diff options
| -rw-r--r-- | CMakeLists.txt | 9 | ||||
| -rwxr-xr-x | config/cmake/scripts/CTestScript.cmake | 83 | ||||
| -rwxr-xr-x | config/cmake/scripts/HDF5config.cmake | 101 | ||||
| -rwxr-xr-x | config/cmake/scripts/HDF5options.cmake | 33 | ||||
| -rw-r--r-- | config/cmake_ext_mod/FindMPI.cmake | 22 | ||||
| -rw-r--r-- | config/cmake_ext_mod/runTest.cmake | 28 | ||||
| -rw-r--r-- | fortran/testpar/CMakeLists.txt | 4 | ||||
| -rw-r--r-- | test/cache_image.c | 7 | ||||
| -rw-r--r-- | tools/test/h5diff/CMakeTests.cmake | 13 |
9 files changed, 176 insertions, 124 deletions
diff --git a/CMakeLists.txt b/CMakeLists.txt index f4b5e09..9016f29 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -877,6 +877,15 @@ if (EXISTS "${HDF5_SOURCE_DIR}/fortran" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/for endif () endif () + # Parallel IO usage requires MPI to be Linked and Included + if (H5_HAVE_PARALLEL) + set (LINK_Fortran_LIBS ${LINK_LIBS} ${MPI_Fortran_LIBRARIES}) + set (LINK_Fortran_SHARED_LIBS ${LINK_SHARED_LIBS} ${MPI_Fortran_LIBRARIES}) + if (MPI_Fortran_LINK_FLAGS) + set (CMAKE_Fortran_EXE_LINKER_FLAGS "${MPI_Fortran_LINK_FLAGS} ${CMAKE_EXE_LINKER_FLAGS}") + endif () + endif () + # ----------------------------------------------------------------------- # wrapper script variables # diff --git a/config/cmake/scripts/CTestScript.cmake b/config/cmake/scripts/CTestScript.cmake index 7657fc2..e525078 100755 --- a/config/cmake/scripts/CTestScript.cmake +++ b/config/cmake/scripts/CTestScript.cmake @@ -25,14 +25,11 @@ if(NOT SITE_OS_NAME) message(STATUS "Dashboard script uname output: ${osname}-${osrel}-${cpu}\n")
set(CTEST_BUILD_NAME "${osname}-${osrel}-${cpu}")
- if(USE_AUTOTOOLS)
- set(CTEST_BUILD_NAME "AT-${CTEST_BUILD_NAME}")
- endif()
if(SITE_BUILDNAME_SUFFIX)
- set(CTEST_BUILD_NAME "${CTEST_BUILD_NAME}-${SITE_BUILDNAME_SUFFIX}")
+ set(CTEST_BUILD_NAME "${SITE_BUILDNAME_SUFFIX}-${CTEST_BUILD_NAME}")
endif()
set(BUILD_OPTIONS "${ADD_BUILD_OPTIONS}")
-else(NOT SITE_OS_NAME)
+else()
## machine name provided
## --------------------------
if(CMAKE_HOST_UNIX)
@@ -44,7 +41,7 @@ else(NOT SITE_OS_NAME) set(CTEST_BUILD_NAME "${CTEST_BUILD_NAME}-${SITE_BUILDNAME_SUFFIX}")
endif()
set(BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DSITE:STRING=${CTEST_SITE} -DBUILDNAME:STRING=${CTEST_BUILD_NAME}")
-endif(NOT SITE_OS_NAME)
+endif()
#-----------------------------------------------------------------------------
# MAC machines need special option
@@ -59,12 +56,12 @@ if(APPLE) if(NOT NO_MAC_FORTRAN)
# Shared fortran is not supported, build static
set(BUILD_OPTIONS "${BUILD_OPTIONS} -DBUILD_SHARED_LIBS:BOOL=OFF -DCMAKE_ANSI_CFLAGS:STRING=-fPIC")
- else(NOT NO_MAC_FORTRAN)
+ else()
set(BUILD_OPTIONS "${BUILD_OPTIONS} -DHDF5_BUILD_FORTRAN:BOOL=OFF")
- endif(NOT NO_MAC_FORTRAN)
+ endif()
set(BUILD_OPTIONS "${BUILD_OPTIONS} -DCTEST_USE_LAUNCHERS:BOOL=ON -DCMAKE_BUILD_WITH_INSTALL_RPATH:BOOL=OFF")
-endif(APPLE)
+endif()
#-----------------------------------------------------------------------------
set(NEED_REPOSITORY_CHECKOUT 0)
@@ -73,10 +70,10 @@ if(CTEST_USE_TAR_SOURCE) ## Uncompress source if tar file provided
## --------------------------
if(WIN32)
- message(STATUS "extracting... [${CMAKE_EXECUTABLE_NAME} x ${CTEST_USE_TAR_SOURCE}.zip]")
+ message(STATUS "extracting... [${CMAKE_EXECUTABLE_NAME} x ${CTEST_DASHBOARD_ROOT}\\${CTEST_USE_TAR_SOURCE}.zip]")
execute_process(COMMAND ${CMAKE_EXECUTABLE_NAME} -E tar -xvf ${CTEST_DASHBOARD_ROOT}\\${CTEST_USE_TAR_SOURCE}.zip RESULT_VARIABLE rv)
else()
- message(STATUS "extracting... [${CMAKE_EXECUTABLE_NAME} -E tar -xvf ${CTEST_USE_TAR_SOURCE}.tar]")
+ message(STATUS "extracting... [${CMAKE_EXECUTABLE_NAME} -E tar -xvf ${CTEST_DASHBOARD_ROOT}/${CTEST_USE_TAR_SOURCE}.tar]")
execute_process(COMMAND ${CMAKE_EXECUTABLE_NAME} -E tar -xvf ${CTEST_DASHBOARD_ROOT}/${CTEST_USE_TAR_SOURCE}.tar RESULT_VARIABLE rv)
endif()
@@ -88,7 +85,7 @@ if(CTEST_USE_TAR_SOURCE) file(RENAME ${CTEST_DASHBOARD_ROOT}/${CTEST_USE_TAR_SOURCE} ${CTEST_SOURCE_DIRECTORY})
set(LOCAL_SKIP_UPDATE "TRUE")
-else(CTEST_USE_TAR_SOURCE)
+else()
if(LOCAL_UPDATE)
if(CTEST_USE_GIT_SOURCE)
find_program(CTEST_GIT_COMMAND NAMES git git.cmd)
@@ -109,7 +106,7 @@ else(CTEST_USE_TAR_SOURCE) set(CTEST_GIT_options "pull")
endif()
set(CTEST_UPDATE_COMMAND "${CTEST_GIT_COMMAND}")
- else(CTEST_USE_GIT_SOURCE)
+ else()
## --------------------------
## use subversion to get source
#-----------------------------------------------------------------------------
@@ -140,9 +137,9 @@ else(CTEST_USE_TAR_SOURCE) set(CTEST_SVN_UPDATE_OPTIONS "-r ${CTEST_REPO_VERSION}")
endif()
endif()
- endif(CTEST_USE_GIT_SOURCE)
- endif(LOCAL_UPDATE)
-endif(CTEST_USE_TAR_SOURCE)
+ endif()
+ endif()
+endif()
#-----------------------------------------------------------------------------
## Clear the build directory
@@ -166,22 +163,11 @@ endif() #-----------------------------------------------------------------------------
# Send the main script as a note.
-if(USE_AUTOTOOLS)
- ## autotools builds need to use make and does not use the cacheinit.cmake file
- ## -- make command
- ## -----------------
- find_program(MAKE NAMES make)
- list(APPEND CTEST_NOTES_FILES
- "${CTEST_SCRIPT_DIRECTORY}/${CTEST_SCRIPT_NAME}"
- "${CMAKE_CURRENT_LIST_FILE}"
- )
-else()
- list(APPEND CTEST_NOTES_FILES
- "${CTEST_SCRIPT_DIRECTORY}/${CTEST_SCRIPT_NAME}"
- "${CMAKE_CURRENT_LIST_FILE}"
- "${CTEST_SOURCE_DIRECTORY}/config/cmake/cacheinit.cmake"
- )
-endif()
+list(APPEND CTEST_NOTES_FILES
+ "${CTEST_SCRIPT_DIRECTORY}/${CTEST_SCRIPT_NAME}"
+ "${CMAKE_CURRENT_LIST_FILE}"
+ "${CTEST_SOURCE_DIRECTORY}/config/cmake/cacheinit.cmake"
+)
#-----------------------------------------------------------------------------
# Check for required variables.
@@ -194,32 +180,25 @@ foreach(req if(NOT DEFINED ${req})
message(FATAL_ERROR "The containing script must set ${req}")
endif()
-endforeach(req)
+endforeach()
#-----------------------------------------------------------------------------
# Initialize the CTEST commands
#------------------------------
-if(USE_AUTOTOOLS)
- set(CTEST_CONFIGURE_COMMAND "${CTEST_SOURCE_DIRECTORY}/configure ${ADD_BUILD_OPTIONS}")
- set(CTEST_BUILD_COMMAND "${MAKE} ${CTEST_BUILD_FLAGS}")
- configure_file(${CTEST_SOURCE_DIRECTORY}/config/cmake/CTestCustom.cmake ${CTEST_BINARY_DIRECTORY}/CTestCustom.cmake)
- file(WRITE ${CTEST_BINARY_DIRECTORY}/CTestTestfile.cmake "ADD_TEST(makecheck \"${MAKE}\" \"${CTEST_BUILD_FLAGS}\" \"-i\" \"check\")")
-else(USE_AUTOTOOLS)
- if(LOCAL_MEMCHECK_TEST)
- find_program(CTEST_MEMORYCHECK_COMMAND NAMES valgrind)
- set (CTEST_CONFIGURE_COMMAND
- "${CTEST_CMAKE_COMMAND} -C \"${CTEST_SOURCE_DIRECTORY}/config/cmake/mccacheinit.cmake\" -DCMAKE_BUILD_TYPE:STRING=${CTEST_CONFIGURATION_TYPE} ${BUILD_OPTIONS} \"-G${CTEST_CMAKE_GENERATOR}\" \"${CTEST_SOURCE_DIRECTORY}\""
- )
- else()
- if(LOCAL_COVERAGE_TEST)
- find_program(CTEST_COVERAGE_COMMAND NAMES gcov)
- endif()
- set (CTEST_CONFIGURE_COMMAND
- "${CTEST_CMAKE_COMMAND} -C \"${CTEST_SOURCE_DIRECTORY}/config/cmake/cacheinit.cmake\" -DCMAKE_BUILD_TYPE:STRING=${CTEST_CONFIGURATION_TYPE} ${BUILD_OPTIONS} \"-G${CTEST_CMAKE_GENERATOR}\" \"${CTEST_SOURCE_DIRECTORY}\""
- )
+if(LOCAL_MEMCHECK_TEST)
+ find_program(CTEST_MEMORYCHECK_COMMAND NAMES valgrind)
+ set (CTEST_CONFIGURE_COMMAND
+ "${CTEST_CMAKE_COMMAND} -C \"${CTEST_SOURCE_DIRECTORY}/config/cmake/mccacheinit.cmake\" -DCMAKE_BUILD_TYPE:STRING=${CTEST_CONFIGURATION_TYPE} ${BUILD_OPTIONS} \"-G${CTEST_CMAKE_GENERATOR}\" \"${CTEST_SOURCE_DIRECTORY}\""
+ )
+else()
+ if(LOCAL_COVERAGE_TEST)
+ find_program(CTEST_COVERAGE_COMMAND NAMES gcov)
endif()
+ set (CTEST_CONFIGURE_COMMAND
+ "${CTEST_CMAKE_COMMAND} -C \"${CTEST_SOURCE_DIRECTORY}/config/cmake/cacheinit.cmake\" -DCMAKE_BUILD_TYPE:STRING=${CTEST_CONFIGURATION_TYPE} ${BUILD_OPTIONS} \"-G${CTEST_CMAKE_GENERATOR}\" \"${CTEST_SOURCE_DIRECTORY}\""
+ )
endif()
-
+
#-----------------------------------------------------------------------------
## -- set output to english
set($ENV{LC_MESSAGES} "en_EN")
diff --git a/config/cmake/scripts/HDF5config.cmake b/config/cmake/scripts/HDF5config.cmake index 8e3b7b0..580675e 100755 --- a/config/cmake/scripts/HDF5config.cmake +++ b/config/cmake/scripts/HDF5config.cmake @@ -1,7 +1,7 @@ #############################################################################################
### ${CTEST_SCRIPT_ARG} is of the form OPTION=VALUE ###
### BUILD_GENERATOR required [Unix, VS2015, VS201564, VS2013, VS201364, VS2012, VS201264] ###
-### ctest -S HDF5config.cmake,BUILD_GENERATOR=VS201264 -C Release -V -O hdf5.log ###
+### ctest -S HDF5config.cmake,BUILD_GENERATOR=VS201264 -C Release -VV -O hdf5.log ###
#############################################################################################
cmake_minimum_required(VERSION 3.2.2 FATAL_ERROR)
@@ -152,12 +152,28 @@ if(WIN32) ## Set the following to unique id your computer ##
set(CTEST_SITE "WIN7${BUILD_GENERATOR}.XXXX")
else()
+ set(CTEST_CMAKE_GENERATOR "Unix Makefiles")
## Set the following to unique id your computer ##
if(APPLE)
set(CTEST_SITE "MAC.XXXX")
else()
set(CTEST_SITE "LINUX.XXXX")
endif()
+ if(APPLE)
+ execute_process(COMMAND xcrun --find cc OUTPUT_VARIABLE XCODE_CC OUTPUT_STRIP_TRAILING_WHITESPACE)
+ execute_process(COMMAND xcrun --find c++ OUTPUT_VARIABLE XCODE_CXX OUTPUT_STRIP_TRAILING_WHITESPACE)
+ set(ENV{CC} "${XCODE_CC}")
+ set(ENV{CXX} "${XCODE_CXX}")
+ set(CTEST_USE_LAUNCHERS 1)
+ set(RR_WARNINGS_COMMON "-Wno-format-nonliteral -Wno-cast-align -Wno-unused -Wno-unused-variable -Wno-unused-function -Wno-self-assign -Wno-unused-parameter -Wno-sign-compare")
+ set(RR_WARNINGS_C "${RR_WARNINGS_COMMON} -Wno-deprecated-declarations -Wno-uninitialized")
+ set(RR_WARNINGS_CXX "${RR_WARNINGS_COMMON} -Woverloaded-virtual -Wshadow -Wwrite-strings -Wc++11-compat")
+ set(RR_FLAGS_COMMON "-g -O0 -fstack-protector-all -D_FORTIFY_SOURCE=2")
+ set(RR_FLAGS_C "${RR_FLAGS_COMMON}")
+ set(RR_FLAGS_CXX "${RR_FLAGS_COMMON}")
+ set(ENV{CFLAGS} "${RR_WARNINGS_C} ${RR_FLAGS_C}")
+ set(ENV{CXXFLAGS} "${RR_WARNINGS_CXX} ${RR_FLAGS_CXX}")
+ endif()
endif()
###################################################################
@@ -178,16 +194,14 @@ set(MODEL "Experimental") #set(LOCAL_NO_PACKAGE "TRUE")
##### Following controls source update #####
#set(LOCAL_UPDATE "TRUE")
-set(REPOSITORY_URL "http://svn.hdfgroup.uiuc.edu/hdf5/trunk")
+set(REPOSITORY_URL "https://git@bitbucket.hdfgroup.org/scm/hdffv/hdf5.git")
+set(REPOSITORY_BRANCH "develop")
+
#uncomment to use a compressed source file: *.tar on linux or mac *.zip on windows
#set(CTEST_USE_TAR_SOURCE "${CTEST_SOURCE_VERSION}")
###################################################################
###################################################################
-#### Change default configuration of options in config/cmake/cacheinit.cmake file ###
-#### format: set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DXXX:YY=ZZZZ")
-
-###################################################################
if(${STATICLIBRARIES})
set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DBUILD_SHARED_LIBS:BOOL=OFF")
######### Following describes computer ############
@@ -195,26 +209,15 @@ if(${STATICLIBRARIES}) set(SITE_BUILDNAME_SUFFIX "STATIC")
endif()
###################################################################
-
-### uncomment/comment and change the following lines for other configuration options
-
-#### ext libraries ####
-### ext libs from tgz
-set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ALLOW_EXTERNAL_SUPPORT:STRING=TGZ -DTGZPATH:PATH=${CTEST_SCRIPT_DIRECTORY}")
-### ext libs from svn
-#set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ALLOW_EXTERNAL_SUPPORT:STRING=SVN")
-### ext libs on system
-#set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DZLIB_LIBRARY:FILEPATH=some_location/lib/zlib.lib -DZLIB_INCLUDE_DIR:PATH=some_location/include")
-#set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DSZIP_LIBRARY:FILEPATH=some_location/lib/szlib.lib -DSZIP_INCLUDE_DIR:PATH=some_location/include")
-### disable ext libs building
-#set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_Z_LIB_SUPPORT:BOOL=OFF")
-#set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_SZIP_SUPPORT:BOOL=OFF")
-#set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_SZIP_ENCODING:BOOL=OFF")
#### fortran ####
if(${FORTRANLIBRARIES})
set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_FORTRAN:BOOL=ON")
+ ### enable Fortran 2003 depends on HDF5_BUILD_FORTRAN
+ set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_F2003:BOOL=ON")
else()
set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_FORTRAN:BOOL=OFF")
+ ### enable Fortran 2003 depends on HDF5_BUILD_FORTRAN
+ set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_F2003:BOOL=OFF")
endif()
#### java ####
if(${JAVALIBRARIES})
@@ -223,57 +226,53 @@ else() set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_JAVA:BOOL=OFF")
endif()
-### disable test program builds
-#set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DBUILD_TESTING:BOOL=OFF")
-
-### disable packaging
-#set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_NO_PACKAGES:BOOL=ON")
-### Create install package with external libraries (szip, zlib, jpeg)
-set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_PACKAGE_EXTLIBS:BOOL=ON")
-
### change install prefix
-set(BUILD_OPTIONS "${BUILD_OPTIONS} -DCMAKE_INSTALL_PREFIX:PATH=${INSTALLDIR}")
-set(BUILD_OPTIONS "${BUILD_OPTIONS} -DCTEST_CONFIGURATION_TYPE:STRING=$ENV{CMAKE_CONFIG_TYPE}")
+set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DCMAKE_INSTALL_PREFIX:PATH=${INSTALLDIR}")
+set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DCTEST_CONFIGURATION_TYPE:STRING=$ENV{CMAKE_CONFIG_TYPE}")
###################################################################
if(WIN32)
+ set(BINFILEBASE "HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-win${SITE_OS_BITS}")
+ include(${CTEST_SCRIPT_DIRECTORY}\\HDF5options.cmake)
include(${CTEST_SCRIPT_DIRECTORY}\\CTestScript.cmake)
- if(EXISTS "${CTEST_BINARY_DIRECTORY}\\HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-win${SITE_OS_BITS}.exe")
- file(COPY "${CTEST_BINARY_DIRECTORY}\\HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-win${SITE_OS_BITS}.exe" DESTINATION ${CTEST_SCRIPT_DIRECTORY})
+ if(EXISTS "${CTEST_BINARY_DIRECTORY}\\${BINFILEBASE}.exe")
+ file(COPY "${CTEST_BINARY_DIRECTORY}\\${BINFILEBASE}.exe" DESTINATION ${CTEST_SCRIPT_DIRECTORY})
endif()
- if(EXISTS "${CTEST_BINARY_DIRECTORY}\\HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-win${SITE_OS_BITS}.msi")
- file(COPY "${CTEST_BINARY_DIRECTORY}\\HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-win${SITE_OS_BITS}.msi" DESTINATION ${CTEST_SCRIPT_DIRECTORY})
+ if(EXISTS "${CTEST_BINARY_DIRECTORY}\\${BINFILEBASE}.msi")
+ file(COPY "${CTEST_BINARY_DIRECTORY}\\${BINFILEBASE}.msi" DESTINATION ${CTEST_SCRIPT_DIRECTORY})
endif()
- if(EXISTS "${CTEST_BINARY_DIRECTORY}\\HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-win${SITE_OS_BITS}.zip")
- file(COPY "${CTEST_BINARY_DIRECTORY}\\HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-win${SITE_OS_BITS}.zip" DESTINATION ${CTEST_SCRIPT_DIRECTORY})
+ if(EXISTS "${CTEST_BINARY_DIRECTORY}\\${BINFILEBASE}.zip")
+ file(COPY "${CTEST_BINARY_DIRECTORY}\\${BINFILEBASE}.zip" DESTINATION ${CTEST_SCRIPT_DIRECTORY})
endif()
else()
+ set(BINFILEBASE "HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}")
+ include(${CTEST_SCRIPT_DIRECTORY}/HDF5options.cmake)
include(${CTEST_SCRIPT_DIRECTORY}/CTestScript.cmake)
if(APPLE)
- if(EXISTS "${CTEST_BINARY_DIRECTORY}/HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-Darwin.dmg")
- file(COPY "${CTEST_BINARY_DIRECTORY}/HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-Darwin.dmg" DESTINATION ${CTEST_SCRIPT_DIRECTORY})
+ if(EXISTS "${CTEST_BINARY_DIRECTORY}/${BINFILEBASE}-Darwin.dmg")
+ file(COPY "${CTEST_BINARY_DIRECTORY}/${BINFILEBASE}-Darwin.dmg" DESTINATION ${CTEST_SCRIPT_DIRECTORY})
endif()
- if(EXISTS "${CTEST_BINARY_DIRECTORY}/HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-Darwin.tar.gz")
- file(COPY "${CTEST_BINARY_DIRECTORY}/HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-Darwin.tar.gz" DESTINATION ${CTEST_SCRIPT_DIRECTORY})
+ if(EXISTS "${CTEST_BINARY_DIRECTORY}/${BINFILEBASE}-Darwin.tar.gz")
+ file(COPY "${CTEST_BINARY_DIRECTORY}/${BINFILEBASE}-Darwin.tar.gz" DESTINATION ${CTEST_SCRIPT_DIRECTORY})
endif()
- if(EXISTS "${CTEST_BINARY_DIRECTORY}/HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-Darwin.sh")
- file(COPY "${CTEST_BINARY_DIRECTORY}/HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-Darwin.sh" DESTINATION ${CTEST_SCRIPT_DIRECTORY})
+ if(EXISTS "${CTEST_BINARY_DIRECTORY}/${BINFILEBASE}-Darwin.sh")
+ file(COPY "${CTEST_BINARY_DIRECTORY}/${BINFILEBASE}-Darwin.sh" DESTINATION ${CTEST_SCRIPT_DIRECTORY})
endif()
else()
if(CYGWIN)
- if(EXISTS "${CTEST_BINARY_DIRECTORY}/HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-CYGWIN.sh")
- file(COPY "${CTEST_BINARY_DIRECTORY}/HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-CYGWIN.sh" DESTINATION ${CTEST_SCRIPT_DIRECTORY})
+ if(EXISTS "${CTEST_BINARY_DIRECTORY}/${BINFILEBASE}-CYGWIN.sh")
+ file(COPY "${CTEST_BINARY_DIRECTORY}/${BINFILEBASE}-CYGWIN.sh" DESTINATION ${CTEST_SCRIPT_DIRECTORY})
endif()
- if(EXISTS "${CTEST_BINARY_DIRECTORY}/HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-CYGWIN.tar.gz")
- file(COPY "${CTEST_BINARY_DIRECTORY}/HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-CYGWIN.tar.gz" DESTINATION ${CTEST_SCRIPT_DIRECTORY})
+ if(EXISTS "${CTEST_BINARY_DIRECTORY}/${BINFILEBASE}-CYGWIN.tar.gz")
+ file(COPY "${CTEST_BINARY_DIRECTORY}/${BINFILEBASE}-CYGWIN.tar.gz" DESTINATION ${CTEST_SCRIPT_DIRECTORY})
endif()
else()
- if(EXISTS "${CTEST_BINARY_DIRECTORY}/HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-Linux.sh")
- file(COPY "${CTEST_BINARY_DIRECTORY}/HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-Linux.sh" DESTINATION ${CTEST_SCRIPT_DIRECTORY})
+ if(EXISTS "${CTEST_BINARY_DIRECTORY}/${BINFILEBASE}-Linux.sh")
+ file(COPY "${CTEST_BINARY_DIRECTORY}/${BINFILEBASE}-Linux.sh" DESTINATION ${CTEST_SCRIPT_DIRECTORY})
endif()
- if(EXISTS "${CTEST_BINARY_DIRECTORY}/HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-Linux.tar.gz")
- file(COPY "${CTEST_BINARY_DIRECTORY}/HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-Linux.tar.gz" DESTINATION ${CTEST_SCRIPT_DIRECTORY})
+ if(EXISTS "${CTEST_BINARY_DIRECTORY}/${BINFILEBASE}-Linux.tar.gz")
+ file(COPY "${CTEST_BINARY_DIRECTORY}/${BINFILEBASE}-Linux.tar.gz" DESTINATION ${CTEST_SCRIPT_DIRECTORY})
endif()
endif()
endif()
diff --git a/config/cmake/scripts/HDF5options.cmake b/config/cmake/scripts/HDF5options.cmake new file mode 100755 index 0000000..8f955e7 --- /dev/null +++ b/config/cmake/scripts/HDF5options.cmake @@ -0,0 +1,33 @@ +############################################################################################# +#### Change default configuration of options in config/cmake/cacheinit.cmake file ### +#### format: set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DXXX:YY=ZZZZ") ### +############################################################################################# + +### uncomment/comment and change the following lines for other configuration options + +############################################################################################# +#### ext libraries #### +### ext libs from tgz +set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ALLOW_EXTERNAL_SUPPORT:STRING=TGZ -DTGZPATH:PATH=${CTEST_SCRIPT_DIRECTORY}") +### ext libs from git +#set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ALLOW_EXTERNAL_SUPPORT:STRING=GIT") +### ext libs on system +#set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DZLIB_LIBRARY:FILEPATH=some_location/lib/zlib.lib -DZLIB_INCLUDE_DIR:PATH=some_location/include") +#set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DSZIP_LIBRARY:FILEPATH=some_location/lib/szlib.lib -DSZIP_INCLUDE_DIR:PATH=some_location/include") +### disable ext zlib building +#set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_Z_LIB_SUPPORT:BOOL=OFF") +### disable ext szip building +#set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_SZIP_SUPPORT:BOOL=OFF") +#set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_SZIP_ENCODING:BOOL=OFF") + +############################################################################################# +### disable test program builds +#set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DBUILD_TESTING:BOOL=OFF") + +############################################################################################# +### disable packaging +#set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_NO_PACKAGES:BOOL=ON") +### Create install package with external libraries (szip, zlib, jpeg) +set(ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_PACKAGE_EXTLIBS:BOOL=ON") + +############################################################################################# diff --git a/config/cmake_ext_mod/FindMPI.cmake b/config/cmake_ext_mod/FindMPI.cmake index 1a02f82..5e8084c 100644 --- a/config/cmake_ext_mod/FindMPI.cmake +++ b/config/cmake_ext_mod/FindMPI.cmake @@ -114,9 +114,10 @@ include(GetPrerequisites) # # Start out with the generic MPI compiler names, as these are most commonly used. -set(_MPI_C_COMPILER_NAMES mpicc mpcc mpicc_r mpcc_r) +set(_MPI_C_COMPILER_NAMES mpicc mpcc mpicc_r mpcc_r mpicc.bat) set(_MPI_CXX_COMPILER_NAMES mpicxx mpiCC mpcxx mpCC mpic++ mpc++ - mpicxx_r mpiCC_r mpcxx_r mpCC_r mpic++_r mpc++_r) + mpicxx_r mpiCC_r mpcxx_r mpCC_r mpic++_r mpc++_r + mpicxx.bat) set(_MPI_Fortran_COMPILER_NAMES mpif95 mpif95_r mpf95 mpf95_r mpif90 mpif90_r mpf90 mpf90_r mpif77 mpif77_r mpf77 mpf77_r) @@ -128,9 +129,9 @@ set(_MPI_GNU_Fortran_COMPILER_NAMES mpigfortran mpgfortran mpigfortran_r mpig77 mpig77_r mpg77 mpg77_r) # Intel MPI compiler names -set(_MPI_Intel_C_COMPILER_NAMES mpiicc) -set(_MPI_Intel_CXX_COMPILER_NAMES mpiicpc mpiicxx mpiic++ mpiiCC) -set(_MPI_Intel_Fortran_COMPILER_NAMES mpiifort mpiif95 mpiif90 mpiif77) +set(_MPI_Intel_C_COMPILER_NAMES mpiicc mpiicc.bat) +set(_MPI_Intel_CXX_COMPILER_NAMES mpiicpc mpiicxx mpiic++ mpiiCC mpiicpc.bat) +set(_MPI_Intel_Fortran_COMPILER_NAMES mpiifort mpiif95 mpiif90 mpiif77 mpiifort.bat) # PGI compiler names set(_MPI_PGI_C_COMPILER_NAMES mpipgcc mppgcc) @@ -315,7 +316,7 @@ function (interrogate_mpi_compiler lang try_libs) foreach(FLAG ${MPI_ALL_COMPILE_FLAGS}) if (MPI_COMPILE_FLAGS_WORK) - string(APPEND MPI_COMPILE_FLAGS_WORK " ${FLAG}") + set(MPI_COMPILE_FLAGS_WORK "${MPI_COMPILE_FLAGS_WORK} ${FLAG}") else() set(MPI_COMPILE_FLAGS_WORK ${FLAG}) endif() @@ -326,6 +327,8 @@ function (interrogate_mpi_compiler lang try_libs) foreach(IPATH ${MPI_ALL_INCLUDE_PATHS}) string(REGEX REPLACE "^ ?-I" "" IPATH ${IPATH}) string(REPLACE "//" "/" IPATH ${IPATH}) + string(REPLACE "\"" "" IPATH ${IPATH}) + file(TO_CMAKE_PATH "${IPATH}" IPATH) list(APPEND MPI_INCLUDE_PATH_WORK ${IPATH}) endforeach() @@ -364,7 +367,7 @@ function (interrogate_mpi_compiler lang try_libs) set(MPI_LINK_FLAGS_WORK) foreach(FLAG ${MPI_ALL_LINK_FLAGS}) if (MPI_LINK_FLAGS_WORK) - string(APPEND MPI_LINK_FLAGS_WORK " ${FLAG}") + set(MPI_LINK_FLAGS_WORK "${MPI_LINK_FLAGS_WORK} ${FLAG}") else() set(MPI_LINK_FLAGS_WORK ${FLAG}) endif() @@ -386,8 +389,7 @@ function (interrogate_mpi_compiler lang try_libs) # in the showme list that can only be found in the implicit # link directories of the compiler. if (DEFINED CMAKE_${lang}_IMPLICIT_LINK_DIRECTORIES) - string(APPEND MPI_LINK_PATH - ";${CMAKE_${lang}_IMPLICIT_LINK_DIRECTORIES}") + set(MPI_LINK_PATH "${MPI_LINK_PATH};${CMAKE_${lang}_IMPLICIT_LINK_DIRECTORIES}") endif () # Determine full path names for all of the libraries that one needs @@ -466,7 +468,7 @@ function (interrogate_mpi_compiler lang try_libs) if (MPI_INCLUDE_PATH_WORK AND MPI_HEADER_PATH) list(APPEND MPI_INCLUDE_PATH_WORK ${MPI_HEADER_PATH}) endif() - + set(MPI_LIB "MPI_LIB-NOTFOUND" CACHE FILEPATH "Cleared" FORCE) find_library(MPI_LIB NAMES fmpi fmpich fmpich2 fmpich2g msmpifec msmpifmc diff --git a/config/cmake_ext_mod/runTest.cmake b/config/cmake_ext_mod/runTest.cmake index 804c80f..0a77dae 100644 --- a/config/cmake_ext_mod/runTest.cmake +++ b/config/cmake_ext_mod/runTest.cmake @@ -144,6 +144,13 @@ if (TEST_FILTER) file (WRITE ${TEST_FOLDER}/${TEST_OUTPUT} "${TEST_STREAM}") endif () +if (TEST_REF_FILTER) + #message (STATUS "TEST_REF_FILTER: ${TEST_APPEND}${TEST_REF_FILTER}") + file (READ ${TEST_FOLDER}/${TEST_REFERENCE} TEST_STREAM) + STRING(REGEX REPLACE "${TEST_REF_APPEND}" "${TEST_REF_FILTER}" TEST_STREAM "${TEST_STREAM}") + file (WRITE ${TEST_FOLDER}/${TEST_REFERENCE} "${TEST_STREAM}") +endif (TEST_REF_FILTER) + # compare output files to references unless this must be skipped if (NOT TEST_SKIP_COMPARE) if (WIN32 AND NOT MINGW) @@ -151,11 +158,22 @@ if (NOT TEST_SKIP_COMPARE) file (WRITE ${TEST_FOLDER}/${TEST_REFERENCE} "${TEST_STREAM}") endif () - # now compare the output with the reference - execute_process ( - COMMAND ${CMAKE_COMMAND} -E compare_files ${TEST_FOLDER}/${TEST_OUTPUT} ${TEST_FOLDER}/${TEST_REFERENCE} - RESULT_VARIABLE TEST_RESULT - ) + if (NOT TEST_SORT_COMPARE) + # now compare the output with the reference + execute_process ( + COMMAND ${CMAKE_COMMAND} -E compare_files ${TEST_FOLDER}/${TEST_OUTPUT} ${TEST_FOLDER}/${TEST_REFERENCE} + RESULT_VARIABLE TEST_RESULT + ) + else () + file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} v1) + file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} v2) + list (SORT v1) + list (SORT v2) + if (NOT v1 STREQUAL v2) + set(TEST_RESULT 1) + endif () + endif () + if (NOT ${TEST_RESULT} STREQUAL 0) set (TEST_RESULT 0) file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} test_act) diff --git a/fortran/testpar/CMakeLists.txt b/fortran/testpar/CMakeLists.txt index ae88ebc..2e4ebc8 100644 --- a/fortran/testpar/CMakeLists.txt +++ b/fortran/testpar/CMakeLists.txt @@ -4,7 +4,7 @@ PROJECT (HDF5_FORTRAN_TESTPAR C CXX Fortran) #----------------------------------------------------------------------------- # Setup include Directories #----------------------------------------------------------------------------- -INCLUDE_DIRECTORIES (${HDF5_F90_BINARY_DIR} ${HDF5_F90_SRC_DIR}/src) +INCLUDE_DIRECTORIES (${HDF5_F90_BINARY_DIR} ${HDF5_F90_SRC_DIR}/src ${MPI_Fortran_INCLUDE_PATH}) #----------------------------------------------------------------------------- # Add Tests @@ -22,7 +22,7 @@ target_link_libraries (parallel_test ${HDF5_F90_TEST_LIB_TARGET} ${HDF5_F90_LIB_TARGET} ${HDF5_LIB_TARGET} - ${MPI_Fortran_LIBRARIES} + ${LINK_Fortran_LIBS} ) if (WIN32 AND MSVC) target_link_libraries (parallel_test "ws2_32.lib") diff --git a/test/cache_image.c b/test/cache_image.c index c91914d..946d46b 100644 --- a/test/cache_image.c +++ b/test/cache_image.c @@ -6305,6 +6305,13 @@ cache_image_api_error_check_3(void) if ( pass ) { + if ( H5Fclose(file_id) < 0 ) { + + pass = FALSE; + failure_mssg = "H5Fclose() failed.\n"; + + } + if ( HDremove(filename) < 0 ) { pass = FALSE; diff --git a/tools/test/h5diff/CMakeTests.cmake b/tools/test/h5diff/CMakeTests.cmake index d098746..064e1dd 100644 --- a/tools/test/h5diff/CMakeTests.cmake +++ b/tools/test/h5diff/CMakeTests.cmake @@ -370,13 +370,18 @@ -D "TEST_ARGS:STRING=${ARGN}" -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/PAR/testfiles" -D "TEST_OUTPUT=${resultfile}.out" - -D "TEST_EXPECT=${resultcode}" + -D "TEST_EXPECT=0" -D "TEST_REFERENCE=${resultfile}.txt" -# -D "TEST_APPEND=EXIT CODE: [0-9]" -# -D "TEST_REF_FILTER=EXIT CODE: 0" - -D "TEST_SKIP_COMPARE=TRUE" + -D "TEST_APPEND=EXIT CODE:" + -D "TEST_REF_APPEND=EXIT CODE: [0-9]" + -D "TEST_REF_FILTER=EXIT CODE: 0" + -D "TEST_SORT_COMPARE=TRUE" -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" ) + if (NOT "${last_test}" STREQUAL "") + set_tests_properties (PH5DIFF-${resultfile} PROPERTIES DEPENDS ${last_test}) + endif () + set (last_test "PH5DIFF-${resultfile}") endif () ENDMACRO () |