = orig_list[i].clip_size_source;
- layout->storage.u.virt.list[i].clip_size_virtual = orig_list[i].clip_size_virtual;
- layout->storage.u.virt.list[i].source_space_status = orig_list[i].source_space_status;
- layout->storage.u.virt.list[i].virtual_space_status = orig_list[i].virtual_space_status;
+ ent->unlim_dim_source = orig_list[i].unlim_dim_source;
+ ent->unlim_dim_virtual = orig_list[i].unlim_dim_virtual;
+ ent->unlim_extent_source = orig_list[i].unlim_extent_source;
+ ent->unlim_extent_virtual = orig_list[i].unlim_extent_virtual;
+ ent->clip_size_source = orig_list[i].clip_size_source;
+ ent->clip_size_virtual = orig_list[i].clip_size_virtual;
+ ent->source_space_status = orig_list[i].source_space_status;
+ ent->virtual_space_status = orig_list[i].virtual_space_status;
} /* end for */
} /* end if */
else {
/* Zero out other fields related to list, just to be sure */
- layout->storage.u.virt.list = NULL;
- layout->storage.u.virt.list_nalloc = 0;
+ virt->list = NULL;
+ virt->list_nalloc = 0;
} /* end else */
/* Copy property lists */
if(orig_source_fapl >= 0) {
if(NULL == (plist = (H5P_genplist_t *)H5I_object_verify(orig_source_fapl, H5I_GENPROP_LST)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a property list")
- if((layout->storage.u.virt.source_fapl = H5P_copy_plist(plist, FALSE)) < 0)
+ if((virt->source_fapl = H5P_copy_plist(plist, FALSE)) < 0)
HGOTO_ERROR(H5E_DATASET, H5E_CANTCOPY, FAIL, "can't copy fapl")
} /* end if */
if(orig_source_dapl >= 0) {
if(NULL == (plist = (H5P_genplist_t *)H5I_object_verify(orig_source_dapl, H5I_GENPROP_LST)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a property list")
- if((layout->storage.u.virt.source_dapl = H5P_copy_plist(plist, FALSE)) < 0)
+ if((virt->source_dapl = H5P_copy_plist(plist, FALSE)) < 0)
HGOTO_ERROR(H5E_DATASET, H5E_CANTCOPY, FAIL, "can't copy dapl")
} /* end if */
/* New layout is not fully initialized */
- layout->storage.u.virt.init = FALSE;
+ virt->init = FALSE;
done:
/* Release allocated resources on failure */
@@ -721,6 +729,7 @@ herr_t
H5D__virtual_reset_layout(H5O_layout_t *layout)
{
size_t i, j;
+ H5O_storage_virtual_t *virt = &layout->storage.u.virt;
herr_t ret_value = SUCCEED;
FUNC_ENTER_PACKAGE
@@ -731,53 +740,54 @@ H5D__virtual_reset_layout(H5O_layout_t *layout)
/* Free the list entries. Note we always attempt to free everything even in
* the case of a failure. Because of this, and because we free the list
* afterwards, we do not need to zero out the memory in the list. */
- for(i = 0; i < layout->storage.u.virt.list_nused; i++) {
+ for(i = 0; i < virt->list_nused; i++) {
+ H5O_storage_virtual_ent_t *ent = &virt->list[i];
/* Free source_dset */
- if(H5D__virtual_reset_source_dset(&layout->storage.u.virt.list[i], &layout->storage.u.virt.list[i].source_dset) < 0)
+ if(H5D__virtual_reset_source_dset(ent, &ent->source_dset) < 0)
HDONE_ERROR(H5E_DATASET, H5E_CANTFREE, FAIL, "unable to reset source dataset")
/* Free original source names */
- (void)H5MM_xfree(layout->storage.u.virt.list[i].source_file_name);
- (void)H5MM_xfree(layout->storage.u.virt.list[i].source_dset_name);
+ (void)H5MM_xfree(ent->source_file_name);
+ (void)H5MM_xfree(ent->source_dset_name);
/* Free sub_dset */
- for(j = 0; j < layout->storage.u.virt.list[i].sub_dset_nalloc; j++)
- if(H5D__virtual_reset_source_dset(&layout->storage.u.virt.list[i], &layout->storage.u.virt.list[i].sub_dset[j]) < 0)
+ for(j = 0; j < ent->sub_dset_nalloc; j++)
+ if(H5D__virtual_reset_source_dset(ent, &ent->sub_dset[j]) < 0)
HDONE_ERROR(H5E_DATASET, H5E_CANTFREE, FAIL, "unable to reset source dataset")
- layout->storage.u.virt.list[i].sub_dset = (H5O_storage_virtual_srcdset_t *)H5MM_xfree(layout->storage.u.virt.list[i].sub_dset);
+ ent->sub_dset = H5MM_xfree(ent->sub_dset);
/* Free source_select */
- if(layout->storage.u.virt.list[i].source_select)
- if(H5S_close(layout->storage.u.virt.list[i].source_select) < 0)
+ if(ent->source_select)
+ if(H5S_close(ent->source_select) < 0)
HDONE_ERROR(H5E_DATASET, H5E_CLOSEERROR, FAIL, "unable to release source selection")
/* Free parsed_source_file_name */
- H5D_virtual_free_parsed_name(layout->storage.u.virt.list[i].parsed_source_file_name);
+ H5D_virtual_free_parsed_name(ent->parsed_source_file_name);
/* Free parsed_source_dset_name */
- H5D_virtual_free_parsed_name(layout->storage.u.virt.list[i].parsed_source_dset_name);
- } /* end for */
+ H5D_virtual_free_parsed_name(ent->parsed_source_dset_name);
+ }
/* Free the list */
- layout->storage.u.virt.list = (H5O_storage_virtual_ent_t *)H5MM_xfree(layout->storage.u.virt.list);
- layout->storage.u.virt.list_nalloc = (size_t)0;
- layout->storage.u.virt.list_nused = (size_t)0;
- (void)HDmemset(layout->storage.u.virt.min_dims, 0, sizeof(layout->storage.u.virt.min_dims));
+ virt->list = H5MM_xfree(virt->list);
+ virt->list_nalloc = (size_t)0;
+ virt->list_nused = (size_t)0;
+ (void)HDmemset(virt->min_dims, 0, sizeof(virt->min_dims));
/* Close access property lists */
- if(layout->storage.u.virt.source_fapl >= 0) {
- if(H5I_dec_ref(layout->storage.u.virt.source_fapl) < 0)
+ if(virt->source_fapl >= 0) {
+ if(H5I_dec_ref(virt->source_fapl) < 0)
HDONE_ERROR(H5E_DATASET, H5E_CANTFREE, FAIL, "can't close source fapl")
- layout->storage.u.virt.source_fapl = -1;
- } /* end if */
- if(layout->storage.u.virt.source_dapl >= 0) {
- if(H5I_dec_ref(layout->storage.u.virt.source_dapl) < 0)
+ virt->source_fapl = -1;
+ }
+ if(virt->source_dapl >= 0) {
+ if(H5I_dec_ref(virt->source_dapl) < 0)
HDONE_ERROR(H5E_DATASET, H5E_CANTFREE, FAIL, "can't close source dapl")
- layout->storage.u.virt.source_dapl = -1;
- } /* end if */
+ virt->source_dapl = -1;
+ }
/* The list is no longer initialized */
- layout->storage.u.virt.init = FALSE;
+ virt->init = FALSE;
/* Note the lack of a done: label. This is because there are no HGOTO_ERROR
* calls. If one is added, a done: label must also be added */
@@ -2781,7 +2791,7 @@ H5D__virtual_write_one(H5D_io_info_t *io_info, const H5D_type_info_t *type_info,
* extent in the unlimited dimension. -NAF */
/* Project intersection of file space and mapping virtual space onto
* mapping source space */
- if(H5S_select_project_intersection(source_dset->virtual_select, source_dset->clipped_source_select, file_space, &projected_src_space, TRUE) < 0)
+ if(H5S_select_project_intersection(source_dset->clipped_virtual_select, source_dset->clipped_source_select, file_space, &projected_src_space, TRUE) < 0)
HGOTO_ERROR(H5E_DATASET, H5E_CANTCLIP, FAIL, "can't project virtual intersection onto source space")
/* Perform write on source dataset */
diff --git a/src/H5Fint.c b/src/H5Fint.c
index 46508fe..7e3876f 100644
--- a/src/H5Fint.c
+++ b/src/H5Fint.c
@@ -1885,6 +1885,15 @@ H5F_open(const char *name, unsigned flags, hid_t fcpl_id, hid_t fapl_id)
shared = file->shared;
lf = shared->lf;
+ /* Set the file locking flag. If the file is already open, the file
+ * requested file locking flag must match that of the open file.
+ */
+ if(shared->nrefs == 1)
+ file->shared->use_file_locking = use_file_locking;
+ else if(shared->nrefs > 1)
+ if(file->shared->use_file_locking != use_file_locking)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTINIT, NULL, "file locking flag values don't match")
+
/* Check if page buffering is enabled */
if(H5P_get(a_plist, H5F_ACS_PAGE_BUFFER_SIZE_NAME, &page_buf_size) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, NULL, "can't get page buffer size")
@@ -3695,6 +3704,12 @@ H5F__start_swmr_write(H5F_t *f)
setup = TRUE;
+ /* Place an advisory lock on the file */
+ if(H5F_USE_FILE_LOCKING(f))
+ if(H5FD_lock(f->shared->lf, TRUE) < 0) {
+ HGOTO_ERROR(H5E_FILE, H5E_CANTLOCKFILE, FAIL, "unable to lock the file")
+ }
+
/* Mark superblock as dirty */
if(H5F_super_dirty(f) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTMARKDIRTY, FAIL, "unable to mark superblock as dirty")
@@ -3712,10 +3727,6 @@ H5F__start_swmr_write(H5F_t *f)
if(H5O_refresh_metadata_reopen(obj_ids[u], &obj_glocs[u], vol_connector, TRUE) < 0)
HGOTO_ERROR(H5E_ATOM, H5E_CLOSEERROR, FAIL, "can't refresh-close object")
- /* Unlock the file */
- if(H5FD_unlock(f->shared->lf) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTOPENFILE, FAIL, "unable to unlock the file")
-
done:
if(ret_value < 0 && setup) {
@@ -3744,6 +3755,11 @@ done:
HDONE_ERROR(H5E_FILE, H5E_CANTFLUSH, FAIL, "unable to flush superblock")
} /* end if */
+ /* Unlock the file */
+ if(H5F_USE_FILE_LOCKING(f))
+ if(H5FD_unlock(f->shared->lf) < 0)
+ HDONE_ERROR(H5E_FILE, H5E_CANTUNLOCKFILE, FAIL, "unable to unlock the file")
+
/* Free memory */
if(obj_ids)
H5MM_xfree(obj_ids);
diff --git a/src/H5Fpkg.h b/src/H5Fpkg.h
index ff44536..30306d8 100644
--- a/src/H5Fpkg.h
+++ b/src/H5Fpkg.h
@@ -306,6 +306,7 @@ struct H5F_shared_t {
struct H5G_t *root_grp; /* Open root group */
H5FO_t *open_objs; /* Open objects in file */
H5UC_t *grp_btree_shared; /* Ref-counted group B-tree node info */
+ hbool_t use_file_locking; /* Whether or not to use file locking */
hbool_t closing; /* File is in the process of being closed */
/* Cached VOL connector ID & info */
diff --git a/src/H5Fprivate.h b/src/H5Fprivate.h
index 384a781..552855b 100644
--- a/src/H5Fprivate.h
+++ b/src/H5Fprivate.h
@@ -338,6 +338,7 @@ typedef struct H5F_t H5F_t;
#define H5F_SET_MIN_DSET_OHDR(F, V) ((F)->shared->crt_dset_min_ohdr_flag = (V))
#define H5F_VOL_CLS(F) ((F)->shared->vol_cls)
#define H5F_VOL_OBJ(F) ((F)->vol_obj)
+#define H5F_USE_FILE_LOCKING(F) ((F)->shared->use_file_locking)
#else /* H5F_MODULE */
#define H5F_LOW_BOUND(F) (H5F_get_low_bound(F))
#define H5F_HIGH_BOUND(F) (H5F_get_high_bound(F))
@@ -400,6 +401,7 @@ typedef struct H5F_t H5F_t;
#define H5F_SET_MIN_DSET_OHDR(F, V) (H5F_set_min_dset_ohdr((F), (V)))
#define H5F_VOL_CLS(F) (H5F_get_vol_cls(F))
#define H5F_VOL_OBJ(F) (H5F_get_vol_obj(F))
+#define H5F_USE_FILE_LOCKING(F) (H5F_get_use_file_locking(F))
#endif /* H5F_MODULE */
@@ -765,6 +767,7 @@ H5_DLL hbool_t H5F_get_min_dset_ohdr(const H5F_t *f);
H5_DLL herr_t H5F_set_min_dset_ohdr(H5F_t *f, hbool_t minimize);
H5_DLL const H5VL_class_t *H5F_get_vol_cls(const H5F_t *f);
H5_DLL H5VL_object_t *H5F_get_vol_obj(const H5F_t *f);
+H5_DLL hbool_t H5F_get_file_locking(const H5F_t *f);
/* Functions than retrieve values set/cached from the superblock/FCPL */
H5_DLL haddr_t H5F_get_base_addr(const H5F_t *f);
diff --git a/src/H5Fquery.c b/src/H5Fquery.c
index 565f492..51f2194 100644
--- a/src/H5Fquery.c
+++ b/src/H5Fquery.c
@@ -1363,3 +1363,24 @@ done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F_get_cont_info */
+
+/*-------------------------------------------------------------------------
+ * Function: H5F_get_file_locking
+ *
+ * Purpose: Get the file locking flag for the file
+ *
+ * Return: TRUE/FALSE
+ *
+ *-------------------------------------------------------------------------
+ */
+hbool_t
+H5F_get_file_locking(const H5F_t *f)
+{
+ FUNC_ENTER_NOAPI_NOINIT_NOERR
+
+ HDassert(f);
+ HDassert(f->shared);
+
+ FUNC_LEAVE_NOAPI(f->shared->use_file_locking)
+} /* end H5F_get_file_locking */
+
diff --git a/src/H5MF.c b/src/H5MF.c
index 48e7936..7531306 100644
--- a/src/H5MF.c
+++ b/src/H5MF.c
@@ -2645,6 +2645,10 @@ H5MF_settle_raw_data_fsm(H5F_t *f, hbool_t *fsm_settled)
HDassert(f->shared);
HDassert(fsm_settled);
+ /* Initialize structs */
+ HDmemset(&fsinfo, 0, sizeof(fsinfo));
+ HDmemset(&fs_stat, 0, sizeof(fs_stat));
+
/*
* Only need to settle things if we are persisting free space and
* the private property in f->shared->null_fsm_addr is not enabled.
diff --git a/test/dsets.c b/test/dsets.c
index d5c11be..ae917cc 100644
--- a/test/dsets.c
+++ b/test/dsets.c
@@ -11334,6 +11334,9 @@ test_bt2_hdr_fd(const char *env_h5_driver, hid_t fapl)
TESTING("Version 2 B-tree chunk index header flush dependencies handled correctly");
+ /* Initialize struct */
+ HDmemset(&info, 0, sizeof(info));
+
/* Skip this test if SWMR I/O is not supported for the VFD specified
* by the environment variable.
*/
diff --git a/test/swmr.c b/test/swmr.c
index 09ea66e..a1bc87d 100644
--- a/test/swmr.c
+++ b/test/swmr.c
@@ -6055,16 +6055,13 @@ error:
} /* end test_file_lock_swmr_concur() */
-
-
#endif /* !(defined(H5_HAVE_FORK && defined(H5_HAVE_WAITPID)) */
/****************************************************************
**
-** test_file_lock_swmr_concur(): low-level file test routine.
-** With the implementation of file locking, this test checks file
-** open with different combinations of flags + SWMR flags.
-** This is for concurrent access.
+** test_file_locking():
+** Tests various combinations of file locking flags and
+** and environment variables.
**
*****************************************************************/
static int
@@ -6242,6 +6239,79 @@ error:
} /* end test_file_locking() */
+/****************************************************************
+**
+** test_different_lock_flags():
+** Tests opening a file multiple times with different lock
+** flags.
+**
+*****************************************************************/
+static int
+test_different_lock_flags(hid_t in_fapl)
+{
+ hid_t fid1 = H5I_INVALID_HID; /* File ID */
+ hid_t fid2 = H5I_INVALID_HID; /* File ID */
+ hid_t fid3 = H5I_INVALID_HID; /* File ID */
+ hid_t fapl_id = H5I_INVALID_HID; /* File access property list */
+ char filename[NAME_BUF_SIZE]; /* File name */
+
+ TESTING("Using different lock flags")
+
+ /* Copy the incoming fapl */
+ if((fapl_id = H5Pcopy(in_fapl)) < 0)
+ TEST_ERROR
+
+ /* Set locking in the fapl */
+ if(H5Pset_file_locking(fapl_id, TRUE, TRUE) < 0)
+ TEST_ERROR
+
+ /* Set the filename to use for this test (dependent on fapl) */
+ h5_fixname(FILENAME[1], fapl_id, filename, sizeof(filename));
+
+ /* Create the test file */
+ if((fid1 = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl_id)) < 0)
+ TEST_ERROR
+
+ /* Open the test file with the same flags (should pass) */
+ if((fid2 = H5Fopen(filename, H5F_ACC_RDWR, fapl_id)) < 0)
+ TEST_ERROR
+
+ /* Unset locking in the fapl */
+ if(H5Pset_file_locking(fapl_id, FALSE, FALSE) < 0)
+ TEST_ERROR
+
+ /* Open the test file with different flags (should FAIL) */
+ H5E_BEGIN_TRY {
+ fid3 = H5Fopen(filename, H5F_ACC_RDWR, fapl_id);
+ } H5E_END_TRY;
+ if(H5I_INVALID_HID != fid3)
+ FAIL_PUTS_ERROR("Should not have been able to open a file with different locking flags")
+
+ /* Close the files */
+ if(H5Fclose(fid1) < 0)
+ TEST_ERROR
+ if(H5Fclose(fid2) < 0)
+ TEST_ERROR
+
+ /* Close the copied property list */
+ if(H5Pclose(fapl_id) < 0)
+ TEST_ERROR
+
+ PASSED();
+
+ return 0;
+
+error:
+ H5E_BEGIN_TRY {
+ H5Pclose(fapl_id);
+ H5Fclose(fid1);
+ H5Fclose(fid2);
+ H5Fclose(fid3);
+ } H5E_END_TRY;
+
+ return -1;
+} /* end test_different_lock_flags() */
+
static int
test_swmr_vfd_flag(void)
{
@@ -7179,8 +7249,12 @@ main(void)
if(NULL == driver || !HDstrcmp(driver, "") || !HDstrcmp(driver, "sec2"))
nerrors += test_swmr_vfd_flag();
- /* This test changes the HDF5_USE_FILE_LOCKING environment variable
- * so it should be run last.
+ /* Test multiple opens via different locking flags */
+ if (use_file_locking && file_locking_enabled)
+ nerrors += test_different_lock_flags(fapl);
+
+ /* These tests change the HDF5_USE_FILE_LOCKING environment variable
+ * so they should be run last.
*/
if (use_file_locking && file_locking_enabled) {
nerrors += test_file_locking(fapl, TRUE, TRUE);
diff --git a/tools/libtest/h5tools_test_utils.c b/tools/libtest/h5tools_test_utils.c
index 12360a7..244fd43 100644
--- a/tools/libtest/h5tools_test_utils.c
+++ b/tools/libtest/h5tools_test_utils.c
@@ -1003,6 +1003,7 @@ test_set_configured_fapl(void)
hid_t fapl_id = H5I_INVALID_HID;
other_fa_t wrong_fa = {0x432, 0xf82, 0x9093};
+#ifdef H5_HAVE_ROS3_VFD
H5FD_ros3_fapl_t ros3_anon_fa = {1, FALSE, "", "", ""};
H5FD_ros3_fapl_t ros3_auth_fa = {
1, /* fapl version */
@@ -1011,6 +1012,8 @@ test_set_configured_fapl(void)
"12345677890abcdef", /* simulate access key ID */
"oiwnerwe9u0234nJw0-aoj+dsf", /* simulate secret key */
};
+#endif /* H5_HAVE_ROS3_VFD */
+#ifdef H5_HAVE_LIBHDFS
H5FD_hdfs_fapl_t hdfs_fa = {
1, /* fapl version */
"", /* namenode name */
@@ -1019,6 +1022,7 @@ test_set_configured_fapl(void)
"", /* user name */
2048, /* stream buffer size */
};
+#endif /* H5_HAVE_LIBHDFS */
unsigned n_cases = 7; /* number of common testcases */
testcase cases[] = {
{ "(common) should fail: no fapl id",
diff --git a/tools/test/h5repack/h5repack.sh.in b/tools/test/h5repack/h5repack.sh.in
index 02f515c..18e6d86 100644
--- a/tools/test/h5repack/h5repack.sh.in
+++ b/tools/test/h5repack/h5repack.sh.in
@@ -678,6 +678,26 @@ VERIFY_INVALIDBOUNDS()
} # end of VERIFY_INVALIDBOUNDS
# -----------------------------------------------------------------------------
+# Expect h5diff to fail
+# Use only by VERIFY_EXTERNAL_CONSOLIDATION
+# -----------------------------------------------------------------------------
+DIFFFAIL()
+{
+ VERIFY h5diff unequal $@
+ (
+ cd $TESTDIR
+ $RUNSERIAL $H5DIFF_BIN -q "$@"
+ )
+ RET=$?
+ if [ $RET == 0 ] ; then
+ echo "*FAILED*"
+ nerrors="`expr $nerrors + 1`"
+ else
+ echo " PASSED"
+ fi
+}
+
+# -----------------------------------------------------------------------------
# Catchall test for repacking with external files
# Loops over all (internally-listed) cases and applies the given arguments
# to h5repack.
diff --git a/tools/test/misc/testfiles/h5mkgrp_version.txt.in b/tools/test/misc/testfiles/h5mkgrp_version.txt.in
index 75c13a5..37dbabd 100644
--- a/tools/test/misc/testfiles/h5mkgrp_version.txt.in
+++ b/tools/test/misc/testfiles/h5mkgrp_version.txt.in
@@ -1 +1 @@
-h5mkgrp: Version @HDF5_PACKAGE_VERSION_STRING@
+h5mkgrp: Version @HDF5_RELEASE_VERSION_STRING@
generated by cgit v0.12 at 2024-12-27 13:32:31 (GMT)