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-rw-r--r--MANIFEST5
-rw-r--r--bin/batch/knl_ctestP.sl18
-rw-r--r--bin/batch/knl_ctestS.sl17
-rw-r--r--bin/batch/sbatch_ctestP.sl17
-rw-r--r--bin/batch/sbatch_ctestS.sl16
-rw-r--r--bin/batch/sbatch_ctestSP.sl3
-rwxr-xr-xconfig/cmake/scripts/CTestScript.cmake609
-rwxr-xr-xconfig/cmake/scripts/wait_H5Tinit.cmake10
-rw-r--r--src/CMakeLists.txt25
9 files changed, 416 insertions, 304 deletions
diff --git a/MANIFEST b/MANIFEST
index e586b3b..e8ab7fe 100644
--- a/MANIFEST
+++ b/MANIFEST
@@ -92,8 +92,12 @@
./bin/timekeeper _DO_NOT_DISTRIBUTE_
./bin/trace
./bin/yodconfigure
+./bin/batch/knl_ctestP.sl
+./bin/batch/knl_ctestS.sl
./bin/batch/knl_ctestSP.sl
./bin/batch/knl_H5detect.sl.in.cmake
+./bin/batch/sbatch_ctestS.sl
+./bin/batch/sbatch_ctestP.sl
./bin/batch/sbatch_ctestSP.sl
./bin/pkgscrpts/h5rmflags _DO_NOT_DISTRIBUTE_
./bin/pkgscrpts/makeHDF5BinaryTarfiles.pl _DO_NOT_DISTRIBUTE_
@@ -3323,6 +3327,7 @@
./config/cmake/scripts/CTestScript.cmake
./config/cmake/scripts/HDF5config.cmake
./config/cmake/scripts/HDF5options.cmake
+./config/cmake/scripts/wait_H5Tinit.cmake
# Files generated by autogen
./aclocal.m4
diff --git a/bin/batch/knl_ctestP.sl b/bin/batch/knl_ctestP.sl
new file mode 100644
index 0000000..3a03fe2
--- /dev/null
+++ b/bin/batch/knl_ctestP.sl
@@ -0,0 +1,18 @@
+#!/bin/bash
+
+#SBATCH -p knl -C quad,flat
+#SBATCH --nodes=1
+#SBATCH -t 00:30:00
+#SBATCH --mail-type=BEGIN,END,FAIL
+##SBATCH --mail-user=<username>@sandia.gov
+#SBATCH --export=ALL
+#SBATCH --job-name=h5_ctestS
+
+cd build
+#run parallel tests except t_cache_image test
+CMD="ctest . -R TEST_PAR|PH5DIFF|PERFORM -E t_cache_image -C Release -T test"
+
+echo "Run $CMD. Test output will be in build/ctestP.out"
+$CMD >& ctestP.out
+echo "Done running $CMD"
+
diff --git a/bin/batch/knl_ctestS.sl b/bin/batch/knl_ctestS.sl
new file mode 100644
index 0000000..5b77c5b
--- /dev/null
+++ b/bin/batch/knl_ctestS.sl
@@ -0,0 +1,17 @@
+#!/bin/bash
+
+#SBATCH -p knl -C quad,flat
+#SBATCH --nodes=1
+#SBATCH -t 00:30:00
+#SBATCH --mail-type=BEGIN,END,FAIL
+##SBATCH --mail-user=<username>@sandia.gov
+#SBATCH --export=ALL
+#SBATCH --job-name=h5_ctestS
+
+cd build
+CMD="ctest . -E TEST_PAR|H5DIFF|PERFORM -C Release -j 32 -T test"
+
+echo "Run $CMD. Test output will be in build/ctestS.out"
+$CMD >& ctestS.out
+echo "Done running $CMD"
+
diff --git a/bin/batch/sbatch_ctestP.sl b/bin/batch/sbatch_ctestP.sl
new file mode 100644
index 0000000..e967dce
--- /dev/null
+++ b/bin/batch/sbatch_ctestP.sl
@@ -0,0 +1,17 @@
+#!/bin/bash
+
+#SBATCH --nodes=1
+#SBATCH -t 00:30:00
+#SBATCH --mail-type=BEGIN,END,FAIL
+##SBATCH --mail-user=<username>@sandia.gov
+#SBATCH --export=ALL
+#SBATCH --job-name=h5_ctestS
+
+
+cd build
+CMD="ctest . -R TEST_PAR|PH5DIFF|PERFORM -E t_cache_image -C Release -T test"
+
+echo "Run $CMD. Test output will be in build/ctestP.out"
+$CMD >& ctestP.out
+echo "Done running $CMD"
+
diff --git a/bin/batch/sbatch_ctestS.sl b/bin/batch/sbatch_ctestS.sl
new file mode 100644
index 0000000..a103356
--- /dev/null
+++ b/bin/batch/sbatch_ctestS.sl
@@ -0,0 +1,16 @@
+#!/bin/bash
+
+#SBATCH --nodes=1
+#SBATCH -t 00:30:00
+#SBATCH --mail-type=BEGIN,END,FAIL
+##SBATCH --mail-user=<username>@sandia.gov
+#SBATCH --export=ALL
+#SBATCH --job-name=h5_ctestS
+
+
+cd build
+CMD="ctest . -E TEST_PAR|H5DIFF|PERFORM -C Release -j 32 -T test"
+
+echo "Run $CMD. Test output will be in build/ctestS.out"
+$CMD >& ctestS.out
+echo "Done running $CMD"
diff --git a/bin/batch/sbatch_ctestSP.sl b/bin/batch/sbatch_ctestSP.sl
index 56da347..5d79d9b 100644
--- a/bin/batch/sbatch_ctestSP.sl
+++ b/bin/batch/sbatch_ctestSP.sl
@@ -1,6 +1,5 @@
#!/bin/bash
-#SBATCH -p knl -C quad,flat
#SBATCH --nodes=1
#SBATCH -t 01:00:00
#SBATCH --mail-type=BEGIN,END,FAIL
@@ -8,8 +7,6 @@
#SBATCH --export=ALL
#SBATCH --job-name=h5_ctestS
-module load cmake
-module load craype-hugepages4M
cd build
CMD="ctest . -E TEST_PAR|H5DIFF|PERFORM -C Release -j 32 -T test"
diff --git a/config/cmake/scripts/CTestScript.cmake b/config/cmake/scripts/CTestScript.cmake
index 43cd48d..fd56ffa 100755
--- a/config/cmake/scripts/CTestScript.cmake
+++ b/config/cmake/scripts/CTestScript.cmake
@@ -9,298 +9,325 @@
# If you do not have access to either file, you may request a copy from
# help@hdfgroup.org.
#
-cmake_minimum_required (VERSION 3.10)
-########################################################
-# This dashboard is maintained by The HDF Group
-# For any comments please contact cdashhelp@hdfgroup.org
-#
-########################################################
-# -----------------------------------------------------------
-# -- Get environment
-# -----------------------------------------------------------
-if (NOT SITE_OS_NAME)
- ## machine name not provided - attempt to discover with uname
- ## -- set hostname
- ## --------------------------
- find_program (HOSTNAME_CMD NAMES hostname)
- exec_program (${HOSTNAME_CMD} ARGS OUTPUT_VARIABLE HOSTNAME)
- set (CTEST_SITE "${HOSTNAME}${CTEST_SITE_EXT}")
- find_program (UNAME NAMES uname)
- macro (getuname name flag)
- exec_program ("${UNAME}" ARGS "${flag}" OUTPUT_VARIABLE "${name}")
- endmacro ()
-
- getuname (osname -s)
- getuname (osrel -r)
- getuname (cpu -m)
- message (STATUS "Dashboard script uname output: ${osname}-${osrel}-${cpu}\n")
-
- set (CTEST_BUILD_NAME "${osname}-${osrel}-${cpu}")
- if (SITE_BUILDNAME_SUFFIX)
- set (CTEST_BUILD_NAME "${SITE_BUILDNAME_SUFFIX}-${CTEST_BUILD_NAME}")
- endif ()
- set (BUILD_OPTIONS "${ADD_BUILD_OPTIONS}")
-else ()
- ## machine name provided
- ## --------------------------
- if (CMAKE_HOST_UNIX)
- set (CTEST_BUILD_NAME "${SITE_OS_NAME}-${SITE_OS_VERSION}-${SITE_OS_BITS}-${SITE_COMPILER_NAME}-${SITE_COMPILER_VERSION}")
- else ()
- set (CTEST_BUILD_NAME "${SITE_OS_NAME}-${SITE_OS_VERSION}-${SITE_COMPILER_NAME}")
- endif ()
- if (SITE_BUILDNAME_SUFFIX)
- set (CTEST_BUILD_NAME "${CTEST_BUILD_NAME}-${SITE_BUILDNAME_SUFFIX}")
- endif ()
- set (BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DSITE:STRING=${CTEST_SITE} -DBUILDNAME:STRING=${CTEST_BUILD_NAME}")
-endif ()
-
-#-----------------------------------------------------------------------------
-# MAC machines need special option
-#-----------------------------------------------------------------------------
-if (APPLE)
- # Compiler choice
- execute_process (COMMAND xcrun --find cc OUTPUT_VARIABLE XCODE_CC OUTPUT_STRIP_TRAILING_WHITESPACE)
- execute_process (COMMAND xcrun --find c++ OUTPUT_VARIABLE XCODE_CXX OUTPUT_STRIP_TRAILING_WHITESPACE)
- set (ENV{CC} "${XCODE_CC}")
- set (ENV{CXX} "${XCODE_CXX}")
-
- set (BUILD_OPTIONS "${BUILD_OPTIONS} -DCTEST_USE_LAUNCHERS:BOOL=ON -DCMAKE_BUILD_WITH_INSTALL_RPATH:BOOL=OFF")
-endif ()
-
-#-----------------------------------------------------------------------------
-set (NEED_REPOSITORY_CHECKOUT 0)
-set (CTEST_CMAKE_COMMAND "\"${CMAKE_COMMAND}\"")
-if (CTEST_USE_TAR_SOURCE)
- ## Uncompress source if tar file provided
- ## --------------------------
- if (WIN32)
- message (STATUS "extracting... [${CMAKE_EXECUTABLE_NAME} x ${CTEST_DASHBOARD_ROOT}\\${CTEST_USE_TAR_SOURCE}.zip]")
- execute_process (COMMAND ${CMAKE_EXECUTABLE_NAME} -E tar -xvf ${CTEST_DASHBOARD_ROOT}\\${CTEST_USE_TAR_SOURCE}.zip RESULT_VARIABLE rv)
- else ()
- message (STATUS "extracting... [${CMAKE_EXECUTABLE_NAME} -E tar -xvf ${CTEST_DASHBOARD_ROOT}/${CTEST_USE_TAR_SOURCE}.tar]")
- execute_process (COMMAND ${CMAKE_EXECUTABLE_NAME} -E tar -xvf ${CTEST_DASHBOARD_ROOT}/${CTEST_USE_TAR_SOURCE}.tar RESULT_VARIABLE rv)
- endif ()
-
- if (NOT rv EQUAL 0)
- message (STATUS "extracting... [error-(${rv}) clean up]")
- file (REMOVE_RECURSE "${CTEST_SOURCE_DIRECTORY}")
- message (FATAL_ERROR "error: extract of ${CTEST_USE_TAR_SOURCE} failed")
- endif ()
-
- file (RENAME ${CTEST_DASHBOARD_ROOT}/${CTEST_USE_TAR_SOURCE} ${CTEST_SOURCE_DIRECTORY})
- set (LOCAL_SKIP_UPDATE "TRUE")
-else ()
- if (LOCAL_UPDATE)
- if (CTEST_USE_GIT_SOURCE)
- find_program (CTEST_GIT_COMMAND NAMES git git.cmd)
- set (CTEST_GIT_UPDATE_OPTIONS)
-
- if (NOT EXISTS "${CTEST_SOURCE_DIRECTORY}")
- set (NEED_REPOSITORY_CHECKOUT 1)
- endif ()
-
- if (${NEED_REPOSITORY_CHECKOUT})
- if (REPOSITORY_BRANCH)
- set (CTEST_GIT_options "clone \"${REPOSITORY_URL}\" --branch \"${REPOSITORY_BRANCH}\" --single-branch \"${CTEST_SOURCE_DIRECTORY}\" --recurse-submodules")
- else ()
- set (CTEST_GIT_options "clone \"${REPOSITORY_URL}\" \"${CTEST_SOURCE_DIRECTORY}\" --recurse-submodules")
- endif ()
- set (CTEST_CHECKOUT_COMMAND "${CTEST_GIT_COMMAND} ${CTEST_GIT_options}")
- else ()
- set (CTEST_GIT_options "pull")
- endif ()
- set (CTEST_UPDATE_COMMAND "${CTEST_GIT_COMMAND}")
- else ()
- ## --------------------------
- ## use subversion to get source
- #-----------------------------------------------------------------------------
- ## cygwin does not handle the find_package() call
- ## --------------------------
- set (CTEST_UPDATE_COMMAND "SVNCommand")
- if (NOT SITE_CYGWIN})
- find_package (Subversion)
- set (CTEST_SVN_COMMAND "${Subversion_SVN_EXECUTABLE}")
- set (CTEST_UPDATE_COMMAND "${Subversion_SVN_EXECUTABLE}")
- else ()
- set (CTEST_SVN_COMMAND "/usr/bin/svn")
- set (CTEST_UPDATE_COMMAND "/usr/bin/svn")
- endif ()
-
- if (NOT EXISTS "${CTEST_SOURCE_DIRECTORY}")
- set (NEED_REPOSITORY_CHECKOUT 1)
- endif ()
-
- if (NOT CTEST_REPO_VERSION)
- set (CTEST_REPO_VERSION "HEAD")
- endif ()
- if (${NEED_REPOSITORY_CHECKOUT})
- set (CTEST_CHECKOUT_COMMAND
- "\"${CTEST_SVN_COMMAND}\" co ${REPOSITORY_URL} \"${CTEST_SOURCE_DIRECTORY}\" -r ${CTEST_REPO_VERSION}")
- else ()
- if (CTEST_REPO_VERSION)
- set (CTEST_SVN_UPDATE_OPTIONS "-r ${CTEST_REPO_VERSION}")
- endif ()
- endif ()
- endif ()
- endif ()
-endif ()
-
-#-----------------------------------------------------------------------------
-## Clear the build directory
-## --------------------------
-set (CTEST_START_WITH_EMPTY_BINARY_DIRECTORY TRUE)
-if (NOT EXISTS "${CTEST_BINARY_DIRECTORY}")
- file (MAKE_DIRECTORY "${CTEST_BINARY_DIRECTORY}")
-else ()
- ctest_empty_binary_directory (${CTEST_BINARY_DIRECTORY})
-endif ()
-
-# Use multiple CPU cores to build
-include (ProcessorCount)
-ProcessorCount (N)
-if (NOT N EQUAL 0)
- if (NOT WIN32)
- set (CTEST_BUILD_FLAGS -j${N})
- endif ()
- set (ctest_test_args ${ctest_test_args} PARALLEL_LEVEL ${N})
-endif ()
-
-#-----------------------------------------------------------------------------
-# Send the main script as a note.
-list (APPEND CTEST_NOTES_FILES
- "${CTEST_SCRIPT_DIRECTORY}/${CTEST_SCRIPT_NAME}"
- "${CMAKE_CURRENT_LIST_FILE}"
- "${CTEST_SOURCE_DIRECTORY}/config/cmake/cacheinit.cmake"
-)
-
-#-----------------------------------------------------------------------------
-# Check for required variables.
-# --------------------------
-foreach (req
- CTEST_CMAKE_GENERATOR
- CTEST_SITE
- CTEST_BUILD_NAME
- )
- if (NOT DEFINED ${req})
- message (FATAL_ERROR "The containing script must set ${req}")
- endif ()
-endforeach ()
-
-#-----------------------------------------------------------------------------
-# Initialize the CTEST commands
-#------------------------------
-if(CMAKE_GENERATOR_TOOLSET)
- set(CTEST_CONFIGURE_TOOLSET "-T${CMAKE_GENERATOR_TOOLSET}")
-else ()
- set(CTEST_CONFIGURE_TOOLSET "")
-endif()
-if (LOCAL_MEMCHECK_TEST)
- find_program (CTEST_MEMORYCHECK_COMMAND NAMES valgrind)
- set (CTEST_CONFIGURE_COMMAND
- "${CTEST_CMAKE_COMMAND} -C \"${CTEST_SOURCE_DIRECTORY}/config/cmake/mccacheinit.cmake\" -DCMAKE_BUILD_TYPE:STRING=${CTEST_CONFIGURATION_TYPE} ${BUILD_OPTIONS} \"-G${CTEST_CMAKE_GENERATOR}\" \"${CTEST_CONFIGURE_TOOLSET}\" \"${CTEST_SOURCE_DIRECTORY}\""
- )
-else ()
- if (LOCAL_COVERAGE_TEST)
- find_program (CTEST_COVERAGE_COMMAND NAMES gcov)
- endif ()
- set (CTEST_CONFIGURE_COMMAND
- "${CTEST_CMAKE_COMMAND} -C \"${CTEST_SOURCE_DIRECTORY}/config/cmake/cacheinit.cmake\" -DCMAKE_BUILD_TYPE:STRING=${CTEST_CONFIGURATION_TYPE} ${BUILD_OPTIONS} \"-G${CTEST_CMAKE_GENERATOR}\" \"${CTEST_CONFIGURE_TOOLSET}\" \"${CTEST_SOURCE_DIRECTORY}\""
- )
-endif ()
-
-#-----------------------------------------------------------------------------
-## -- set output to english
-set ($ENV{LC_MESSAGES} "en_EN")
-
-# Print summary information.
-foreach (v
- CTEST_SITE
- CTEST_BUILD_NAME
- CTEST_SOURCE_DIRECTORY
- CTEST_BINARY_DIRECTORY
- CTEST_CMAKE_GENERATOR
- CTEST_CONFIGURATION_TYPE
- CTEST_GIT_COMMAND
- CTEST_CHECKOUT_COMMAND
- CTEST_CONFIGURE_COMMAND
- CTEST_SCRIPT_DIRECTORY
- CTEST_USE_LAUNCHERS
- )
- set (vars "${vars} ${v}=[${${v}}]\n")
-endforeach ()
-message (STATUS "Dashboard script configuration:\n${vars}\n")
-
-#-----------------------------------------------------------------------------
-#-----------------------------------------------------------------------------
- ## NORMAL process
- ## -- LOCAL_UPDATE updates the source folder from svn
- ## -- LOCAL_SUBMIT reports to CDash server
- ## -- LOCAL_SKIP_TEST skips the test process (only builds)
- ## -- LOCAL_MEMCHECK_TEST executes the Valgrind testing
- ## -- LOCAL_COVERAGE_TEST executes code coverage process
- ## --------------------------
- ctest_start (${MODEL} TRACK ${MODEL})
- if (LOCAL_UPDATE)
- ctest_update (SOURCE "${CTEST_SOURCE_DIRECTORY}")
- endif ()
- configure_file (${CTEST_SOURCE_DIRECTORY}/config/cmake/CTestCustom.cmake ${CTEST_BINARY_DIRECTORY}/CTestCustom.cmake)
- ctest_read_custom_files ("${CTEST_BINARY_DIRECTORY}")
- ctest_configure (BUILD "${CTEST_BINARY_DIRECTORY}" RETURN_VALUE res)
- if (LOCAL_SUBMIT)
- ctest_submit (PARTS Update Configure Notes)
- endif ()
- if (${res} LESS 0 OR ${res} GREATER 0)
- file (APPEND ${CTEST_SCRIPT_DIRECTORY}/FailedCTest.txt "Failed Configure: ${res}\n")
- endif ()
-
- ctest_build (BUILD "${CTEST_BINARY_DIRECTORY}" APPEND RETURN_VALUE res NUMBER_ERRORS errval)
- if (LOCAL_SUBMIT)
- ctest_submit (PARTS Build)
- endif ()
- if (${res} LESS 0 OR ${res} GREATER 0 OR ${errval} GREATER 0)
- file (APPEND ${CTEST_SCRIPT_DIRECTORY}/FailedCTest.txt "Failed ${errval} Build: ${res}\n")
- endif ()
-
- if (NOT LOCAL_SKIP_TEST)
- if (NOT LOCAL_MEMCHECK_TEST)
+cmake_minimum_required (VERSION 3.10)
+########################################################
+# This dashboard is maintained by The HDF Group
+# For any comments please contact cdashhelp@hdfgroup.org
+#
+########################################################
+# -----------------------------------------------------------
+# -- Get environment
+# -----------------------------------------------------------
+if (NOT SITE_OS_NAME)
+ ## machine name not provided - attempt to discover with uname
+ ## -- set hostname
+ ## --------------------------
+ find_program (HOSTNAME_CMD NAMES hostname)
+ exec_program (${HOSTNAME_CMD} ARGS OUTPUT_VARIABLE HOSTNAME)
+ set (CTEST_SITE "${HOSTNAME}${CTEST_SITE_EXT}")
+ find_program (UNAME NAMES uname)
+ macro (getuname name flag)
+ exec_program ("${UNAME}" ARGS "${flag}" OUTPUT_VARIABLE "${name}")
+ endmacro ()
+
+ getuname (osname -s)
+ getuname (osrel -r)
+ getuname (cpu -m)
+ message (STATUS "Dashboard script uname output: ${osname}-${osrel}-${cpu}\n")
+
+ set (CTEST_BUILD_NAME "${osname}-${osrel}-${cpu}")
+ if (SITE_BUILDNAME_SUFFIX)
+ set (CTEST_BUILD_NAME "${SITE_BUILDNAME_SUFFIX}-${CTEST_BUILD_NAME}")
+ endif ()
+ set (BUILD_OPTIONS "${ADD_BUILD_OPTIONS}")
+else ()
+ ## machine name provided
+ ## --------------------------
+ if (CMAKE_HOST_UNIX)
+ set (CTEST_BUILD_NAME "${SITE_OS_NAME}-${SITE_OS_VERSION}-${SITE_OS_BITS}-${SITE_COMPILER_NAME}-${SITE_COMPILER_VERSION}")
+ else ()
+ set (CTEST_BUILD_NAME "${SITE_OS_NAME}-${SITE_OS_VERSION}-${SITE_COMPILER_NAME}")
+ endif ()
+ if (SITE_BUILDNAME_SUFFIX)
+ set (CTEST_BUILD_NAME "${CTEST_BUILD_NAME}-${SITE_BUILDNAME_SUFFIX}")
+ endif ()
+ set (BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DSITE:STRING=${CTEST_SITE} -DBUILDNAME:STRING=${CTEST_BUILD_NAME}")
+endif ()
+
+#-----------------------------------------------------------------------------
+# MAC machines need special option
+#-----------------------------------------------------------------------------
+if (APPLE)
+ # Compiler choice
+ execute_process (COMMAND xcrun --find cc OUTPUT_VARIABLE XCODE_CC OUTPUT_STRIP_TRAILING_WHITESPACE)
+ execute_process (COMMAND xcrun --find c++ OUTPUT_VARIABLE XCODE_CXX OUTPUT_STRIP_TRAILING_WHITESPACE)
+ set (ENV{CC} "${XCODE_CC}")
+ set (ENV{CXX} "${XCODE_CXX}")
+
+ set (BUILD_OPTIONS "${BUILD_OPTIONS} -DCTEST_USE_LAUNCHERS:BOOL=ON -DCMAKE_BUILD_WITH_INSTALL_RPATH:BOOL=OFF")
+endif ()
+
+#-----------------------------------------------------------------------------
+set (NEED_REPOSITORY_CHECKOUT 0)
+set (CTEST_CMAKE_COMMAND "\"${CMAKE_COMMAND}\"")
+if (CTEST_USE_TAR_SOURCE)
+ ## Uncompress source if tar file provided
+ ## --------------------------
+ if (WIN32)
+ message (STATUS "extracting... [${CMAKE_EXECUTABLE_NAME} x ${CTEST_DASHBOARD_ROOT}\\${CTEST_USE_TAR_SOURCE}.zip]")
+ execute_process (COMMAND ${CMAKE_EXECUTABLE_NAME} -E tar -xvf ${CTEST_DASHBOARD_ROOT}\\${CTEST_USE_TAR_SOURCE}.zip RESULT_VARIABLE rv)
+ else ()
+ message (STATUS "extracting... [${CMAKE_EXECUTABLE_NAME} -E tar -xvf ${CTEST_DASHBOARD_ROOT}/${CTEST_USE_TAR_SOURCE}.tar]")
+ execute_process (COMMAND ${CMAKE_EXECUTABLE_NAME} -E tar -xvf ${CTEST_DASHBOARD_ROOT}/${CTEST_USE_TAR_SOURCE}.tar RESULT_VARIABLE rv)
+ endif ()
+
+ if (NOT rv EQUAL 0)
+ message (STATUS "extracting... [error-(${rv}) clean up]")
+ file (REMOVE_RECURSE "${CTEST_SOURCE_DIRECTORY}")
+ message (FATAL_ERROR "error: extract of ${CTEST_USE_TAR_SOURCE} failed")
+ endif ()
+
+ file (RENAME ${CTEST_DASHBOARD_ROOT}/${CTEST_USE_TAR_SOURCE} ${CTEST_SOURCE_DIRECTORY})
+ set (LOCAL_SKIP_UPDATE "TRUE")
+else ()
+ if (LOCAL_UPDATE)
+ if (CTEST_USE_GIT_SOURCE)
+ find_program (CTEST_GIT_COMMAND NAMES git git.cmd)
+ set (CTEST_GIT_UPDATE_OPTIONS)
+
+ if (NOT EXISTS "${CTEST_SOURCE_DIRECTORY}")
+ set (NEED_REPOSITORY_CHECKOUT 1)
+ endif ()
+
+ if (${NEED_REPOSITORY_CHECKOUT})
+ if (REPOSITORY_BRANCH)
+ set (CTEST_GIT_options "clone \"${REPOSITORY_URL}\" --branch \"${REPOSITORY_BRANCH}\" --single-branch \"${CTEST_SOURCE_DIRECTORY}\" --recurse-submodules")
+ else ()
+ set (CTEST_GIT_options "clone \"${REPOSITORY_URL}\" \"${CTEST_SOURCE_DIRECTORY}\" --recurse-submodules")
+ endif ()
+ set (CTEST_CHECKOUT_COMMAND "${CTEST_GIT_COMMAND} ${CTEST_GIT_options}")
+ else ()
+ set (CTEST_GIT_options "pull")
+ endif ()
+ set (CTEST_UPDATE_COMMAND "${CTEST_GIT_COMMAND}")
+ else ()
+ ## --------------------------
+ ## use subversion to get source
+ #-----------------------------------------------------------------------------
+ ## cygwin does not handle the find_package() call
+ ## --------------------------
+ set (CTEST_UPDATE_COMMAND "SVNCommand")
+ if (NOT SITE_CYGWIN})
+ find_package (Subversion)
+ set (CTEST_SVN_COMMAND "${Subversion_SVN_EXECUTABLE}")
+ set (CTEST_UPDATE_COMMAND "${Subversion_SVN_EXECUTABLE}")
+ else ()
+ set (CTEST_SVN_COMMAND "/usr/bin/svn")
+ set (CTEST_UPDATE_COMMAND "/usr/bin/svn")
+ endif ()
+
+ if (NOT EXISTS "${CTEST_SOURCE_DIRECTORY}")
+ set (NEED_REPOSITORY_CHECKOUT 1)
+ endif ()
+
+ if (NOT CTEST_REPO_VERSION)
+ set (CTEST_REPO_VERSION "HEAD")
+ endif ()
+ if (${NEED_REPOSITORY_CHECKOUT})
+ set (CTEST_CHECKOUT_COMMAND
+ "\"${CTEST_SVN_COMMAND}\" co ${REPOSITORY_URL} \"${CTEST_SOURCE_DIRECTORY}\" -r ${CTEST_REPO_VERSION}")
+ else ()
+ if (CTEST_REPO_VERSION)
+ set (CTEST_SVN_UPDATE_OPTIONS "-r ${CTEST_REPO_VERSION}")
+ endif ()
+ endif ()
+ endif ()
+ endif ()
+endif ()
+
+#-----------------------------------------------------------------------------
+## Clear the build directory
+## --------------------------
+set (CTEST_START_WITH_EMPTY_BINARY_DIRECTORY TRUE)
+if (NOT EXISTS "${CTEST_BINARY_DIRECTORY}")
+ file (MAKE_DIRECTORY "${CTEST_BINARY_DIRECTORY}")
+else ()
+ ctest_empty_binary_directory (${CTEST_BINARY_DIRECTORY})
+endif ()
+
+# Use multiple CPU cores to build
+include (ProcessorCount)
+ProcessorCount (N)
+if (NOT N EQUAL 0)
+ if (NOT WIN32)
+ set (CTEST_BUILD_FLAGS -j${N})
+ endif ()
+ set (ctest_test_args ${ctest_test_args} PARALLEL_LEVEL ${N})
+endif ()
+
+#-----------------------------------------------------------------------------
+# Send the main script as a note.
+list (APPEND CTEST_NOTES_FILES
+ "${CTEST_SCRIPT_DIRECTORY}/${CTEST_SCRIPT_NAME}"
+ "${CMAKE_CURRENT_LIST_FILE}"
+ "${CTEST_SOURCE_DIRECTORY}/config/cmake/cacheinit.cmake"
+)
+
+#-----------------------------------------------------------------------------
+# Check for required variables.
+# --------------------------
+foreach (req
+ CTEST_CMAKE_GENERATOR
+ CTEST_SITE
+ CTEST_BUILD_NAME
+ )
+ if (NOT DEFINED ${req})
+ message (FATAL_ERROR "The containing script must set ${req}")
+ endif ()
+endforeach ()
+
+#-----------------------------------------------------------------------------
+# Initialize the CTEST commands
+#------------------------------
+if(CMAKE_GENERATOR_TOOLSET)
+ set(CTEST_CONFIGURE_TOOLSET "-T${CMAKE_GENERATOR_TOOLSET}")
+else ()
+ set(CTEST_CONFIGURE_TOOLSET "")
+endif()
+if (LOCAL_MEMCHECK_TEST)
+ find_program (CTEST_MEMORYCHECK_COMMAND NAMES valgrind)
+ set (CTEST_CONFIGURE_COMMAND
+ "${CTEST_CMAKE_COMMAND} -C \"${CTEST_SOURCE_DIRECTORY}/config/cmake/mccacheinit.cmake\" -DCMAKE_BUILD_TYPE:STRING=${CTEST_CONFIGURATION_TYPE} ${BUILD_OPTIONS} \"-G${CTEST_CMAKE_GENERATOR}\" \"${CTEST_CONFIGURE_TOOLSET}\" \"${CTEST_SOURCE_DIRECTORY}\""
+ )
+else ()
+ if (LOCAL_COVERAGE_TEST)
+ find_program (CTEST_COVERAGE_COMMAND NAMES gcov)
+ endif ()
+ set (CTEST_CONFIGURE_COMMAND
+ "${CTEST_CMAKE_COMMAND} -C \"${CTEST_SOURCE_DIRECTORY}/config/cmake/cacheinit.cmake\" -DCMAKE_BUILD_TYPE:STRING=${CTEST_CONFIGURATION_TYPE} ${BUILD_OPTIONS} \"-G${CTEST_CMAKE_GENERATOR}\" \"${CTEST_CONFIGURE_TOOLSET}\" \"${CTEST_SOURCE_DIRECTORY}\""
+ )
+endif ()
+
+#-----------------------------------------------------------------------------
+## -- set output to english
+set ($ENV{LC_MESSAGES} "en_EN")
+
+# Print summary information.
+foreach (v
+ CTEST_SITE
+ CTEST_BUILD_NAME
+ CTEST_SOURCE_DIRECTORY
+ CTEST_BINARY_DIRECTORY
+ CTEST_CMAKE_GENERATOR
+ CTEST_CONFIGURATION_TYPE
+ CTEST_GIT_COMMAND
+ CTEST_CHECKOUT_COMMAND
+ CTEST_CONFIGURE_COMMAND
+ CTEST_SCRIPT_DIRECTORY
+ CTEST_USE_LAUNCHERS
+ )
+ set (vars "${vars} ${v}=[${${v}}]\n")
+endforeach ()
+message (STATUS "Dashboard script configuration:\n${vars}\n")
+
+#-----------------------------------------------------------------------------
+#-----------------------------------------------------------------------------
+ ## NORMAL process
+ ## -- LOCAL_UPDATE updates the source folder from svn
+ ## -- LOCAL_SUBMIT reports to CDash server
+ ## -- LOCAL_SKIP_TEST skips the test process (only builds)
+ ## -- LOCAL_MEMCHECK_TEST executes the Valgrind testing
+ ## -- LOCAL_COVERAGE_TEST executes code coverage process
+ ## --------------------------
+ ctest_start (${MODEL} TRACK ${MODEL})
+ if (LOCAL_UPDATE)
+ ctest_update (SOURCE "${CTEST_SOURCE_DIRECTORY}")
+ endif ()
+ configure_file (${CTEST_SOURCE_DIRECTORY}/config/cmake/CTestCustom.cmake ${CTEST_BINARY_DIRECTORY}/CTestCustom.cmake)
+ ctest_read_custom_files ("${CTEST_BINARY_DIRECTORY}")
+ ctest_configure (BUILD "${CTEST_BINARY_DIRECTORY}" RETURN_VALUE res)
+ if (LOCAL_SUBMIT)
+ ctest_submit (PARTS Update Configure Notes)
+ endif ()
+ if (${res} LESS 0 OR ${res} GREATER 0)
+ file (APPEND ${CTEST_SCRIPT_DIRECTORY}/FailedCTest.txt "Failed Configure: ${res}\n")
+ endif ()
+
+ ctest_build (BUILD "${CTEST_BINARY_DIRECTORY}" APPEND RETURN_VALUE res NUMBER_ERRORS errval)
+ if (LOCAL_SUBMIT)
+ ctest_submit (PARTS Build)
+ endif ()
+ if (${res} LESS 0 OR ${res} GREATER 0 OR ${errval} GREATER 0)
+ file (APPEND ${CTEST_SCRIPT_DIRECTORY}/FailedCTest.txt "Failed ${errval} Build: ${res}\n")
+ endif ()
+
+ if (NOT LOCAL_SKIP_TEST)
+ if (NOT LOCAL_MEMCHECK_TEST)
if (NOT LOCAL_BATCH_TEST)
ctest_test (BUILD "${CTEST_BINARY_DIRECTORY}" APPEND ${ctest_test_args} RETURN_VALUE res)
+ if (LOCAL_SUBMIT)
+ ctest_submit (PARTS Test)
+ endif ()
else ()
- execute_process (COMMAND ${LOCAL_BATCH_SCRIPT_COMMAND} ${LOCAL_BATCH_SCRIPT_NAME})
+ file(STRINGS ${CTEST_BINARY_DIRECTORY}/Testing/TAG TAG_CONTENTS REGEX "^2([0-9]+)[-]([0-9]+)$")
+ execute_process (COMMAND ${LOCAL_BATCH_SCRIPT_COMMAND} ${CTEST_SOURCE_DIRECTORY}/bin/batch/${LOCAL_BATCH_SCRIPT_NAME})
+ message(STATUS "Check for existence of ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/Test.xml")
+ execute_process(COMMAND ls ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/Test.xml RESULT_VARIABLE result OUTPUT_QUIET ERROR_QUIET)
+ while(result)
+ ctest_sleep(60)
+ message(STATUS "Checking again for existence of ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/Test.xml")
+ execute_process(COMMAND ls ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/Test.xml RESULT_VARIABLE result OUTPUT_QUIET ERROR_QUIET)
+ endwhile(result)
+ if (LOCAL_SUBMIT)
+ ctest_submit (PARTS Test)
+ endif ()
+ message(STATUS "Found ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/Test.xml. Renaming to SerialTest.xml")
+ file (RENAME ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/Test.xml ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/SerialTest.xml)
+ message(STATUS "Check for existence of ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/Test.xml")
+ unset(result CACHE)
+ execute_process (COMMAND ${LOCAL_BATCH_SCRIPT_COMMAND} ${CTEST_SOURCE_DIRECTORY}/bin/batch/${LOCAL_BATCH_SCRIPT_PARALLEL_NAME})
+ message(STATUS "Check for existence of ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/Test.xml")
+ execute_process(COMMAND ls ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/Test.xml RESULT_VARIABLE result OUTPUT_QUIET ERROR_QUIET)
+ while(result)
+ ctest_sleep(60)
+ message(STATUS "Checking again for existence of ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/Test.xml")
+ execute_process(COMMAND ls ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/Test.xml RESULT_VARIABLE result OUTPUT_QUIET ERROR_QUIET)
+ endwhile(result)
+ if (LOCAL_SUBMIT)
+ ctest_submit (PARTS Test)
+ endif ()
+ message(STATUS "Found ${CTEST_BINARY_DIRECTORY}/Testing/${TAG_CONTENTS}/Test.xml. Done with parallel batch tests.")
+ endif ()
+ if (${res} LESS 0 OR ${res} GREATER 0)
+ file (APPEND ${CTEST_SCRIPT_DIRECTORY}/FailedCTest.txt "Failed Tests: ${res}\n")
+ endif ()
+ else ()
+ ctest_memcheck (BUILD "${CTEST_BINARY_DIRECTORY}" APPEND ${ctest_test_args})
+ if (LOCAL_SUBMIT)
+ ctest_submit (PARTS MemCheck)
+ endif ()
+ endif ()
+ if (LOCAL_COVERAGE_TEST)
+ ctest_coverage (BUILD "${CTEST_BINARY_DIRECTORY}" APPEND)
+ if (LOCAL_SUBMIT)
+ ctest_submit (PARTS Coverage)
endif ()
- if (LOCAL_SUBMIT)
- ctest_submit (PARTS Test)
- endif ()
- if (${res} LESS 0 OR ${res} GREATER 0)
- file (APPEND ${CTEST_SCRIPT_DIRECTORY}/FailedCTest.txt "Failed Tests: ${res}\n")
- endif ()
- else ()
- ctest_memcheck (BUILD "${CTEST_BINARY_DIRECTORY}" APPEND ${ctest_test_args})
- if (LOCAL_SUBMIT)
- ctest_submit (PARTS MemCheck)
- endif ()
- endif ()
- if (LOCAL_COVERAGE_TEST)
- ctest_coverage (BUILD "${CTEST_BINARY_DIRECTORY}" APPEND)
- if (LOCAL_SUBMIT)
- ctest_submit (PARTS Coverage)
- endif ()
- endif ()
- endif ()
-
- if (NOT LOCAL_MEMCHECK_TEST AND NOT LOCAL_NO_PACKAGE AND NOT LOCAL_SKIP_BUILD)
- ##-----------------------------------------------
- ## Package the product
- ##-----------------------------------------------
- execute_process (COMMAND cpack -C ${CTEST_CONFIGURATION_TYPE} -V
- WORKING_DIRECTORY ${CTEST_BINARY_DIRECTORY}
- RESULT_VARIABLE cpackResult
- OUTPUT_VARIABLE cpackLog
- ERROR_VARIABLE cpackLog.err
- )
- file (WRITE ${CTEST_BINARY_DIRECTORY}/cpack.log "${cpackLog.err}" "${cpackLog}")
- if (cpackResult GREATER 0)
- file (APPEND ${CTEST_SCRIPT_DIRECTORY}/FailedCTest.txt "Failed packaging: ${cpackResult}:${cpackLog.err} \n")
- endif ()
- endif ()
-#-----------------------------------------------------------------------------
+ endif ()
+ endif ()
+
+ if (NOT LOCAL_MEMCHECK_TEST AND NOT LOCAL_NO_PACKAGE AND NOT LOCAL_SKIP_BUILD)
+ ##-----------------------------------------------
+ ## Package the product
+ ##-----------------------------------------------
+ execute_process (COMMAND cpack -C ${CTEST_CONFIGURATION_TYPE} -V
+ WORKING_DIRECTORY ${CTEST_BINARY_DIRECTORY}
+ RESULT_VARIABLE cpackResult
+ OUTPUT_VARIABLE cpackLog
+ ERROR_VARIABLE cpackLog.err
+ )
+ file (WRITE ${CTEST_BINARY_DIRECTORY}/cpack.log "${cpackLog.err}" "${cpackLog}")
+ if (cpackResult GREATER 0)
+ file (APPEND ${CTEST_SCRIPT_DIRECTORY}/FailedCTest.txt "Failed packaging: ${cpackResult}:${cpackLog.err} \n")
+ endif ()
+ endif ()
+#-----------------------------------------------------------------------------
diff --git a/config/cmake/scripts/wait_H5Tinit.cmake b/config/cmake/scripts/wait_H5Tinit.cmake
new file mode 100755
index 0000000..14976ce
--- /dev/null
+++ b/config/cmake/scripts/wait_H5Tinit.cmake
@@ -0,0 +1,10 @@
+cmake_minimum_required (VERSION 3.10)
+
+message(STATUS "Check for existence of ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c")
+execute_process(COMMAND ls ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c RESULT_VARIABLE H5TI_result OUTPUT_QUIET ERROR_QUIET)
+while(H5TI_result)
+ ctest_sleep(30)
+ message(STATUS "Checking again for existence of ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c")
+ execute_process(COMMAND ls ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c RESULT_VARIABLE H5TI_result OUTPUT_QUIET ERROR_QUIET)
+endwhile(H5TI_result)
+message(STATUS "Found ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c")
diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt
index 31a38be..8affc6d 100644
--- a/src/CMakeLists.txt
+++ b/src/CMakeLists.txt
@@ -947,28 +947,33 @@ if (NOT EXISTS ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c)
${HDF5_BINARY_DIR}/${HDF5_BATCH_H5DETECT_SCRIPT} ESCAPE_QUOTES @ONLY
)
add_custom_command (
- OUTPUT ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.tmp
+ OUTPUT ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c
COMMAND ${HDF5_BATCH_CMD}
ARGS ${HDF5_BINARY_DIR}/${HDF5_BATCH_H5DETECT_SCRIPT}
+ COMMAND ${CMAKE_COMMAND}
+ ARGS -E echo "Executed batch command to create H5Tinit.c"
DEPENDS H5detect
WORKING_DIRECTORY ${HDF5_GENERATED_SOURCE_DIR}
)
+ add_custom_target (gen_H5Tinit
+ COMMAND ${CMAKE_COMMAND} -P ${HDF5_SOURCE_DIR}/config/cmake/scripts/wait_H5Tinit.cmake
+ )
else ()
add_custom_command (
- OUTPUT ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.tmp
+ OUTPUT ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c
COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR}$<TARGET_FILE:H5detect>
- ARGS ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.tmp
+ ARGS ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c
DEPENDS H5detect
WORKING_DIRECTORY ${HDF5_GENERATED_SOURCE_DIR}
)
endif ()
- add_custom_target (gen_H5Tinit ALL DEPENDS ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.tmp)
- add_custom_command (
- OUTPUT ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c
- COMMAND ${CMAKE_COMMAND}
- ARGS -E copy_if_different "${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.tmp" "${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c"
- DEPENDS gen_H5Tinit ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.tmp
- )
+# add_custom_target (gen_H5Tinit ALL DEPENDS ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.tmp)
+# add_custom_command (
+# OUTPUT ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c
+# COMMAND ${CMAKE_COMMAND}
+# ARGS -E copy_if_different "${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.tmp" "${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c"
+# DEPENDS gen_H5Tinit ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.tmp
+# )
set_source_files_properties (${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c PROPERTIES GENERATED TRUE)
endif ()
if (BUILD_SHARED_LIBS)
generated by cgit v0.12 at 2024-07-08 11:58:36 (GMT)