diff options
155 files changed, 3425 insertions, 1668 deletions
@@ -1388,14 +1388,17 @@ ./tools/test/h5format_convert/testfiles/h5fc_v_err.ddl.err ./tools/test/h5format_convert/testfiles/h5fc_v_non_chunked.ddl ./tools/test/h5format_convert/testfiles/h5fc_d_file.ddl +./tools/test/h5format_convert/testfiles/h5fc_d_file.ddl.err +./tools/test/h5format_convert/testfiles/h5fc_d_file-d.ddl ./tools/test/h5format_convert/testfiles/h5fc_v_ndata_bt1.ddl ./tools/test/h5format_convert/testfiles/h5fc_dname.ddl -./tools/test/h5format_convert/testfiles/h5fc_nonexistdset_file.ddl +./tools/test/h5format_convert/testfiles/h5fc_dname.err +./tools/test/h5format_convert/testfiles/h5fc_nonexistfile.ddl.err +./tools/test/h5format_convert/testfiles/h5fc_nonexistdset_file.ddl.err ./tools/test/h5format_convert/testfiles/h5fc_help.ddl ./tools/test/h5format_convert/testfiles/h5fc_v_all.ddl ./tools/test/h5format_convert/testfiles/h5fc_nooption.ddl ./tools/test/h5format_convert/testfiles/h5fc_v_n_1d.ddl -./tools/test/h5format_convert/testfiles/h5fc_nonexistfile.ddl ./tools/test/h5format_convert/testfiles/h5fc_non_v3.h5 ./tools/test/h5format_convert/testfiles/h5fc_edge_v3.h5 ./tools/test/h5format_convert/testfiles/h5fc_err_level.h5 @@ -1465,6 +1468,11 @@ ./tools/test/h5ls/vds_prefix/tvds-4.ls ./tools/test/h5ls/vds_prefix/tvds-5.ls +# h5ls test error files +./tools/test/h5ls/errfiles/nosuchfile.err +./tools/test/h5ls/errfiles/textlinksrc-nodangle-1.err +./tools/test/h5ls/errfiles/tgroup-1.err + # h5copy sources ./tools/src/h5copy/Makefile.am ./tools/src/h5copy/h5copy.c @@ -1520,10 +1528,11 @@ ./tools/test/misc/testfiles/h5clear_less_after_size.ddl ./tools/test/misc/testfiles/h5clear_less_before_size.ddl ./tools/test/misc/testfiles/h5clear_missing_file.ddl +./tools/test/misc/testfiles/h5clear_missing_file.err ./tools/test/misc/testfiles/h5clear_noclose_after_size.ddl ./tools/test/misc/testfiles/h5clear_noclose_before_size.ddl -./tools/test/misc/testfiles/h5clear_no_mdc_image.ddl -./tools/test/misc/testfiles/h5clear_open_fail.ddl +./tools/test/misc/testfiles/h5clear_no_mdc_image.err +./tools/test/misc/testfiles/h5clear_open_fail.err ./tools/test/misc/testfiles/h5clear_status_noclose_after_size.ddl ./tools/test/misc/testfiles/h5clear_usage.ddl ./tools/test/misc/testfiles/h5clear_user_equal_after_size.ddl @@ -1577,10 +1586,6 @@ ./tools/test/h5stat/testh5stat.sh.in ./tools/test/h5stat/testfiles/h5stat_dims1.ddl ./tools/test/h5stat/testfiles/h5stat_dims2.ddl -./tools/test/h5stat/testfiles/h5stat_err1_dims.ddl -./tools/test/h5stat/testfiles/h5stat_err1_links.ddl -./tools/test/h5stat/testfiles/h5stat_err1_numattrs.ddl -./tools/test/h5stat/testfiles/h5stat_err2_numattrs.ddl ./tools/test/h5stat/testfiles/h5stat_err_old_fill.h5 ./tools/test/h5stat/testfiles/h5stat_err_old_fill.ddl ./tools/test/h5stat/testfiles/h5stat_err_old_layout.h5 @@ -1618,6 +1623,15 @@ ./tools/test/h5stat/testfiles/h5stat_threshold.h5 ./tools/test/h5stat/testfiles/h5stat_tsohm.ddl ./tools/test/h5stat/testfiles/h5stat_tsohm.h5 +./tools/test/h5stat/testfiles/h5stat_err_refcount.err +./tools/test/h5stat/testfiles/h5stat_err_old_layout.err +./tools/test/h5stat/testfiles/h5stat_err_old_fill.err +./tools/test/h5stat/testfiles/h5stat_err1_dims.err +./tools/test/h5stat/testfiles/h5stat_err1_links.err +./tools/test/h5stat/testfiles/h5stat_err1_numattrs.err +./tools/test/h5stat/testfiles/h5stat_err2_numattrs.err +./tools/test/h5stat/testfiles/h5stat_notexist.err +./tools/test/h5stat/testfiles/h5stat_nofile.err # h5dump test files ./tools/testfiles/charsets.h5 @@ -2279,7 +2293,6 @@ ./tools/test/h5diff/testfiles/h5diff_600.txt ./tools/test/h5diff/testfiles/h5diff_601.txt ./tools/test/h5diff/testfiles/h5diff_601_ERR.err -./tools/test/h5diff/testfiles/h5diff_601_ERR.txt ./tools/test/h5diff/testfiles/h5diff_603.txt ./tools/test/h5diff/testfiles/h5diff_604.txt ./tools/test/h5diff/testfiles/h5diff_605.txt @@ -2386,21 +2399,12 @@ ./tools/test/h5diff/testfiles/h5diff_452.txt ./tools/test/h5diff/testfiles/h5diff_453.txt ./tools/test/h5diff/testfiles/h5diff_454.txt -./tools/test/h5diff/testfiles/h5diff_454_ERR.err -./tools/test/h5diff/testfiles/h5diff_454_ERR.txt +./tools/test/h5diff/testfiles/dangling_link.err ./tools/test/h5diff/testfiles/h5diff_455.txt -./tools/test/h5diff/testfiles/h5diff_455_ERR.err -./tools/test/h5diff/testfiles/h5diff_455_ERR.txt ./tools/test/h5diff/testfiles/h5diff_456.txt ./tools/test/h5diff/testfiles/h5diff_457.txt -./tools/test/h5diff/testfiles/h5diff_457_ERR.err -./tools/test/h5diff/testfiles/h5diff_457_ERR.txt ./tools/test/h5diff/testfiles/h5diff_458.txt -./tools/test/h5diff/testfiles/h5diff_458_ERR.err -./tools/test/h5diff/testfiles/h5diff_458_ERR.txt ./tools/test/h5diff/testfiles/h5diff_459.txt -./tools/test/h5diff/testfiles/h5diff_459_ERR.err -./tools/test/h5diff/testfiles/h5diff_459_ERR.txt ./tools/test/h5diff/testfiles/h5diff_465.txt ./tools/test/h5diff/testfiles/h5diff_466.txt ./tools/test/h5diff/testfiles/h5diff_467.txt @@ -2490,6 +2494,7 @@ ./tools/test/h5diff/testfiles/tudfilter.h5 ./tools/test/h5diff/testfiles/tudfilter2.h5 ./tools/test/h5diff/testfiles/h5diff_ud.txt +./tools/test/h5diff/testfiles/h5diff_udfail.err ./tools/test/h5diff/testfiles/h5diff_udfail.txt ./tools/test/h5diff/testfiles/diff_strings1.h5 ./tools/test/h5diff/testfiles/diff_strings2.h5 @@ -2590,6 +2595,7 @@ ./tools/test/h5copy/testfiles/h5copy_extlinks_src.h5 ./tools/test/h5copy/testfiles/h5copy_extlinks_trg.h5 ./tools/test/h5copy/testfiles/h5copy_extlinks_src.out.ls +./tools/test/h5copy/testfiles/h5copy_misc1.err ./tools/test/h5copy/testfiles/h5copy_misc1.out ./tools/test/h5copy/testfiles/h5copytst_new.h5 ./tools/test/h5copy/testfiles/h5copytst_new.out.ls @@ -2758,16 +2764,17 @@ # expected test output from testing h5watch # -./hl/tools/testfiles/w-err-cmpd1.ddl -./hl/tools/testfiles/w-err-cmpd2.ddl -./hl/tools/testfiles/w-err-cmpd3.ddl -./hl/tools/testfiles/w-err-cmpd4.ddl -./hl/tools/testfiles/w-err-cmpd5.ddl -./hl/tools/testfiles/w-err-dset1.ddl -./hl/tools/testfiles/w-err-dset2.ddl -./hl/tools/testfiles/w-err-dset-nomax.ddl -./hl/tools/testfiles/w-err-dset-none.ddl -./hl/tools/testfiles/w-err-file.ddl +./hl/tools/testfiles/w-err-std.ddl +./hl/tools/testfiles/w-err-cmpd1.err +./hl/tools/testfiles/w-err-cmpd2.err +./hl/tools/testfiles/w-err-cmpd3.err +./hl/tools/testfiles/w-err-cmpd4.err +./hl/tools/testfiles/w-err-cmpd5.err +./hl/tools/testfiles/w-err-dset1.err +./hl/tools/testfiles/w-err-dset2.err +./hl/tools/testfiles/w-err-dset-nomax.err +./hl/tools/testfiles/w-err-dset-none.err +./hl/tools/testfiles/w-err-file.err ./hl/tools/testfiles/w-err-poll0.ddl ./hl/tools/testfiles/w-err-poll.ddl ./hl/tools/testfiles/w-err-width.ddl diff --git a/config/cmake/jrunTest.cmake b/config/cmake/jrunTest.cmake index b66f3a8..43aef22 100644 --- a/config/cmake/jrunTest.cmake +++ b/config/cmake/jrunTest.cmake @@ -32,9 +32,6 @@ endif () if (NOT TEST_CLASSPATH) message (STATUS "Require TEST_CLASSPATH to be defined") endif () -if (NOT TEST_REFERENCE) - message (FATAL_ERROR "Require TEST_REFERENCE to be defined") -endif () if (EXISTS ${TEST_FOLDER}/${TEST_OUTPUT}) file (REMOVE ${TEST_FOLDER}/${TEST_OUTPUT}) @@ -44,14 +41,6 @@ if (EXISTS ${TEST_FOLDER}/${TEST_OUTPUT}.err) file (REMOVE ${TEST_FOLDER}/${TEST_OUTPUT}.err) endif () -# if there is not an error reference file add the error output to the stdout file -if (NOT TEST_ERRREF) - if (NOT SKIP_APPEND) - # append error file since skip was not defined - set (ERROR_APPEND 1) - endif () -endif () - if (NOT TEST_LOG_LEVEL) set (LOG_LEVEL "info") else () @@ -131,52 +120,54 @@ message (STATUS "COMMAND Error: ${TEST_ERROR}") # compare output files to references unless this must be skipped if (NOT TEST_SKIP_COMPARE) - if (WIN32 AND NOT MINGW) - file (READ ${TEST_FOLDER}/${TEST_REFERENCE} TEST_STREAM) - file (WRITE ${TEST_FOLDER}/${TEST_REFERENCE} "${TEST_STREAM}") - endif () + if (EXISTS ${TEST_FOLDER}/${TEST_REFERENCE}) + if (WIN32 AND NOT MINGW) + file (READ ${TEST_FOLDER}/${TEST_REFERENCE} TEST_STREAM) + file (WRITE ${TEST_FOLDER}/${TEST_REFERENCE} "${TEST_STREAM}") + endif () - # now compare the output with the reference - execute_process ( - COMMAND ${CMAKE_COMMAND} -E compare_files ${TEST_FOLDER}/${TEST_OUTPUT} ${TEST_FOLDER}/${TEST_REFERENCE} - RESULT_VARIABLE TEST_RESULT - ) - if (NOT "${TEST_RESULT}" STREQUAL "0") - set (TEST_RESULT 0) - file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} test_act) - list (LENGTH test_act len_act) - file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} test_ref) - list (LENGTH test_ref len_ref) - if (NOT "${len_act}" STREQUAL "0" AND NOT "${len_ref}" STREQUAL "0") - math (EXPR _FP_LEN "${len_ref} - 1") - foreach (line RANGE 0 ${_FP_LEN}) - list (GET test_act ${line} str_act) - list (GET test_ref ${line} str_ref) - if (NOT "${str_act}" STREQUAL "${str_ref}") - if (NOT "${str_act}" STREQUAL "") - set (TEST_RESULT 1) - message ("line = ${line}\n***ACTUAL: ${str_act}\n****REFER: ${str_ref}\n") + # now compare the output with the reference + execute_process ( + COMMAND ${CMAKE_COMMAND} -E compare_files ${TEST_FOLDER}/${TEST_OUTPUT} ${TEST_FOLDER}/${TEST_REFERENCE} + RESULT_VARIABLE TEST_RESULT + ) + if (NOT "${TEST_RESULT}" STREQUAL "0") + set (TEST_RESULT 0) + file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} test_act) + list (LENGTH test_act len_act) + file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} test_ref) + list (LENGTH test_ref len_ref) + if (NOT "${len_act}" STREQUAL "0" AND NOT "${len_ref}" STREQUAL "0") + math (EXPR _FP_LEN "${len_ref} - 1") + foreach (line RANGE 0 ${_FP_LEN}) + list (GET test_act ${line} str_act) + list (GET test_ref ${line} str_ref) + if (NOT "${str_act}" STREQUAL "${str_ref}") + if (NOT "${str_act}" STREQUAL "") + set (TEST_RESULT 1) + message ("line = ${line}\n***ACTUAL: ${str_act}\n****REFER: ${str_ref}\n") + endif () endif () + endforeach () + else () + if ("${len_act}" STREQUAL "0") + message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_OUTPUT} is empty") + endif () + if ("${len_ref}" STREQUAL "0") + message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_REFERENCE} is empty") endif () - endforeach () - else () - if ("${len_act}" STREQUAL "0") - message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_OUTPUT} is empty") endif () - if ("${len_ref}" STREQUAL "0") - message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_REFERENCE} is empty") + if (NOT "${len_act}" STREQUAL "${len_ref}") + set (TEST_RESULT 1) endif () endif () - if (NOT "${len_act}" STREQUAL "${len_ref}") - set (TEST_RESULT 1) - endif () - endif () - message (STATUS "COMPARE Result: ${TEST_RESULT}") + message (STATUS "COMPARE Result: ${TEST_RESULT}") - # again, if return value is !=0 scream and shout - if (NOT "${TEST_RESULT}" STREQUAL "0") - message (FATAL_ERROR "Failed: The output of ${TEST_OUTPUT} did not match ${TEST_REFERENCE}") + # again, if return value is !=0 scream and shout + if (NOT "${TEST_RESULT}" STREQUAL "0") + message (FATAL_ERROR "Failed: The output of ${TEST_OUTPUT} did not match ${TEST_REFERENCE}") + endif () endif () # now compare the .err file with the error reference, if supplied @@ -217,7 +208,7 @@ if (NOT TEST_SKIP_COMPARE) if ("${len_ref}" STREQUAL "0") message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_ERRREF} is empty") endif () - endif() + endif () if (NOT "${len_act}" STREQUAL "${len_ref}") set (TEST_RESULT 1) endif () @@ -226,7 +217,7 @@ if (NOT TEST_SKIP_COMPARE) message (STATUS "COMPARE Result: ${TEST_RESULT}") # again, if return value is !=0 scream and shout - if (NOT ${TEST_RESULT} STREQUAL 0) + if (NOT "${TEST_RESULT}" STREQUAL "0") message (FATAL_ERROR "Failed: The error output of ${TEST_OUTPUT}.err did not match ${TEST_ERRREF}") endif () endif () diff --git a/config/cmake/scripts/HDF5options.cmake b/config/cmake/scripts/HDF5options.cmake index 6d1a57a..d4cc996 100755 --- a/config/cmake/scripts/HDF5options.cmake +++ b/config/cmake/scripts/HDF5options.cmake @@ -58,12 +58,13 @@ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ALLOW_EXTERNAL_SUPPORT:STRIN ### ext libs from git #set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ALLOW_EXTERNAL_SUPPORT:STRING=GIT") ### ext libs on system +#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ALLOW_EXTERNAL_SUPPORT:STRING=NO") #set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DZLIB_LIBRARY:FILEPATH=some_location/lib/zlib.lib -DZLIB_INCLUDE_DIR:PATH=some_location/include") #set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DSZIP_LIBRARY:FILEPATH=some_location/lib/szlib.lib -DSZIP_INCLUDE_DIR:PATH=some_location/include") -### disable ext zlib building +### disable using ext zlib #set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_Z_LIB_SUPPORT:BOOL=OFF") -### disable ext szip building +### disable using ext szip #set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_SZIP_SUPPORT:BOOL=OFF") #set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_SZIP_ENCODING:BOOL=OFF") diff --git a/config/cmake/vfdTest.cmake b/config/cmake/vfdTest.cmake index 66a97c0..95a4c40 100644 --- a/config/cmake/vfdTest.cmake +++ b/config/cmake/vfdTest.cmake @@ -32,9 +32,9 @@ if (EXISTS ${TEST_FOLDER}/${TEST_OUTPUT}.err) endif () # if there is not an error reference file add the error output to the stdout file -if (NOT TEST_ERRREF) - set (ERROR_APPEND 1) -endif () +#if (NOT TEST_ERRREF) +# set (ERROR_APPEND 1) +#endif () message (STATUS "USING ${TEST_VFD} ON COMMAND: ${TEST_PROGRAM} ${TEST_ARGS}") diff --git a/config/cmake_ext_mod/runTest.cmake b/config/cmake_ext_mod/runTest.cmake index 5569a73..0bc2db0 100644 --- a/config/cmake_ext_mod/runTest.cmake +++ b/config/cmake_ext_mod/runTest.cmake @@ -26,9 +26,6 @@ endif () if (NOT TEST_EXPECT) message (STATUS "Require TEST_EXPECT to be defined") endif () -if (NOT TEST_SKIP_COMPARE AND NOT TEST_REFERENCE) - message (FATAL_ERROR "Require TEST_REFERENCE to be defined") -endif () if (EXISTS ${TEST_FOLDER}/${TEST_OUTPUT}) file (REMOVE ${TEST_FOLDER}/${TEST_OUTPUT}) @@ -38,11 +35,6 @@ if (EXISTS ${TEST_FOLDER}/${TEST_OUTPUT}.err) file (REMOVE ${TEST_FOLDER}/${TEST_OUTPUT}.err) endif () -# if there is not an error reference file add the error output to the stdout file -if (NOT TEST_ERRREF) - set (ERROR_APPEND 1) -endif () - message (STATUS "COMMAND: ${TEST_PROGRAM} ${TEST_ARGS}") if (TEST_LIBRARY_DIRECTORY) @@ -96,9 +88,19 @@ endif () message (STATUS "COMMAND Result: ${TEST_RESULT}") # if the .err file exists and ERRROR_APPEND is enabled -if (ERROR_APPEND AND EXISTS ${TEST_FOLDER}/${TEST_OUTPUT}.err) +if (EXISTS ${TEST_FOLDER}/${TEST_OUTPUT}.err) file (READ ${TEST_FOLDER}/${TEST_OUTPUT}.err TEST_STREAM) - file (APPEND ${TEST_FOLDER}/${TEST_OUTPUT} "${TEST_STREAM}") + if (TEST_MASK_FILE) + STRING(REGEX REPLACE "CurrentDir is [^\n]+\n" "CurrentDir is (dir name)\n" TEST_STREAM "${TEST_STREAM}") + endif () + + if (NOT ERROR_APPEND) + # append error output to the stdout output file + file (WRITE ${TEST_FOLDER}/${TEST_OUTPUT}.err "${TEST_STREAM}") + else () + # write back to original .err file + file (APPEND ${TEST_FOLDER}/${TEST_OUTPUT} "${TEST_STREAM}") + endif () endif () # append the test result status with a predefined text @@ -142,6 +144,7 @@ if (TEST_MASK_ERROR) # the error stack remains in the .err file file (READ ${TEST_FOLDER}/${TEST_OUTPUT}.err TEST_STREAM) endif () + string (REGEX REPLACE "^.*_pmi_alps[^\n]+\n" "" TEST_STREAM "${TEST_STREAM}") string (REGEX REPLACE "thread [0-9]*:" "thread (IDs):" TEST_STREAM "${TEST_STREAM}") string (REGEX REPLACE ": ([^\n]*)[.]c " ": (file name) " TEST_STREAM "${TEST_STREAM}") string (REGEX REPLACE " line [0-9]*" " line (number)" TEST_STREAM "${TEST_STREAM}") @@ -173,63 +176,65 @@ endif () # compare output files to references unless this must be skipped if (NOT TEST_SKIP_COMPARE) - if (WIN32 AND NOT MINGW) - file (READ ${TEST_FOLDER}/${TEST_REFERENCE} TEST_STREAM) - file (WRITE ${TEST_FOLDER}/${TEST_REFERENCE} "${TEST_STREAM}") - endif () + if (EXISTS ${TEST_FOLDER}/${TEST_REFERENCE}) + if (WIN32 AND NOT MINGW) + file (READ ${TEST_FOLDER}/${TEST_REFERENCE} TEST_STREAM) + file (WRITE ${TEST_FOLDER}/${TEST_REFERENCE} "${TEST_STREAM}") + endif () - if (NOT TEST_SORT_COMPARE) - # now compare the output with the reference - execute_process ( - COMMAND ${CMAKE_COMMAND} -E compare_files ${TEST_FOLDER}/${TEST_OUTPUT} ${TEST_FOLDER}/${TEST_REFERENCE} - RESULT_VARIABLE TEST_RESULT - ) - else () - file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} v1) - file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} v2) - list (SORT v1) - list (SORT v2) - if (NOT v1 STREQUAL v2) - set(TEST_RESULT 1) + if (NOT TEST_SORT_COMPARE) + # now compare the output with the reference + execute_process ( + COMMAND ${CMAKE_COMMAND} -E compare_files ${TEST_FOLDER}/${TEST_OUTPUT} ${TEST_FOLDER}/${TEST_REFERENCE} + RESULT_VARIABLE TEST_RESULT + ) + else () + file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} v1) + file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} v2) + list (SORT v1) + list (SORT v2) + if (NOT v1 STREQUAL v2) + set(TEST_RESULT 1) + endif () endif () - endif () - if (NOT "${TEST_RESULT}" STREQUAL "0") - set (TEST_RESULT 0) - file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} test_act) - list (LENGTH test_act len_act) - file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} test_ref) - list (LENGTH test_ref len_ref) - if (NOT "${len_act}" STREQUAL "0" AND NOT "${len_ref}" STREQUAL "0") - math (EXPR _FP_LEN "${len_ref} - 1") - foreach (line RANGE 0 ${_FP_LEN}) - list (GET test_act ${line} str_act) - list (GET test_ref ${line} str_ref) - if (NOT "${str_act}" STREQUAL "${str_ref}") - if (NOT "${str_act}" STREQUAL "") - set (TEST_RESULT 1) - message ("line = ${line}\n***ACTUAL: ${str_act}\n****REFER: ${str_ref}\n") + if (NOT "${TEST_RESULT}" STREQUAL "0") + set (TEST_RESULT 0) + file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} test_act) + list (LENGTH test_act len_act) + file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} test_ref) + list (LENGTH test_ref len_ref) + if (NOT "${len_act}" STREQUAL "0" AND NOT "${len_ref}" STREQUAL "0") + math (EXPR _FP_LEN "${len_ref} - 1") + foreach (line RANGE 0 ${_FP_LEN}) + list (GET test_act ${line} str_act) + list (GET test_ref ${line} str_ref) + if (NOT "${str_act}" STREQUAL "${str_ref}") + if (NOT "${str_act}" STREQUAL "") + set (TEST_RESULT 1) + message ("line = ${line}\n***ACTUAL: ${str_act}\n****REFER: ${str_ref}\n") + endif () endif () + endforeach () + else () + if ("${len_act}" STREQUAL "0") + message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_OUTPUT} is empty") + endif () + if ("${len_ref}" STREQUAL "0") + message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_REFERENCE} is empty") endif () - endforeach () - else () - if ("${len_act}" STREQUAL "0") - message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_OUTPUT} is empty") endif () - if ("${len_ref}" STREQUAL "0") - message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_REFERENCE} is empty") + if (NOT "${len_act}" STREQUAL "${len_ref}") + set (TEST_RESULT 1) endif () endif () - if (NOT "${len_act}" STREQUAL "${len_ref}") - set (TEST_RESULT 1) - endif () - endif () - message (STATUS "COMPARE Result: ${TEST_RESULT}") + message (STATUS "COMPARE Result: ${TEST_RESULT}") - # again, if return value is !=0 scream and shout - if (NOT "${TEST_RESULT}" STREQUAL "0") - message (FATAL_ERROR "Failed: The output of ${TEST_OUTPUT} did not match ${TEST_REFERENCE}") + # again, if return value is !=0 scream and shout + if (NOT "${TEST_RESULT}" STREQUAL "0") + message (FATAL_ERROR "Failed: The output of ${TEST_OUTPUT} did not match ${TEST_REFERENCE}") + endif () endif () # now compare the .err file with the error reference, if supplied @@ -260,7 +265,7 @@ if (NOT TEST_SKIP_COMPARE) if (NOT "${str_act}" STREQUAL "") set (TEST_RESULT 1) message ("line = ${line}\n***ACTUAL: ${str_act}\n****REFER: ${str_ref}\n") - endif () + endif () endif () endforeach () else () @@ -285,5 +290,27 @@ if (NOT TEST_SKIP_COMPARE) endif () endif () +if (TEST_GREP_COMPARE) + # now grep the output with the reference + file (READ ${TEST_FOLDER}/${TEST_OUTPUT} TEST_STREAM) + + # TEST_REFERENCE should always be matched + string (REGEX MATCH "${TEST_REFERENCE}" TEST_MATCH ${TEST_STREAM}) + string (COMPARE EQUAL "${TEST_REFERENCE}" "${TEST_MATCH}" TEST_RESULT) + if ("${TEST_RESULT}" STREQUAL "0") + message (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did not contain ${TEST_REFERENCE}") + endif () + + string (REGEX MATCH "${TEST_FILTER}" TEST_MATCH ${TEST_STREAM}) + if ("${TEST_EXPECT}" STREQUAL "1") + # TEST_EXPECT (1) interperts TEST_FILTER as NOT to match + string (LENGTH "${TEST_MATCH}" TEST_RESULT) + if (NOT "${TEST_RESULT}" STREQUAL "0") + message (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did contain ${TEST_FILTER}") + endif () + endif () +endif () + # everything went fine... -message ("Passed: The output of ${TEST_PROGRAM} matches ${TEST_REFERENCE}") +message ("${TEST_PROGRAM} Passed") + diff --git a/hl/tools/h5watch/CMakeTests.cmake b/hl/tools/h5watch/CMakeTests.cmake index 0b7b4d4..13d5e47 100644 --- a/hl/tools/h5watch/CMakeTests.cmake +++ b/hl/tools/h5watch/CMakeTests.cmake @@ -18,16 +18,16 @@ set (H5WATCH_TEST_FILES w-help1.ddl - w-err-cmpd1.ddl - w-err-cmpd2.ddl - w-err-cmpd3.ddl - w-err-cmpd4.ddl - w-err-cmpd5.ddl - w-err-dset1.ddl - w-err-dset2.ddl - w-err-dset-nomax.ddl - w-err-dset-none.ddl - w-err-file.ddl + w-err-cmpd1.err + w-err-cmpd2.err + w-err-cmpd3.err + w-err-cmpd4.err + w-err-cmpd5.err + w-err-dset1.err + w-err-dset2.err + w-err-dset-nomax.err + w-err-dset-none.err + w-err-file.err w-err-poll.ddl w-err-poll0.ddl w-err-width.ddl @@ -86,6 +86,25 @@ add_custom_target(H5WATCH_files ALL COMMENT "Copying files needed by H5WATCH tes endif () endmacro () + macro (ADD_H5_ERR_TEST resultfile resultcode) + if (NOT HDF5_ENABLE_USING_MEMCHECKER) + add_test ( + NAME H5WATCH_ARGS-h5watch-${resultfile} + COMMAND "${CMAKE_COMMAND}" + -D "TEST_PROGRAM=$<TARGET_FILE:h5watch>" + -D "TEST_ARGS:STRING=${ARGN}" + -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles" + -D "TEST_OUTPUT=${resultfile}.out" + -D "TEST_EXPECT=${resultcode}" + -D "TEST_REFERENCE=${resultfile}.mty" + -D "TEST_ERRREF=${resultfile}.err" + -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" + ) + set_tests_properties (H5WATCH_ARGS-h5watch-${resultfile} PROPERTIES DEPENDS ${last_test}) + set (last_test "H5WATCH_ARGS-h5watch-${resultfile}") + endif () + endmacro () + macro (ADD_H5_WATCH resultfile resultcode) if (NOT HDF5_ENABLE_USING_MEMCHECKER) add_test ( @@ -162,20 +181,20 @@ if (NOT SWMR_INCOMPAT) ADD_H5_TEST (w-help1 0 --help) # # Tests on expected failures - ADD_H5_TEST (w-err-dset1 1 WATCH.h5) - ADD_H5_TEST (w-err-dset2 1 WATCH.h5/group/DSET_CMPD) - ADD_H5_TEST (w-err-dset-none 1 WATCH.h5/DSET_NONE) - ADD_H5_TEST (w-err-dset-nomax 1 WATCH.h5/DSET_NOMAX) - ADD_H5_TEST (w-err-file 1 ../WATCH.h5/DSET_CMPD) + ADD_H5_ERR_TEST (w-err-dset1 1 WATCH.h5) + ADD_H5_ERR_TEST (w-err-dset2 1 WATCH.h5/group/DSET_CMPD) + ADD_H5_ERR_TEST (w-err-dset-none 1 WATCH.h5/DSET_NONE) + ADD_H5_ERR_TEST (w-err-dset-nomax 1 WATCH.h5/DSET_NOMAX) + ADD_H5_ERR_TEST (w-err-file 1 ../WATCH.h5/DSET_CMPD) ADD_H5_TEST (w-err-width 1 --width=-8 WATCH.h5/DSET_ONE) ADD_H5_TEST (w-err-poll 1 --polling=-8 WATCH.h5/DSET_ONE) ADD_H5_TEST (w-err-poll0 1 --polling=0 WATCH.h5/DSET_ONE) # # Tests on invalid field names via --fields option for a compound typed dataset: DSET_CMPD - ADD_H5_TEST (w-err-cmpd1 1 --fields=fieldx WATCH.h5/DSET_CMPD) - ADD_H5_TEST (w-err-cmpd2 1 --fields=field1,field2. WATCH.h5/DSET_CMPD) - ADD_H5_TEST (w-err-cmpd3 1 --fields=field1,field2, WATCH.h5/DSET_CMPD) - ADD_H5_TEST (w-err-cmpd4 1 --fields=field1,field2.b.k WATCH.h5/DSET_CMPD) - ADD_H5_TEST (w-err-cmpd5 1 --fields=field1 --fields=field2.b.k WATCH.h5/DSET_CMPD) + ADD_H5_ERR_TEST (w-err-cmpd1 1 --fields=fieldx WATCH.h5/DSET_CMPD) + ADD_H5_ERR_TEST (w-err-cmpd2 1 --fields=field1,field2. WATCH.h5/DSET_CMPD) + ADD_H5_ERR_TEST (w-err-cmpd3 1 --fields=field1,field2, WATCH.h5/DSET_CMPD) + ADD_H5_ERR_TEST (w-err-cmpd4 1 --fields=field1,field2.b.k WATCH.h5/DSET_CMPD) + ADD_H5_ERR_TEST (w-err-cmpd5 1 --fields=field1 --fields=field2.b.k WATCH.h5/DSET_CMPD) # endif () diff --git a/hl/tools/h5watch/testh5watch.sh.in b/hl/tools/h5watch/testh5watch.sh.in index 3f8f5ae..d31bcc3 100644 --- a/hl/tools/h5watch/testh5watch.sh.in +++ b/hl/tools/h5watch/testh5watch.sh.in @@ -32,19 +32,19 @@ fi #echo #exit 0 -H5WATCH=h5watch # The tool name -H5WATCH_BIN=`pwd`/$H5WATCH # The path of H5WATCH -EXTEND_DSET=extend_dset # Routine to extend the dataset when watching -EXTEND_BIN=`pwd`/$EXTEND_DSET # The path of EXTEND_DSET +H5WATCH=h5watch # The tool name +H5WATCH_BIN=`pwd`/$H5WATCH # The path of H5WATCH +EXTEND_DSET=extend_dset # Routine to extend the dataset when watching +EXTEND_BIN=`pwd`/$EXTEND_DSET # The path of EXTEND_DSET # EXIT_SUCCESS=0 EXIT_FAILURE=1 # -GEN_TEST=h5watchgentest # Generate HDF5 file with various datasets -GEN_TEST_BIN=`pwd`/$GEN_TEST # Path of the binary GEN_TEST +GEN_TEST=h5watchgentest # Generate HDF5 file with various datasets +GEN_TEST_BIN=`pwd`/$GEN_TEST # Path of the binary GEN_TEST WATCHFILE=`pwd`/WATCH.h5 # The HDF5 file generated to test h5watch TESTFILE=TEST.h5 # The temporary file (a copy of WATCH.h5) used by tests -TRY_MAX=30 # Try running the test again +TRY_MAX=30 # Try running the test again # # These 3 defines should be the same as the defines in ./extend_dset.c WRITER_MESSAGE=writer_message # The message file created by the "extend" process @@ -53,7 +53,7 @@ MESSAGE_TIMEOUT=300 # Message timeout length in secs # CMP='cmp -s' DIFF='diff -c' -NLINES=20 # Max. lines of output to display if test fails +NLINES=20 # Max. lines of output to display if test fails # # Mac OS: just to make sure echo "backslash backslash" behaves properly if test `uname -s` = 'Darwin'; then @@ -83,9 +83,9 @@ TESTING() { # Overall algorithm: # # Run a test and print PASSED or FAILED -# If a test did not return with the expected return code, +# If a test did not return with the expected return code, # increment the `nerrors' global variable and (if $verbose is set) display up to $NLINES -# lines of the actual output from the test. +# lines of the actual output from the test. # If the test did return the expected code, # compare the actual output with the expected output; # If the outputs are the same, print PASSED, @@ -137,7 +137,54 @@ TOOLTEST() { # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err + rm -f $actual $actual_err + fi +} +# +# TOOLTEST_ERR(): +# same as toolset only compare error file +# +# Arguments: +# +# $1 -- expected output +# $2 -- expected return code +# $3 and on -- arguments for h5watch +TOOLTEST_ERR() { + expect="$srcdir/../testfiles/$1" + expect_err="$srcdir/../testfiles/`basename $1 .ddl`.err" + actual="../testfiles/`basename $1 .ddl`.out" + actual_err="../testfiles/`basename $1 .ddl`.out.err" + shift + retvalexpect=$1 + shift + # Run test. + TESTING $H5WATCH $@ + ( + $RUNSERIAL $H5WATCH_BIN "$@" + ) > $actual 2>$actual_err + exitcode=$? + if [ $exitcode -ne $retvalexpect ]; then + $ECHO "*FAILED*" + nerrors="`expr $nerrors + 1`" + if [ yes = "$verbose" ]; then + $ECHO "test returned with exit code $exitcode" + $ECHO "test output: (up to $NLINES lines)" + head -$NLINES $actual + $ECHO "***end of test output***" + $ECHO "" + fi + elif $CMP $expect_err $actual_err; then + $ECHO " PASSED" + else + $ECHO "*FAILED*" + $ECHO " Expected result differs from actual result" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect_err $actual_err |sed 's/^/ /' + fi + + # Clean up output file + if test -z "$HDF5_NOCLEANUP"; then + rm -f $actual $actual_err fi } @@ -176,15 +223,15 @@ do # Wait for message from "extend_dset" process to start h5watch-- # To wait for the writer message file or till the maximum # of seconds is reached # This performs similar function as the routine h5_wait_message() in test/h5test.c - mexist=0 # Indicate whether the message file is found - t0=`date +%s` # Get current time in seconds - difft=0 # Initialize the time difference - while [ $difft -lt $MESSAGE_TIMEOUT ] ; # Loop till message times out + mexist=0 # Indicate whether the message file is found + t0=`date +%s` # Get current time in seconds + difft=0 # Initialize the time difference + while [ $difft -lt $MESSAGE_TIMEOUT ] ; # Loop till message times out do - t1=`date +%s` # Get current time in seconds - difft=`expr $t1 - $t0` # Calculate the time difference + t1=`date +%s` # Get current time in seconds + difft=`expr $t1 - $t0` # Calculate the time difference if [ -e $WRITER_MESSAGE ]; then # If message file is found: - mexist=1 # indicate the message file is found + mexist=1 # indicate the message file is found rm $WRITER_MESSAGE # remove the message file break # get out of the while loop fi @@ -211,8 +258,8 @@ do wait $extend_pid # Wait for "extend" process to complete extend_exit=$? # Collect "extend" process' exit code sleep 1 # Sleep to make sure output is flushed - kill $watch_pid # Kill h5watch - wait $watch_pid # Wait for "h5watch" process to complete + kill $watch_pid # Kill h5watch + wait $watch_pid # Wait for "h5watch" process to complete # if [ $extend_exit -ne 0 ]; then # Error returned from "extend" process $ECHO "*FAILED*" @@ -265,7 +312,7 @@ done; # DSET_ONE: one-dimensional dataset # # DSET_TWO: two-dimensional dataset # # DSET_CMPD: one-dimensional dataset with compound type # -# DSET_CMPD_ESC: one-dimensional dataset with compound type & escape/separator characters # +# DSET_CMPD_ESC: one-dimensional dataset with compound type & escape/separator characters # # DSET_CMPD_TWO: two-dimensional dataset with compound type # # # # The following datasets are one-dimensional, chunked, max. dimension setting: # @@ -282,11 +329,11 @@ done; ################################################################################################# # # # Tests on expected failures: # -# Invalid file name # -# Unable to find dataset, invalid dataset # -# DSET_NONE and DSET_NOMAX # -# Invalid input to options --width and --polling # -# Invalid field names for -f option # +# Invalid file name # +# Unable to find dataset, invalid dataset # +# DSET_NONE and DSET_NOMAX # +# Invalid input to options --width and --polling # +# Invalid field names for -f option # # # ################################################################################################# # @@ -296,21 +343,21 @@ $GEN_TEST_BIN TOOLTEST w-help1.ddl 0 --help # # Tests on expected failures -TOOLTEST w-err-dset1.ddl 1 WATCH.h5 -TOOLTEST w-err-dset2.ddl 1 WATCH.h5/group/DSET_CMPD -TOOLTEST w-err-dset-none.ddl 1 WATCH.h5/DSET_NONE -TOOLTEST w-err-dset-nomax.ddl 1 WATCH.h5/DSET_NOMAX -TOOLTEST w-err-file.ddl 1 ../WATCH.h5/DSET_CMPD +TOOLTEST_ERR w-err-dset1.ddl 1 WATCH.h5 +TOOLTEST_ERR w-err-dset2.ddl 1 WATCH.h5/group/DSET_CMPD +TOOLTEST_ERR w-err-dset-none.ddl 1 WATCH.h5/DSET_NONE +TOOLTEST_ERR w-err-dset-nomax.ddl 1 WATCH.h5/DSET_NOMAX +TOOLTEST_ERR w-err-file.ddl 1 ../WATCH.h5/DSET_CMPD TOOLTEST w-err-width.ddl 1 --width=-8 WATCH.h5/DSET_ONE TOOLTEST w-err-poll.ddl 1 --polling=-8 WATCH.h5/DSET_ONE TOOLTEST w-err-poll0.ddl 1 --polling=0 WATCH.h5/DSET_ONE # # Tests on invalid field names via --fields option for a compound typed dataset: DSET_CMPD -TOOLTEST w-err-cmpd1.ddl 1 --fields=fieldx WATCH.h5/DSET_CMPD -TOOLTEST w-err-cmpd2.ddl 1 --fields=field1,field2. WATCH.h5/DSET_CMPD -TOOLTEST w-err-cmpd3.ddl 1 --fields=field1,field2, WATCH.h5/DSET_CMPD -TOOLTEST w-err-cmpd4.ddl 1 --fields=field1,field2.b.k WATCH.h5/DSET_CMPD -TOOLTEST w-err-cmpd5.ddl 1 --fields=field1 --fields=field2.b.k WATCH.h5/DSET_CMPD +TOOLTEST_ERR w-err-cmpd1.ddl 1 --fields=fieldx WATCH.h5/DSET_CMPD +TOOLTEST_ERR w-err-cmpd2.ddl 1 --fields=field1,field2. WATCH.h5/DSET_CMPD +TOOLTEST_ERR w-err-cmpd3.ddl 1 --fields=field1,field2, WATCH.h5/DSET_CMPD +TOOLTEST_ERR w-err-cmpd4.ddl 1 --fields=field1,field2.b.k WATCH.h5/DSET_CMPD +TOOLTEST_ERR w-err-cmpd5.ddl 1 --fields=field1 --fields=field2.b.k WATCH.h5/DSET_CMPD # echo "DONE WITH 1st SET OF TESTS" # diff --git a/hl/tools/testfiles/w-err-cmpd1.ddl b/hl/tools/testfiles/w-err-cmpd1.err index 775d6a0..9c165fb 100644 --- a/hl/tools/testfiles/w-err-cmpd1.ddl +++ b/hl/tools/testfiles/w-err-cmpd1.err @@ -1,2 +1 @@ -Opened "WATCH.h5" with sec2 driver. h5watch error: error in processing <list_of_fields> diff --git a/hl/tools/testfiles/w-err-cmpd2.ddl b/hl/tools/testfiles/w-err-cmpd2.err index 775d6a0..9c165fb 100644 --- a/hl/tools/testfiles/w-err-cmpd2.ddl +++ b/hl/tools/testfiles/w-err-cmpd2.err @@ -1,2 +1 @@ -Opened "WATCH.h5" with sec2 driver. h5watch error: error in processing <list_of_fields> diff --git a/hl/tools/testfiles/w-err-cmpd3.ddl b/hl/tools/testfiles/w-err-cmpd3.err index 775d6a0..9c165fb 100644 --- a/hl/tools/testfiles/w-err-cmpd3.ddl +++ b/hl/tools/testfiles/w-err-cmpd3.err @@ -1,2 +1 @@ -Opened "WATCH.h5" with sec2 driver. h5watch error: error in processing <list_of_fields> diff --git a/hl/tools/testfiles/w-err-cmpd4.ddl b/hl/tools/testfiles/w-err-cmpd4.err index 775d6a0..9c165fb 100644 --- a/hl/tools/testfiles/w-err-cmpd4.ddl +++ b/hl/tools/testfiles/w-err-cmpd4.err @@ -1,2 +1 @@ -Opened "WATCH.h5" with sec2 driver. h5watch error: error in processing <list_of_fields> diff --git a/hl/tools/testfiles/w-err-cmpd5.err b/hl/tools/testfiles/w-err-cmpd5.err new file mode 100644 index 0000000..9c165fb --- /dev/null +++ b/hl/tools/testfiles/w-err-cmpd5.err @@ -0,0 +1 @@ +h5watch error: error in processing <list_of_fields> diff --git a/hl/tools/testfiles/w-err-dset-nomax.ddl b/hl/tools/testfiles/w-err-dset-nomax.err index b99cf84..fd5ca7e 100644 --- a/hl/tools/testfiles/w-err-dset-nomax.ddl +++ b/hl/tools/testfiles/w-err-dset-nomax.err @@ -1,2 +1 @@ -Opened "WATCH.h5" with sec2 driver. h5watch error: "/DSET_NOMAX" should have unlimited or max. dimension setting diff --git a/hl/tools/testfiles/w-err-dset-none.ddl b/hl/tools/testfiles/w-err-dset-none.err index cbf6770..db781c3 100644 --- a/hl/tools/testfiles/w-err-dset-none.ddl +++ b/hl/tools/testfiles/w-err-dset-none.err @@ -1,2 +1 @@ -Opened "WATCH.h5" with sec2 driver. h5watch error: "/DSET_NONE" should be a chunked or virtual dataset diff --git a/hl/tools/testfiles/w-err-dset1.ddl b/hl/tools/testfiles/w-err-dset1.err index 433c4d6..d6b2a6e 100644 --- a/hl/tools/testfiles/w-err-dset1.ddl +++ b/hl/tools/testfiles/w-err-dset1.err @@ -1,2 +1 @@ -Opened "WATCH.h5" with sec2 driver. h5watch error: no dataset specified diff --git a/hl/tools/testfiles/w-err-dset2.ddl b/hl/tools/testfiles/w-err-dset2.err index 81b52de..3f77ec8 100644 --- a/hl/tools/testfiles/w-err-dset2.ddl +++ b/hl/tools/testfiles/w-err-dset2.err @@ -1,2 +1 @@ -Opened "WATCH.h5" with sec2 driver. h5watch error: unable to open dataset "/group/DSET_CMPD" diff --git a/hl/tools/testfiles/w-err-file.ddl b/hl/tools/testfiles/w-err-file.err index 015661f..015661f 100644 --- a/hl/tools/testfiles/w-err-file.ddl +++ b/hl/tools/testfiles/w-err-file.err diff --git a/hl/tools/testfiles/w-err-cmpd5.ddl b/hl/tools/testfiles/w-err-std.ddl index 775d6a0..775d6a0 100644 --- a/hl/tools/testfiles/w-err-cmpd5.ddl +++ b/hl/tools/testfiles/w-err-std.ddl diff --git a/java/src/hdf/hdf5lib/H5.java b/java/src/hdf/hdf5lib/H5.java index f9f9b65..bce0034 100644 --- a/java/src/hdf/hdf5lib/H5.java +++ b/java/src/hdf/hdf5lib/H5.java @@ -852,7 +852,8 @@ public class H5 implements java.io.Serializable { * @exception HDF5LibraryException * - Error from the HDF-5 Library. **/ - public static long H5Aget_space(long attr_id) throws HDF5LibraryException { + public static long H5Aget_space(long attr_id) throws HDF5LibraryException + { long id = _H5Aget_space(attr_id); if (id > 0) { log.trace("OPEN_IDS: H5Aget_space add {}", id); @@ -888,7 +889,8 @@ public class H5 implements java.io.Serializable { * @exception HDF5LibraryException * - Error from the HDF-5 Library. **/ - public static long H5Aget_type(long attr_id) throws HDF5LibraryException { + public static long H5Aget_type(long attr_id) throws HDF5LibraryException + { long id = _H5Aget_type(attr_id); if (id > 0) { log.trace("OPEN_IDS: H5Aget_type add {}", id); @@ -918,8 +920,9 @@ public class H5 implements java.io.Serializable { * @exception NullPointerException * - Name is null. **/ - public static long H5Aopen(long obj_id, String attr_name, long aapl_id) throws HDF5LibraryException, - NullPointerException { + public static long H5Aopen(long obj_id, String attr_name, long aapl_id) + throws HDF5LibraryException, NullPointerException + { long id = _H5Aopen(obj_id, attr_name, aapl_id); if (id > 0) { log.trace("OPEN_IDS: H5Aopen add {}", id); @@ -959,7 +962,8 @@ public class H5 implements java.io.Serializable { * - Name is null. **/ public static long H5Aopen_by_idx(long loc_id, String obj_name, int idx_type, int order, long n, long aapl_id, - long lapl_id) throws HDF5LibraryException, NullPointerException { + long lapl_id) throws HDF5LibraryException, NullPointerException + { long id = _H5Aopen_by_idx(loc_id, obj_name, idx_type, order, n, aapl_id, lapl_id); if (id > 0) { log.trace("OPEN_IDS: H5Aopen_by_idx add {}", id); @@ -994,7 +998,8 @@ public class H5 implements java.io.Serializable { * - obj_name is null. **/ public static long H5Aopen_by_name(long loc_id, String obj_name, String attr_name, long aapl_id, long lapl_id) - throws HDF5LibraryException, NullPointerException { + throws HDF5LibraryException, NullPointerException + { long id = _H5Aopen_by_name(loc_id, obj_name, attr_name, aapl_id, lapl_id); if (id > 0) { log.trace("OPEN_IDS: H5Aopen_by_name add {}", id); @@ -1015,8 +1020,10 @@ public class H5 implements java.io.Serializable { * IN: Identifier of an attribute to read. * @param mem_type_id * IN: Identifier of the attribute datatype (in memory). - * @param buf - * IN: Buffer for data to be read. + * @param obj + * Buffer to store data read from the file. + * @param isCriticalPinning + * request lock on data reference. * * @return a non-negative value if successful * @@ -1025,9 +1032,19 @@ public class H5 implements java.io.Serializable { * @exception NullPointerException * - data buffer is null. **/ - public synchronized static native int H5Aread(long attr_id, long mem_type_id, byte[] buf) + public synchronized static native int H5Aread(long attr_id, long mem_type_id, byte[] obj, boolean isCriticalPinning) throws HDF5LibraryException, NullPointerException; + public synchronized static int H5Aread(long attr_id, long mem_type_id, byte[] buf) throws HDF5LibraryException, NullPointerException + { + return H5Aread(attr_id, mem_type_id, buf, true); + } + + public synchronized static int H5Aread(long attr_id, long mem_type_id, Object obj) throws HDF5Exception, HDF5LibraryException, NullPointerException + { + return H5Aread(attr_id, mem_type_id, obj, true); + } + /** * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with * mem_type_id. The entire attribute is read into data object from the file. @@ -1038,31 +1055,143 @@ public class H5 implements java.io.Serializable { * IN: Identifier of the attribute datatype (in memory). * @param obj * IN: Object for data to be read. + * @param isCriticalPinning + * request lock on data reference. * * @return a non-negative value if successful * + * @exception HDF5Exception + * - Failure in the data conversion. * @exception HDF5LibraryException * - Error from the HDF-5 Library. * @exception NullPointerException * - data buffer is null. See public synchronized static native int H5Aread( ) **/ - public synchronized static int H5Aread(long attr_id, long mem_type_id, Object obj) throws HDF5Exception, - NullPointerException { - HDFArray theArray = new HDFArray(obj); - byte[] buf = theArray.emptyBytes(); + public synchronized static int H5Aread(long attr_id, long mem_type_id, Object obj, boolean isCriticalPinning) + throws HDF5Exception, HDF5LibraryException, NullPointerException + { + int status = -1; + boolean is1D = false; - // This will raise an exception if there is an error - int status = H5Aread(attr_id, mem_type_id, buf); + Class dataClass = obj.getClass(); + if (!dataClass.isArray()) { + throw (new HDF5JavaException("H5Aread: data is not an array")); + } - // No exception: status really ought to be OK - if (status >= 0) { - obj = theArray.arrayify(buf); + String cname = dataClass.getName(); + is1D = (cname.lastIndexOf('[') == cname.indexOf('[')); + char dname = cname.charAt(cname.lastIndexOf("[") + 1); + log.trace("H5Aread: cname={} is1D={} dname={}", cname, is1D, dname); + + if (is1D && (dname == 'B')) { + log.trace("H5Aread_dname_B"); + status = H5Aread(attr_id, mem_type_id, (byte[]) obj, isCriticalPinning); + } + else if (is1D && (dname == 'S')) { + log.trace("H5Aread_dname_S"); + status = H5Aread_short(attr_id, mem_type_id, (short[]) obj, isCriticalPinning); + } + else if (is1D && (dname == 'I')) { + log.trace("H5Aread_dname_I"); + status = H5Aread_int(attr_id, mem_type_id, (int[]) obj, isCriticalPinning); + } + else if (is1D && (dname == 'J')) { + log.trace("H5Aread_dname_J"); + status = H5Aread_long(attr_id, mem_type_id, (long[]) obj, isCriticalPinning); + } + else if (is1D && (dname == 'F')) { + log.trace("H5Aread_dname_F"); + status = H5Aread_float(attr_id, mem_type_id, (float[]) obj, isCriticalPinning); + } + else if (is1D && (dname == 'D')) { + log.trace("H5Aread_dname_D"); + status = H5Aread_double(attr_id, mem_type_id, (double[]) obj, isCriticalPinning); + } + else if ((H5.H5Tdetect_class(mem_type_id, HDF5Constants.H5T_REFERENCE) && (is1D && (dataClass.getComponentType() == String.class))) || H5.H5Tequal(mem_type_id, HDF5Constants.H5T_STD_REF_DSETREG)) { + log.trace("H5Aread_reg_ref"); + status = H5Aread_reg_ref(attr_id, mem_type_id, (String[]) obj); + } + else if (is1D && (dataClass.getComponentType() == String.class)) { + log.trace("H5Aread_string type"); + status = H5Aread_string(attr_id, mem_type_id, (String[]) obj); + } + else { + // Create a data buffer to hold the data into a Java Array + HDFArray theArray = new HDFArray(obj); + byte[] buf = theArray.emptyBytes(); + log.trace("H5Aread_else"); + + // This will raise an exception if there is an error + status = H5Aread(attr_id, mem_type_id, buf, isCriticalPinning); + + // No exception: status really ought to be OK + if (status >= 0) { + obj = theArray.arrayify(buf); + } + + // clean up these: assign 'null' as hint to gc() + buf = null; + theArray = null; } return status; } - public synchronized static native int H5AreadVL(long attr_id, long mem_type_id, String[] buf) + public synchronized static native int H5Aread_double(long attr_id, long mem_type_id, double[] buf, boolean isCriticalPinning) + throws HDF5LibraryException, NullPointerException; + + public synchronized static int H5Aread_double(long attr_id, long mem_type_id, double[] buf) + throws HDF5LibraryException, NullPointerException + { + return H5Aread_double(attr_id, mem_type_id, buf, true); + } + + public synchronized static native int H5Aread_float(long attr_id, long mem_type_id, float[] buf, boolean isCriticalPinning) + throws HDF5LibraryException, NullPointerException; + + public synchronized static int H5Aread_float(long attr_id, long mem_type_id, float[] buf) + throws HDF5LibraryException, NullPointerException + { + return H5Aread_float(attr_id, mem_type_id, buf, true); + } + + public synchronized static native int H5Aread_int(long attr_id, long mem_type_id, int[] buf, boolean isCriticalPinning) + throws HDF5LibraryException, NullPointerException; + + public synchronized static int H5Aread_int(long attr_id, long mem_type_id, int[] buf) + throws HDF5LibraryException, NullPointerException + { + return H5Aread_int(attr_id, mem_type_id, buf, true); + } + + public synchronized static native int H5Aread_long(long attr_id, long mem_type_id, long[] buf, boolean isCriticalPinning) + throws HDF5LibraryException, NullPointerException; + + public synchronized static int H5Aread_long(long attr_id, long mem_type_id, long[] buf) + throws HDF5LibraryException, NullPointerException + { + return H5Aread_long(attr_id, mem_type_id, buf, true); + } + + public synchronized static native int H5Aread_reg_ref(long attr_id, long mem_type_id, String[] buf) + throws HDF5LibraryException, NullPointerException; + + public synchronized static native int H5Aread_short(long attr_id, long mem_type_id, short[] buf, boolean isCriticalPinning) + throws HDF5LibraryException, NullPointerException; + + public synchronized static int H5Aread_short(long attr_id, long mem_type_id, short[] buf) + throws HDF5LibraryException, NullPointerException + { + return H5Aread_short(attr_id, mem_type_id, buf, true); + } + + public synchronized static native int H5AreadVL(long attr_id, long mem_type_id, Object[] buf) + throws HDF5LibraryException, NullPointerException; + + public synchronized static native int H5Aread_string(long attr_id, long mem_type_id, String[] buf) + throws HDF5LibraryException, NullPointerException; + + public synchronized static native int H5Aread_VLStrings(long attr_id, long mem_type_id, Object[] buf) throws HDF5LibraryException, NullPointerException; public synchronized static native int H5AreadComplex(long attr_id, long mem_type_id, String[] buf) @@ -1123,7 +1252,9 @@ public class H5 implements java.io.Serializable { * @param mem_type_id * IN: Identifier of the attribute datatype (in memory). * @param buf - * IN: Data to be written. + * IN: Buffer with data to be written to the file. + * @param isCriticalPinning + * IN: request lock on data reference. * * @return a non-negative value if successful * @@ -1132,9 +1263,21 @@ public class H5 implements java.io.Serializable { * @exception NullPointerException * - data is null. **/ - public synchronized static native int H5Awrite(long attr_id, long mem_type_id, byte[] buf) + public synchronized static native int H5Awrite(long attr_id, long mem_type_id, byte[] buf, boolean isCriticalPinning) throws HDF5LibraryException, NullPointerException; + public synchronized static int H5Awrite(long attr_id, long mem_type_id, byte[] buf) + throws HDF5LibraryException, NullPointerException + { + return H5Awrite(attr_id, mem_type_id, buf, true); + } + + public synchronized static int H5Awrite(long attr_id, long mem_type_id, Object obj) + throws HDF5Exception, HDF5LibraryException, NullPointerException + { + return H5Awrite(attr_id, mem_type_id, obj, true); + } + /** * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with * mem_type_id. The entire attribute is written from data object to the file. @@ -1145,28 +1288,140 @@ public class H5 implements java.io.Serializable { * IN: Identifier of the attribute datatype (in memory). * @param obj * IN: Data object to be written. + * @param isCriticalPinning + * request lock on data reference. * * @return a non-negative value if successful * + * @exception HDF5Exception + * - Failure in the data conversion. * @exception HDF5LibraryException * - Error from the HDF-5 Library. * @exception NullPointerException - * - data object is null. See public synchronized static native int H5Awrite(int attr_id, int - * mem_type_id, byte[] buf); + * - data object is null **/ - public synchronized static int H5Awrite(long attr_id, long mem_type_id, Object obj) - throws HDF5Exception, NullPointerException + public synchronized static int H5Awrite(long attr_id, long mem_type_id, Object obj, boolean isCriticalPinning) + throws HDF5Exception, HDF5LibraryException, NullPointerException { - HDFArray theArray = new HDFArray(obj); - byte[] buf = theArray.byteify(); + int status = -1; + boolean is1D = false; - int retVal = H5Awrite(attr_id, mem_type_id, buf); - buf = null; - theArray = null; - return retVal; + Class dataClass = obj.getClass(); + if (!dataClass.isArray()) { + throw (new HDF5JavaException("H5Dwrite: data is not an array")); + } + + String cname = dataClass.getName(); + is1D = (cname.lastIndexOf('[') == cname.indexOf('[')); + char dname = cname.charAt(cname.lastIndexOf("[") + 1); + + if (is1D && (dname == 'B')) { + status = H5Awrite(attr_id, mem_type_id, (byte[]) obj, isCriticalPinning); + } + else if (is1D && (dname == 'S')) { + status = H5Awrite_short(attr_id, mem_type_id, (short[]) obj, isCriticalPinning); + } + else if (is1D && (dname == 'I')) { + status = H5Awrite_int(attr_id, mem_type_id, (int[]) obj, isCriticalPinning); + } + else if (is1D && (dname == 'J')) { + status = H5Awrite_long(attr_id, mem_type_id, (long[]) obj, isCriticalPinning); + } + else if (is1D && (dname == 'F')) { + status = H5Awrite_float(attr_id, mem_type_id, (float[]) obj, isCriticalPinning); + } + else if (is1D && (dname == 'D')) { + status = H5Awrite_double(attr_id, mem_type_id, (double[]) obj, isCriticalPinning); + } + else if (is1D && (dataClass.getComponentType() == String.class)) { + log.trace("H5Dwrite_string type"); + status = H5Awrite_string(attr_id, mem_type_id, (String[]) obj); + } + else { + HDFArray theArray = new HDFArray(obj); + byte[] buf = theArray.byteify(); + + status = H5Awrite(attr_id, mem_type_id, buf); + buf = null; + theArray = null; + } + + return status; + } + + public synchronized static native int H5Awrite_double(long attr_id, long mem_type_id, double[] buf, boolean isCriticalPinning) + throws HDF5LibraryException, NullPointerException; + + public synchronized static int H5Awrite_double(long attr_id, long mem_type_id, double[] buf) + throws HDF5LibraryException, NullPointerException + { + return H5Awrite_double(attr_id, mem_type_id, buf, true); } - public synchronized static native int H5AwriteVL(long attr_id, long mem_type_id, String[] buf) + public synchronized static native int H5Awrite_float(long attr_id, long mem_type_id, float[] buf, boolean isCriticalPinning) + throws HDF5LibraryException, NullPointerException; + + public synchronized static int H5Awrite_float(long attr_id, long mem_type_id, float[] buf) + throws HDF5LibraryException, NullPointerException + { + return H5Awrite_float(attr_id, mem_type_id, buf, true); + } + + public synchronized static native int H5Awrite_int(long attr_id, long mem_type_id, int[] buf, boolean isCriticalPinning) + throws HDF5LibraryException, NullPointerException; + + public synchronized static int H5Awrite_int(long attr_id, long mem_type_id, int[] buf) + throws HDF5LibraryException, NullPointerException + { + return H5Awrite_int(attr_id, mem_type_id, buf, true); + } + + public synchronized static native int H5Awrite_long(long attr_id, long mem_type_id, long[] buf, boolean isCriticalPinning) + throws HDF5LibraryException, NullPointerException; + + public synchronized static int H5Awrite_long(long attr_id, long mem_type_id, long[] buf) + throws HDF5LibraryException, NullPointerException + { + return H5Awrite_long(attr_id, mem_type_id, buf, true); + } + + public synchronized static native int H5Awrite_short(long attr_id, long mem_type_id, short[] buf, boolean isCriticalPinning) + throws HDF5LibraryException, NullPointerException; + + public synchronized static int H5Awrite_short(long attr_id, long mem_type_id, short[] buf) + throws HDF5LibraryException, NullPointerException + { + return H5Awrite_short(attr_id, mem_type_id, buf, true); + } + + public synchronized static native int H5Awrite_string(long attr_id, long mem_type_id, String[] buf) + throws HDF5LibraryException, NullPointerException; + + public synchronized static native int H5AwriteVL(long attr_id, long mem_type_id, Object[] buf) + throws HDF5LibraryException, NullPointerException; + + /** + * H5Awrite_VLStrings writes a variable length String dataset, specified by its identifier attr_id, from + * the application memory buffer buf into the file. + * + * ---- contributed by Rosetta Biosoftware + * + * @param attr_id + * Identifier of the attribute read from. + * @param mem_type_id + * Identifier of the memory datatype. + * @param buf + * Buffer with data to be written to the file. + * + * @return a non-negative value if successful + * + * @exception HDF5LibraryException + * - Error from the HDF-5 Library. + * @exception NullPointerException + * - name is null. + **/ + + public synchronized static native int H5Awrite_VLStrings(long attr_id, long mem_type_id, Object[] buf) throws HDF5LibraryException, NullPointerException; /** @@ -1614,8 +1869,8 @@ public class H5 implements java.io.Serializable { * @exception NullPointerException * - name is null. **/ - public static long H5Dopen(long loc_id, String name, long dapl_id) throws HDF5LibraryException, - NullPointerException { + public static long H5Dopen(long loc_id, String name, long dapl_id) throws HDF5LibraryException, NullPointerException + { long id = _H5Dopen2(loc_id, name, dapl_id); if (id > 0) { log.trace("OPEN_IDS: H5Dopen add {}", id); @@ -1664,12 +1919,14 @@ public class H5 implements java.io.Serializable { NullPointerException; public synchronized static int H5Dread(long dataset_id, long mem_type_id, long mem_space_id, long file_space_id, - long xfer_plist_id, byte[] buf) throws HDF5LibraryException, NullPointerException { + long xfer_plist_id, byte[] buf) throws HDF5LibraryException, NullPointerException + { return H5Dread(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true); } public synchronized static int H5Dread(long dataset_id, long mem_type_id, long mem_space_id, long file_space_id, - long xfer_plist_id, Object obj) throws HDF5Exception, HDF5LibraryException, NullPointerException { + long xfer_plist_id, Object obj) throws HDF5Exception, HDF5LibraryException, NullPointerException + { return H5Dread(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, obj, true); } @@ -1703,7 +1960,8 @@ public class H5 implements java.io.Serializable { **/ public synchronized static int H5Dread(long dataset_id, long mem_type_id, long mem_space_id, long file_space_id, long xfer_plist_id, Object obj, boolean isCriticalPinning) throws HDF5Exception, HDF5LibraryException, - NullPointerException { + NullPointerException + { int status = -1; boolean is1D = false; @@ -1734,7 +1992,8 @@ public class H5 implements java.io.Serializable { } else if (is1D && (dname == 'J')) { log.trace("H5Dread_dname_J"); - status = H5Dread_long(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, (long[]) obj); + status = H5Dread_long(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, (long[]) obj, + isCriticalPinning); } else if (is1D && (dname == 'F')) { log.trace("H5Dread_dname_F"); @@ -1783,7 +2042,8 @@ public class H5 implements java.io.Serializable { throws HDF5LibraryException, NullPointerException; public synchronized static int H5Dread_double(long dataset_id, long mem_type_id, long mem_space_id, - long file_space_id, long xfer_plist_id, double[] buf) throws HDF5LibraryException, NullPointerException { + long file_space_id, long xfer_plist_id, double[] buf) throws HDF5LibraryException, NullPointerException + { return H5Dread_double(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true); } @@ -1792,7 +2052,8 @@ public class H5 implements java.io.Serializable { throws HDF5LibraryException, NullPointerException; public synchronized static int H5Dread_float(long dataset_id, long mem_type_id, long mem_space_id, - long file_space_id, long xfer_plist_id, float[] buf) throws HDF5LibraryException, NullPointerException { + long file_space_id, long xfer_plist_id, float[] buf) throws HDF5LibraryException, NullPointerException + { return H5Dread_float(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true); } @@ -1801,7 +2062,8 @@ public class H5 implements java.io.Serializable { NullPointerException; public synchronized static int H5Dread_int(long dataset_id, long mem_type_id, long mem_space_id, - long file_space_id, long xfer_plist_id, int[] buf) throws HDF5LibraryException, NullPointerException { + long file_space_id, long xfer_plist_id, int[] buf) throws HDF5LibraryException, NullPointerException + { return H5Dread_int(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true); } @@ -1810,22 +2072,21 @@ public class H5 implements java.io.Serializable { NullPointerException; public synchronized static int H5Dread_long(long dataset_id, long mem_type_id, long mem_space_id, - long file_space_id, long xfer_plist_id, long[] buf) throws HDF5LibraryException, NullPointerException { + long file_space_id, long xfer_plist_id, long[] buf) throws HDF5LibraryException, NullPointerException + { return H5Dread_long(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true); } public synchronized static native int H5Dread_reg_ref(long dataset_id, long mem_type_id, long mem_space_id, long file_space_id, long xfer_plist_id, String[] buf) throws HDF5LibraryException, NullPointerException; - public synchronized static native int H5Dread_reg_ref_data(long dataset_id, long mem_type_id, long mem_space_id, - long file_space_id, long xfer_plist_id, String[] buf) throws HDF5LibraryException, NullPointerException; - public synchronized static native int H5Dread_short(long dataset_id, long mem_type_id, long mem_space_id, long file_space_id, long xfer_plist_id, short[] buf, boolean isCriticalPinning) throws HDF5LibraryException, NullPointerException; public synchronized static int H5Dread_short(long dataset_id, long mem_type_id, long mem_space_id, - long file_space_id, long xfer_plist_id, short[] buf) throws HDF5LibraryException, NullPointerException { + long file_space_id, long xfer_plist_id, short[] buf) throws HDF5LibraryException, NullPointerException + { return H5Dread_short(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true); } @@ -1929,12 +2190,14 @@ public class H5 implements java.io.Serializable { NullPointerException; public synchronized static int H5Dwrite(long dataset_id, long mem_type_id, long mem_space_id, long file_space_id, - long xfer_plist_id, byte[] buf) throws HDF5LibraryException, NullPointerException { + long xfer_plist_id, byte[] buf) throws HDF5LibraryException, NullPointerException + { return H5Dwrite(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true); } public synchronized static int H5Dwrite(long dataset_id, long mem_type_id, long mem_space_id, long file_space_id, - long xfer_plist_id, Object obj) throws HDF5Exception, HDF5LibraryException, NullPointerException { + long xfer_plist_id, Object obj) throws HDF5Exception, HDF5LibraryException, NullPointerException + { return H5Dwrite(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, obj, true); } @@ -1968,7 +2231,8 @@ public class H5 implements java.io.Serializable { **/ public synchronized static int H5Dwrite(long dataset_id, long mem_type_id, long mem_space_id, long file_space_id, long xfer_plist_id, Object obj, boolean isCriticalPinning) throws HDF5Exception, HDF5LibraryException, - NullPointerException { + NullPointerException + { int status = -1; boolean is1D = false; @@ -2031,7 +2295,8 @@ public class H5 implements java.io.Serializable { throws HDF5LibraryException, NullPointerException; public synchronized static int H5Dwrite_double(long dataset_id, long mem_type_id, long mem_space_id, - long file_space_id, long xfer_plist_id, double[] buf) throws HDF5LibraryException, NullPointerException { + long file_space_id, long xfer_plist_id, double[] buf) throws HDF5LibraryException, NullPointerException + { return H5Dwrite_double(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true); } @@ -2040,7 +2305,8 @@ public class H5 implements java.io.Serializable { throws HDF5LibraryException, NullPointerException; public synchronized static int H5Dwrite_float(long dataset_id, long mem_type_id, long mem_space_id, - long file_space_id, long xfer_plist_id, float[] buf) throws HDF5LibraryException, NullPointerException { + long file_space_id, long xfer_plist_id, float[] buf) throws HDF5LibraryException, NullPointerException + { return H5Dwrite_float(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true); } @@ -2049,7 +2315,8 @@ public class H5 implements java.io.Serializable { NullPointerException; public synchronized static int H5Dwrite_int(long dataset_id, long mem_type_id, long mem_space_id, - long file_space_id, long xfer_plist_id, int[] buf) throws HDF5LibraryException, NullPointerException { + long file_space_id, long xfer_plist_id, int[] buf) throws HDF5LibraryException, NullPointerException + { return H5Dwrite_int(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true); } @@ -2058,7 +2325,8 @@ public class H5 implements java.io.Serializable { NullPointerException; public synchronized static int H5Dwrite_long(long dataset_id, long mem_type_id, long mem_space_id, - long file_space_id, long xfer_plist_id, long[] buf) throws HDF5LibraryException, NullPointerException { + long file_space_id, long xfer_plist_id, long[] buf) throws HDF5LibraryException, NullPointerException + { return H5Dwrite_long(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true); } @@ -2067,7 +2335,8 @@ public class H5 implements java.io.Serializable { throws HDF5LibraryException, NullPointerException; public synchronized static int H5Dwrite_short(long dataset_id, long mem_type_id, long mem_space_id, - long file_space_id, long xfer_plist_id, short[] buf) throws HDF5LibraryException, NullPointerException { + long file_space_id, long xfer_plist_id, short[] buf) throws HDF5LibraryException, NullPointerException + { return H5Dwrite_short(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true); } @@ -2808,10 +3077,29 @@ public class H5 implements java.io.Serializable { * - Error from the HDF-5 Library. * @exception NullPointerException * - name is null. + * + * @deprecated As of HDF5 1.10.5 in favor of H5Fis_accessible. **/ public synchronized static native boolean H5Fis_hdf5(String name) throws HDF5LibraryException, NullPointerException; /** + * H5Fis_accessible determines if the file can be opened with the given fapl. + * + * @param name + * IN: File name to check. + * @param file_id + * IN: File identifier for a currently-open HDF5 file + * + * @return true if file is accessible, false if not. + * + * @exception HDF5LibraryException + * - Error from the HDF-5 Library. + * @exception NullPointerException + * - name is null. + **/ + public synchronized static native boolean H5Fis_accessible(String name, long file_id) throws HDF5LibraryException, NullPointerException; + + /** * H5Fmount mounts the file specified by child_id onto the group specified by loc_id and name using the mount * properties plist_id. * diff --git a/java/src/jni/CMakeLists.txt b/java/src/jni/CMakeLists.txt index 7b95e0b..50e76e1 100644 --- a/java/src/jni/CMakeLists.txt +++ b/java/src/jni/CMakeLists.txt @@ -48,7 +48,9 @@ set (CMAKE_INCLUDE_CURRENT_DIR_IN_INTERFACE ON) ########### JNI libraries always must be built shared ############### add_library (${HDF5_JAVA_JNI_LIB_TARGET} SHARED ${HDF5_JAVA_JNI_CSRCS} ${HDF5_JAVA_JNI_CHDRS}) -target_include_directories(${HDF5_JAVA_JNI_LIB_TARGET} PRIVATE ${HDF5_BINARY_DIR} ${HDF5_JAVA_JNI_SOURCE_DIR}) +target_include_directories(${HDF5_JAVA_JNI_LIB_TARGET} + PRIVATE "${HDF5_BINARY_DIR};${HDF5_JAVA_JNI_SOURCE_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>" +) TARGET_C_PROPERTIES (${HDF5_JAVA_JNI_LIB_TARGET} SHARED) target_link_libraries (${HDF5_JAVA_JNI_LIB_TARGET} PUBLIC ${HDF5_LIBSH_TARGET}) set_target_properties (${HDF5_JAVA_JNI_LIB_TARGET} PROPERTIES FOLDER libraries/jni) diff --git a/java/src/jni/h5aImp.c b/java/src/jni/h5aImp.c index aba2240..e0ec4ca 100644 --- a/java/src/jni/h5aImp.c +++ b/java/src/jni/h5aImp.c @@ -60,6 +60,94 @@ static herr_t H5AreadVL_str (JNIEnv *env, hid_t attr_id, hid_t mem_id, jobjectAr static herr_t H5A_iterate_cb(hid_t g_id, const char *name, const H5A_info_t *info, void *cb_data); +/********************/ +/* Local Macros */ +/********************/ + +#define PIN_BYTE_ARRAY() { \ + if (isCriticalPinning) \ + buffP = (jbyte*)ENVPTR->GetPrimitiveArrayCritical(ENVPAR buf, &isCopy); \ + else \ + buffP = ENVPTR->GetByteArrayElements(ENVPAR buf, &isCopy); \ +} + +#define UNPIN_BYTE_ARRAY(mode) { \ + if (isCriticalPinning) \ + ENVPTR->ReleasePrimitiveArrayCritical(ENVPAR buf, buffP, mode); \ + else \ + ENVPTR->ReleaseByteArrayElements(ENVPAR buf, buffP, mode); \ +} + +#define PIN_SHORT_ARRAY() { \ + if (isCriticalPinning) \ + buffP = (jshort*)ENVPTR->GetPrimitiveArrayCritical(ENVPAR buf, &isCopy); \ + else \ + buffP = ENVPTR->GetShortArrayElements(ENVPAR buf, &isCopy); \ +} + +#define UNPIN_SHORT_ARRAY(mode) { \ + if (isCriticalPinning) \ + ENVPTR->ReleasePrimitiveArrayCritical(ENVPAR buf, buffP, mode); \ + else \ + ENVPTR->ReleaseShortArrayElements(ENVPAR buf, buffP, mode); \ +} + +#define PIN_INT_ARRAY() { \ + if (isCriticalPinning) \ + buffP = (jint*)ENVPTR->GetPrimitiveArrayCritical(ENVPAR buf, &isCopy); \ + else \ + buffP = ENVPTR->GetIntArrayElements(ENVPAR buf, &isCopy); \ +} + +#define UNPIN_INT_ARRAY(mode) { \ + if (isCriticalPinning) \ + ENVPTR->ReleasePrimitiveArrayCritical(ENVPAR buf, buffP, mode); \ + else \ + ENVPTR->ReleaseIntArrayElements(ENVPAR buf, buffP, mode); \ +} + +#define PIN_LONG_ARRAY() { \ + if (isCriticalPinning) \ + buffP = (jlong*)ENVPTR->GetPrimitiveArrayCritical(ENVPAR buf, &isCopy); \ + else \ + buffP = ENVPTR->GetLongArrayElements(ENVPAR buf,&isCopy); \ +} + +#define UNPIN_LONG_ARRAY(mode) { \ + if (isCriticalPinning) \ + ENVPTR->ReleasePrimitiveArrayCritical(ENVPAR buf, buffP, mode); \ + else \ + ENVPTR->ReleaseLongArrayElements(ENVPAR buf, buffP, mode); \ +} + +#define PIN_FLOAT_ARRAY() { \ + if (isCriticalPinning) \ + buffP = (jfloat*)ENVPTR->GetPrimitiveArrayCritical(ENVPAR buf, &isCopy); \ + else \ + buffP = ENVPTR->GetFloatArrayElements(ENVPAR buf, &isCopy); \ +} + +#define UNPIN_FLOAT_ARRAY(mode) { \ + if (isCriticalPinning) \ + ENVPTR->ReleasePrimitiveArrayCritical(ENVPAR buf, buffP, mode); \ + else \ + ENVPTR->ReleaseFloatArrayElements(ENVPAR buf, buffP, mode); \ +} + +#define PIN_DOUBLE_ARRAY() { \ + if (isCriticalPinning) \ + buffP = (jdouble*)ENVPTR->GetPrimitiveArrayCritical(ENVPAR buf, &isCopy); \ + else \ + buffP = ENVPTR->GetDoubleArrayElements(ENVPAR buf, &isCopy); \ +} + +#define UNPIN_DOUBLE_ARRAY(mode) { \ + if (isCriticalPinning) \ + ENVPTR->ReleasePrimitiveArrayCritical(ENVPAR buf, buffP, mode); \ + else \ + ENVPTR->ReleaseDoubleArrayElements(ENVPAR buf, buffP, mode); \ +} + /* * Class: hdf_hdf5lib_H5 @@ -129,36 +217,129 @@ Java_hdf_hdf5lib_H5__1H5Aopen_1idx return (jlong)attr_id; } /* end Java_hdf_hdf5lib_H5__1H5Aopen_1idx */ +static htri_t +H5Tdetect_variable_str + (hid_t tid) { + htri_t ret_val = 0; + + if (H5Tget_class(tid) == H5T_COMPOUND) { + unsigned i; + unsigned nm = (unsigned)H5Tget_nmembers(tid); + for(i = 0; i < nm; i++) { + htri_t status = 0; + hid_t mtid = 0; + if((mtid = H5Tget_member_type(tid, i)) < 0) + return -1; /* exit immediately on error */ + if((status = H5Tdetect_variable_str(mtid)) < 0) + return status; /* exit immediately on error */ + ret_val |= status; + H5Tclose (mtid); + } /* end for */ + } /* end if */ + else + ret_val = H5Tis_variable_str(tid); + + return ret_val; +} /* end H5Tdetect_variable_str */ + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Aread + * Signature: (JJ[BZ)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Aread + (JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jbyteArray buf, jboolean isCriticalPinning) +{ + herr_t status = -1; + jbyte *buffP; + jboolean isCopy; + htri_t data_class; + + if (buf == NULL) { + h5nullArgument( env,"H5Aread: buf is NULL"); + } /* end if */ + else if((data_class = H5Tdetect_class(mem_type_id, H5T_VLEN)) < 0) { + h5JNIFatalError(env, "H5Aread: H5Tdetect_class() failed"); + } /* end else if */ + else if(data_class == 1) { + h5badArgument(env, "H5Aread: buf does not support variable length type"); + } /* end else if */ + else { + /* recursive detect any vlen string in type (compound, array ...) */ + if((data_class = H5Tdetect_variable_str(mem_type_id)) < 0) { + h5JNIFatalError(env, "H5Aread: H5Tdetect_variable_str() failed"); + } /* end if */ + else if(data_class == 1) { + h5badArgument(env, "H5Aread: buf does not support variable length type"); + } /* end else if */ + else { + PIN_BYTE_ARRAY(); + + if (buffP == NULL) { + h5JNIFatalError(env, "H5Aread: buf not pinned"); + } /* end if */ + else { + status = H5Aread((hid_t)attr_id, (hid_t)mem_type_id, buffP); + if (status < 0) { + UNPIN_BYTE_ARRAY(JNI_ABORT); + h5libraryError(env); + } /* end if */ + else { + UNPIN_BYTE_ARRAY(0); /* update java buffer for return */ + } /* end else */ + } /* end else */ + } /* end else */ + } /* end else */ + + return (jint)status; +} /* end Java_hdf_hdf5lib_H5_H5Aread */ + /* * Class: hdf_hdf5lib_H5 * Method: H5Awrite - * Signature: (JJ[B)I + * Signature: (JJ[BZ)I */ JNIEXPORT jint JNICALL Java_hdf_hdf5lib_H5_H5Awrite - (JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jbyteArray buf) + (JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jbyteArray buf, jboolean isCriticalPinning) { herr_t status = -1; - jbyte *byteP; + jbyte *buffP; jboolean isCopy; + htri_t data_class; if (buf == NULL) { h5nullArgument( env,"H5Awrite: buf is NULL"); } /* end if */ + else if((data_class = H5Tdetect_class(mem_type_id, H5T_VLEN)) < 0) { + h5JNIFatalError(env, "H5Awrite: H5Tdetect_class() failed"); + } /* end else if */ + else if(data_class == 1) { + h5badArgument(env, "H5Awrite: buf does not support variable length type"); + } /* end else if */ else { - byteP = ENVPTR->GetByteArrayElements(ENVPAR buf, &isCopy); - if (byteP == NULL) { - h5JNIFatalError(env,"H5Awrite: buf is not pinned"); + /* recursive detect any vlen string in type (compound, array ...) */ + if((data_class = H5Tdetect_variable_str(mem_type_id)) < 0) { + h5JNIFatalError(env, "H5Awrite: H5Tdetect_variable_str() failed"); } /* end if */ + else if(data_class == 1) { + h5badArgument(env, "H5Awrite: buf does not support variable length type"); + } /* end else if */ else { - status = H5Awrite((hid_t)attr_id, (hid_t)mem_type_id, byteP); + PIN_BYTE_ARRAY(); + if (buffP == NULL) { + h5JNIFatalError(env, "H5Awrite: buf not pinned"); + } /* end if */ + else { + status = H5Awrite((hid_t)attr_id, (hid_t)mem_type_id, buffP); - /* free the buffer without copying back */ - ENVPTR->ReleaseByteArrayElements(ENVPAR buf, byteP, JNI_ABORT); + UNPIN_BYTE_ARRAY(JNI_ABORT); /* no need to update buffer */ - if (status < 0) - h5libraryError(env); - } + if (status < 0) + h5libraryError(env); + } /* end else */ + } /* end else */ } /* end else */ return (jint)status; @@ -166,190 +347,653 @@ Java_hdf_hdf5lib_H5_H5Awrite /* * Class: hdf_hdf5lib_H5 - * Method: H5Aread - * Signature: (JJ[B)I + * Method: H5Aread_short + * Signature: (JJ[SZ)I */ JNIEXPORT jint JNICALL -Java_hdf_hdf5lib_H5_H5Aread - (JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jbyteArray buf) +Java_hdf_hdf5lib_H5_H5Aread_1short + (JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jshortArray buf, jboolean isCriticalPinning) { herr_t status = -1; - jbyte *byteP; + jshort *buffP; jboolean isCopy; + htri_t data_class; if (buf == NULL) { - h5nullArgument( env,"H5Aread: buf is NULL"); + h5nullArgument(env, "H5Aread_short: buf is NULL"); } /* end if */ + else if((data_class = H5Tdetect_class(mem_type_id, H5T_VLEN)) < 0) { + h5JNIFatalError(env, "H5Aread: H5Tdetect_class() failed"); + } /* end else if */ + else if(data_class == 1) { + h5badArgument(env, "H5Aread_short: buf does not support variable length type"); + } /* end else if */ else { - byteP = ENVPTR->GetByteArrayElements(ENVPAR buf, &isCopy); - if (byteP == NULL) { - h5JNIFatalError( env,"H5Aread: buf is not pinned"); + /* recursive detect any vlen string in type (compound, array ...) */ + if((data_class = H5Tdetect_variable_str(mem_type_id)) < 0) { + h5JNIFatalError(env, "H5Aread_short: H5Tdetect_variable_str() failed"); } /* end if */ + else if(data_class == 1) { + h5badArgument(env, "H5Aread_short: buf does not support variable length type"); + } /* end else if */ else { - status = H5Aread((hid_t)attr_id, (hid_t)mem_type_id, byteP); - if (status < 0) { - ENVPTR->ReleaseByteArrayElements(ENVPAR buf, byteP, JNI_ABORT); - h5libraryError(env); + PIN_SHORT_ARRAY(); + if (buffP == NULL) { + h5JNIFatalError(env, "H5Aread_short: buf not pinned"); } /* end if */ - else { - ENVPTR->ReleaseByteArrayElements(ENVPAR buf, byteP, 0); + else { + status = H5Aread((hid_t)attr_id, (hid_t)mem_type_id, buffP); + + if (status < 0) { + UNPIN_SHORT_ARRAY(JNI_ABORT); + h5libraryError(env); + } /* end if */ + else { + UNPIN_SHORT_ARRAY(0); + } /* end else */ } /* end else */ } /* end else */ } /* end else */ return (jint)status; -} /* end Java_hdf_hdf5lib_H5_H5Aread */ +} /* end Java_hdf_hdf5lib_H5_H5Aread_1short */ /* * Class: hdf_hdf5lib_H5 - * Method: H5AwriteVL - * Signature: (JJ[Ljava/lang/String;)I + * Method: H5Awrite_short + * Signature: (JJ[SZ)I */ JNIEXPORT jint JNICALL -Java_hdf_hdf5lib_H5_H5AwriteVL - (JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jobjectArray buf) +Java_hdf_hdf5lib_H5_H5Awrite_1short + (JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jshortArray buf, jboolean isCriticalPinning) { - herr_t status = -1; - htri_t isStr = 0; - htri_t isVlenStr = 0; - htri_t isComplex = 0; + herr_t status = -1; + jshort *buffP; + jboolean isCopy; + htri_t data_class; + + if (buf == NULL ) { + h5nullArgument(env, "H5Awrite_short: buf is NULL"); + } /* end if */ + else if((data_class = H5Tdetect_class(mem_type_id, H5T_VLEN)) < 0) { + h5JNIFatalError(env, "H5Awrite_short: H5Tdetect_class() failed"); + } /* end else if */ + else if(data_class == 1) { + h5badArgument(env, "H5Awrite_short: buf does not support variable length type"); + } /* end else if */ + else { + /* recursive detect any vlen string in type (compound, array ...) */ + if((data_class = H5Tdetect_variable_str(mem_type_id)) < 0) { + h5JNIFatalError(env, "H5Awrite_short: H5Tdetect_variable_str() failed"); + } /* end if */ + else if(data_class == 1) { + h5badArgument(env, "H5Awrite_short: buf does not support variable length type"); + } /* end else if */ + else { + PIN_SHORT_ARRAY(); + if (buffP == NULL) { + h5JNIFatalError(env, "H5Awrite_short: buf not pinned"); + } /* end if */ + else { + status = H5Awrite((hid_t)attr_id, (hid_t)mem_type_id, buffP); + + UNPIN_SHORT_ARRAY(JNI_ABORT); + + if (status < 0) + h5libraryError(env); + } /* end else */ + } /* end else */ + } /* end else */ + + return (jint)status; +} /* end Java_hdf_hdf5lib_H5_H5Awrite_1short */ + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Aread_int + * Signature: (JJ[IZ)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Aread_1int + (JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jintArray buf, jboolean isCriticalPinning) +{ + herr_t status = -1; + jint *buffP; + jboolean isCopy; + htri_t data_class; if (buf == NULL) { - h5nullArgument(env, "H5AwriteVL: buf is NULL"); + h5nullArgument(env, "H5Aread_int: buf is NULL"); } /* end if */ + else if((data_class = H5Tdetect_class(mem_type_id, H5T_VLEN)) < 0) { + h5JNIFatalError(env, "H5Aread_int: H5Tdetect_class() failed"); + } /* end else if */ + else if(data_class == 1) { + h5badArgument(env, "H5Aread_int: buf does not support variable length type"); + } /* end else if */ else { - isStr = H5Tdetect_class((hid_t)mem_type_id, H5T_STRING); - if (H5Tget_class((hid_t)mem_type_id) == H5T_COMPOUND) { - unsigned i; - int nm = H5Tget_nmembers(mem_type_id); - for(i = 0; i <nm; i++) { - hid_t nested_tid = H5Tget_member_type((hid_t)mem_type_id, i); - isComplex = H5Tdetect_class((hid_t)nested_tid, H5T_COMPOUND) || - H5Tdetect_class((hid_t)nested_tid, H5T_VLEN); - H5Tclose(nested_tid); - } - } - else if (H5Tget_class((hid_t)mem_type_id) == H5T_VLEN) { - isVlenStr = 1; /* strings created by H5Tvlen_create(H5T_C_S1) */ - } - if (isStr == 0 || isComplex>0 || isVlenStr) { - status = H5AwriteVL_asstr(env, (hid_t)attr_id, (hid_t)mem_type_id, buf); - } - else if (isStr > 0) { - status = H5AwriteVL_str(env, (hid_t)attr_id, (hid_t)mem_type_id, buf); - } + /* recursive detect any vlen string in type (compound, array ...) */ + if((data_class = H5Tdetect_variable_str(mem_type_id)) < 0) { + h5JNIFatalError(env, "H5Aread_int: H5Tdetect_variable_str() failed"); + } /* end if */ + else if(data_class == 1) { + h5badArgument(env, "H5Aread_int: buf does not support variable length type"); + } /* end else if */ + else { + PIN_INT_ARRAY(); + if (buffP == NULL) { + h5JNIFatalError(env, "H5Aread_int: buf not pinned"); + } /* end if */ + else { + status = H5Aread((hid_t)attr_id, (hid_t)mem_type_id, buffP); + + if (status < 0) { + UNPIN_INT_ARRAY(JNI_ABORT); + h5libraryError(env); + } /* end if */ + else { + UNPIN_INT_ARRAY(0); + } /* end else */ + } /* end else */ + } /* end else */ } /* end else */ return (jint)status; -} /* end Java_hdf_hdf5lib_H5_H5Awrite_1VL */ +} /* end Java_hdf_hdf5lib_H5_H5Aread_1int */ -herr_t -H5AwriteVL_str - (JNIEnv *env, hid_t aid, hid_t tid, jobjectArray buf) +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Awrite_int + * Signature: (JJ[IZ)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Awrite_1int + (JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jintArray buf, jboolean isCriticalPinning) { - herr_t status = -1; - char **wdata; - jsize size; - jint i; + herr_t status = -1; + jint *buffP; + jboolean isCopy; + htri_t data_class; - size = ENVPTR->GetArrayLength(ENVPAR (jarray) buf); + if (buf == NULL) { + h5nullArgument(env, "H5Awrite_int: buf is NULL"); + } /* end if */ + else if((data_class = H5Tdetect_class(mem_type_id, H5T_VLEN)) < 0) { + h5JNIFatalError(env, "H5Awrite_int: H5Tdetect_class() failed"); + } /* end else if */ + else if(data_class == 1) { + h5badArgument(env, "H5Awrite_int: buf does not support variable length type"); + } /* end else if */ + else { + /* recursive detect any vlen string in type (compound, array ...) */ + if((data_class = H5Tdetect_variable_str(mem_type_id)) < 0) { + h5JNIFatalError(env, "H5Awrite_int: H5Tdetect_variable_str() failed"); + } /* end if */ + else if(data_class == 1) { + h5badArgument(env, "H5Awrite_int: buf does not support variable length type"); + } /* end else if */ + else { + PIN_INT_ARRAY(); + if (buffP == NULL) { + h5JNIFatalError(env, "H5Awrite_int: buf not pinned"); + } /* end if */ + else { + status = H5Awrite((hid_t)attr_id, (hid_t)mem_type_id, buffP); - wdata = (char**)HDcalloc((size_t)size + 1, sizeof(char*)); - if (!wdata) { - h5JNIFatalError(env, "H5AwriteVL_str: cannot allocate buffer"); + UNPIN_INT_ARRAY(JNI_ABORT); + + if (status < 0) + h5libraryError(env); + } /* end else */ + } /* end else */ + } /* end else */ + + return (jint)status; +} /* end Java_hdf_hdf5lib_H5_H5Awrite_1int */ + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Aread_long + * Signature: (JJ[JZ)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Aread_1long + (JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jlongArray buf, jboolean isCriticalPinning) +{ + herr_t status = -1; + jlong *buffP; + jboolean isCopy; + htri_t data_class; + + if (buf == NULL) { + h5nullArgument(env, "H5Aread_long: buf is NULL"); } /* end if */ + else if((data_class = H5Tdetect_class(mem_type_id, H5T_VLEN)) < 0) { + h5JNIFatalError(env, "H5Aread_long: H5Tdetect_class() failed"); + } /* end else if */ + else if(data_class == 1) { + h5badArgument(env, "H5Aread_long: buf does not support variable length type"); + } /* end else if */ else { - HDmemset(wdata, 0, (size_t)size * sizeof(char*)); - for (i = 0; i < size; ++i) { - jstring obj = (jstring) ENVPTR->GetObjectArrayElement(ENVPAR (jobjectArray) buf, i); - if (obj != 0) { - jsize length = ENVPTR->GetStringUTFLength(ENVPAR obj); - const char *utf8 = ENVPTR->GetStringUTFChars(ENVPAR obj, 0); + /* recursive detect any vlen string in type (compound, array ...) */ + if((data_class = H5Tdetect_variable_str(mem_type_id)) < 0) { + h5JNIFatalError(env, "H5Aread_long: H5Tdetect_variable_str() failed"); + } /* end if */ + else if(data_class == 1) { + h5badArgument(env, "H5Aread_long: buf does not support variable length type"); + } /* end else if */ + else { + PIN_LONG_ARRAY(); + if (buffP == NULL) { + h5JNIFatalError(env, "H5Aread_long: buf not pinned"); + } /* end if */ + else { + status = H5Aread((hid_t)attr_id, (hid_t)mem_type_id, buffP); - if (utf8) { - wdata[i] = (char*)HDmalloc((size_t)length + 1); - if (wdata[i]) { - HDmemset(wdata[i], 0, ((size_t)length + 1)); - HDstrncpy(wdata[i], utf8, (size_t)length); - } /* end if */ + if (status < 0) { + UNPIN_LONG_ARRAY(JNI_ABORT); + h5libraryError(env); } /* end if */ + else { + UNPIN_LONG_ARRAY(0); + } /* end else */ + } /* end else */ + } /* end else */ + } /* end else */ - ENVPTR->ReleaseStringUTFChars(ENVPAR obj, utf8); - ENVPTR->DeleteLocalRef(ENVPAR obj); + return (jint)status; +} /* end Java_hdf_hdf5lib_H5_H5Aread_1long */ + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Awrite_long + * Signature: (JJ[JZ)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Awrite_1long + (JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jlongArray buf, jboolean isCriticalPinning) +{ + herr_t status = -1; + jlong *buffP; + jboolean isCopy; + htri_t data_class; + + if (buf == NULL) { + h5nullArgument(env, "H5Awrite_long: buf is NULL"); + } /* end if */ + else if((data_class = H5Tdetect_class(mem_type_id, H5T_VLEN)) < 0) { + h5JNIFatalError(env, "H5Dwrite_long: H5Tdetect_class() failed"); + } /* end else if */ + else if(data_class == 1) { + h5badArgument(env, "H5Awrite_long: buf does not support variable length type"); + } /* end else if */ + else { + /* recursive detect any vlen string in type (compound, array ...) */ + if((data_class = H5Tdetect_variable_str(mem_type_id)) < 0) { + h5JNIFatalError(env, "H5Awrite_long: H5Tdetect_variable_str() failed"); + } /* end if */ + else if(data_class == 1) { + h5badArgument(env, "H5Awrite_long: buf does not support variable length type"); + } /* end else if */ + else { + PIN_LONG_ARRAY(); + if (buffP == NULL) { + h5JNIFatalError(env, "H5Awrite_long: buf not pinned"); } /* end if */ - } /* end for (i = 0; i < size; ++i) */ + else { + status = H5Awrite((hid_t)attr_id, (hid_t)mem_type_id, buffP); - status = H5Awrite((hid_t)aid, (hid_t)tid, wdata); + UNPIN_LONG_ARRAY(JNI_ABORT); + if (status < 0) + h5libraryError(env); + } /* end else */ + } /* end else */ + } /* end else */ - for (i = 0; i < size; i++) { - if(wdata[i]) { - HDfree(wdata[i]); + return (jint)status; +} /* end Java_hdf_hdf5lib_H5_H5Awrite_1long */ + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Aread_float + * Signature: (JJ[FZ)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Aread_1float + (JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jfloatArray buf, jboolean isCriticalPinning) +{ + herr_t status = -1; + jfloat *buffP; + jboolean isCopy; + htri_t data_class; + + if (buf == NULL) { + h5nullArgument(env, "H5Aread_float: buf is NULL"); + } /* end if */ + else if((data_class = H5Tdetect_class(mem_type_id, H5T_VLEN)) < 0) { + h5JNIFatalError(env, "H5Dread_float: H5Tdetect_class() failed"); + } /* end else if */ + else if(data_class == 1) { + h5badArgument(env, "H5Aread_float: buf does not support variable length type"); + } /* end else if */ + else { + /* recursive detect any vlen string in type (compound, array ...) */ + if((data_class = H5Tdetect_variable_str(mem_type_id)) < 0) { + h5JNIFatalError(env, "H5Aread_float: H5Tdetect_variable_str() failed"); + } /* end if */ + else if(data_class == 1) { + h5badArgument(env, "H5Aread_float: buf does not support variable length type"); + } /* end else if */ + else { + PIN_FLOAT_ARRAY(); + if (buffP == NULL) { + h5JNIFatalError(env, "H5Aread_float: buf not pinned"); } /* end if */ - } /* end for */ - HDfree(wdata); + else { + status = H5Aread((hid_t)attr_id, (hid_t)mem_type_id, buffP); - if (status < 0) - h5libraryError(env); + if (status < 0) { + UNPIN_FLOAT_ARRAY(JNI_ABORT); + h5libraryError(env); + } /* end if */ + else { + UNPIN_FLOAT_ARRAY(0); + } /* end else */ + } /* end else */ + } /* end else */ } /* end else */ return (jint)status; -} +} /* end Java_hdf_hdf5lib_H5_H5Aread_1float */ -herr_t -H5AwriteVL_asstr - (JNIEnv *env, hid_t aid, hid_t tid, jobjectArray buf) +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Awrite_float + * Signature: (JJ[FZ)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Awrite_1float + (JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jfloatArray buf, jboolean isCriticalPinning) { - char **strs; - jstring jstr; - jint i; - jint n; - hid_t sid; - hsize_t dims[H5S_MAX_RANK]; - herr_t status = -1; + herr_t status = -1; + jfloat *buffP; + jboolean isCopy; + htri_t data_class; - n = ENVPTR->GetArrayLength(ENVPAR buf); - strs =(hvl_t*)HDcalloc((size_t)n, sizeof(hvl_t)); + if (buf == NULL) { + h5nullArgument(env, "H5Awrite_float: buf is NULL"); + } /* end if */ + else if((data_class = H5Tdetect_class(mem_type_id, H5T_VLEN)) < 0) { + h5JNIFatalError(env, "H5Awrite_float: H5Tdetect_class() failed"); + } /* end else if */ + else if(data_class == 1) { + h5badArgument(env, "H5Awrite_float: buf does not support variable length type"); + } /* end else if */ + else { + /* recursive detect any vlen string in type (compound, array ...) */ + if((data_class = H5Tdetect_variable_str(mem_type_id)) < 0) { + h5JNIFatalError(env, "H5Awrite_float: H5Tdetect_variable_str() failed"); + } /* end if */ + else if(data_class == 1) { + h5badArgument(env, "H5Awrite_float: buf does not support variable length type"); + } /* end else if */ + else { + PIN_FLOAT_ARRAY(); + if (buffP == NULL) { + h5JNIFatalError(env, "H5Awrite_float: buf not pinned"); + } /* end if */ + else { + status = H5Awrite((hid_t)attr_id, (hid_t)mem_type_id, buffP); - if (strs == NULL) { - h5JNIFatalError(env, "H5AwriteVL_asstr: failed to allocate buff for read variable length strings"); + UNPIN_FLOAT_ARRAY(JNI_ABORT); + if (status < 0) + h5libraryError(env); + } /* end else */ + } /* end else */ + } /* end else */ + + return (jint)status; +} /* end Java_hdf_hdf5lib_H5_H5Awrite_1float */ + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Aread_double + * Signature: (JJ[DZ)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Aread_1double + (JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jdoubleArray buf, jboolean isCriticalPinning) +{ + herr_t status = -1; + jdouble *buffP; + jboolean isCopy; + htri_t data_class; + + if (buf == NULL) { + h5nullArgument(env, "H5Aread_double: buf is NULL"); } /* end if */ + else if((data_class = H5Tdetect_class(mem_type_id, H5T_VLEN)) < 0) { + h5JNIFatalError(env, "H5Aread_double: H5Tdetect_class() failed"); + } /* end else if */ + else if(data_class == 1) { + h5badArgument(env, "H5Aread_double: buf does not support variable length type"); + } /* end else if */ else { - status = H5Awrite(aid, tid, strs); + /* recursive detect any vlen string in type (compound, array ...) */ + if((data_class = H5Tdetect_variable_str(mem_type_id)) < 0) { + h5JNIFatalError(env, "H5Aread_double: H5Tdetect_variable_str() failed"); + } /* end if */ + else if(data_class == 1) { + h5badArgument(env, "H5Aread_double: buf does not support variable length type"); + } /* end else if */ + else { + PIN_DOUBLE_ARRAY(); + if (buffP == NULL) { + h5JNIFatalError(env, "H5Aread_double: buf not pinned"); + } /* end if */ + else { + status = H5Aread((hid_t)attr_id, (hid_t)mem_type_id, buffP); - if (status < 0) { - dims[0] = (hsize_t)n; - sid = H5Screate_simple(1, dims, NULL); - H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, strs); - H5Sclose(sid); - HDfree(strs); - h5JNIFatalError(env, "H5AwriteVL_str: failed to read variable length strings"); + if (status < 0) { + UNPIN_DOUBLE_ARRAY(JNI_ABORT); + h5libraryError(env); + } /* end if */ + else { + UNPIN_DOUBLE_ARRAY(0); + } /* end else */ + } /* end else */ + } /* end else */ + } /* end else */ + + return (jint)status; +} /* end Java_hdf_hdf5lib_H5_H5Aread_1double */ + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Awrite_double + * Signature: (JJ[DZ)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Awrite_1double + (JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jdoubleArray buf, jboolean isCriticalPinning) +{ + herr_t status = -1; + jdouble *buffP; + jboolean isCopy; + htri_t data_class; + + if (buf == NULL) { + h5nullArgument(env, "H5Awrite_double: buf is NULL"); + } /* end if */ + else if((data_class = H5Tdetect_class(mem_type_id, H5T_VLEN)) < 0) { + h5JNIFatalError(env, "H5Awrite_double: H5Tdetect_class() failed"); + } /* end else if */ + else if(data_class == 1) { + h5badArgument(env, "H5Awrite_double: buf does not support variable length type"); + } /* end else if */ + else { + /* recursive detect any vlen string in type (compound, array ...) */ + if((data_class = H5Tdetect_variable_str(mem_type_id)) < 0) { + h5JNIFatalError(env, "H5Awrite_double: H5Tdetect_variable_str() failed"); } /* end if */ + else if(data_class == 1) { + h5badArgument(env, "H5Awrite_double: buf does not support variable length type"); + } /* end else if */ else { - for (i=0; i < n; i++) { - jstr = ENVPTR->NewStringUTF(ENVPAR strs[i]); - ENVPTR->SetObjectArrayElement(ENVPAR buf, i, jstr); - H5free_memory (strs[i]); + PIN_DOUBLE_ARRAY(); + if (buffP == NULL) { + h5JNIFatalError(env, "H5Awrite_double: buf not pinned"); + } /* end if */ + else { + status = H5Awrite((hid_t)attr_id, (hid_t)mem_type_id, buffP); + + UNPIN_DOUBLE_ARRAY(JNI_ABORT); + if (status < 0) + h5libraryError(env); + } /* end else */ + } /* end else */ + } /* end else */ + + return (jint)status; +} /* end Java_hdf_hdf5lib_H5_H5Awrite_1double */ + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Aread_string + * Signature: (JJ[Ljava/lang/String;)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Aread_1string + (JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jobjectArray j_buf) +{ + herr_t status = -1; + char *c_buf; + char *cstr; + size_t str_len; + jsize i; + jsize n; + size_t pos; + jstring jstr; + + c_buf = cstr = NULL; + if (j_buf == NULL) { + h5nullArgument(env, "H5Aread_string: buf is NULL"); + } /* end if */ + else if ((n = ENVPTR->GetArrayLength(ENVPAR j_buf)) <= 0) { + h5nullArgument(env, "H5Aread_string: buf length <= 0"); + } /* end else if */ + else if ((str_len = H5Tget_size((hid_t)mem_type_id)) <=0) { + h5libraryError(env); + } /* end else if */ + else { + if ((cstr = (char*)HDmalloc(str_len + 1)) == NULL) { + h5JNIFatalError(env, "H5Aread_string: memory allocation failed."); + } /* end if */ + else { + if ((c_buf = (char*)HDmalloc((size_t)n * str_len)) == NULL) { + if (cstr) + HDfree(cstr); + cstr = NULL; + h5JNIFatalError(env, "H5Aread_string: memory allocation failed."); + } /* end if */ + else { + status = H5Aread((hid_t)attr_id, (hid_t)mem_type_id, c_buf); + + if (status < 0) { + if (cstr) + HDfree(cstr); + cstr = NULL; + if (c_buf) + HDfree(c_buf); + c_buf = NULL; + h5libraryError(env); + } /* end if */ + else { + pos = 0; + for (i = 0; i < n; i++) { + HDmemcpy(cstr, c_buf+pos, str_len); + cstr[str_len] = '\0'; + jstr = ENVPTR->NewStringUTF(ENVPAR cstr); + ENVPTR->SetObjectArrayElement(ENVPAR j_buf, i, jstr); + pos += str_len; + } /* end for */ + } /* end else */ + + if (c_buf) + HDfree(c_buf); + } /* end else cbuf allocation*/ + + if (cstr) + HDfree(cstr); + } /* end else cstr allocation*/ + } /* end else */ + + return (jint)status; +} /* end Java_hdf_hdf5lib_H5_H5Aread_1string */ + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Awrite_string + * Signature: (JJ[Ljava/lang/String;)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Awrite_1string + (JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jobjectArray j_buf) +{ + herr_t status = -1; + char *c_buf; + jsize str_len; + jsize i; + jsize n; + + if (j_buf == NULL) { + h5nullArgument(env, "H5Awrite_string: buf is NULL"); + } /* end if */ + else if ((n = ENVPTR->GetArrayLength(ENVPAR j_buf)) <= 0) { + h5nullArgument(env, "H5Awrite_string: buf length <= 0"); + } /* end else if */ + else if ((str_len = (jsize)H5Tget_size((hid_t)mem_type_id)) <=0) { + h5libraryError(env); + } /* end else if */ + else { + if ((c_buf = (char*)HDmalloc((size_t)n * (size_t)str_len)) == NULL) { + h5JNIFatalError(env, "H5Awrite_string: memory allocation failed."); + } /* end if */ + else { + for (i = 0; i < n; i++) { + jstring obj = (jstring)ENVPTR->GetObjectArrayElement(ENVPAR (jobjectArray)j_buf, i); + if (obj != 0) { + jsize length = ENVPTR->GetStringUTFLength(ENVPAR obj); + const char *utf8 = ENVPTR->GetStringUTFChars(ENVPAR obj, 0); + + if (utf8) { + HDstrncpy(&c_buf[i * str_len], utf8, str_len); + } /* end if */ + + ENVPTR->ReleaseStringUTFChars(ENVPAR obj, utf8); + ENVPTR->DeleteLocalRef(ENVPAR obj); + } /* end if */ } /* end for */ - /* - for repeatedly reading a dataset with a large number of strs (e.g., 1,000,000 strings, - H5Dvlen_reclaim() may crash on Windows because the Java GC will not be able to collect - free space in time. Instead, use "H5free_memory(strs[i])" above to free individual strings - after it is done. - H5Dvlen_reclaim(tid, mem_sid, xfer_plist_id, strs); - */ + status = H5Awrite((hid_t)attr_id, (hid_t)mem_type_id, c_buf); - HDfree(strs); + if (c_buf) + HDfree(c_buf); + c_buf = NULL; + + if (status < 0) { + h5libraryError(env); + } /* end if */ } /* end else */ } /* end else */ - return status; -} /* end H5AwriteVL_str */ + return (jint)status; +} /* end Java_hdf_hdf5lib_H5_H5Awrite_1string */ /* * Class: hdf_hdf5lib_H5 * Method: H5AreadVL - * Signature: (JJJJJ[Ljava/lang/String;)I + * Signature: (JJ[Ljava/lang/String;)I */ JNIEXPORT jint JNICALL Java_hdf_hdf5lib_H5_H5AreadVL @@ -519,6 +1163,206 @@ H5AreadVL_str /* * Class: hdf_hdf5lib_H5 + * Method: H5AwriteVL + * Signature: (JJ[Ljava/lang/String;)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5AwriteVL + (JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jobjectArray buf) +{ + herr_t status = -1; + htri_t isStr = 0; + htri_t isVlenStr = 0; + htri_t isComplex = 0; + + if (buf == NULL) { + h5nullArgument(env, "H5AwriteVL: buf is NULL"); + } /* end if */ + else { + isStr = H5Tdetect_class((hid_t)mem_type_id, H5T_STRING); + if (H5Tget_class((hid_t)mem_type_id) == H5T_COMPOUND) { + unsigned i; + int nm = H5Tget_nmembers(mem_type_id); + for(i = 0; i <nm; i++) { + hid_t nested_tid = H5Tget_member_type((hid_t)mem_type_id, i); + isComplex = H5Tdetect_class((hid_t)nested_tid, H5T_COMPOUND) || + H5Tdetect_class((hid_t)nested_tid, H5T_VLEN); + H5Tclose(nested_tid); + } + } + else if (H5Tget_class((hid_t)mem_type_id) == H5T_VLEN) { + isVlenStr = 1; /* strings created by H5Tvlen_create(H5T_C_S1) */ + } + if (isStr == 0 || isComplex>0 || isVlenStr) { + status = H5AwriteVL_asstr(env, (hid_t)attr_id, (hid_t)mem_type_id, buf); + } + else if (isStr > 0) { + status = H5AwriteVL_str(env, (hid_t)attr_id, (hid_t)mem_type_id, buf); + } + } /* end else */ + + return (jint)status; +} /* end Java_hdf_hdf5lib_H5_H5Awrite_1VL */ + +herr_t +H5AwriteVL_str + (JNIEnv *env, hid_t aid, hid_t tid, jobjectArray buf) +{ + herr_t status = -1; + char **wdata; + jsize size; + jint i; + + size = ENVPTR->GetArrayLength(ENVPAR (jarray) buf); + + wdata = (char**)HDcalloc((size_t)size + 1, sizeof(char*)); + if (!wdata) { + h5JNIFatalError(env, "H5AwriteVL_str: cannot allocate buffer"); + } /* end if */ + else { + HDmemset(wdata, 0, (size_t)size * sizeof(char*)); + for (i = 0; i < size; ++i) { + jstring obj = (jstring) ENVPTR->GetObjectArrayElement(ENVPAR (jobjectArray) buf, i); + if (obj != 0) { + jsize length = ENVPTR->GetStringUTFLength(ENVPAR obj); + const char *utf8 = ENVPTR->GetStringUTFChars(ENVPAR obj, 0); + + if (utf8) { + wdata[i] = (char*)HDmalloc((size_t)length + 1); + if (wdata[i]) { + HDmemset(wdata[i], 0, ((size_t)length + 1)); + HDstrncpy(wdata[i], utf8, (size_t)length); + } /* end if */ + } /* end if */ + + ENVPTR->ReleaseStringUTFChars(ENVPAR obj, utf8); + ENVPTR->DeleteLocalRef(ENVPAR obj); + } /* end if */ + } /* end for (i = 0; i < size; ++i) */ + + status = H5Awrite((hid_t)aid, (hid_t)tid, wdata); + + for (i = 0; i < size; i++) { + if(wdata[i]) { + HDfree(wdata[i]); + } /* end if */ + } /* end for */ + HDfree(wdata); + + if (status < 0) + h5libraryError(env); + } /* end else */ + + return (jint)status; +} + +herr_t +H5AwriteVL_asstr + (JNIEnv *env, hid_t aid, hid_t tid, jobjectArray buf) +{ + char **strs; + jstring jstr; + jint i; + jint n; + hid_t sid; + hsize_t dims[H5S_MAX_RANK]; + herr_t status = -1; + + n = ENVPTR->GetArrayLength(ENVPAR buf); + strs =(hvl_t*)HDcalloc((size_t)n, sizeof(hvl_t)); + + if (strs == NULL) { + h5JNIFatalError(env, "H5AwriteVL_asstr: failed to allocate buff for read variable length strings"); + } /* end if */ + else { + status = H5Awrite(aid, tid, strs); + + if (status < 0) { + dims[0] = (hsize_t)n; + sid = H5Screate_simple(1, dims, NULL); + H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, strs); + H5Sclose(sid); + HDfree(strs); + h5JNIFatalError(env, "H5AwriteVL_str: failed to read variable length strings"); + } /* end if */ + else { + for (i=0; i < n; i++) { + jstr = ENVPTR->NewStringUTF(ENVPAR strs[i]); + ENVPTR->SetObjectArrayElement(ENVPAR buf, i, jstr); + H5free_memory (strs[i]); + } /* end for */ + + /* + for repeatedly reading a dataset with a large number of strs (e.g., 1,000,000 strings, + H5Dvlen_reclaim() may crash on Windows because the Java GC will not be able to collect + free space in time. Instead, use "H5free_memory(strs[i])" above to free individual strings + after it is done. + H5Dvlen_reclaim(tid, mem_sid, xfer_plist_id, strs); + */ + + HDfree(strs); + } /* end else */ + } /* end else */ + + return status; +} /* end H5AwriteVL_str */ + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Aread_reg_ref + * Signature: (JJ[Ljava/lang/String;)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Aread_1reg_1ref + (JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jobjectArray buf) +{ + herr_t status = -1; + h5str_t h5str; + size_t size; + hdset_reg_ref_t *ref_data; + jint i; + jint n; + jstring jstr; + + hid_t region = -1; + hid_t aid = (hid_t) attr_id; + hid_t tid = (hid_t) mem_type_id; + + n = ENVPTR->GetArrayLength(ENVPAR buf); + size = sizeof(hdset_reg_ref_t); /*H5Tget_size(tid);*/ + ref_data = (hdset_reg_ref_t*)HDmalloc(size * (size_t)n); + + if (ref_data == NULL) { + h5JNIFatalError(env, "H5Aread_reg_ref: failed to allocate buff for read"); + return -1; + } /* end if */ + + status = H5Aread(aid, tid, ref_data); + + if (status < 0) { + HDfree(ref_data); + h5JNIFatalError(env, "H5Aread_reg_ref: failed to read data"); + return -1; + } /* end if */ + + HDmemset(&h5str, 0, sizeof(h5str_t)); + h5str_new(&h5str, 1024); + for (i=0; i<n; i++) { + h5str.s[0] = '\0'; + h5str_sprintf(&h5str, aid, tid, ref_data[i], 0, 0); + jstr = ENVPTR->NewStringUTF(ENVPAR h5str.s); + + ENVPTR->SetObjectArrayElement(ENVPAR buf, i, jstr); + } /* end for */ + + h5str_free(&h5str); + HDfree(ref_data); + + return (jint)status; +} /* end Java_hdf_hdf5lib_H5_H5Aread_1reg_1ref */ + +/* + * Class: hdf_hdf5lib_H5 * Method: H5Aget_space * Signature: (J)J */ diff --git a/java/src/jni/h5aImp.h b/java/src/jni/h5aImp.h index f3758eb..15cc83e 100644 --- a/java/src/jni/h5aImp.h +++ b/java/src/jni/h5aImp.h @@ -51,21 +51,120 @@ Java_hdf_hdf5lib_H5__1H5Aopen_1idx /* * Class: hdf_hdf5lib_H5 + * Method: H5Aread + * Signature: (JJ[B)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Aread + (JNIEnv *, jclass, jlong, jlong, jbyteArray, jboolean); + +/* + * Class: hdf_hdf5lib_H5 * Method: H5Awrite * Signature: (JJ[B)I */ JNIEXPORT jint JNICALL Java_hdf_hdf5lib_H5_H5Awrite - (JNIEnv *, jclass, jlong, jlong, jbyteArray); + (JNIEnv *, jclass, jlong, jlong, jbyteArray, jboolean); /* * Class: hdf_hdf5lib_H5 - * Method: H5Aread - * Signature: (JJ[B)I + * Method: H5Aread_short + * Signature: (JJ[SZ)I */ JNIEXPORT jint JNICALL -Java_hdf_hdf5lib_H5_H5Aread - (JNIEnv *, jclass, jlong, jlong, jbyteArray); +Java_hdf_hdf5lib_H5_H5Aread_1short + (JNIEnv*, jclass, jlong, jlong, jshortArray, jboolean); + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Awrite_short + * Signature: (JJ[SZ)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Awrite_1short + (JNIEnv*, jclass, jlong, jlong, jshortArray, jboolean); + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Aread_int + * Signature: (JJ[IZ)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Aread_1int + (JNIEnv*, jclass, jlong, jlong, jintArray, jboolean); + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Awrite_int + * Signature: (JJ[IZ)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Awrite_1int + (JNIEnv*, jclass, jlong, jlong, jintArray, jboolean); + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Aread_long + * Signature: (JJ[JZ)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Aread_1long + (JNIEnv*, jclass, jlong, jlong, jlongArray, jboolean); + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Awrite_long + * Signature: (JJ[JZ)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Awrite_1long + (JNIEnv*, jclass, jlong, jlong, jlongArray, jboolean); + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Aread_float + * Signature: (JJ[FZ)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Aread_1float + (JNIEnv*, jclass, jlong, jlong, jfloatArray, jboolean); + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Awrite_float + * Signature: (JJ[FZ)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Awrite_1float + (JNIEnv*, jclass, jlong, jlong, jfloatArray, jboolean); + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Aread_double + * Signature: (JJ[DZ)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Aread_1double + (JNIEnv*, jclass, jlong, jlong, jdoubleArray, jboolean); + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Awrite_double + * Signature: (JJ[DZ)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Awrite_1double + (JNIEnv*, jclass, jlong, jlong, jdoubleArray, jboolean); + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5AreadVL + * Signature: (JJ[Ljava/lang/String;)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5AreadVL + (JNIEnv *, jclass, jlong, jlong, jobjectArray); /* * Class: hdf_hdf5lib_H5 @@ -78,12 +177,48 @@ Java_hdf_hdf5lib_H5_H5AwriteVL /* * Class: hdf_hdf5lib_H5 - * Method: H5AreadVL + * Method: H5Aread_string * Signature: (JJ[Ljava/lang/String;)I */ JNIEXPORT jint JNICALL -Java_hdf_hdf5lib_H5_H5AreadVL - (JNIEnv *, jclass, jlong, jlong, jobjectArray); +Java_hdf_hdf5lib_H5_H5Aread_1string + (JNIEnv*, jclass, jlong, jlong, jobjectArray); + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Awrite_string + * Signature: (JJ[Ljava/lang/String;)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Awrite_1string +(JNIEnv*, jclass, jlong, jlong, jobjectArray); + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Aread_VLStrings + * Signature: (JJ[Ljava/lang/String;)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Aread_1VLStrings +(JNIEnv*, jclass, jlong, jlong, jobjectArray); + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Awrite_VLStrings + * Signature: (JJ[B)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Awrite_1VLStrings + (JNIEnv*, jclass, jlong, jlong, jobjectArray); + +/* + * Class: hdf_hdf5lib_H5 + * Method: H5Aread_reg_ref + * Signature: (JJ[Ljava/lang/String;)I + */ +JNIEXPORT jint JNICALL +Java_hdf_hdf5lib_H5_H5Aread_1reg_1ref +(JNIEnv*, jclass, jlong, jlong, jobjectArray); /* * Class: hdf_hdf5lib_H5 diff --git a/java/src/jni/h5dImp.c b/java/src/jni/h5dImp.c index 652c873..79a5d0a 100644 --- a/java/src/jni/h5dImp.c +++ b/java/src/jni/h5dImp.c @@ -1574,84 +1574,6 @@ Java_hdf_hdf5lib_H5_H5Dread_1reg_1ref /* * Class: hdf_hdf5lib_H5 - * Method: H5Dread_reg_ref_data - * Signature: (JJJJJ[Ljava/lang/String;)I - */ -JNIEXPORT jint JNICALL -Java_hdf_hdf5lib_H5_H5Dread_1reg_1ref_1data - (JNIEnv *env, jclass clss, - jlong dataset_id, jlong mem_type_id, jlong mem_space_id, - jlong file_space_id, jlong xfer_plist_id, jobjectArray buf) -{ - herr_t status = -1; - h5str_t h5str; - size_t size; - hdset_reg_ref_t *ref_data; - jint i; - jint n; - jstring jstr; - - hid_t region_obj; - H5S_sel_type region_type; - - hid_t region = -1; - hid_t did = (hid_t) dataset_id; - hid_t tid = (hid_t) mem_type_id; - hid_t mem_sid = (hid_t) mem_space_id; - hid_t file_sid = (hid_t) file_space_id; - - n = ENVPTR->GetArrayLength(ENVPAR buf); - size = sizeof(hdset_reg_ref_t); /*H5Tget_size(tid);*/ - ref_data = (hdset_reg_ref_t*)HDmalloc(size * (size_t)n); - - if (ref_data == NULL) { - h5JNIFatalError(env, "H5Dread_reg_ref_data: failed to allocate buff for read"); - return -1; - } /* end if */ - - status = H5Dread(did, tid, mem_sid, file_sid, xfer_plist_id, ref_data); - - if (status < 0) { - HDfree(ref_data); - h5JNIFatalError(env, "H5Dread_reg_ref_data: failed to read data"); - return -1; - } /* end if */ - - HDmemset(&h5str, 0, sizeof(h5str_t)); - h5str_new(&h5str, 1024); - for (i=0; i<n; i++) { - h5str.s[0] = '\0'; - - /* get name of the dataset the region reference points to using H5Rget_name */ - region_obj = H5Rdereference2(did, H5P_DEFAULT, H5R_DATASET_REGION, ref_data[i]); - if (region_obj >= 0) { - region = H5Rget_region(did, H5R_DATASET_REGION, ref_data[i]); - if (region >= 0) { - region_type = H5Sget_select_type(region); - if(region_type==H5S_SEL_POINTS) { - h5str_dump_region_points_data(&h5str, region, region_obj); - } /* end if */ - else { - h5str_dump_region_blocks_data(&h5str, region, region_obj); - } /* end else */ - - H5Sclose(region); - } /* end if */ - H5Dclose(region_obj); - } /* end if */ - jstr = ENVPTR->NewStringUTF(ENVPAR h5str.s); - - ENVPTR->SetObjectArrayElement(ENVPAR buf, i, jstr); - } /* end for */ - - h5str_free(&h5str); - HDfree(ref_data); - - return (jint)status; -} /* end Java_hdf_hdf5lib_H5_H5Dread_1reg_1ref_1data */ - -/* - * Class: hdf_hdf5lib_H5 * Method: _H5Dcreate2 * Signature: (JLjava/lang/String;JJJJJ)J */ diff --git a/java/src/jni/h5dImp.h b/java/src/jni/h5dImp.h index 1fe71a8..f824452 100644 --- a/java/src/jni/h5dImp.h +++ b/java/src/jni/h5dImp.h @@ -250,7 +250,7 @@ Java_hdf_hdf5lib_H5_H5Dread_1VLStrings /* * Class: hdf_hdf5lib_H5 * Method: H5Dwrite_VLStrings - * Signature: (JJJJJ[BZ)I + * Signature: (JJJJJ[B)I */ JNIEXPORT jint JNICALL Java_hdf_hdf5lib_H5_H5Dwrite_1VLStrings @@ -267,15 +267,6 @@ Java_hdf_hdf5lib_H5_H5Dread_1reg_1ref /* * Class: hdf_hdf5lib_H5 - * Method: H5Dread_reg_ref_data - * Signature: (JJJJJ[Ljava/lang/String;)I - */ -JNIEXPORT jint JNICALL -Java_hdf_hdf5lib_H5_H5Dread_1reg_1ref_1data - (JNIEnv*, jclass, jlong, jlong, jlong, jlong, jlong, jobjectArray); - -/* - * Class: hdf_hdf5lib_H5 * Method: _H5Dcreate2 * Signature: (JLjava/lang/String;JJJJJ)J */ diff --git a/java/src/jni/h5fImp.c b/java/src/jni/h5fImp.c index 9d68290..248e654 100644 --- a/java/src/jni/h5fImp.c +++ b/java/src/jni/h5fImp.c @@ -168,6 +168,33 @@ Java_hdf_hdf5lib_H5_H5Fis_1hdf5 /* * Class: hdf_hdf5lib_H5 + * Method: H5Fis_accessible + * Signature: (Ljava/lang/String;J)Z + */ +JNIEXPORT jboolean JNICALL +Java_hdf_hdf5lib_H5_H5Fis_1accessible + (JNIEnv *env, jclass clss, jstring name, jlong file_id) +{ + htri_t bval = JNI_FALSE; + const char *fileName; + + PIN_JAVA_STRING(name, fileName); + if (fileName != NULL) { + bval = H5Fis_accessible(fileName, (hid_t)file_id); + + UNPIN_JAVA_STRING(name, fileName); + + if (bval > 0) + bval = JNI_TRUE; + else if (bval < 0) + h5libraryError(env); + } + + return (jboolean)bval; +} /* end Java_hdf_hdf5lib_H5_H5Fis_1accessible */ + +/* + * Class: hdf_hdf5lib_H5 * Method: H5Fget_create_plist * Signature: (J)J */ @@ -177,7 +204,7 @@ Java_hdf_hdf5lib_H5__1H5Fget_1create_1plist { hid_t retVal = -1; - retVal = H5Fget_create_plist((hid_t)file_id ); + retVal = H5Fget_create_plist((hid_t)file_id); if (retVal < 0) h5libraryError(env); diff --git a/java/src/jni/h5fImp.h b/java/src/jni/h5fImp.h index fcfdedf..af0fa1d 100644 --- a/java/src/jni/h5fImp.h +++ b/java/src/jni/h5fImp.h @@ -68,6 +68,15 @@ Java_hdf_hdf5lib_H5_H5Fis_1hdf5 /* * Class: hdf_hdf5lib_H5 + * Method: H5Fis_accessible + * Signature: (Ljava/lang/String;J)Z + */ +JNIEXPORT jboolean JNICALL +Java_hdf_hdf5lib_H5_H5Fis_1ccessible + (JNIEnv*, jclass, jstring, jlong); + +/* + * Class: hdf_hdf5lib_H5 * Method: H5Fget_create_plist * Signature: (J)J */ diff --git a/java/test/TestH5Fbasic.java b/java/test/TestH5Fbasic.java index 11d6644..a5afb6e 100644 --- a/java/test/TestH5Fbasic.java +++ b/java/test/TestH5Fbasic.java @@ -81,6 +81,19 @@ public class TestH5Fbasic { assertTrue(isH5 == true); } + @Test + public void testH5Fis_accessible() { + boolean isH5 = false; + + try { + isH5 = H5.H5Fis_accessible(H5_FILE, HDF5Constants.H5P_DEFAULT); + } + catch (Throwable err) { + fail("H5.H5Fis_accessible failed on " + H5_FILE + ": " + err); + } + assertTrue(isH5 == true); + } + @Test(expected = HDF5LibraryException.class) public void testH5Fcreate_EXCL() throws Throwable { H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_EXCL, diff --git a/java/test/TestH5Fparams.java b/java/test/TestH5Fparams.java index fffded1..3d64aa9 100644 --- a/java/test/TestH5Fparams.java +++ b/java/test/TestH5Fparams.java @@ -60,6 +60,11 @@ public class TestH5Fparams { } @Test(expected = NullPointerException.class) + public void testH5Fis_accessible_null() throws Throwable { + H5.H5Fis_accessible(null, -1); + } + + @Test(expected = NullPointerException.class) public void testH5Fmount_null() throws Throwable { H5.H5Fmount(-1, null, -1, HDF5Constants.H5P_DEFAULT); } diff --git a/java/test/testfiles/JUnit-TestH5Edefault.txt b/java/test/testfiles/JUnit-TestH5Edefault.txt index 71d1431..48c6254 100644 --- a/java/test/testfiles/JUnit-TestH5Edefault.txt +++ b/java/test/testfiles/JUnit-TestH5Edefault.txt @@ -38,17 +38,20 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): minor: Unable to open file #001: (file name) line (number) in H5VL_file_open(): open failed major: Virtual Object Layer - minor: Unable to initialize object - #002: (file name) line (number) in H5VL_native_file_open(): unable to open file + minor: Can't open object + #002: (file name) line (number) in H5VL__file_open(): open failed + major: Virtual Object Layer + minor: Can't open object + #003: (file name) line (number) in H5VL__native_file_open(): unable to open file major: File accessibility minor: Unable to open file - #003: (file name) line (number) in H5F_open(): unable to open file: name = 'test', tent_flags = 1 + #004: (file name) line (number) in H5F_open(): unable to open file: name = 'test', tent_flags = 1 major: File accessibility minor: Unable to open file - #004: (file name) line (number) in H5FD_open(): open failed + #005: (file name) line (number) in H5FD_open(): open failed major: Virtual File Layer minor: Unable to initialize object - #005: (file name) line (number) in H5FD_sec2_open(): unable to open file: name = 'test', errno = 2, error message = 'No such file or directory', flags = 1, o_flags = 2 + #006: (file name) line (number) in H5FD_sec2_open(): unable to open file: name = 'test', errno = 2, error message = 'No such file or directory', flags = 1, o_flags = 2 major: File accessibility minor: Unable to open file HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): @@ -57,16 +60,19 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): minor: Unable to open file #001: (file name) line (number) in H5VL_file_open(): open failed major: Virtual Object Layer - minor: Unable to initialize object - #002: (file name) line (number) in H5VL_native_file_open(): unable to open file + minor: Can't open object + #002: (file name) line (number) in H5VL__file_open(): open failed + major: Virtual Object Layer + minor: Can't open object + #003: (file name) line (number) in H5VL__native_file_open(): unable to open file major: File accessibility minor: Unable to open file - #003: (file name) line (number) in H5F_open(): unable to open file: name = 'test', tent_flags = 1 + #004: (file name) line (number) in H5F_open(): unable to open file: name = 'test', tent_flags = 1 major: File accessibility minor: Unable to open file - #004: (file name) line (number) in H5FD_open(): open failed + #005: (file name) line (number) in H5FD_open(): open failed major: Virtual File Layer minor: Unable to initialize object - #005: (file name) line (number) in H5FD_sec2_open(): unable to open file: name = 'test', errno = 2, error message = 'No such file or directory', flags = 1, o_flags = 2 + #006: (file name) line (number) in H5FD_sec2_open(): unable to open file: name = 'test', errno = 2, error message = 'No such file or directory', flags = 1, o_flags = 2 major: File accessibility minor: Unable to open file diff --git a/java/test/testfiles/JUnit-TestH5Fbasic.txt b/java/test/testfiles/JUnit-TestH5Fbasic.txt index 467e2fb..2654624 100644 --- a/java/test/testfiles/JUnit-TestH5Fbasic.txt +++ b/java/test/testfiles/JUnit-TestH5Fbasic.txt @@ -9,6 +9,7 @@ JUnit version 4.11 .testH5Freopen_closed .testH5Freset_mdc_hit_rate_stats .testH5Fget_name +.testH5Fis_accessible .testH5Fcreate .testH5Fclear_elink_file_cache .testH5Fclose_twice @@ -17,5 +18,5 @@ JUnit version 4.11 Time: XXXX -OK (15 tests) +OK (16 tests) diff --git a/java/test/testfiles/JUnit-TestH5Fparams.txt b/java/test/testfiles/JUnit-TestH5Fparams.txt index 9d35220..e91cbdc 100644 --- a/java/test/testfiles/JUnit-TestH5Fparams.txt +++ b/java/test/testfiles/JUnit-TestH5Fparams.txt @@ -1,4 +1,5 @@ JUnit version 4.11 +.testH5Fis_accessible_null .testH5Fcreate_null .testH5Fflush_local .testH5Fget_info @@ -13,5 +14,5 @@ JUnit version 4.11 Time: XXXX -OK (11 tests) +OK (12 tests) diff --git a/release_docs/RELEASE.txt b/release_docs/RELEASE.txt index 0df856f..024db9a 100644 --- a/release_docs/RELEASE.txt +++ b/release_docs/RELEASE.txt @@ -48,6 +48,15 @@ New Features Configuration: ------------- + - Keep stderr and stdout separate in tests + + Changed test handling of output capture. Tests now keep the stderr + output separate from the stdout output. It is up to the test to decide + which output to check against a reference. Also added the option + to grep for a string in either output. + + (ADB - 2018/12/12, HDFFV-10632) + - Add toolchain and cross-compile support Added info on using a toolchain file to INSTALL_CMAKE.txt. A @@ -110,7 +119,7 @@ New Features (ADB - 2018/07/16) - + Library: -------- - Allow pre-generated H5Tinit.c and H5make_libsettings.c to be used. @@ -187,6 +196,15 @@ New Features Java Library: ---------------- + - Duplicate the data read/write functions of Datasets for Attributes. + + Region references could not be displayed for attributes as they could + for datasets. Datasets had overloaded read and write functions for different + datatypes that were not available for attributes. After adding similar + functions, attribute region references work normally. + + (ADB - 2018/12/12, HDFVIEW-4) + - Removed H5I_REFERENCE from the Java wrappers @@ -299,9 +317,9 @@ Bug Fixes since HDF5-1.10.3 release - Made Fortran specific subroutines PRIVATE in generic procedures. Effected generic procedures were functions in H5A, H5D, H5P, H5R and H5T. - + (MSB, 2018/12/04, HDFFV-10511) - + Tools ----- - diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt index cd81ba5..778505f 100644 --- a/src/CMakeLists.txt +++ b/src/CMakeLists.txt @@ -950,10 +950,13 @@ if (NOT EXISTS ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c) ) add_custom_command ( OUTPUT ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c + ${HDF5_GENERATED_SOURCE_DIR}/gen_SRCS.stamp1 COMMAND ${HDF5_BATCH_CMD} ARGS ${HDF5_BINARY_DIR}/${HDF5_BATCH_H5DETECT_SCRIPT} COMMAND ${CMAKE_COMMAND} ARGS -E echo "Executed batch command to create H5Tinit.c" + COMMAND ${CMAKE_COMMAND} + ARGS -E touch ${HDF5_GENERATED_SOURCE_DIR}/gen_SRCS.stamp1 DEPENDS H5detect WORKING_DIRECTORY ${HDF5_GENERATED_SOURCE_DIR} ) @@ -963,31 +966,62 @@ if (NOT EXISTS ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c) if (BUILD_SHARED_LIBS) add_custom_command ( OUTPUT ${HDF5_GENERATED_SOURCE_DIR}/shared/H5Tinit.c + ${HDF5_GENERATED_SOURCE_DIR}/shared/shared_gen_SRCS.stamp1 COMMAND ${CMAKE_COMMAND} ARGS -E copy_if_different "${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c" "${HDF5_GENERATED_SOURCE_DIR}/shared/H5Tinit.c" + COMMAND ${CMAKE_COMMAND} + ARGS -E touch ${HDF5_GENERATED_SOURCE_DIR}/shared/shared_gen_SRCS.stamp1 DEPENDS gen_H5Tinit ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit_created + WORKING_DIRECTORY ${HDF5_GENERATED_SOURCE_DIR} ) set_source_files_properties (${HDF5_GENERATED_SOURCE_DIR}/shared/H5Tinit.c PROPERTIES GENERATED TRUE) endif () else () add_custom_command ( OUTPUT ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c + ${HDF5_GENERATED_SOURCE_DIR}/gen_SRCS.stamp1 COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR}$<TARGET_FILE:H5detect> ARGS ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c + COMMAND ${CMAKE_COMMAND} + ARGS -E touch ${HDF5_GENERATED_SOURCE_DIR}/gen_SRCS.stamp1 DEPENDS H5detect WORKING_DIRECTORY ${HDF5_GENERATED_SOURCE_DIR} ) if (BUILD_SHARED_LIBS) add_custom_command ( OUTPUT ${HDF5_GENERATED_SOURCE_DIR}/shared/H5Tinit.c + ${HDF5_GENERATED_SOURCE_DIR}/shared/shared_gen_SRCS.stamp1 COMMAND ${CMAKE_COMMAND} ARGS -E copy_if_different "${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c" "${HDF5_GENERATED_SOURCE_DIR}/shared/H5Tinit.c" + COMMAND ${CMAKE_COMMAND} + ARGS -E touch ${HDF5_GENERATED_SOURCE_DIR}/shared/shared_gen_SRCS.stamp1 DEPENDS ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c + WORKING_DIRECTORY ${HDF5_GENERATED_SOURCE_DIR} ) set_source_files_properties (${HDF5_GENERATED_SOURCE_DIR}/shared/H5Tinit.c PROPERTIES GENERATED TRUE) endif () endif () set_source_files_properties (${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c PROPERTIES GENERATED TRUE) +else () + add_custom_command ( + OUTPUT ${HDF5_GENERATED_SOURCE_DIR}/gen_SRCS.stamp1 + COMMAND ${CMAKE_COMMAND} + ARGS -E touch ${HDF5_GENERATED_SOURCE_DIR}/gen_SRCS.stamp1 + DEPENDS ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c + WORKING_DIRECTORY ${HDF5_GENERATED_SOURCE_DIR} + ) + if (BUILD_SHARED_LIBS) + add_custom_command ( + OUTPUT ${HDF5_GENERATED_SOURCE_DIR}/shared/shared_gen_SRCS.stamp1 + COMMAND ${CMAKE_COMMAND} + ARGS -E copy_if_different "${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c" "${HDF5_GENERATED_SOURCE_DIR}/shared/H5Tinit.c" + COMMAND ${CMAKE_COMMAND} + ARGS -E touch ${HDF5_GENERATED_SOURCE_DIR}/shared/shared_gen_SRCS.stamp1 + DEPENDS ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c + WORKING_DIRECTORY ${HDF5_GENERATED_SOURCE_DIR} + ) + set_source_files_properties (${HDF5_GENERATED_SOURCE_DIR}/shared/H5Tinit.c PROPERTIES GENERATED TRUE) + endif () endif () add_executable (H5make_libsettings ${HDF5_SRC_DIR}/H5make_libsettings.c) @@ -1001,8 +1035,11 @@ target_link_libraries (H5make_libsettings add_custom_command ( OUTPUT ${HDF5_BINARY_DIR}/H5lib_settings.c + ${HDF5_BINARY_DIR}/gen_SRCS.stamp2 COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR}$<TARGET_FILE:H5make_libsettings> ARGS ${HDF5_BINARY_DIR}/H5lib_settings.c + COMMAND ${CMAKE_COMMAND} + ARGS -E touch ${HDF5_GENERATED_SOURCE_DIR}/gen_SRCS.stamp2 DEPENDS H5make_libsettings WORKING_DIRECTORY ${HDF5_BINARY_DIR} ) @@ -1010,9 +1047,13 @@ set_source_files_properties (${HDF5_BINARY_DIR}/H5lib_settings.c PROPERTIES GENE if (BUILD_SHARED_LIBS) add_custom_command ( OUTPUT ${HDF5_BINARY_DIR}/shared/H5lib_settings.c + ${HDF5_BINARY_DIR}/shared/shared_gen_SRCS.stamp2 COMMAND ${CMAKE_COMMAND} ARGS -E copy_if_different "${HDF5_BINARY_DIR}/H5lib_settings.c" "${HDF5_BINARY_DIR}/shared/H5lib_settings.c" + COMMAND ${CMAKE_COMMAND} + ARGS -E touch ${HDF5_GENERATED_SOURCE_DIR}/shared/shared_gen_SRCS.stamp2 DEPENDS ${HDF5_BINARY_DIR}/H5lib_settings.c + WORKING_DIRECTORY ${HDF5_BINARY_DIR} ) set_source_files_properties (${HDF5_BINARY_DIR}/shared/H5lib_settings.c PROPERTIES GENERATED TRUE) endif () @@ -1025,8 +1066,8 @@ option (HDF5_ENABLE_DEBUG_APIS "Turn on extra debug output in all packages" OFF) # Add H5Tinit source to build - generated by H5detect/CMake at configure time #----------------------------------------------------------------------------- set (gen_SRCS ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c ${HDF5_BINARY_DIR}/H5lib_settings.c) +add_custom_target (gen_${HDF5_LIB_TARGET} ALL DEPENDS ${HDF5_GENERATED_SOURCE_DIR}/gen_SRCS.stamp1 ${HDF5_GENERATED_SOURCE_DIR}/gen_SRCS.stamp2) -add_custom_target (gen_${HDF5_LIB_TARGET} ALL DEPENDS ${gen_SRCS}) add_library (${HDF5_LIB_TARGET} STATIC ${common_SRCS} ${gen_SRCS} ${H5_PUBLIC_HEADERS} ${H5_PRIVATE_HEADERS} ${H5_GENERATED_HEADERS}) target_include_directories(${HDF5_LIB_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>" @@ -1055,8 +1096,8 @@ set (install_targets ${HDF5_LIB_TARGET}) if (BUILD_SHARED_LIBS) set (shared_gen_SRCS ${HDF5_GENERATED_SOURCE_DIR}/shared/H5Tinit.c ${HDF5_BINARY_DIR}/shared/H5lib_settings.c) + add_custom_target (gen_${HDF5_LIBSH_TARGET} ALL DEPENDS ${HDF5_GENERATED_SOURCE_DIR}/shared/shared_gen_SRCS.stamp1 ${HDF5_GENERATED_SOURCE_DIR}/shared/shared_gen_SRCS.stamp2) - add_custom_target (gen_${HDF5_LIBSH_TARGET} ALL DEPENDS ${shared_gen_SRCS}) add_library (${HDF5_LIBSH_TARGET} SHARED ${common_SRCS} ${shared_gen_SRCS} ${H5_PUBLIC_HEADERS} ${H5_PRIVATE_HEADERS} ${H5_GENERATED_HEADERS}) target_include_directories(${HDF5_LIBSH_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>" @@ -1046,6 +1046,8 @@ H5Aget_info(hid_t attr_id, H5A_info_t *ainfo) /* Check arguments */ if(NULL == (vol_obj = (H5VL_object_t *)H5I_object_verify(attr_id, H5I_ATTR))) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not an attribute") + if(!ainfo) + HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "attribute_info parameter cannot be NULL") loc_params.type = H5VL_OBJECT_BY_SELF; loc_params.obj_type = H5I_get_type(attr_id); diff --git a/src/H5Adeprec.c b/src/H5Adeprec.c index b43e41d..d4eac6a 100644 --- a/src/H5Adeprec.c +++ b/src/H5Adeprec.c @@ -343,7 +343,7 @@ H5Aget_num_attrs(hid_t loc_id) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, (-1), "invalid location identifier") /* Get the number of attributes for the object */ - if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_OBJECT_GET_INFO, &loc_params, &oinfo, H5O_INFO_ALL) < 0) + if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_OBJECT_GET_INFO, &loc_params, &oinfo, H5O_INFO_ALL) < 0) HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, (-1), "unable to get attribute count for object") H5_CHECKED_ASSIGN(ret_value, int, oinfo.num_attrs, hsize_t); @@ -408,7 +408,7 @@ H5Aiterate1(hid_t loc_id, unsigned *attr_num, H5A_operator1_t op, void *op_data) HGOTO_ERROR(H5E_VOL, H5E_BADTYPE, H5_ITER_ERROR, "invalid location identifier") /* Call attribute iteration routine */ - if((ret_value = H5VL_attr_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_ATTR_ITERATE_OLD, loc_id, attr_num, op, op_data)) < 0) + if((ret_value = H5VL_attr_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_ATTR_ITERATE_OLD, loc_id, attr_num, op, op_data)) < 0) HERROR(H5E_VOL, H5E_BADITER, "error iterating over attributes"); done: diff --git a/src/H5Apkg.h b/src/H5Apkg.h index cfe9dae..91061cd 100644 --- a/src/H5Apkg.h +++ b/src/H5Apkg.h @@ -155,21 +155,6 @@ typedef struct { H5A_t **attrs; /* Pointer to array of attribute pointers */ } H5A_attr_table_t; -/* Types for optional attribute VOL operations */ -typedef enum H5VL_attr_optional_t { - H5VL_ATTR_ITERATE_OLD /* H5Aiterate (deprecated routine) */ - /* (This enum value should have an - * "#ifndefH5_NO_DEPRECATED_SYMBOLS" - * around it, but the compiler - * complains about an empty enum - * when deprecated symbols are - * disabled currently. When - * another enum value is added, - * please put the #ifdef around - * this symbol. QAK - 2018/12/06 - */ -} H5VL_attr_optional_t; - /*****************************/ /* Package Private Variables */ diff --git a/src/H5Apublic.h b/src/H5Apublic.h index 586940b..726f51b 100644 --- a/src/H5Apublic.h +++ b/src/H5Apublic.h @@ -38,6 +38,22 @@ typedef struct { typedef herr_t (*H5A_operator2_t)(hid_t location_id/*in*/, const char *attr_name/*in*/, const H5A_info_t *ainfo/*in*/, void *op_data/*in,out*/); +/* Enumeration for native VOL connector attribute optional VOL operations */ +typedef enum H5VL_native_attr_optional_t { + H5VL_NATIVE_ATTR_ITERATE_OLD /* H5Aiterate (deprecated routine) */ + /* (This enum value should have an + * "#ifndefH5_NO_DEPRECATED_SYMBOLS" + * around it, but the compiler + * complains about an empty enum + * when deprecated symbols are + * disabled currently. When + * another enum value is added, + * please put the #ifdef around + * this symbol. QAK - 2018/12/06 + */ +} H5VL_native_attr_optional_t; + + /* Public function prototypes */ H5_DLL hid_t H5Acreate2(hid_t loc_id, const char *attr_name, hid_t type_id, hid_t space_id, hid_t acpl_id, hid_t aapl_id); @@ -1027,7 +1027,7 @@ H5Dformat_convert(hid_t dset_id) HGOTO_ERROR(H5E_DATASET, H5E_CANTSET, FAIL, "can't set collective metadata read info") /* Convert the dataset */ - if(H5VL_dataset_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_DATASET_FORMAT_CONVERT) < 0) + if(H5VL_dataset_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_DATASET_FORMAT_CONVERT) < 0) HGOTO_ERROR(H5E_DATASET, H5E_INTERNAL, FAIL, "can't convert dataset format") done: @@ -1063,7 +1063,7 @@ H5Dget_chunk_index_type(hid_t dset_id, H5D_chunk_index_t *idx_type) HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "idx_type parameter cannot be NULL") /* Get the chunk indexing type */ - if(H5VL_dataset_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_DATASET_GET_CHUNK_INDEX_TYPE, idx_type) < 0) + if(H5VL_dataset_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_DATASET_GET_CHUNK_INDEX_TYPE, idx_type) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get chunk index type") done: @@ -1104,7 +1104,7 @@ H5Dget_chunk_storage_size(hid_t dset_id, const hsize_t *offset, hsize_t *chunk_n HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "chunk_nbytes parameter cannot be NULL") /* Get the dataset creation property list */ - if(H5VL_dataset_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_DATASET_GET_CHUNK_STORAGE_SIZE, offset, chunk_nbytes) < 0) + if(H5VL_dataset_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_DATASET_GET_CHUNK_STORAGE_SIZE, offset, chunk_nbytes) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get storage size of chunk") done: diff --git a/src/H5Dio.c b/src/H5Dio.c index f977b0e..037d443 100644 --- a/src/H5Dio.c +++ b/src/H5Dio.c @@ -242,7 +242,7 @@ H5Dread_chunk(hid_t dset_id, hid_t dxpl_id, const hsize_t *offset, uint32_t *fil H5CX_set_dxpl(dxpl_id); /* Read the raw chunk */ - if(H5VL_dataset_optional(vol_obj, dxpl_id, H5_REQUEST_NULL, H5VL_DATASET_CHUNK_READ, offset, filters, buf) < 0) + if(H5VL_dataset_optional(vol_obj, dxpl_id, H5_REQUEST_NULL, H5VL_NATIVE_DATASET_CHUNK_READ, offset, filters, buf) < 0) HGOTO_ERROR(H5E_DATASET, H5E_READERROR, FAIL, "can't read unprocessed chunk data") done: @@ -370,7 +370,7 @@ H5Dwrite_chunk(hid_t dset_id, hid_t dxpl_id, uint32_t filters, const hsize_t *of H5CX_set_dxpl(dxpl_id); /* Write chunk */ - if(H5VL_dataset_optional(vol_obj, dxpl_id, H5_REQUEST_NULL, H5VL_DATASET_CHUNK_WRITE, filters, offset, data_size_32, buf) < 0) + if(H5VL_dataset_optional(vol_obj, dxpl_id, H5_REQUEST_NULL, H5VL_NATIVE_DATASET_CHUNK_WRITE, filters, offset, data_size_32, buf) < 0) HGOTO_ERROR(H5E_DATASET, H5E_WRITEERROR, FAIL, "can't write unprocessed chunk data") done: diff --git a/src/H5Dpkg.h b/src/H5Dpkg.h index 30652a5..2767aa1 100644 --- a/src/H5Dpkg.h +++ b/src/H5Dpkg.h @@ -110,15 +110,6 @@ typedef struct H5D_type_info_t { hbool_t bkg_buf_allocated; /* Whether the background buffer was allocated */ } H5D_type_info_t; -/* Types for dataset optional VOL operations */ -typedef enum H5VL_dataset_optional_t { - H5VL_DATASET_FORMAT_CONVERT, /* H5Dformat_convert (internal) */ - H5VL_DATASET_GET_CHUNK_INDEX_TYPE, /* H5Dget_chunk_index_type */ - H5VL_DATASET_GET_CHUNK_STORAGE_SIZE, /* H5Dget_chunk_storage_size */ - H5VL_DATASET_CHUNK_READ, /* H5Dchunk_read */ - H5VL_DATASET_CHUNK_WRITE, /* H5Dchunk_write */ -} H5VL_dataset_optional_t; - /* Forward declaration of structs used below */ struct H5D_io_info_t; struct H5D_chunk_map_t; diff --git a/src/H5Dpublic.h b/src/H5Dpublic.h index a1ccda0..921974d 100644 --- a/src/H5Dpublic.h +++ b/src/H5Dpublic.h @@ -104,6 +104,16 @@ typedef enum H5D_vds_view_t { /* Callback for H5Pset_append_flush() in a dataset access property list */ typedef herr_t (*H5D_append_cb_t)(hid_t dataset_id, hsize_t *cur_dims, void *op_data); +/* Enumeration for native VOL connector dataset optional VOL operations */ +typedef enum H5VL_native_dataset_optional_t { + H5VL_NATIVE_DATASET_FORMAT_CONVERT, /* H5Dformat_convert (internal) */ + H5VL_NATIVE_DATASET_GET_CHUNK_INDEX_TYPE, /* H5Dget_chunk_index_type */ + H5VL_NATIVE_DATASET_GET_CHUNK_STORAGE_SIZE, /* H5Dget_chunk_storage_size */ + H5VL_NATIVE_DATASET_CHUNK_READ, /* H5Dchunk_read */ + H5VL_NATIVE_DATASET_CHUNK_WRITE, /* H5Dchunk_write */ +} H5VL_native_dataset_optional_t; + + /********************/ /* Public Variables */ /********************/ @@ -545,7 +545,7 @@ H5Fget_vfd_handle(hid_t file_id, hid_t fapl_id, void **file_handle) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid file identifier") /* Retrieve the VFD handle for the file */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_GET_VFD_HANDLE, file_handle, fapl_id) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_GET_VFD_HANDLE, file_handle, fapl_id) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "unable to get VFD handle") done: @@ -931,7 +931,7 @@ H5Fget_freespace(hid_t file_id) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, (-1), "invalid file identifier") /* Get the amount of free space in the file */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_GET_FREE_SPACE, &ret_value) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_GET_FREE_SPACE, &ret_value) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTGET, (-1), "unable to get file free space") done: @@ -966,7 +966,7 @@ H5Fget_filesize(hid_t file_id, hsize_t *size) HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID") /* Get the file size */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_GET_SIZE, size) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_GET_SIZE, size) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "unable to get file size") done: @@ -1027,7 +1027,7 @@ H5Fget_file_image(hid_t file_id, void *buf_ptr, size_t buf_len) HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, (-1), "not a file ID") /* Get the file image */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_GET_FILE_IMAGE, buf_ptr, &ret_value, buf_len) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_GET_FILE_IMAGE, buf_ptr, &ret_value, buf_len) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTGET, (-1), "unable to get file image") done: @@ -1067,7 +1067,7 @@ H5Fget_mdc_config(hid_t file_id, H5AC_cache_config_t *config_ptr) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid file identifier") /* Get the metadata cache configuration */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_GET_MDC_CONF, config_ptr) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_GET_MDC_CONF, config_ptr) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "unable to get metadata cache configuration") done: @@ -1100,7 +1100,7 @@ H5Fset_mdc_config(hid_t file_id, H5AC_cache_config_t *config_ptr) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid file identifier") /* Set the metadata cache configuration */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_SET_MDC_CONFIG, config_ptr) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_SET_MDC_CONFIG, config_ptr) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "unable to set metadata cache configuration") done: @@ -1136,7 +1136,7 @@ H5Fget_mdc_hit_rate(hid_t file_id, double *hit_rate_ptr) HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID") /* Get the current hit rate */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_GET_MDC_HR, hit_rate_ptr) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_GET_MDC_HR, hit_rate_ptr) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "unable to get MDC hit rate") done: @@ -1173,7 +1173,7 @@ H5Fget_mdc_size(hid_t file_id, size_t *max_size_ptr, size_t *min_clean_size_ptr, HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID") /* Get the size data */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_GET_MDC_SIZE, max_size_ptr, min_clean_size_ptr, cur_size_ptr, cur_num_entries_ptr) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_GET_MDC_SIZE, max_size_ptr, min_clean_size_ptr, cur_size_ptr, cur_num_entries_ptr) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "unable to get MDC size") done: @@ -1211,7 +1211,7 @@ H5Freset_mdc_hit_rate_stats(hid_t file_id) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid file identifier") /* Reset the hit rate statistic */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_RESET_MDC_HIT_RATE) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_RESET_MDC_HIT_RATE) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't reset cache hit rate") done: @@ -1305,7 +1305,7 @@ H5Fget_info2(hid_t obj_id, H5F_info2_t *finfo) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid object identifier") /* Get the file information */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_GET_INFO, type, finfo) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_GET_INFO, type, finfo) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "unable to retrieve file info") done: @@ -1341,7 +1341,7 @@ H5Fget_metadata_read_retry_info(hid_t file_id, H5F_retry_info_t *info) HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID") /* Get the retry info */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_GET_METADATA_READ_RETRY_INFO, info) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_GET_METADATA_READ_RETRY_INFO, info) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTRELEASE, FAIL, "can't get metadata read retry info") done: @@ -1380,7 +1380,7 @@ H5Fget_free_sections(hid_t file_id, H5F_mem_t type, size_t nsects, HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, (-1), "nsects must be > 0") /* Get the free-space section information in the file */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_GET_FREE_SECTIONS, sect_info, &ret_value, type, nsects) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_GET_FREE_SECTIONS, sect_info, &ret_value, type, nsects) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTGET, (-1), "unable to get file free sections") done: @@ -1413,7 +1413,7 @@ H5Fclear_elink_file_cache(hid_t file_id) HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID") /* Release the EFC */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_CLEAR_ELINK_CACHE) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_CLEAR_ELINK_CACHE) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTRELEASE, FAIL, "can't release external file cache") done: @@ -1473,7 +1473,7 @@ H5Fstart_swmr_write(hid_t file_id) HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set collective metadata read info") /* Start SWMR writing */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_START_SWMR_WRITE) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_START_SWMR_WRITE) < 0) HGOTO_ERROR(H5E_FILE, H5E_SYSTEM, FAIL, "unable to start SWMR writing") done: @@ -1505,7 +1505,7 @@ H5Fstart_mdc_logging(hid_t file_id) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "hid_t identifier is not a file ID") /* Call mdc logging function */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_START_MDC_LOGGING) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_START_MDC_LOGGING) < 0) HGOTO_ERROR(H5E_FILE, H5E_LOGFAIL, FAIL, "unable to start mdc logging") done: @@ -1538,7 +1538,7 @@ H5Fstop_mdc_logging(hid_t file_id) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "hid_t identifier is not a file ID") /* Call mdc logging function */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_STOP_MDC_LOGGING) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_STOP_MDC_LOGGING) < 0) HGOTO_ERROR(H5E_FILE, H5E_LOGFAIL, FAIL, "unable to stop mdc logging") done: @@ -1572,7 +1572,7 @@ H5Fget_mdc_logging_status(hid_t file_id, hbool_t *is_enabled, HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "hid_t identifier is not a file ID") /* Call mdc logging function */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_GET_MDC_LOGGING_STATUS, is_enabled, is_currently_logging) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_GET_MDC_LOGGING_STATUS, is_enabled, is_currently_logging) < 0) HGOTO_ERROR(H5E_FILE, H5E_LOGFAIL, FAIL, "unable to get logging status") done: @@ -1610,7 +1610,7 @@ H5Fset_libver_bounds(hid_t file_id, H5F_libver_t low, H5F_libver_t high) HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set collective metadata read info") /* Set the library's version bounds */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_SET_LIBVER_BOUNDS, low, high) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_SET_LIBVER_BOUNDS, low, high) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set library version bounds") done: @@ -1647,7 +1647,7 @@ H5Fformat_convert(hid_t file_id) HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set collective metadata read info") /* Convert the format */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_FORMAT_CONVERT) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_FORMAT_CONVERT) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTCONVERT, FAIL, "can't convert file format") done: @@ -1678,7 +1678,7 @@ H5Freset_page_buffering_stats(hid_t file_id) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid file identifier") /* Reset the statistics */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_RESET_PAGE_BUFFERING_STATS) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_RESET_PAGE_BUFFERING_STATS) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't reset stats for page buffering") done: @@ -1713,7 +1713,7 @@ H5Fget_page_buffering_stats(hid_t file_id, unsigned accesses[2], unsigned hits[2 HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "NULL input parameters for stats") /* Get the statistics */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_GET_PAGE_BUFFERING_STATS, accesses, hits, misses, evictions, bypasses) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_GET_PAGE_BUFFERING_STATS, accesses, hits, misses, evictions, bypasses) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "can't retrieve stats for page buffering") done: @@ -1748,7 +1748,7 @@ H5Fget_mdc_image_info(hid_t file_id, haddr_t *image_addr, hsize_t *image_len) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "hid_t identifier is not a file ID") /* Go get the address and size of the cache image */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_GET_MDC_IMAGE_INFO, image_addr, image_len) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_GET_MDC_IMAGE_INFO, image_addr, image_len) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "can't retrieve cache image info") done: @@ -1782,7 +1782,7 @@ H5Fget_eoa(hid_t file_id, haddr_t *eoa) /* Only do work if valid pointer to fill in */ if(eoa) { /* Retrieve the EOA for the file */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_GET_EOA, eoa) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_GET_EOA, eoa) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "unable to get EOA") } /* end if */ @@ -1813,7 +1813,7 @@ H5Fincrement_filesize(hid_t file_id, hsize_t increment) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "hid_t identifier is not a file ID") /* Increment the file size */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_INCR_FILESIZE, increment) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_INCR_FILESIZE, increment) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "unable to increment file size") done: diff --git a/src/H5Fdeprec.c b/src/H5Fdeprec.c index dfc1441..1a2418d 100644 --- a/src/H5Fdeprec.c +++ b/src/H5Fdeprec.c @@ -118,7 +118,7 @@ H5Fget_info1(hid_t obj_id, H5F_info1_t *finfo) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid object identifier") /* Get the file information */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_GET_INFO, type, &finfo2) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_GET_INFO, type, &finfo2) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "unable to retrieve file info") /* Copy the compatible fields into the older struct */ @@ -225,7 +225,7 @@ H5Fset_latest_format(hid_t file_id, hbool_t latest_format) low = H5F_LIBVER_EARLIEST; /* Set the library's version bounds */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_SET_LIBVER_BOUNDS, low, high) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_SET_LIBVER_BOUNDS, low, high) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set library version bounds") done: diff --git a/src/H5Fint.c b/src/H5Fint.c index 4ac74ad..993db06 100644 --- a/src/H5Fint.c +++ b/src/H5Fint.c @@ -3693,7 +3693,7 @@ H5F_get_file_id(hid_t obj_id, H5I_type_t type) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, H5I_INVALID_HID, "invalid identifier") /* Get the file through the VOL */ - if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_FILE_GET_FILE_ID, type, &file_id) < 0) + if(H5VL_file_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_FILE_GET_FILE_ID, type, &file_id) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTINIT, H5I_INVALID_HID, "unable to get file ID") if(H5I_INVALID_HID == file_id) HGOTO_ERROR(H5E_FILE, H5E_CANTINIT, H5I_INVALID_HID, "unable to get the file ID through the VOL") diff --git a/src/H5Fpkg.h b/src/H5Fpkg.h index fc902b0..e5bb28f 100644 --- a/src/H5Fpkg.h +++ b/src/H5Fpkg.h @@ -382,35 +382,6 @@ struct H5F_t { #endif /* H5_HAVE_PARALLEL */ }; -/* types for file optional VOL operations */ -typedef enum H5VL_file_optional_t { - H5VL_FILE_CLEAR_ELINK_CACHE, /* Clear external link cache */ - H5VL_FILE_GET_FILE_IMAGE, /* file image */ - H5VL_FILE_GET_FREE_SECTIONS, /* file free selections */ - H5VL_FILE_GET_FREE_SPACE, /* file freespace */ - H5VL_FILE_GET_INFO, /* file info */ - H5VL_FILE_GET_MDC_CONF, /* file metadata cache configuration */ - H5VL_FILE_GET_MDC_HR, /* file metadata cache hit rate */ - H5VL_FILE_GET_MDC_SIZE, /* file metadata cache size */ - H5VL_FILE_GET_SIZE, /* file size */ - H5VL_FILE_GET_VFD_HANDLE, /* file VFD handle */ - H5VL_FILE_GET_FILE_ID, /* retrieve or resurrect file ID of object */ - H5VL_FILE_RESET_MDC_HIT_RATE, /* get metadata cache hit rate */ - H5VL_FILE_SET_MDC_CONFIG, /* set metadata cache configuration */ - H5VL_FILE_GET_METADATA_READ_RETRY_INFO, - H5VL_FILE_START_SWMR_WRITE, - H5VL_FILE_START_MDC_LOGGING, - H5VL_FILE_STOP_MDC_LOGGING, - H5VL_FILE_GET_MDC_LOGGING_STATUS, - H5VL_FILE_FORMAT_CONVERT, - H5VL_FILE_RESET_PAGE_BUFFERING_STATS, - H5VL_FILE_GET_PAGE_BUFFERING_STATS, - H5VL_FILE_GET_MDC_IMAGE_INFO, - H5VL_FILE_GET_EOA, - H5VL_FILE_INCR_FILESIZE, - H5VL_FILE_SET_LIBVER_BOUNDS -} H5VL_file_optional_t; - /*****************************/ /* Package Private Variables */ diff --git a/src/H5Fpublic.h b/src/H5Fpublic.h index 8e54e7f..ec543b6 100644 --- a/src/H5Fpublic.h +++ b/src/H5Fpublic.h @@ -217,6 +217,35 @@ typedef struct H5F_retry_info_t { /* Callback for H5Pset_object_flush_cb() in a file access property list */ typedef herr_t (*H5F_flush_cb_t)(hid_t object_id, void *udata); +/* Enumeration for native VOL connector file optional VOL operations */ +typedef enum H5VL_native_file_optional_t { + H5VL_NATIVE_FILE_CLEAR_ELINK_CACHE, /* H5Fclear_elink_file_cache */ + H5VL_NATIVE_FILE_GET_FILE_IMAGE, /* H5Fget_file_image */ + H5VL_NATIVE_FILE_GET_FREE_SECTIONS, /* H5Fget_free_sections */ + H5VL_NATIVE_FILE_GET_FREE_SPACE, /* H5Fget_freespace */ + H5VL_NATIVE_FILE_GET_INFO, /* H5Fget_info1/2 */ + H5VL_NATIVE_FILE_GET_MDC_CONF, /* H5Fget_mdc_config */ + H5VL_NATIVE_FILE_GET_MDC_HR, /* H5Fget_mdc_hit_rate */ + H5VL_NATIVE_FILE_GET_MDC_SIZE, /* H5Fget_mdc_size */ + H5VL_NATIVE_FILE_GET_SIZE, /* H5Fget_filesize */ + H5VL_NATIVE_FILE_GET_VFD_HANDLE, /* H5Fget_vfd_handle */ + H5VL_NATIVE_FILE_GET_FILE_ID, /* H5Fget_file_id */ + H5VL_NATIVE_FILE_RESET_MDC_HIT_RATE, /* H5Freset_mdc_hit_rate_stats */ + H5VL_NATIVE_FILE_SET_MDC_CONFIG, /* H5Fset_mdc_config */ + H5VL_NATIVE_FILE_GET_METADATA_READ_RETRY_INFO, /* H5Fget_metadata_read_retry_info */ + H5VL_NATIVE_FILE_START_SWMR_WRITE, /* H5Fstart_swmr_write */ + H5VL_NATIVE_FILE_START_MDC_LOGGING, /* H5Fstart_mdc_logging */ + H5VL_NATIVE_FILE_STOP_MDC_LOGGING, /* H5Fstop_mdc_logging */ + H5VL_NATIVE_FILE_GET_MDC_LOGGING_STATUS, /* H5Fget_mdc_logging_status */ + H5VL_NATIVE_FILE_FORMAT_CONVERT, /* H5Fformat_convert */ + H5VL_NATIVE_FILE_RESET_PAGE_BUFFERING_STATS, /* H5Freset_page_buffering_stats */ + H5VL_NATIVE_FILE_GET_PAGE_BUFFERING_STATS, /* H5Fget_page_buffering_stats */ + H5VL_NATIVE_FILE_GET_MDC_IMAGE_INFO, /* H5Fget_mdc_image_info */ + H5VL_NATIVE_FILE_GET_EOA, /* H5Fget_eoa */ + H5VL_NATIVE_FILE_INCR_FILESIZE, /* H5Fincrement_filesize */ + H5VL_NATIVE_FILE_SET_LIBVER_BOUNDS /* H5Fset_latest_format/libver_bounds */ +} H5VL_native_file_optional_t; + #ifdef __cplusplus extern "C" { diff --git a/src/H5Gdeprec.c b/src/H5Gdeprec.c index a15703e..07cad55 100644 --- a/src/H5Gdeprec.c +++ b/src/H5Gdeprec.c @@ -734,7 +734,7 @@ H5Gset_comment(hid_t loc_id, const char *name, const char *comment) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid location identifier") /* Set the comment */ - if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_OBJECT_SET_COMMENT, &loc_params, comment) < 0) + if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_OBJECT_SET_COMMENT, &loc_params, comment) < 0) HGOTO_ERROR(H5E_SYM, H5E_CANTSET, FAIL, "unable to set comment value") done: @@ -795,7 +795,7 @@ H5Gget_comment(hid_t loc_id, const char *name, size_t bufsize, char *buf) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid location identifier") /* Get the comment */ - if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_OBJECT_GET_COMMENT, &loc_params, buf, bufsize, &ret_value) < 0) + if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_OBJECT_GET_COMMENT, &loc_params, buf, bufsize, &ret_value) < 0) HGOTO_ERROR(H5E_SYM, H5E_CANTGET, FAIL, "unable to get comment value") done: @@ -868,7 +868,7 @@ H5Giterate(hid_t loc_id, const char *name, int *idx_p, H5G_iterate_t op, HGOTO_ERROR(H5E_ATOM, H5E_BADTYPE, (-1), "invalid identifier") /* Call private iteration function, through VOL callback */ - if((ret_value = H5VL_group_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_GROUP_ITERATE_OLD, &loc_params, idx, &last_obj, &lnk_op, op_data)) < 0) + if((ret_value = H5VL_group_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_GROUP_ITERATE_OLD, &loc_params, idx, &last_obj, &lnk_op, op_data)) < 0) HERROR(H5E_SYM, H5E_BADITER, "error iterating over group's links"); /* Set the index we stopped at */ @@ -985,7 +985,7 @@ H5Gget_objinfo(hid_t loc_id, const char *name, hbool_t follow_link, HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid location identifier") /* Retrieve the object's information */ - if(H5VL_group_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_GROUP_GET_OBJINFO, &loc_params, (unsigned)follow_link, statbuf) < 0) + if(H5VL_group_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_GROUP_GET_OBJINFO, &loc_params, (unsigned)follow_link, statbuf) < 0) HGOTO_ERROR(H5E_SYM, H5E_CANTGET, FAIL, "can't get info for object: '%s'", name) } /* end if */ @@ -1239,7 +1239,7 @@ H5Gget_objtype_by_idx(hid_t loc_id, hsize_t idx) /* Retrieve the object's basic information (which includes its type) */ fields = H5O_INFO_BASIC; - if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_OBJECT_GET_INFO, &loc_params, &oinfo, fields) < 0) + if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_OBJECT_GET_INFO, &loc_params, &oinfo, fields) < 0) HGOTO_ERROR(H5E_SYM, H5E_BADTYPE, H5G_UNKNOWN, "can't get object info") /* Map to group object type */ diff --git a/src/H5Gpkg.h b/src/H5Gpkg.h index 159b6f5..f475bde 100644 --- a/src/H5Gpkg.h +++ b/src/H5Gpkg.h @@ -299,22 +299,6 @@ typedef struct H5G_copy_file_ud_t { H5G_cache_t cache; /* Cached data for symbol table entry */ } H5G_copy_file_ud_t; -/* Types for optional group VOL operations */ -typedef enum H5VL_group_optional_t { - H5VL_GROUP_ITERATE_OLD, /* HG5Giterate (deprecated routine) */ - H5VL_GROUP_GET_OBJINFO /* HG5Gget_objinfo (deprecated routine) */ - /* (These two enum values should have an - * "#ifndefH5_NO_DEPRECATED_SYMBOLS" - * around them, but the compiler - * complains about an empty enum - * when deprecated symbols are - * disabled currently. When - * another enum value is added, - * please put the #ifdef around - * these symbols. QAK - 2018/12/06 - */ -} H5VL_group_optional_t; - /*****************************/ /* Package Private Variables */ diff --git a/src/H5Gpublic.h b/src/H5Gpublic.h index ab6f200..58961ba 100644 --- a/src/H5Gpublic.h +++ b/src/H5Gpublic.h @@ -62,6 +62,22 @@ typedef struct H5G_info_t { hbool_t mounted; /* Whether group has a file mounted on it */ } H5G_info_t; +/* Enumeration for native VOL connector group optional VOL operations */ +typedef enum H5VL_native_group_optional_t { + H5VL_NATIVE_GROUP_ITERATE_OLD, /* HG5Giterate (deprecated routine) */ + H5VL_NATIVE_GROUP_GET_OBJINFO /* HG5Gget_objinfo (deprecated routine) */ + /* (These two enum values should have an + * "#ifndefH5_NO_DEPRECATED_SYMBOLS" + * around them, but the compiler + * complains about an empty enum + * when deprecated symbols are + * disabled currently. When + * another enum value is added, + * please put the #ifdef around + * these symbols. QAK - 2018/12/06 + */ +} H5VL_native_group_optional_t; + /********************/ /* Public Variables */ /********************/ @@ -575,7 +575,7 @@ H5Oget_info2(hid_t loc_id, H5O_info_t *oinfo, unsigned fields) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid location identifier") /* Retrieve the object's information */ - if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_OBJECT_GET_INFO, &loc_params, oinfo, fields) < 0) + if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_OBJECT_GET_INFO, &loc_params, oinfo, fields) < 0) HGOTO_ERROR(H5E_OHDR, H5E_CANTGET, FAIL, "can't get info for object") done: @@ -633,7 +633,7 @@ H5Oget_info_by_name2(hid_t loc_id, const char *name, H5O_info_t *oinfo, HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid location identifier") /* Retrieve the object's information */ - if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_OBJECT_GET_INFO, &loc_params, oinfo, fields) < 0) + if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_OBJECT_GET_INFO, &loc_params, oinfo, fields) < 0) HGOTO_ERROR(H5E_OHDR, H5E_CANTGET, FAIL, "can't get info for object: '%s'", name) done: @@ -698,7 +698,7 @@ H5Oget_info_by_idx2(hid_t loc_id, const char *group_name, H5_index_t idx_type, HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid location identifier") /* Retrieve the object's information */ - if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_OBJECT_GET_INFO, &loc_params, oinfo, fields) < 0) + if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_OBJECT_GET_INFO, &loc_params, oinfo, fields) < 0) HGOTO_ERROR(H5E_OHDR, H5E_CANTGET, FAIL, "can't get info for object") done: @@ -746,7 +746,7 @@ H5Oset_comment(hid_t obj_id, const char *comment) loc_params.obj_type = H5I_get_type(obj_id); /* (Re)set the object's comment */ - if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_OBJECT_SET_COMMENT, &loc_params, comment) < 0) + if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_OBJECT_SET_COMMENT, &loc_params, comment) < 0) HGOTO_ERROR(H5E_OHDR, H5E_CANTSET, FAIL, "can't set comment for object") done: @@ -801,7 +801,7 @@ H5Oset_comment_by_name(hid_t loc_id, const char *name, const char *comment, HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid location identifier") /* (Re)set the object's comment */ - if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_OBJECT_SET_COMMENT, &loc_params, comment) < 0) + if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_OBJECT_SET_COMMENT, &loc_params, comment) < 0) HGOTO_ERROR(H5E_OHDR, H5E_CANTSET, FAIL, "can't set comment for object: '%s'", name) done: @@ -844,7 +844,7 @@ H5Oget_comment(hid_t obj_id, char *comment, size_t bufsize) loc_params.obj_type = H5I_get_type(obj_id); /* Retrieve the object's comment */ - if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_OBJECT_GET_COMMENT, &loc_params, comment, bufsize, &ret_value) < 0) + if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_OBJECT_GET_COMMENT, &loc_params, comment, bufsize, &ret_value) < 0) HGOTO_ERROR(H5E_OHDR, H5E_CANTGET, (-1), "can't get comment for object") done: @@ -898,7 +898,7 @@ H5Oget_comment_by_name(hid_t loc_id, const char *name, char *comment, size_t buf HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, (-1), "invalid location identifier") /* Retrieve the object's comment */ - if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_OBJECT_GET_COMMENT, &loc_params, comment, bufsize, &ret_value) < 0) + if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_OBJECT_GET_COMMENT, &loc_params, comment, bufsize, &ret_value) < 0) HGOTO_ERROR(H5E_OHDR, H5E_CANTGET, (-1), "can't get comment for object: '%s'", name) done: diff --git a/src/H5Odeprec.c b/src/H5Odeprec.c index 93fc18a..56b0c05 100644 --- a/src/H5Odeprec.c +++ b/src/H5Odeprec.c @@ -109,7 +109,7 @@ H5Oget_info1(hid_t loc_id, H5O_info_t *oinfo) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid location identifier") /* Retrieve the object's information */ - if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_OBJECT_GET_INFO, &loc_params, oinfo, H5O_INFO_ALL) < 0) + if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_OBJECT_GET_INFO, &loc_params, oinfo, H5O_INFO_ALL) < 0) HGOTO_ERROR(H5E_OHDR, H5E_CANTGET, FAIL, "can't get info for object") done: @@ -160,7 +160,7 @@ H5Oget_info_by_name1(hid_t loc_id, const char *name, H5O_info_t *oinfo, hid_t la HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid location identifier") /* Retrieve the object's information */ - if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_OBJECT_GET_INFO, &loc_params, oinfo, H5O_INFO_ALL) < 0) + if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_OBJECT_GET_INFO, &loc_params, oinfo, H5O_INFO_ALL) < 0) HGOTO_ERROR(H5E_OHDR, H5E_CANTGET, FAIL, "can't get info for object: '%s'", name) done: @@ -221,7 +221,7 @@ H5Oget_info_by_idx1(hid_t loc_id, const char *group_name, H5_index_t idx_type, HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid location identifier") /* Retrieve the object's information */ - if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_OBJECT_GET_INFO, &loc_params, oinfo, H5O_INFO_ALL) < 0) + if(H5VL_object_optional(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, H5VL_NATIVE_OBJECT_GET_INFO, &loc_params, oinfo, H5O_INFO_ALL) < 0) HGOTO_ERROR(H5E_OHDR, H5E_CANTGET, FAIL, "can't get info for object") done: diff --git a/src/H5Oprivate.h b/src/H5Oprivate.h index e8565b9..7ed9e26 100644 --- a/src/H5Oprivate.h +++ b/src/H5Oprivate.h @@ -851,13 +851,6 @@ typedef struct { } u; } H5O_mesg_operator_t; -/* Types for object optional VOL operations */ -typedef enum H5VL_object_optional_t { - H5VL_OBJECT_GET_COMMENT, /* get object comment */ - H5VL_OBJECT_GET_INFO, /* get object info */ - H5VL_OBJECT_SET_COMMENT /* set object comment */ -} H5VL_object_optional_t; - /* Typedef for abstract object creation */ typedef struct { H5O_type_t obj_type; /* Type of object to create */ diff --git a/src/H5Opublic.h b/src/H5Opublic.h index da2910d..fe0c72d 100644 --- a/src/H5Opublic.h +++ b/src/H5Opublic.h @@ -150,6 +150,13 @@ typedef enum H5O_mcdt_search_ret_t { /* Callback to invoke when completing the search for a matching committed datatype from the committed dtype list */ typedef H5O_mcdt_search_ret_t (*H5O_mcdt_search_cb_t)(void *op_data); +/* Enumeration for native VOL connector object optional VOL operations */ +typedef enum H5VL_native_object_optional_t { + H5VL_NATIVE_OBJECT_GET_COMMENT, /* H5G|H5Oget_comment, H5Oget_comment_by_name */ + H5VL_NATIVE_OBJECT_GET_INFO, /* H5Oget_info(_by_idx, _by_name)(2?) */ + H5VL_NATIVE_OBJECT_SET_COMMENT /* H5G|H5Oset_comment, H5Oset_comment_by_name */ +} H5VL_native_object_optional_t; + /********************/ /* Public Variables */ /********************/ diff --git a/src/H5PLint.c b/src/H5PLint.c index bbe71fe..ded315a 100644 --- a/src/H5PLint.c +++ b/src/H5PLint.c @@ -262,7 +262,7 @@ H5PL_load(H5PL_type_t type, const H5PL_key_t *key) /* Set up the search parameters */ search_params.type = type; - search_params.key.id = key->id; + search_params.key = key; /* Search in the table of already loaded plugin libraries */ if(H5PL__find_plugin_in_cache(&search_params, &found, &plugin_info) < 0) diff --git a/src/H5PLpath.c b/src/H5PLpath.c index d53007b..04248b5 100644 --- a/src/H5PLpath.c +++ b/src/H5PLpath.c @@ -242,6 +242,7 @@ H5PL__create_path_table(void) * environment variable or the default. */ char *next_path = NULL; /* A path tokenized from the paths string */ + char *lasts = NULL; /* Context pointer for strtok_r() call */ herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_PACKAGE @@ -265,8 +266,7 @@ H5PL__create_path_table(void) HGOTO_ERROR(H5E_PLUGIN, H5E_CANTALLOC, FAIL, "can't allocate memory for path copy") /* Separate the paths and store them */ - /* XXX: strtok() is not thread-safe */ - next_path = HDstrtok(paths, H5PL_PATH_SEPARATOR); + next_path = HDstrtok_r(paths, H5PL_PATH_SEPARATOR, &lasts); while (next_path) { /* Insert the path into the table */ @@ -274,7 +274,7 @@ H5PL__create_path_table(void) HGOTO_ERROR(H5E_PLUGIN, H5E_CANTALLOC, FAIL, "can't insert path: %s", next_path) /* Get the next path from the environment string */ - next_path = HDstrtok(NULL, H5PL_PATH_SEPARATOR); + next_path = HDstrtok_r(NULL, H5PL_PATH_SEPARATOR, &lasts); } /* end while */ done: @@ -689,7 +689,7 @@ H5PL__find_plugin_in_path(const H5PL_search_params_t *search_params, hbool_t *fo continue; /* attempt to open the dynamic library as a filter library */ - if (H5PL__open(path, search_params->type, &(search_params->key), found, plugin_info) < 0) + if (H5PL__open(path, search_params->type, search_params->key, found, plugin_info) < 0) HGOTO_ERROR(H5E_PLUGIN, H5E_CANTGET, FAIL, "search in directory failed") if (*found) HGOTO_DONE(SUCCEED) @@ -755,7 +755,7 @@ H5PL__find_plugin_in_path(const H5PL_search_params_t *search_params, hbool_t *fo continue; /* attempt to open the dynamic library as a filter library */ - if (H5PL__open(path, search_params->type, &(search_params->key), found, plugin_info) < 0) + if (H5PL__open(path, search_params->type, search_params->key, found, plugin_info) < 0) HGOTO_ERROR(H5E_PLUGIN, H5E_CANTGET, FAIL, "search in directory failed") if (*found) HGOTO_DONE(SUCCEED) diff --git a/src/H5PLpkg.h b/src/H5PLpkg.h index d60da82..c3ad8f5 100644 --- a/src/H5PLpkg.h +++ b/src/H5PLpkg.h @@ -116,7 +116,7 @@ /* Data used to search for plugins */ typedef struct H5PL_search_params_t { H5PL_type_t type; - H5PL_key_t key; + const H5PL_key_t *key; } H5PL_search_params_t; diff --git a/src/H5PLplugin_cache.c b/src/H5PLplugin_cache.c index 7fe676d..cd0b4d6 100644 --- a/src/H5PLplugin_cache.c +++ b/src/H5PLplugin_cache.c @@ -276,7 +276,7 @@ H5PL__find_plugin_in_cache(const H5PL_search_params_t *search_params, hbool_t *f for (u = 0; u < H5PL_num_plugins_g; u++) { /* If the plugin type (filter, etc.) and ID match, query the plugin for its info */ - if ((search_params->type == (H5PL_cache_g[u]).type) && (search_params->key.id == (H5PL_cache_g[u]).key.id)) { + if ((search_params->type == (H5PL_cache_g[u]).type) && (search_params->key->id == (H5PL_cache_g[u]).key.id)) { H5PL_get_plugin_info_t get_plugin_info_function; const H5Z_class2_t *filter_info; diff --git a/src/H5Tcommit.c b/src/H5Tcommit.c index 610c628..712b264 100644 --- a/src/H5Tcommit.c +++ b/src/H5Tcommit.c @@ -155,7 +155,7 @@ H5Tcommit2(hid_t loc_id, const char *name, hid_t type_id, hid_t lcpl_id, /* Set up VOL object */ if(NULL == (new_obj = H5FL_CALLOC(H5VL_object_t))) - HGOTO_ERROR(H5E_VOL, H5E_NOSPACE, FAIL, "can't allocate top object structure") + HGOTO_ERROR(H5E_DATATYPE, H5E_CANTALLOC, FAIL, "can't allocate top object structure") new_obj->connector = vol_obj->connector; new_obj->connector->nrefs ++; new_obj->data = data; @@ -308,7 +308,7 @@ H5Tcommit_anon(hid_t loc_id, hid_t type_id, hid_t tcpl_id, hid_t tapl_id) /* Setup VOL object */ if(NULL == (new_obj = H5FL_CALLOC(H5VL_object_t))) - HGOTO_ERROR(H5E_VOL, H5E_NOSPACE, FAIL, "can't allocate top object structure") + HGOTO_ERROR(H5E_DATATYPE, H5E_CANTALLOC, FAIL, "can't allocate top object structure") new_obj->connector = vol_obj->connector; new_obj->connector->nrefs ++; new_obj->data = dt; diff --git a/src/H5VLcallback.c b/src/H5VLcallback.c index 2828262..6e19e07 100644 --- a/src/H5VLcallback.c +++ b/src/H5VLcallback.c @@ -1360,7 +1360,7 @@ H5VL_attr_get(const H5VL_object_t *vol_obj, H5VL_attr_get_t get_type, vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; if(H5VL__attr_get(vol_obj->data, vol_obj->connector->cls, get_type, dxpl_id, req, arguments) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTGET, FAIL, "attribute get failed") @@ -1368,7 +1368,7 @@ H5VL_attr_get(const H5VL_object_t *vol_obj, H5VL_attr_get_t get_type, done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -1473,7 +1473,7 @@ H5VL_attr_specific(const H5VL_object_t *vol_obj, const H5VL_loc_params_t *loc_pa vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; if((ret_value = H5VL__attr_specific(vol_obj->data, loc_params, vol_obj->connector->cls, specific_type, dxpl_id, req, arguments)) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTOPERATE, FAIL, "unable to execute attribute specific callback") @@ -1481,7 +1481,7 @@ H5VL_attr_specific(const H5VL_object_t *vol_obj, const H5VL_loc_params_t *loc_pa done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -1584,7 +1584,7 @@ H5VL_attr_optional(const H5VL_object_t *vol_obj, hid_t dxpl_id, void **req, ...) vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; if((ret_value = H5VL__attr_optional(vol_obj->data, vol_obj->connector->cls, dxpl_id, req, arguments)) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTOPERATE, FAIL, "unable to execute attribute optional callback") @@ -1592,7 +1592,7 @@ H5VL_attr_optional(const H5VL_object_t *vol_obj, hid_t dxpl_id, void **req, ...) done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -2207,7 +2207,7 @@ H5VL_dataset_get(const H5VL_object_t *vol_obj, H5VL_dataset_get_t get_type, vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; if(H5VL__dataset_get(vol_obj->data, vol_obj->connector->cls, get_type, dxpl_id, req, arguments) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTGET, FAIL, "dataset get failed") @@ -2215,7 +2215,7 @@ H5VL_dataset_get(const H5VL_object_t *vol_obj, H5VL_dataset_get_t get_type, done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -2319,7 +2319,7 @@ H5VL_dataset_specific(const H5VL_object_t *vol_obj, H5VL_dataset_specific_t spec vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; if(H5VL__dataset_specific(vol_obj->data, vol_obj->connector->cls, specific_type, dxpl_id, req, arguments) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTOPERATE, FAIL, "unable to execute dataset specific callback") @@ -2327,7 +2327,7 @@ H5VL_dataset_specific(const H5VL_object_t *vol_obj, H5VL_dataset_specific_t spec done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -2432,7 +2432,7 @@ H5VL_dataset_optional(const H5VL_object_t *vol_obj, hid_t dxpl_id, vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; if(H5VL__dataset_optional(vol_obj->data, vol_obj->connector->cls, dxpl_id, req, arguments) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTOPERATE, FAIL, "unable to execute dataset optional callback") @@ -2440,7 +2440,7 @@ H5VL_dataset_optional(const H5VL_object_t *vol_obj, hid_t dxpl_id, done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -2617,7 +2617,7 @@ H5VL__file_cache_connector(void *obj, const H5VL_class_t *cls, hid_t dxpl_id, FUNC_ENTER_STATIC /* Re-issue call to internal file specific callback routine */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; if(H5VL__file_specific(obj, cls, H5VL_FILE_CACHE_VOL_CONN, dxpl_id, req, arguments) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTOPERATE, FAIL, "file specific failed") @@ -2625,7 +2625,7 @@ H5VL__file_cache_connector(void *obj, const H5VL_class_t *cls, hid_t dxpl_id, done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); FUNC_LEAVE_NOAPI(ret_value) } /* end H5VL__file_cache_connector() */ @@ -2914,7 +2914,7 @@ H5VL_file_get(const H5VL_object_t *vol_obj, H5VL_file_get_t get_type, vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; if(H5VL__file_get(vol_obj->data, vol_obj->connector->cls, get_type, dxpl_id, req, arguments) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTGET, FAIL, "file get failed") @@ -2922,7 +2922,7 @@ H5VL_file_get(const H5VL_object_t *vol_obj, H5VL_file_get_t get_type, done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -3022,7 +3022,7 @@ H5VL_file_specific(const H5VL_object_t *vol_obj, H5VL_file_specific_t specific_t FUNC_ENTER_NOAPI(FAIL) /* Start access to the varargs, so they are available in all situations below */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; /* Special treatment of file access check */ @@ -3033,9 +3033,9 @@ H5VL_file_specific(const H5VL_object_t *vol_obj, H5VL_file_specific_t specific_t hid_t fapl_id; /* File access property list for accessing the file */ /* Get the file access property list to access the file */ - va_copy(tmp_args, arguments); + HDva_copy(tmp_args, arguments); fapl_id = va_arg(tmp_args, hid_t); - va_end(tmp_args); + HDva_end(tmp_args); /* Get the VOL info from the FAPL */ if(NULL == (plist = (H5P_genplist_t *)H5I_object(fapl_id))) @@ -3067,7 +3067,7 @@ H5VL_file_specific(const H5VL_object_t *vol_obj, H5VL_file_specific_t specific_t done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -3170,7 +3170,7 @@ H5VL_file_optional(const H5VL_object_t *vol_obj, hid_t dxpl_id, void **req, ...) vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; if(H5VL__file_optional(vol_obj->data, vol_obj->connector->cls, dxpl_id, req, arguments) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTOPERATE, FAIL, "file optional failed") @@ -3178,7 +3178,7 @@ H5VL_file_optional(const H5VL_object_t *vol_obj, hid_t dxpl_id, void **req, ...) done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -3593,7 +3593,7 @@ H5VL_group_get(const H5VL_object_t *vol_obj, H5VL_group_get_t get_type, vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; if(H5VL__group_get(vol_obj->data, vol_obj->connector->cls, get_type, dxpl_id, req, arguments) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTGET, FAIL, "group get failed") @@ -3601,7 +3601,7 @@ H5VL_group_get(const H5VL_object_t *vol_obj, H5VL_group_get_t get_type, done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -3705,7 +3705,7 @@ H5VL_group_specific(const H5VL_object_t *vol_obj, H5VL_group_specific_t specific vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; if(H5VL__group_specific(vol_obj->data, vol_obj->connector->cls, specific_type, dxpl_id, req, arguments) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTOPERATE, FAIL, "unable to execute group specific callback") @@ -3713,7 +3713,7 @@ H5VL_group_specific(const H5VL_object_t *vol_obj, H5VL_group_specific_t specific done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -3816,7 +3816,7 @@ H5VL_group_optional(const H5VL_object_t *vol_obj, hid_t dxpl_id, void **req, ... vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; if((ret_value = H5VL__group_optional(vol_obj->data, vol_obj->connector->cls, dxpl_id, req, arguments)) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTOPERATE, FAIL, "unable to execute group optional callback") @@ -3824,7 +3824,7 @@ H5VL_group_optional(const H5VL_object_t *vol_obj, hid_t dxpl_id, void **req, ... done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -4372,7 +4372,7 @@ H5VL_link_get(const H5VL_object_t *vol_obj, const H5VL_loc_params_t *loc_params, vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; if(H5VL__link_get(vol_obj->data, loc_params, vol_obj->connector->cls, get_type, dxpl_id, req, arguments) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTGET, FAIL, "link get failed") @@ -4380,7 +4380,7 @@ H5VL_link_get(const H5VL_object_t *vol_obj, const H5VL_loc_params_t *loc_params, done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -4484,7 +4484,7 @@ H5VL_link_specific(const H5VL_object_t *vol_obj, const H5VL_loc_params_t *loc_pa vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; if((ret_value = H5VL__link_specific(vol_obj->data, loc_params, vol_obj->connector->cls, specific_type, dxpl_id, req, arguments)) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTOPERATE, FAIL, "unable to execute link specific callback") @@ -4492,7 +4492,7 @@ H5VL_link_specific(const H5VL_object_t *vol_obj, const H5VL_loc_params_t *loc_pa done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -4595,7 +4595,7 @@ H5VL_link_optional(const H5VL_object_t *vol_obj, hid_t dxpl_id, void **req, ...) vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; if(H5VL__link_optional(vol_obj->data, vol_obj->connector->cls, dxpl_id, req, arguments) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTOPERATE, FAIL, "unable to execute link optional callback") @@ -4603,7 +4603,7 @@ H5VL_link_optional(const H5VL_object_t *vol_obj, hid_t dxpl_id, void **req, ...) done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -4924,7 +4924,7 @@ H5VL_object_get(const H5VL_object_t *vol_obj, const H5VL_loc_params_t *loc_param vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; if(H5VL__object_get(vol_obj->data, loc_params, vol_obj->connector->cls, get_type, dxpl_id, req, arguments) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTGET, FAIL, "get failed") @@ -4932,7 +4932,7 @@ H5VL_object_get(const H5VL_object_t *vol_obj, const H5VL_loc_params_t *loc_param done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -5037,7 +5037,7 @@ H5VL_object_specific(const H5VL_object_t *vol_obj, const H5VL_loc_params_t *loc_ vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; if((ret_value = H5VL__object_specific(vol_obj->data, loc_params, vol_obj->connector->cls, specific_type, dxpl_id, req, arguments)) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTOPERATE, FAIL, "object specific failed") @@ -5045,7 +5045,7 @@ H5VL_object_specific(const H5VL_object_t *vol_obj, const H5VL_loc_params_t *loc_ done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -5152,7 +5152,7 @@ H5VL_object_optional(const H5VL_object_t *vol_obj, hid_t dxpl_id, void **req, .. vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; if(H5VL__object_optional(vol_obj->data, vol_obj->connector->cls, dxpl_id, req, arguments) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTOPERATE, FAIL, "unable to execute object optional callback") @@ -5160,7 +5160,7 @@ H5VL_object_optional(const H5VL_object_t *vol_obj, hid_t dxpl_id, void **req, .. done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -5473,7 +5473,7 @@ H5VL_datatype_get(const H5VL_object_t *vol_obj, H5VL_datatype_get_t get_type, vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; if(H5VL__datatype_get(vol_obj->data, vol_obj->connector->cls, get_type, dxpl_id, req, arguments) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTGET, FAIL, "datatype get failed") @@ -5481,7 +5481,7 @@ H5VL_datatype_get(const H5VL_object_t *vol_obj, H5VL_datatype_get_t get_type, done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -5589,7 +5589,7 @@ H5VL_datatype_specific(const H5VL_object_t *vol_obj, H5VL_datatype_specific_t sp vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; if(H5VL__datatype_specific(vol_obj->data, vol_obj->connector->cls, specific_type, dxpl_id, req, arguments) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTOPERATE, FAIL, "unable to execute datatype specific callback") @@ -5597,7 +5597,7 @@ H5VL_datatype_specific(const H5VL_object_t *vol_obj, H5VL_datatype_specific_t sp done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -5701,7 +5701,7 @@ H5VL_datatype_optional(const H5VL_object_t *vol_obj, hid_t dxpl_id, vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, req); + HDva_start(arguments, req); arg_started = TRUE; if(H5VL__datatype_optional(vol_obj->data, vol_obj->connector->cls, dxpl_id, req, arguments) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTOPERATE, FAIL, "unable to execute datatype optional callback") @@ -5709,7 +5709,7 @@ H5VL_datatype_optional(const H5VL_object_t *vol_obj, hid_t dxpl_id, done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -6265,7 +6265,7 @@ H5VL_request_specific(const H5VL_object_t *vol_obj, vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, specific_type); + HDva_start(arguments, specific_type); arg_started = TRUE; if((ret_value = H5VL__request_specific(vol_obj->data, vol_obj->connector->cls, specific_type, arguments)) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTOPERATE, FAIL, "unable to execute asynchronous request specific callback") @@ -6273,7 +6273,7 @@ H5VL_request_specific(const H5VL_object_t *vol_obj, done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) @@ -6379,7 +6379,7 @@ H5VL_request_optional(const H5VL_object_t *vol_obj, ...) vol_wrapper_set = TRUE; /* Call the corresponding internal VOL routine */ - va_start(arguments, vol_obj); + HDva_start(arguments, vol_obj); arg_started = TRUE; if((ret_value = H5VL__request_optional(vol_obj->data, vol_obj->connector->cls, arguments)) < 0) HGOTO_ERROR(H5E_VOL, H5E_CANTOPERATE, FAIL, "unable to execute asynchronous request optional callback") @@ -6387,7 +6387,7 @@ H5VL_request_optional(const H5VL_object_t *vol_obj, ...) done: /* End access to the va_list, if we started it */ if(arg_started) - va_end(arguments); + HDva_end(arguments); /* Reset object wrapping info in API context */ if(vol_wrapper_set && H5VL_reset_vol_wrapper() < 0) diff --git a/src/H5VLint.c b/src/H5VLint.c index 55f51d7..17dfc1f 100644 --- a/src/H5VLint.c +++ b/src/H5VLint.c @@ -625,9 +625,12 @@ H5VL_register_connector(const void *_cls, hbool_t app_ref, hid_t vipl_id) HGOTO_ERROR(H5E_VOL, H5E_CANTREGISTER, H5I_INVALID_HID, "unable to register VOL connector ID") done: - if (ret_value < 0) - if (saved) - H5FL_FREE(H5VL_class_t, saved); + if (ret_value < 0 && saved) { + if (saved->name) + H5MM_xfree(saved->name); + + H5FL_FREE(H5VL_class_t, saved); + } FUNC_LEAVE_NOAPI(ret_value) } /* end H5VL_register_connector() */ diff --git a/src/H5VLnative.c b/src/H5VLnative.c index 3fc1a7c..0339205 100644 --- a/src/H5VLnative.c +++ b/src/H5VLnative.c @@ -482,7 +482,7 @@ H5VL__native_attr_get(void *obj, H5VL_attr_get_t get_type, /* H5Aget_space */ case H5VL_ATTR_GET_SPACE: { - hid_t *ret_id = va_arg(arguments, hid_t *); + hid_t *ret_id = HDva_arg(arguments, hid_t *); H5A_t *attr = (H5A_t *)obj; if((*ret_id = H5A_get_space(attr)) < 0) @@ -493,7 +493,7 @@ H5VL__native_attr_get(void *obj, H5VL_attr_get_t get_type, /* H5Aget_type */ case H5VL_ATTR_GET_TYPE: { - hid_t *ret_id = va_arg(arguments, hid_t *); + hid_t *ret_id = HDva_arg(arguments, hid_t *); H5A_t *attr = (H5A_t *)obj; if((*ret_id = H5A__get_type(attr)) < 0) @@ -504,7 +504,7 @@ H5VL__native_attr_get(void *obj, H5VL_attr_get_t get_type, /* H5Aget_create_plist */ case H5VL_ATTR_GET_ACPL: { - hid_t *ret_id = va_arg(arguments, hid_t *); + hid_t *ret_id = HDva_arg(arguments, hid_t *); H5A_t *attr = (H5A_t *)obj; if((*ret_id = H5A__get_create_plist(attr)) < 0) @@ -516,10 +516,10 @@ H5VL__native_attr_get(void *obj, H5VL_attr_get_t get_type, /* H5Aget_name */ case H5VL_ATTR_GET_NAME: { - const H5VL_loc_params_t *loc_params = va_arg(arguments, const H5VL_loc_params_t *); - size_t buf_size = va_arg(arguments, size_t); - char *buf = va_arg(arguments, char *); - ssize_t *ret_val = va_arg(arguments, ssize_t *); + const H5VL_loc_params_t *loc_params = HDva_arg(arguments, const H5VL_loc_params_t *); + size_t buf_size = HDva_arg(arguments, size_t); + char *buf = HDva_arg(arguments, char *); + ssize_t *ret_val = HDva_arg(arguments, ssize_t *); H5A_t *attr = NULL; if(H5VL_OBJECT_BY_SELF == loc_params->type) { @@ -565,8 +565,8 @@ H5VL__native_attr_get(void *obj, H5VL_attr_get_t get_type, /* H5Aget_info */ case H5VL_ATTR_GET_INFO: { - const H5VL_loc_params_t *loc_params = va_arg(arguments, const H5VL_loc_params_t *); - H5A_info_t *ainfo = va_arg(arguments, H5A_info_t *); + const H5VL_loc_params_t *loc_params = HDva_arg(arguments, const H5VL_loc_params_t *); + H5A_info_t *ainfo = HDva_arg(arguments, H5A_info_t *); H5A_t *attr = NULL; if(H5VL_OBJECT_BY_SELF == loc_params->type) { @@ -575,7 +575,7 @@ H5VL__native_attr_get(void *obj, H5VL_attr_get_t get_type, HGOTO_ERROR(H5E_ARGS, H5E_CANTGET, FAIL, "can't get attribute info") } else if(H5VL_OBJECT_BY_NAME == loc_params->type) { - char *attr_name = va_arg(arguments, char *); + char *attr_name = HDva_arg(arguments, char *); H5G_loc_t loc; /* check arguments */ @@ -624,7 +624,7 @@ H5VL__native_attr_get(void *obj, H5VL_attr_get_t get_type, case H5VL_ATTR_GET_STORAGE_SIZE: { - hsize_t *ret = va_arg(arguments, hsize_t *); + hsize_t *ret = HDva_arg(arguments, hsize_t *); H5A_t *attr = (H5A_t *)obj; /* Set return value */ @@ -670,7 +670,7 @@ H5VL__native_attr_specific(void *obj, const H5VL_loc_params_t *loc_params, H5VL_ switch(specific_type) { case H5VL_ATTR_DELETE: { - char *attr_name = va_arg(arguments, char *); + char *attr_name = HDva_arg(arguments, char *); if(H5VL_OBJECT_BY_SELF == loc_params->type) { /* H5Adelete */ @@ -698,8 +698,8 @@ H5VL__native_attr_specific(void *obj, const H5VL_loc_params_t *loc_params, H5VL_ case H5VL_ATTR_EXISTS: { - const char *attr_name = va_arg(arguments, const char *); - htri_t *ret = va_arg(arguments, htri_t *); + const char *attr_name = HDva_arg(arguments, const char *); + htri_t *ret = HDva_arg(arguments, htri_t *); if(loc_params->type == H5VL_OBJECT_BY_SELF) { /* H5Aexists */ /* Check if the attribute exists */ @@ -718,11 +718,11 @@ H5VL__native_attr_specific(void *obj, const H5VL_loc_params_t *loc_params, H5VL_ case H5VL_ATTR_ITER: { - H5_index_t idx_type = va_arg(arguments, H5_index_t); - H5_iter_order_t order = va_arg(arguments, H5_iter_order_t); - hsize_t *idx = va_arg(arguments, hsize_t *); - H5A_operator2_t op = va_arg(arguments, H5A_operator2_t); - void *op_data = va_arg(arguments, void *); + H5_index_t idx_type = HDva_arg(arguments, H5_index_t); + H5_iter_order_t order = HDva_arg(arguments, H5_iter_order_t); + hsize_t *idx = HDva_arg(arguments, hsize_t *); + H5A_operator2_t op = HDva_arg(arguments, H5A_operator2_t); + void *op_data = HDva_arg(arguments, void *); if(loc_params->type == H5VL_OBJECT_BY_SELF) { /* H5Aiterate2 */ /* Iterate over attributes */ @@ -742,8 +742,8 @@ H5VL__native_attr_specific(void *obj, const H5VL_loc_params_t *loc_params, H5VL_ /* H5Arename/rename_by_name */ case H5VL_ATTR_RENAME: { - const char *old_name = va_arg(arguments, const char *); - const char *new_name = va_arg(arguments, const char *); + const char *old_name = HDva_arg(arguments, const char *); + const char *new_name = HDva_arg(arguments, const char *); if(loc_params->type == H5VL_OBJECT_BY_SELF) { /* H5Arename */ /* Call attribute rename routine */ @@ -782,20 +782,20 @@ static herr_t H5VL__native_attr_optional(void H5_ATTR_UNUSED *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR_UNUSED **req, va_list arguments) { - H5VL_attr_optional_t optional_type; + H5VL_native_attr_optional_t optional_type; herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_STATIC - optional_type = va_arg(arguments, H5VL_attr_optional_t); + optional_type = HDva_arg(arguments, H5VL_native_attr_optional_t); switch(optional_type) { #ifndef H5_NO_DEPRECATED_SYMBOLS - case H5VL_ATTR_ITERATE_OLD: + case H5VL_NATIVE_ATTR_ITERATE_OLD: { - hid_t loc_id = va_arg(arguments, hid_t); - unsigned *attr_num = va_arg(arguments, unsigned *); - H5A_operator1_t op = va_arg(arguments, H5A_operator1_t); - void *op_data = va_arg(arguments, void *); + hid_t loc_id = HDva_arg(arguments, hid_t); + unsigned *attr_num = HDva_arg(arguments, unsigned *); + H5A_operator1_t op = HDva_arg(arguments, H5A_operator1_t); + void *op_data = HDva_arg(arguments, void *); /* Call the actual iteration routine */ if((ret_value = H5A__iterate_old(loc_id, attr_num, op, op_data)) < 0) @@ -803,6 +803,13 @@ H5VL__native_attr_optional(void H5_ATTR_UNUSED *obj, hid_t H5_ATTR_UNUSED dxpl_i break; } +#else + /* XXX: This case only exists because this is the only attribute optional + * value and we can't have empty enums. Delete it when we have another + * attribute optional enum value. + */ + case H5VL_NATIVE_ATTR_ITERATE_OLD: + HGOTO_ERROR(H5E_VOL, H5E_UNSUPPORTED, FAIL, "H5VL_NATIVE_ATTR_ITERATE_OLD is not a valid value when the library is built without deprecated routines") #endif /* H5_NO_DEPRECATED_SYMBOLS */ default: @@ -1059,7 +1066,7 @@ H5VL__native_dataset_get(void *obj, H5VL_dataset_get_t get_type, /* H5Dget_space */ case H5VL_DATASET_GET_SPACE: { - hid_t *ret_id = va_arg(arguments, hid_t *); + hid_t *ret_id = HDva_arg(arguments, hid_t *); if((*ret_id = H5D__get_space(dset)) < 0) HGOTO_ERROR(H5E_ARGS, H5E_CANTGET, FAIL, "can't get space ID of dataset") @@ -1070,7 +1077,7 @@ H5VL__native_dataset_get(void *obj, H5VL_dataset_get_t get_type, /* H5Dget_space_statuc */ case H5VL_DATASET_GET_SPACE_STATUS: { - H5D_space_status_t *allocation = va_arg(arguments, H5D_space_status_t *); + H5D_space_status_t *allocation = HDva_arg(arguments, H5D_space_status_t *); /* Read data space address and return */ if(H5D__get_space_status(dset, allocation) < 0) @@ -1082,7 +1089,7 @@ H5VL__native_dataset_get(void *obj, H5VL_dataset_get_t get_type, /* H5Dget_type */ case H5VL_DATASET_GET_TYPE: { - hid_t *ret_id = va_arg(arguments, hid_t *); + hid_t *ret_id = HDva_arg(arguments, hid_t *); if((*ret_id = H5D__get_type(dset)) < 0) HGOTO_ERROR(H5E_ARGS, H5E_CANTGET, FAIL, "can't get datatype ID of dataset") @@ -1093,7 +1100,7 @@ H5VL__native_dataset_get(void *obj, H5VL_dataset_get_t get_type, /* H5Dget_create_plist */ case H5VL_DATASET_GET_DCPL: { - hid_t *ret_id = va_arg(arguments, hid_t *); + hid_t *ret_id = HDva_arg(arguments, hid_t *); if((*ret_id = H5D_get_create_plist(dset)) < 0) HGOTO_ERROR(H5E_ARGS, H5E_CANTGET, FAIL, "can't get creation property list for dataset") @@ -1104,7 +1111,7 @@ H5VL__native_dataset_get(void *obj, H5VL_dataset_get_t get_type, /* H5Dget_access_plist */ case H5VL_DATASET_GET_DAPL: { - hid_t *ret_id = va_arg(arguments, hid_t *); + hid_t *ret_id = HDva_arg(arguments, hid_t *); if((*ret_id = H5D_get_access_plist(dset)) < 0) HGOTO_ERROR(H5E_ARGS, H5E_CANTGET, FAIL, "can't get access property list for dataset") @@ -1115,7 +1122,7 @@ H5VL__native_dataset_get(void *obj, H5VL_dataset_get_t get_type, /* H5Dget_storage_size */ case H5VL_DATASET_GET_STORAGE_SIZE: { - hsize_t *ret = va_arg(arguments, hsize_t *); + hsize_t *ret = HDva_arg(arguments, hsize_t *); /* Set return value */ if(H5D__get_storage_size(dset, ret) < 0) @@ -1126,7 +1133,7 @@ H5VL__native_dataset_get(void *obj, H5VL_dataset_get_t get_type, /* H5Dget_offset */ case H5VL_DATASET_GET_OFFSET: { - haddr_t *ret = va_arg(arguments, haddr_t *); + haddr_t *ret = HDva_arg(arguments, haddr_t *); /* Set return value */ *ret = H5D__get_offset(dset); @@ -1166,7 +1173,7 @@ H5VL__native_dataset_specific(void *obj, H5VL_dataset_specific_t specific_type, /* H5Dspecific_space */ case H5VL_DATASET_SET_EXTENT: { - const hsize_t *size = va_arg(arguments, const hsize_t *); + const hsize_t *size = HDva_arg(arguments, const hsize_t *); if(H5D__set_extent(dset, size) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, FAIL, "unable to set extent of dataset") @@ -1175,7 +1182,7 @@ H5VL__native_dataset_specific(void *obj, H5VL_dataset_specific_t specific_type, case H5VL_DATASET_FLUSH: { - hid_t dset_id = va_arg(arguments, hid_t); + hid_t dset_id = HDva_arg(arguments, hid_t); /* Flush the dataset */ if(H5D__flush(dset, dset_id) < 0) @@ -1186,7 +1193,7 @@ H5VL__native_dataset_specific(void *obj, H5VL_dataset_specific_t specific_type, case H5VL_DATASET_REFRESH: { - hid_t dset_id = va_arg(arguments, hid_t); + hid_t dset_id = HDva_arg(arguments, hid_t); /* Refresh the dataset */ if((H5D__refresh(dset_id, dset)) < 0) @@ -1218,13 +1225,13 @@ H5VL__native_dataset_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR_UNUSED **req, va_list arguments) { H5D_t *dset = NULL; /* Dataset */ - H5VL_dataset_optional_t optional_type = va_arg(arguments, H5VL_dataset_optional_t); + H5VL_native_dataset_optional_t optional_type = HDva_arg(arguments, H5VL_native_dataset_optional_t); herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_STATIC switch(optional_type) { - case H5VL_DATASET_FORMAT_CONVERT: + case H5VL_NATIVE_DATASET_FORMAT_CONVERT: { dset = (H5D_t *)obj; @@ -1259,9 +1266,9 @@ H5VL__native_dataset_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, break; } - case H5VL_DATASET_GET_CHUNK_INDEX_TYPE: + case H5VL_NATIVE_DATASET_GET_CHUNK_INDEX_TYPE: { - H5D_chunk_index_t *idx_type = va_arg(arguments, H5D_chunk_index_t *); + H5D_chunk_index_t *idx_type = HDva_arg(arguments, H5D_chunk_index_t *); dset = (H5D_t *)obj; @@ -1275,10 +1282,10 @@ H5VL__native_dataset_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, break; } - case H5VL_DATASET_GET_CHUNK_STORAGE_SIZE: + case H5VL_NATIVE_DATASET_GET_CHUNK_STORAGE_SIZE: { - hsize_t *offset = va_arg(arguments, hsize_t *); - hsize_t *chunk_nbytes = va_arg(arguments, hsize_t *); + hsize_t *offset = HDva_arg(arguments, hsize_t *); + hsize_t *chunk_nbytes = HDva_arg(arguments, hsize_t *); dset = (H5D_t *)obj; @@ -1293,11 +1300,11 @@ H5VL__native_dataset_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, break; } - case H5VL_DATASET_CHUNK_READ: + case H5VL_NATIVE_DATASET_CHUNK_READ: { - const hsize_t *offset = va_arg(arguments, hsize_t *); - uint32_t *filters = va_arg(arguments, uint32_t *); - void *buf = va_arg(arguments, void *); + const hsize_t *offset = HDva_arg(arguments, hsize_t *); + uint32_t *filters = HDva_arg(arguments, uint32_t *); + void *buf = HDva_arg(arguments, void *); hsize_t offset_copy[H5O_LAYOUT_NDIMS]; /* Internal copy of chunk offset */ dset = (H5D_t *)obj; @@ -1321,12 +1328,12 @@ H5VL__native_dataset_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, break; } - case H5VL_DATASET_CHUNK_WRITE: + case H5VL_NATIVE_DATASET_CHUNK_WRITE: { - uint32_t filters = va_arg(arguments, uint32_t); - const hsize_t *offset = va_arg(arguments, const hsize_t *); - uint32_t data_size_32 = va_arg(arguments, uint32_t); - const void *buf = va_arg(arguments, const void *); + uint32_t filters = HDva_arg(arguments, uint32_t); + const hsize_t *offset = HDva_arg(arguments, const hsize_t *); + uint32_t data_size_32 = HDva_arg(arguments, uint32_t); + const void *buf = HDva_arg(arguments, const void *); hsize_t offset_copy[H5O_LAYOUT_NDIMS]; /* Internal copy of chunk offset */ dset = (H5D_t *)obj; @@ -1487,7 +1494,7 @@ H5VL__native_file_get(void *obj, H5VL_file_get_t get_type, case H5VL_FILE_GET_FAPL: { H5P_genplist_t *new_plist; /* New property list */ - hid_t *plist_id = va_arg(arguments, hid_t *); + hid_t *plist_id = HDva_arg(arguments, hid_t *); f = (H5F_t *)obj; @@ -1504,7 +1511,7 @@ H5VL__native_file_get(void *obj, H5VL_file_get_t get_type, case H5VL_FILE_GET_FCPL: { H5P_genplist_t *plist; /* Property list */ - hid_t *plist_id = va_arg(arguments, hid_t *); + hid_t *plist_id = HDva_arg(arguments, hid_t *); f = (H5F_t *)obj; if(NULL == (plist = (H5P_genplist_t *)H5I_object(f->shared->fcpl_id))) @@ -1520,8 +1527,8 @@ H5VL__native_file_get(void *obj, H5VL_file_get_t get_type, /* H5Fget_obj_count */ case H5VL_FILE_GET_OBJ_COUNT: { - unsigned types = va_arg(arguments, unsigned); - ssize_t *ret = va_arg(arguments, ssize_t *); + unsigned types = HDva_arg(arguments, unsigned); + ssize_t *ret = HDva_arg(arguments, ssize_t *); size_t obj_count = 0; /* Number of opened objects */ f = (H5F_t *)obj; @@ -1537,10 +1544,10 @@ H5VL__native_file_get(void *obj, H5VL_file_get_t get_type, /* H5Fget_obj_ids */ case H5VL_FILE_GET_OBJ_IDS: { - unsigned types = va_arg(arguments, unsigned); - size_t max_objs = va_arg(arguments, size_t); - hid_t *oid_list = va_arg(arguments, hid_t *); - ssize_t *ret = va_arg(arguments, ssize_t *); + unsigned types = HDva_arg(arguments, unsigned); + size_t max_objs = HDva_arg(arguments, size_t); + hid_t *oid_list = HDva_arg(arguments, hid_t *); + ssize_t *ret = HDva_arg(arguments, ssize_t *); size_t obj_count = 0; /* Number of opened objects */ f = (H5F_t *)obj; @@ -1556,7 +1563,7 @@ H5VL__native_file_get(void *obj, H5VL_file_get_t get_type, /* H5Fget_intent */ case H5VL_FILE_GET_INTENT: { - unsigned *intent_flags = va_arg(arguments, unsigned *); + unsigned *intent_flags = HDva_arg(arguments, unsigned *); f = (H5F_t *)obj; @@ -1585,10 +1592,10 @@ H5VL__native_file_get(void *obj, H5VL_file_get_t get_type, /* H5Fget_name */ case H5VL_FILE_GET_NAME: { - H5I_type_t type = va_arg(arguments, H5I_type_t); - size_t size = va_arg(arguments, size_t); - char *name = va_arg(arguments, char *); - ssize_t *ret = va_arg(arguments, ssize_t *); + H5I_type_t type = HDva_arg(arguments, H5I_type_t); + size_t size = HDva_arg(arguments, size_t); + char *name = HDva_arg(arguments, char *); + ssize_t *ret = HDva_arg(arguments, ssize_t *); size_t len; if(NULL == (f = H5F__get_file(obj, type))) @@ -1637,8 +1644,8 @@ H5VL__native_file_specific(void *obj, H5VL_file_specific_t specific_type, /* H5Fflush */ case H5VL_FILE_FLUSH: { - H5I_type_t type = va_arg(arguments, H5I_type_t); - H5F_scope_t scope = va_arg(arguments, H5F_scope_t); + H5I_type_t type = HDva_arg(arguments, H5I_type_t); + H5F_scope_t scope = HDva_arg(arguments, H5F_scope_t); H5F_t *f = NULL; /* File to flush */ /* Get the file for the object */ @@ -1670,7 +1677,7 @@ H5VL__native_file_specific(void *obj, H5VL_file_specific_t specific_type, /* H5Freopen */ case H5VL_FILE_REOPEN: { - void **ret = va_arg(arguments, void **); + void **ret = HDva_arg(arguments, void **); H5F_t *new_file = NULL; /* Reopen the file through the VOL connector */ @@ -1685,10 +1692,10 @@ H5VL__native_file_specific(void *obj, H5VL_file_specific_t specific_type, /* H5Fmount */ case H5VL_FILE_MOUNT: { - H5I_type_t type = va_arg(arguments, H5I_type_t); - const char *name = va_arg(arguments, const char *); - H5F_t *child = va_arg(arguments, H5F_t *); - hid_t plist_id = va_arg(arguments, hid_t); + H5I_type_t type = HDva_arg(arguments, H5I_type_t); + const char *name = HDva_arg(arguments, const char *); + H5F_t *child = HDva_arg(arguments, H5F_t *); + hid_t plist_id = HDva_arg(arguments, hid_t); H5G_loc_t loc; if(H5G_loc_real(obj, type, &loc) < 0) @@ -1704,8 +1711,8 @@ H5VL__native_file_specific(void *obj, H5VL_file_specific_t specific_type, /* H5Funmount */ case H5VL_FILE_UNMOUNT: { - H5I_type_t type = va_arg(arguments, H5I_type_t); - const char *name = va_arg(arguments, const char *); + H5I_type_t type = HDva_arg(arguments, H5I_type_t); + const char *name = HDva_arg(arguments, const char *); H5G_loc_t loc; if(H5G_loc_real(obj, type, &loc) < 0) @@ -1721,9 +1728,9 @@ H5VL__native_file_specific(void *obj, H5VL_file_specific_t specific_type, /* H5Fis_accessible */ case H5VL_FILE_IS_ACCESSIBLE: { - hid_t fapl_id = va_arg(arguments, hid_t); - const char *name = va_arg(arguments, const char *); - htri_t *ret = va_arg(arguments, htri_t *); + hid_t fapl_id = HDva_arg(arguments, hid_t); + const char *name = HDva_arg(arguments, const char *); + htri_t *ret = HDva_arg(arguments, htri_t *); /* Call private routine */ if((*ret = H5F__is_hdf5(name, fapl_id)) < 0) @@ -1734,8 +1741,8 @@ H5VL__native_file_specific(void *obj, H5VL_file_specific_t specific_type, /* H5Fcreate / H5Fopen */ case H5VL_FILE_CACHE_VOL_CONN: { - hid_t vol_id = va_arg(arguments, hid_t); - void *vol_info = va_arg(arguments, void *); + hid_t vol_id = HDva_arg(arguments, hid_t); + void *vol_info = HDva_arg(arguments, void *); /* Call private routine */ if(H5F__set_vol_conn((H5F_t *)obj, vol_id, vol_info) < 0) @@ -1765,7 +1772,7 @@ static herr_t H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR_UNUSED **req, va_list arguments) { H5F_t *f = NULL; /* File */ - H5VL_file_optional_t optional_type = va_arg(arguments, H5VL_file_optional_t); + H5VL_native_file_optional_t optional_type = HDva_arg(arguments, H5VL_native_file_optional_t); herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_STATIC @@ -1773,11 +1780,11 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR f = (H5F_t *)obj; switch(optional_type) { /* H5Fget_filesize */ - case H5VL_FILE_GET_SIZE: + case H5VL_NATIVE_FILE_GET_SIZE: { haddr_t max_eof_eoa; /* Maximum of the EOA & EOF */ haddr_t base_addr; /* Base address for the file */ - hsize_t *size = va_arg(arguments, hsize_t *); + hsize_t *size = HDva_arg(arguments, hsize_t *); /* Go get the actual file size */ if(H5F__get_max_eof_eoa(f, &max_eof_eoa) < 0) @@ -1792,11 +1799,11 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR } /* H5Fget_file_image */ - case H5VL_FILE_GET_FILE_IMAGE: + case H5VL_NATIVE_FILE_GET_FILE_IMAGE: { - void *buf_ptr = va_arg(arguments, void *); - ssize_t *ret = va_arg(arguments, ssize_t *); - size_t buf_len = va_arg(arguments, size_t ); + void *buf_ptr = HDva_arg(arguments, void *); + ssize_t *ret = HDva_arg(arguments, ssize_t *); + size_t buf_len = HDva_arg(arguments, size_t ); /* Do the actual work */ if((*ret = H5F__get_file_image(f, buf_ptr, buf_len)) < 0) @@ -1805,10 +1812,10 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR } /* H5Fget_freespace */ - case H5VL_FILE_GET_FREE_SPACE: + case H5VL_NATIVE_FILE_GET_FREE_SPACE: { hsize_t tot_space; /* Amount of free space in the file */ - hssize_t *ret = va_arg(arguments, hssize_t *); + hssize_t *ret = HDva_arg(arguments, hssize_t *); /* Go get the actual amount of free space in the file */ if(H5MF_get_freespace(f, &tot_space, NULL) < 0) @@ -1817,12 +1824,13 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR break; } - case H5VL_FILE_GET_FREE_SECTIONS: + /* H5Fget_free_sections */ + case H5VL_NATIVE_FILE_GET_FREE_SECTIONS: { - H5F_sect_info_t *sect_info = va_arg(arguments, H5F_sect_info_t *); - ssize_t *ret = va_arg(arguments, ssize_t *); - H5F_mem_t type = va_arg(arguments, H5F_mem_t); - size_t nsects = va_arg(arguments, size_t); + H5F_sect_info_t *sect_info = HDva_arg(arguments, H5F_sect_info_t *); + ssize_t *ret = HDva_arg(arguments, ssize_t *); + H5F_mem_t type = HDva_arg(arguments, H5F_mem_t); + size_t nsects = HDva_arg(arguments, size_t); /* Go get the free-space section information in the file */ if((*ret = H5MF_get_free_sections(f, type, nsects, sect_info)) < 0) @@ -1830,11 +1838,11 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR break; } - /* H5Fget_info2 */ - case H5VL_FILE_GET_INFO: + /* H5Fget_info1/2 */ + case H5VL_NATIVE_FILE_GET_INFO: { - H5I_type_t type = va_arg(arguments, H5I_type_t); - H5F_info2_t *finfo = va_arg(arguments, H5F_info2_t *); + H5I_type_t type = HDva_arg(arguments, H5I_type_t); + H5F_info2_t *finfo = HDva_arg(arguments, H5F_info2_t *); /* Get the file struct. This call is careful to not return the file pointer * for the top file in a mount hierarchy. @@ -1850,9 +1858,9 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR } /* H5Fget_mdc_config */ - case H5VL_FILE_GET_MDC_CONF: + case H5VL_NATIVE_FILE_GET_MDC_CONF: { - H5AC_cache_config_t *config_ptr = va_arg(arguments, H5AC_cache_config_t *); + H5AC_cache_config_t *config_ptr = HDva_arg(arguments, H5AC_cache_config_t *); /* Go get the resize configuration */ if(H5AC_get_cache_auto_resize_config(f->shared->cache, config_ptr) < 0) @@ -1861,9 +1869,9 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR } /* H5Fget_mdc_hit_rate */ - case H5VL_FILE_GET_MDC_HR: + case H5VL_NATIVE_FILE_GET_MDC_HR: { - double *hit_rate_ptr = va_arg(arguments, double *); + double *hit_rate_ptr = HDva_arg(arguments, double *); /* Go get the current hit rate */ if(H5AC_get_cache_hit_rate(f->shared->cache, hit_rate_ptr) < 0) @@ -1872,12 +1880,12 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR } /* H5Fget_mdc_size */ - case H5VL_FILE_GET_MDC_SIZE: + case H5VL_NATIVE_FILE_GET_MDC_SIZE: { - size_t *max_size_ptr = va_arg(arguments, size_t *); - size_t *min_clean_size_ptr = va_arg(arguments, size_t *); - size_t *cur_size_ptr = va_arg(arguments, size_t *); - int *cur_num_entries_ptr = va_arg(arguments, int *); + size_t *max_size_ptr = HDva_arg(arguments, size_t *); + size_t *min_clean_size_ptr = HDva_arg(arguments, size_t *); + size_t *cur_size_ptr = HDva_arg(arguments, size_t *); + int *cur_num_entries_ptr = HDva_arg(arguments, int *); uint32_t cur_num_entries; /* Go get the size data */ @@ -1891,10 +1899,10 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR } /* H5Fget_vfd_handle */ - case H5VL_FILE_GET_VFD_HANDLE: + case H5VL_NATIVE_FILE_GET_VFD_HANDLE: { - void **file_handle = va_arg(arguments, void **); - hid_t fapl_id = va_arg(arguments, hid_t); + void **file_handle = HDva_arg(arguments, void **); + hid_t fapl_id = HDva_arg(arguments, hid_t); /* Retrieve the VFD handle for the file */ if(H5F_get_vfd_handle(f, fapl_id, file_handle) < 0) @@ -1903,10 +1911,10 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR } /* H5Iget_file_id */ - case H5VL_FILE_GET_FILE_ID: + case H5VL_NATIVE_FILE_GET_FILE_ID: { - H5I_type_t type = va_arg(arguments, H5I_type_t); - hid_t *file_id = va_arg(arguments, hid_t *); + H5I_type_t type = HDva_arg(arguments, H5I_type_t); + hid_t *file_id = HDva_arg(arguments, hid_t *); if(NULL == (f = H5F__get_file(obj, type))) HGOTO_ERROR(H5E_FILE, H5E_BADTYPE, FAIL, "not a file or file object") @@ -1916,7 +1924,7 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR } /* H5Fclear_elink_file_cache */ - case H5VL_FILE_CLEAR_ELINK_CACHE: + case H5VL_NATIVE_FILE_CLEAR_ELINK_CACHE: { /* Release the EFC */ if(f->shared->efc) @@ -1926,7 +1934,7 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR } /* H5Freset_mdc_hit_rate_stats */ - case H5VL_FILE_RESET_MDC_HIT_RATE: + case H5VL_NATIVE_FILE_RESET_MDC_HIT_RATE: { /* Reset the hit rate statistic */ if(H5AC_reset_cache_hit_rate_stats(f->shared->cache) < 0) @@ -1934,9 +1942,10 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR break; } - case H5VL_FILE_SET_MDC_CONFIG: + /* H5Fset_mdc_config */ + case H5VL_NATIVE_FILE_SET_MDC_CONFIG: { - H5AC_cache_config_t *config_ptr = va_arg(arguments, H5AC_cache_config_t *); + H5AC_cache_config_t *config_ptr = HDva_arg(arguments, H5AC_cache_config_t *); /* set the resize configuration */ if(H5AC_set_cache_auto_resize_config(f->shared->cache, config_ptr) < 0) @@ -1944,9 +1953,10 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR break; } - case H5VL_FILE_GET_METADATA_READ_RETRY_INFO: + /* H5Fget_metadata_read_retry_info */ + case H5VL_NATIVE_FILE_GET_METADATA_READ_RETRY_INFO: { - H5F_retry_info_t *info = va_arg(arguments, H5F_retry_info_t *); + H5F_retry_info_t *info = HDva_arg(arguments, H5F_retry_info_t *); if(H5F_get_metadata_read_retry_info(f, info) < 0) HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "can't get metadata read retry info") @@ -1954,7 +1964,8 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR break; } - case H5VL_FILE_START_SWMR_WRITE: + /* H5Fstart_swmr_write */ + case H5VL_NATIVE_FILE_START_SWMR_WRITE: { if(H5F__start_swmr_write(f) < 0) HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "can't start SWMR write") @@ -1962,7 +1973,8 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR break; } - case H5VL_FILE_START_MDC_LOGGING: + /* H5Fstart_mdc_logging */ + case H5VL_NATIVE_FILE_START_MDC_LOGGING: { /* Call mdc logging function */ if(H5C_start_logging(f->shared->cache) < 0) @@ -1971,7 +1983,8 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR break; } - case H5VL_FILE_STOP_MDC_LOGGING: + /* H5Fstop_mdc_logging */ + case H5VL_NATIVE_FILE_STOP_MDC_LOGGING: { /* Call mdc logging function */ if(H5C_stop_logging(f->shared->cache) < 0) @@ -1980,10 +1993,11 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR break; } - case H5VL_FILE_GET_MDC_LOGGING_STATUS: + /* H5Fget_mdc_logging_status */ + case H5VL_NATIVE_FILE_GET_MDC_LOGGING_STATUS: { - hbool_t *is_enabled = va_arg(arguments, hbool_t *); - hbool_t *is_currently_logging = va_arg(arguments, hbool_t *); + hbool_t *is_enabled = HDva_arg(arguments, hbool_t *); + hbool_t *is_currently_logging = HDva_arg(arguments, hbool_t *); /* Call mdc logging function */ if(H5C_get_logging_status(f->shared->cache, is_enabled, is_currently_logging) < 0) @@ -1992,7 +2006,8 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR break; } - case H5VL_FILE_FORMAT_CONVERT: + /* H5Fformat_convert */ + case H5VL_NATIVE_FILE_FORMAT_CONVERT: { /* Convert the format */ if(H5F__format_convert(f) < 0) @@ -2001,7 +2016,8 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR break; } - case H5VL_FILE_RESET_PAGE_BUFFERING_STATS: + /* H5Freset_page_buffering_stats */ + case H5VL_NATIVE_FILE_RESET_PAGE_BUFFERING_STATS: { /* Sanity check */ if(NULL == f->shared->page_buf) @@ -2014,13 +2030,14 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR break; } - case H5VL_FILE_GET_PAGE_BUFFERING_STATS: + /* H5Fget_page_buffering_stats */ + case H5VL_NATIVE_FILE_GET_PAGE_BUFFERING_STATS: { - unsigned *accesses = va_arg(arguments, unsigned *); - unsigned *hits = va_arg(arguments, unsigned *); - unsigned *misses = va_arg(arguments, unsigned *); - unsigned *evictions = va_arg(arguments, unsigned *); - unsigned *bypasses = va_arg(arguments, unsigned *); + unsigned *accesses = HDva_arg(arguments, unsigned *); + unsigned *hits = HDva_arg(arguments, unsigned *); + unsigned *misses = HDva_arg(arguments, unsigned *); + unsigned *evictions = HDva_arg(arguments, unsigned *); + unsigned *bypasses = HDva_arg(arguments, unsigned *); /* Sanity check */ if(NULL == f->shared->page_buf) @@ -2033,10 +2050,11 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR break; } - case H5VL_FILE_GET_MDC_IMAGE_INFO: + /* H5Fget_mdc_image_info */ + case H5VL_NATIVE_FILE_GET_MDC_IMAGE_INFO: { - haddr_t *image_addr = va_arg(arguments, haddr_t *); - hsize_t *image_len = va_arg(arguments, hsize_t *); + haddr_t *image_addr = HDva_arg(arguments, haddr_t *); + hsize_t *image_len = HDva_arg(arguments, hsize_t *); /* Go get the address and size of the cache image */ if(H5AC_get_mdc_image_info(f->shared->cache, image_addr, image_len) < 0) @@ -2045,9 +2063,10 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR break; } - case H5VL_FILE_GET_EOA: + /* H5Fget_eoa */ + case H5VL_NATIVE_FILE_GET_EOA: { - haddr_t *eoa = va_arg(arguments, haddr_t *); + haddr_t *eoa = HDva_arg(arguments, haddr_t *); haddr_t rel_eoa; /* Relative address of EOA */ /* Sanity check */ @@ -2069,9 +2088,10 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR break; } - case H5VL_FILE_INCR_FILESIZE: + /* H5Fincrement_filesize */ + case H5VL_NATIVE_FILE_INCR_FILESIZE: { - hsize_t increment = va_arg(arguments, hsize_t); + hsize_t increment = HDva_arg(arguments, hsize_t); haddr_t max_eof_eoa; /* Maximum of the relative EOA & EOF */ /* This public routine will work only for drivers with this feature enabled.*/ @@ -2090,10 +2110,11 @@ H5VL__native_file_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR break; } - case H5VL_FILE_SET_LIBVER_BOUNDS: + /* H5Fset_latest_format, H5Fset_libver_bounds */ + case H5VL_NATIVE_FILE_SET_LIBVER_BOUNDS: { - H5F_libver_t low = va_arg(arguments, H5F_libver_t); - H5F_libver_t high = va_arg(arguments, H5F_libver_t); + H5F_libver_t low = HDva_arg(arguments, H5F_libver_t); + H5F_libver_t high = HDva_arg(arguments, H5F_libver_t); /* Call internal set_libver_bounds function */ if(H5F__set_libver_bounds(f, low, high) < 0) @@ -2296,7 +2317,7 @@ H5VL__native_group_get(void *obj, H5VL_group_get_t get_type, /* H5Gget_create_plist */ case H5VL_GROUP_GET_GCPL: { - hid_t *new_gcpl_id = va_arg(arguments, hid_t *); + hid_t *new_gcpl_id = HDva_arg(arguments, hid_t *); H5G_t *grp = (H5G_t *)obj; if((*new_gcpl_id = H5G_get_create_plist(grp)) < 0) @@ -2307,8 +2328,8 @@ H5VL__native_group_get(void *obj, H5VL_group_get_t get_type, /* H5Gget_info */ case H5VL_GROUP_GET_INFO: { - const H5VL_loc_params_t *loc_params = va_arg(arguments, const H5VL_loc_params_t *); - H5G_info_t *group_info = va_arg(arguments, H5G_info_t *); + const H5VL_loc_params_t *loc_params = HDva_arg(arguments, const H5VL_loc_params_t *); + H5G_info_t *group_info = HDva_arg(arguments, H5G_info_t *); H5G_loc_t loc; if(H5G_loc_real(obj, loc_params->obj_type, &loc) < 0) @@ -2371,7 +2392,7 @@ H5VL__native_group_specific(void *obj, H5VL_group_specific_t specific_type, switch(specific_type) { case H5VL_GROUP_FLUSH: { - hid_t group_id = va_arg(arguments, hid_t); + hid_t group_id = HDva_arg(arguments, hid_t); /* Flush object's metadata to file */ if(H5O_flush_common(&grp->oloc, group_id) < 0) @@ -2382,7 +2403,7 @@ H5VL__native_group_specific(void *obj, H5VL_group_specific_t specific_type, case H5VL_GROUP_REFRESH: { - hid_t group_id = va_arg(arguments, hid_t); + hid_t group_id = HDva_arg(arguments, hid_t); /* Call private function to refresh group object */ if((H5O_refresh_metadata(group_id, grp->oloc)) < 0) @@ -2413,22 +2434,22 @@ static herr_t H5VL__native_group_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR_UNUSED **req, va_list arguments) { - H5VL_group_optional_t optional_type; + H5VL_native_group_optional_t optional_type; herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_STATIC - optional_type = va_arg(arguments, H5VL_group_optional_t); + optional_type = HDva_arg(arguments, H5VL_native_group_optional_t); switch(optional_type) { #ifndef H5_NO_DEPRECATED_SYMBOLS /* H5Giterate (deprecated) */ - case H5VL_GROUP_ITERATE_OLD: + case H5VL_NATIVE_GROUP_ITERATE_OLD: { - const H5VL_loc_params_t *loc_params = va_arg(arguments, const H5VL_loc_params_t *); - hsize_t idx = va_arg(arguments, hsize_t); - hsize_t *last_obj = va_arg(arguments, hsize_t *); - const H5G_link_iterate_t *lnk_op = va_arg(arguments, const H5G_link_iterate_t *); - void *op_data = va_arg(arguments, void *); + const H5VL_loc_params_t *loc_params = HDva_arg(arguments, const H5VL_loc_params_t *); + hsize_t idx = HDva_arg(arguments, hsize_t); + hsize_t *last_obj = HDva_arg(arguments, hsize_t *); + const H5G_link_iterate_t *lnk_op = HDva_arg(arguments, const H5G_link_iterate_t *); + void *op_data = HDva_arg(arguments, void *); H5G_loc_t grp_loc; /* Get the location struct for the object */ @@ -2443,11 +2464,11 @@ H5VL__native_group_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, } /* H5Gget_objinfo (deprecated) */ - case H5VL_GROUP_GET_OBJINFO: + case H5VL_NATIVE_GROUP_GET_OBJINFO: { - const H5VL_loc_params_t *loc_params = va_arg(arguments, const H5VL_loc_params_t *); - hbool_t follow_link = va_arg(arguments, unsigned); - H5G_stat_t *statbuf = va_arg(arguments, H5G_stat_t *); + const H5VL_loc_params_t *loc_params = HDva_arg(arguments, const H5VL_loc_params_t *); + hbool_t follow_link = HDva_arg(arguments, unsigned); + H5G_stat_t *statbuf = HDva_arg(arguments, H5G_stat_t *); H5G_loc_t grp_loc; /* Get the location struct for the object */ @@ -2460,6 +2481,15 @@ H5VL__native_group_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, break; } +#else + /* XXX: These cases only exist because they are the only group optional + * values and we can't have empty enums. Delete them when we have + * non-deprecated group optional enum values. + */ + case H5VL_NATIVE_GROUP_ITERATE_OLD: + HGOTO_ERROR(H5E_VOL, H5E_UNSUPPORTED, FAIL, "H5VL_NATIVE_GROUP_ITERATE_OLD is not a valid value when the library is built without deprecated routines") + case H5VL_NATIVE_GROUP_GET_OBJINFO: + HGOTO_ERROR(H5E_VOL, H5E_UNSUPPORTED, FAIL, "H5VL_NATIVE_GROUP_GET_OBJINFO is not a valid value when the library is built without deprecated routines") #endif /* H5_NO_DEPRECATED_SYMBOLS */ default: @@ -2751,7 +2781,7 @@ H5VL__native_link_get(void *obj, const H5VL_loc_params_t *loc_params, H5VL_link_ /* H5Lget_info/H5Lget_info_by_idx */ case H5VL_LINK_GET_INFO: { - H5L_info_t *linfo = va_arg(arguments, H5L_info_t *); + H5L_info_t *linfo = HDva_arg(arguments, H5L_info_t *); /* Get the link information */ if(loc_params->type == H5VL_OBJECT_BY_NAME) { /* H5Lget_info */ @@ -2771,9 +2801,9 @@ H5VL__native_link_get(void *obj, const H5VL_loc_params_t *loc_params, H5VL_link_ /* H5Lget_name_by_idx */ case H5VL_LINK_GET_NAME: { - char *name = va_arg(arguments, char *); - size_t size = va_arg(arguments, size_t); - ssize_t *ret = va_arg(arguments, ssize_t *); + char *name = HDva_arg(arguments, char *); + size_t size = HDva_arg(arguments, size_t); + ssize_t *ret = HDva_arg(arguments, ssize_t *); /* Get the link name */ if((*ret = H5L_get_name_by_idx(&loc, loc_params->loc_data.loc_by_idx.name, loc_params->loc_data.loc_by_idx.idx_type, @@ -2786,8 +2816,8 @@ H5VL__native_link_get(void *obj, const H5VL_loc_params_t *loc_params, H5VL_link_ /* H5Lget_val/H5Lget_val_by_idx */ case H5VL_LINK_GET_VAL: { - void *buf = va_arg(arguments, void *); - size_t size = va_arg(arguments, size_t); + void *buf = HDva_arg(arguments, void *); + size_t size = HDva_arg(arguments, size_t); /* Get the link information */ if(loc_params->type == H5VL_OBJECT_BY_NAME) { /* H5Lget_val */ @@ -2839,7 +2869,7 @@ H5VL__native_link_specific(void *obj, const H5VL_loc_params_t *loc_params, H5VL_ switch(specific_type) { case H5VL_LINK_EXISTS: { - htri_t *ret = va_arg(arguments, htri_t *); + htri_t *ret = HDva_arg(arguments, htri_t *); H5G_loc_t loc; if(H5G_loc_real(obj, loc_params->obj_type, &loc) < 0) @@ -2854,12 +2884,12 @@ H5VL__native_link_specific(void *obj, const H5VL_loc_params_t *loc_params, H5VL_ case H5VL_LINK_ITER: { H5G_loc_t loc; - hbool_t recursive = va_arg(arguments, int); - H5_index_t idx_type = va_arg(arguments, H5_index_t); - H5_iter_order_t order = va_arg(arguments, H5_iter_order_t); - hsize_t *idx_p = va_arg(arguments, hsize_t *); - H5L_iterate_t op = va_arg(arguments, H5L_iterate_t); - void *op_data = va_arg(arguments, void *); + hbool_t recursive = HDva_arg(arguments, int); + H5_index_t idx_type = HDva_arg(arguments, H5_index_t); + H5_iter_order_t order = HDva_arg(arguments, H5_iter_order_t); + hsize_t *idx_p = HDva_arg(arguments, hsize_t *); + H5L_iterate_t op = HDva_arg(arguments, H5L_iterate_t); + void *op_data = HDva_arg(arguments, void *); /* Get the location */ if(H5G_loc_real(obj, loc_params->obj_type, &loc) < 0) @@ -3075,9 +3105,9 @@ H5VL__native_object_get(void *obj, const H5VL_loc_params_t *loc_params, H5VL_obj /* H5Rget_region */ case H5VL_REF_GET_REGION: { - hid_t *ret = va_arg(arguments, hid_t *); - H5R_type_t H5_ATTR_UNUSED ref_type = va_arg(arguments, H5R_type_t); - void *ref = va_arg(arguments, void *); + hid_t *ret = HDva_arg(arguments, hid_t *); + H5R_type_t H5_ATTR_UNUSED ref_type = HDva_arg(arguments, H5R_type_t); + void *ref = HDva_arg(arguments, void *); H5S_t *space = NULL; /* Dataspace object */ /* Get the dataspace with the correct region selected */ @@ -3094,9 +3124,9 @@ H5VL__native_object_get(void *obj, const H5VL_loc_params_t *loc_params, H5VL_obj /* H5Rget_obj_type2 */ case H5VL_REF_GET_TYPE: { - H5O_type_t *obj_type = va_arg(arguments, H5O_type_t *); - H5R_type_t ref_type = va_arg(arguments, H5R_type_t); - void *ref = va_arg(arguments, void *); + H5O_type_t *obj_type = HDva_arg(arguments, H5O_type_t *); + H5R_type_t ref_type = HDva_arg(arguments, H5R_type_t); + void *ref = HDva_arg(arguments, void *); /* Get the object information */ if(H5R__get_obj_type(loc.oloc->file, ref_type, ref, obj_type) < 0) @@ -3107,11 +3137,11 @@ H5VL__native_object_get(void *obj, const H5VL_loc_params_t *loc_params, H5VL_obj /* H5Rget_name */ case H5VL_REF_GET_NAME: { - ssize_t *ret = va_arg(arguments, ssize_t *); - char *name = va_arg(arguments, char *); - size_t size = va_arg(arguments, size_t); - H5R_type_t ref_type = va_arg(arguments, H5R_type_t); - void *ref = va_arg(arguments, void *); + ssize_t *ret = HDva_arg(arguments, ssize_t *); + char *name = HDva_arg(arguments, char *); + size_t size = HDva_arg(arguments, size_t); + H5R_type_t ref_type = HDva_arg(arguments, H5R_type_t); + void *ref = HDva_arg(arguments, void *); /* Get name */ if((*ret = H5R__get_name(loc.oloc->file, ref_type, ref, name, size)) < 0) @@ -3122,9 +3152,9 @@ H5VL__native_object_get(void *obj, const H5VL_loc_params_t *loc_params, H5VL_obj /* H5Iget_name */ case H5VL_ID_GET_NAME: { - ssize_t *ret = va_arg(arguments, ssize_t *); - char *name = va_arg(arguments, char *); - size_t size = va_arg(arguments, size_t); + ssize_t *ret = HDva_arg(arguments, ssize_t *); + char *name = HDva_arg(arguments, char *); + size_t size = HDva_arg(arguments, size_t); /* Retrieve object's name */ if((*ret = H5G_get_name(&loc, name, size, NULL)) < 0) @@ -3167,7 +3197,7 @@ H5VL__native_object_specific(void *obj, const H5VL_loc_params_t *loc_params, H5V /* H5Oincr_refcount / H5Odecr_refcount */ case H5VL_OBJECT_CHANGE_REF_COUNT: { - int update_ref = va_arg(arguments, int); + int update_ref = HDva_arg(arguments, int); H5O_loc_t *oloc = loc.oloc; if(H5O_link(oloc, update_ref) < 0) @@ -3179,7 +3209,7 @@ H5VL__native_object_specific(void *obj, const H5VL_loc_params_t *loc_params, H5V /* H5Oexists_by_name */ case H5VL_OBJECT_EXISTS: { - htri_t *ret = va_arg(arguments, htri_t *); + htri_t *ret = HDva_arg(arguments, htri_t *); if(loc_params->type == H5VL_OBJECT_BY_NAME) { /* Check if the object exists */ @@ -3193,11 +3223,11 @@ H5VL__native_object_specific(void *obj, const H5VL_loc_params_t *loc_params, H5V case H5VL_OBJECT_VISIT: { - H5_index_t idx_type = va_arg(arguments, H5_index_t); - H5_iter_order_t order = va_arg(arguments, H5_iter_order_t); - H5O_iterate_t op = va_arg(arguments, H5O_iterate_t); - void *op_data = va_arg(arguments, void *); - unsigned fields = va_arg(arguments, unsigned); + H5_index_t idx_type = HDva_arg(arguments, H5_index_t); + H5_iter_order_t order = HDva_arg(arguments, H5_iter_order_t); + H5O_iterate_t op = HDva_arg(arguments, H5O_iterate_t); + void *op_data = HDva_arg(arguments, void *); + unsigned fields = HDva_arg(arguments, unsigned); /* Call internal object visitation routine */ if(loc_params->type == H5VL_OBJECT_BY_SELF) { @@ -3217,7 +3247,7 @@ H5VL__native_object_specific(void *obj, const H5VL_loc_params_t *loc_params, H5V case H5VL_OBJECT_FLUSH: { - hid_t oid = va_arg(arguments, hid_t); + hid_t oid = HDva_arg(arguments, hid_t); /* Flush the object's metadata */ if(H5O_flush(loc.oloc, oid) < 0) @@ -3228,7 +3258,7 @@ H5VL__native_object_specific(void *obj, const H5VL_loc_params_t *loc_params, H5V case H5VL_OBJECT_REFRESH: { - hid_t oid = va_arg(arguments, hid_t); + hid_t oid = HDva_arg(arguments, hid_t); H5O_loc_t *oloc = loc.oloc; /* Refresh the metadata */ @@ -3240,10 +3270,10 @@ H5VL__native_object_specific(void *obj, const H5VL_loc_params_t *loc_params, H5V case H5VL_REF_CREATE: { - void *ref = va_arg(arguments, void *); - const char *name = va_arg(arguments, char *); - H5R_type_t ref_type = va_arg(arguments, H5R_type_t); - hid_t space_id = va_arg(arguments, hid_t); + void *ref = HDva_arg(arguments, void *); + const char *name = HDva_arg(arguments, char *); + H5R_type_t ref_type = HDva_arg(arguments, H5R_type_t); + hid_t space_id = HDva_arg(arguments, hid_t); H5S_t *space = NULL; /* Pointer to dataspace containing region */ if(space_id != (-1) && (NULL == (space = (H5S_t *)H5I_object_verify(space_id, H5I_DATASPACE)))) @@ -3282,8 +3312,8 @@ static herr_t H5VL__native_object_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR_UNUSED **req, va_list arguments) { - H5VL_object_optional_t optional_type = va_arg(arguments, H5VL_object_optional_t); - H5VL_loc_params_t *loc_params = va_arg(arguments, H5VL_loc_params_t *); + H5VL_native_object_optional_t optional_type = HDva_arg(arguments, H5VL_native_object_optional_t); + H5VL_loc_params_t *loc_params = HDva_arg(arguments, H5VL_loc_params_t *); H5G_loc_t loc; /* Location of group */ herr_t ret_value = SUCCEED; /* Return value */ @@ -3294,10 +3324,10 @@ H5VL__native_object_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, switch(optional_type) { /* H5Oget_info / H5Oget_info_by_name / H5Oget_info_by_idx */ - case H5VL_OBJECT_GET_INFO: + case H5VL_NATIVE_OBJECT_GET_INFO: { - H5O_info_t *obj_info = va_arg(arguments, H5O_info_t *); - unsigned fields = va_arg(arguments, unsigned); + H5O_info_t *obj_info = HDva_arg(arguments, H5O_info_t *); + unsigned fields = HDva_arg(arguments, unsigned); if(loc_params->type == H5VL_OBJECT_BY_SELF) { /* H5Oget_info */ /* Retrieve the object's information */ @@ -3342,11 +3372,11 @@ H5VL__native_object_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, } /* H5Oget_comment / H5Oget_comment_by_name */ - case H5VL_OBJECT_GET_COMMENT: + case H5VL_NATIVE_OBJECT_GET_COMMENT: { - char *comment = va_arg(arguments, char *); - size_t bufsize = va_arg(arguments, size_t); - ssize_t *ret = va_arg(arguments, ssize_t *); + char *comment = HDva_arg(arguments, char *); + size_t bufsize = HDva_arg(arguments, size_t); + ssize_t *ret = HDva_arg(arguments, ssize_t *); /* Retrieve the object's comment */ if(loc_params->type == H5VL_OBJECT_BY_SELF) { /* H5Oget_comment */ @@ -3363,9 +3393,9 @@ H5VL__native_object_optional(void *obj, hid_t H5_ATTR_UNUSED dxpl_id, } /* H5Oset_comment */ - case H5VL_OBJECT_SET_COMMENT: + case H5VL_NATIVE_OBJECT_SET_COMMENT: { - const char *comment = va_arg(arguments, char *); + const char *comment = HDva_arg(arguments, char *); if(loc_params->type == H5VL_OBJECT_BY_SELF) { /* H5Oset_comment */ /* (Re)set the object's comment */ @@ -3526,9 +3556,9 @@ H5VL__native_datatype_get(void *obj, H5VL_datatype_get_t get_type, switch (get_type) { case H5VL_DATATYPE_GET_BINARY: { - ssize_t *nalloc = va_arg(arguments, ssize_t *); - void *buf = va_arg(arguments, void *); - size_t size = va_arg(arguments, size_t); + ssize_t *nalloc = HDva_arg(arguments, ssize_t *); + void *buf = HDva_arg(arguments, void *); + size_t size = HDva_arg(arguments, size_t); if(H5T_encode(dt, (unsigned char *)buf, &size) < 0) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "can't determine serialized length of datatype") @@ -3540,7 +3570,7 @@ H5VL__native_datatype_get(void *obj, H5VL_datatype_get_t get_type, /* H5Tget_create_plist */ case H5VL_DATATYPE_GET_TCPL: { - hid_t *ret_id = va_arg(arguments, hid_t *); + hid_t *ret_id = HDva_arg(arguments, hid_t *); if(H5I_INVALID_HID == (*ret_id = H5T__get_create_plist(dt))) HGOTO_ERROR(H5E_DATATYPE, H5E_CANTGET, FAIL, "can't get object creation info"); @@ -3578,7 +3608,7 @@ H5VL__native_datatype_specific(void *obj, H5VL_datatype_specific_t specific_type switch(specific_type) { case H5VL_DATATYPE_FLUSH: { - hid_t type_id = va_arg(arguments, hid_t); + hid_t type_id = HDva_arg(arguments, hid_t); /* To flush metadata and invoke flush callback if there is */ if (H5O_flush_common(&dt->oloc, type_id) < 0) @@ -3589,7 +3619,7 @@ H5VL__native_datatype_specific(void *obj, H5VL_datatype_specific_t specific_type case H5VL_DATATYPE_REFRESH: { - hid_t type_id = va_arg(arguments, hid_t); + hid_t type_id = HDva_arg(arguments, hid_t); /* Call private function to refresh datatype object */ if ((H5O_refresh_metadata(type_id, dt->oloc)) < 0) diff --git a/src/H5VLpassthru.c b/src/H5VLpassthru.c index a93ac9a..49102d7 100644 --- a/src/H5VLpassthru.c +++ b/src/H5VLpassthru.c @@ -11,14 +11,14 @@ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* - * Purpose: This is a "pass through" VOL connector, which forwards each - * VOL callback to an underlying connector. - * - * It is designed as an example VOL connector for developers to - * use when creating new connectors, especially connectors that - * are outside of the HDF5 library. As such, it should _NOT_ - * include _any_ private HDF5 header files. This connector should - * therefore only make public HDF5 API calls and use standard C / + * Purpose: This is a "pass through" VOL connector, which forwards each + * VOL callback to an underlying connector. + * + * It is designed as an example VOL connector for developers to + * use when creating new connectors, especially connectors that + * are outside of the HDF5 library. As such, it should _NOT_ + * include _any_ private HDF5 header files. This connector should + * therefore only make public HDF5 API calls and use standard C / * POSIX calls. */ @@ -39,8 +39,14 @@ /* Whether to display log messge when callback is invoked */ /* (Uncomment to enable) */ -/* #define ENABLE_LOGGING */ +/* #define ENABLE_PASSTHRU_LOGGING */ +/* Hack for missing va_copy() in old Visual Studio editions + * (from H5win2_defs.h - used on VS2012 and earlier) + */ +#if defined(_WIN32) && defined(_MSC_VER) && (_MSC_VER < 1800) +#define va_copy(D,S) ((D) = (S)) +#endif /************/ /* Typedefs */ @@ -161,7 +167,7 @@ static herr_t H5VL_pass_through_request_free(void *req); static const H5VL_class_t H5VL_pass_through_g = { H5VL_PASSTHRU_VERSION, /* version */ (H5VL_class_value_t)H5VL_PASSTHRU_VALUE, /* value */ - H5VL_PASSTHRU_NAME, /* name */ + H5VL_PASSTHRU_NAME, /* name */ 0, /* capability flags */ H5VL_pass_through_init, /* initialize */ H5VL_pass_through_term, /* terminate */ @@ -252,10 +258,10 @@ static hid_t H5VL_PASSTHRU_g = H5I_INVALID_HID; /*------------------------------------------------------------------------- * Function: H5VL__pass_through_new_obj * - * Purpose: Create a new pass through object for an underlying object + * Purpose: Create a new pass through object for an underlying object * - * Return: Success: Pointer to the new pass through object - * Failure: NULL + * Return: Success: Pointer to the new pass through object + * Failure: NULL * * Programmer: Quincey Koziol * Monday, December 3, 2018 @@ -272,17 +278,17 @@ H5VL_pass_through_new_obj(void *under_obj, hid_t under_vol_id) new_obj->under_vol_id = under_vol_id; H5Iinc_ref(new_obj->under_vol_id); - return(new_obj); + return new_obj; } /* end H5VL__pass_through_new_obj() */ /*------------------------------------------------------------------------- * Function: H5VL__pass_through_free_obj * - * Purpose: Release a pass through object + * Purpose: Release a pass through object * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * * Programmer: Quincey Koziol * Monday, December 3, 2018 @@ -295,18 +301,18 @@ H5VL_pass_through_free_obj(H5VL_pass_through_t *obj) H5Idec_ref(obj->under_vol_id); free(obj); - return(0); + return 0; } /* end H5VL__pass_through_free_obj() */ /*------------------------------------------------------------------------- * Function: H5VL_pass_through_register * - * Purpose: Register the pass-through VOL connector and retrieve an ID - * for it. + * Purpose: Register the pass-through VOL connector and retrieve an ID + * for it. * - * Return: Success: The ID for the pass-through VOL connector - * Failure: -1 + * Return: Success: The ID for the pass-through VOL connector + * Failure: -1 * * Programmer: Quincey Koziol * Wednesday, November 28, 2018 @@ -323,7 +329,7 @@ H5VL_pass_through_register(void) if(H5I_VOL != H5Iget_type(H5VL_PASSTHRU_g)) H5VL_PASSTHRU_g = H5VLregister_connector(&H5VL_pass_through_g, H5P_DEFAULT); - return(H5VL_PASSTHRU_g); + return H5VL_PASSTHRU_g; } /* end H5VL_pass_through_register() */ @@ -331,25 +337,25 @@ H5VL_pass_through_register(void) * Function: H5VL_pass_through_init * * Purpose: Initialize this VOL connector, performing any necessary - * operations for the connector that will apply to all containers + * operations for the connector that will apply to all containers * accessed with the connector. * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ static herr_t H5VL_pass_through_init(hid_t vipl_id) { -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL INIT\n"); #endif /* Shut compiler up about unused parameter */ vipl_id = vipl_id; - return(0); + return 0; } /* end H5VL_pass_through_init() */ @@ -357,26 +363,26 @@ H5VL_pass_through_init(hid_t vipl_id) * Function: H5VL_pass_through_term * * Purpose: Terminate this VOL connector, performing any necessary - * operations for the connector that release connector-wide - * resources (usually created / initialized with the 'init' - * callback). + * operations for the connector that release connector-wide + * resources (usually created / initialized with the 'init' + * callback). * - * Return: Success: 0 - * Failure: (Can't fail) + * Return: Success: 0 + * Failure: (Can't fail) * *--------------------------------------------------------------------------- */ static herr_t H5VL_pass_through_term(void) { -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL TERM\n"); #endif /* Reset VOL ID */ H5VL_PASSTHRU_g = H5I_INVALID_HID; - return(0); + return 0; } /* end H5VL_pass_through_term() */ @@ -385,8 +391,8 @@ H5VL_pass_through_term(void) * * Purpose: Duplicate the connector's info object. * - * Returns: Success: New connector info object - * Failure: NULL + * Returns: Success: New connector info object + * Failure: NULL * *--------------------------------------------------------------------------- */ @@ -396,7 +402,7 @@ H5VL_pass_through_info_copy(const void *_info) const H5VL_pass_through_info_t *info = (const H5VL_pass_through_info_t *)_info; H5VL_pass_through_info_t *new_info; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL INFO Copy\n"); #endif @@ -409,7 +415,7 @@ H5VL_pass_through_info_copy(const void *_info) if(info->under_vol_info) H5VLcopy_connector_info(new_info->under_vol_id, &(new_info->under_vol_info), info->under_vol_info); - return(new_info); + return new_info; } /* end H5VL_pass_through_info_copy() */ @@ -417,10 +423,10 @@ H5VL_pass_through_info_copy(const void *_info) * Function: H5VL_pass_through_info_cmp * * Purpose: Compare two of the connector's info objects, setting *cmp_value, - * following the same rules as strcmp(). + * following the same rules as strcmp(). * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *--------------------------------------------------------------------------- */ @@ -430,7 +436,7 @@ H5VL_pass_through_info_cmp(int *cmp_value, const void *_info1, const void *_info const H5VL_pass_through_info_t *info1 = (const H5VL_pass_through_info_t *)_info1; const H5VL_pass_through_info_t *info2 = (const H5VL_pass_through_info_t *)_info2; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL INFO Compare\n"); #endif @@ -444,14 +450,14 @@ H5VL_pass_through_info_cmp(int *cmp_value, const void *_info1, const void *_info /* Compare under VOL connector classes */ H5VLcmp_connector_cls(cmp_value, info1->under_vol_id, info2->under_vol_id); if(*cmp_value != 0) - return(0); + return 0; /* Compare under VOL connector info objects */ H5VLcmp_connector_info(cmp_value, info1->under_vol_id, info1->under_vol_info, info2->under_vol_info); if(*cmp_value != 0) - return(0); + return 0; - return(0); + return 0; } /* end H5VL_pass_through_info_cmp() */ @@ -460,8 +466,8 @@ H5VL_pass_through_info_cmp(int *cmp_value, const void *_info1, const void *_info * * Purpose: Release an info object for the connector. * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *--------------------------------------------------------------------------- */ @@ -470,7 +476,7 @@ H5VL_pass_through_info_free(void *_info) { H5VL_pass_through_info_t *info = (H5VL_pass_through_info_t *)_info; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL INFO Free\n"); #endif @@ -482,7 +488,7 @@ H5VL_pass_through_info_free(void *_info) /* Free pass through info object itself */ free(info); - return(0); + return 0; } /* end H5VL_pass_through_info_free() */ @@ -491,8 +497,8 @@ H5VL_pass_through_info_free(void *_info) * * Purpose: Serialize an info object for this connector into a string * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *--------------------------------------------------------------------------- */ @@ -504,7 +510,7 @@ H5VL_pass_through_info_to_str(const void *_info, char **str) char *under_vol_string = NULL; size_t under_vol_str_len = 0; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL INFO To String\n"); #endif @@ -520,10 +526,14 @@ H5VL_pass_through_info_to_str(const void *_info, char **str) *str = (char *)H5allocate_memory(32 + under_vol_str_len, (hbool_t)0); assert(*str); - /* Encode our info */ - snprintf(*str, 32 + under_vol_str_len, "under_vol=%u;under_info={%s}", (unsigned)under_value, (under_vol_string ? under_vol_string : "")); + /* Encode our info + * Normally we'd use snprintf() here for a little extra safety, but that + * call had problems on Windows until recently. So, to be as platform-independent + * as we can, we're using sprintf() instead. + */ + sprintf(*str, "under_vol=%u;under_info={%s}", (unsigned)under_value, (under_vol_string ? under_vol_string : "")); - return(0); + return 0; } /* end H5VL_pass_through_info_to_str() */ @@ -532,8 +542,8 @@ H5VL_pass_through_info_to_str(const void *_info, char **str) * * Purpose: Deserialize a string into an info object for this connector. * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *--------------------------------------------------------------------------- */ @@ -546,7 +556,7 @@ H5VL_pass_through_str_to_info(const char *str, void **_info) hid_t under_vol_id; void *under_vol_info = NULL; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL INFO String To Info\n"); #endif @@ -576,7 +586,7 @@ H5VL_pass_through_str_to_info(const char *str, void **_info) /* Set return value */ *_info = info; - return(0); + return 0; } /* end H5VL_pass_through_str_to_info() */ @@ -585,8 +595,8 @@ H5VL_pass_through_str_to_info(const char *str, void **_info) * * Purpose: Retrieve the 'data' for a VOL object. * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *--------------------------------------------------------------------------- */ @@ -595,11 +605,11 @@ H5VL_pass_through_get_object(const void *obj) { const H5VL_pass_through_t *o = (const H5VL_pass_through_t *)obj; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL Get object\n"); #endif - return(H5VLget_object(o->under_object, o->under_vol_id)); + return H5VLget_object(o->under_object, o->under_vol_id); } /* end H5VL_pass_through_get_object() */ @@ -608,8 +618,8 @@ H5VL_pass_through_get_object(const void *obj) * * Purpose: Retrieve a "wrapper context" for an object * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *--------------------------------------------------------------------------- */ @@ -619,7 +629,7 @@ H5VL_pass_through_get_wrap_ctx(const void *obj, void **wrap_ctx) const H5VL_pass_through_t *o = (const H5VL_pass_through_t *)obj; H5VL_pass_through_wrap_ctx_t *new_wrap_ctx; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL WRAP CTX Get\n"); #endif @@ -634,7 +644,7 @@ H5VL_pass_through_get_wrap_ctx(const void *obj, void **wrap_ctx) /* Set wrap context to return */ *wrap_ctx = new_wrap_ctx; - return(0); + return 0; } /* end H5VL_pass_through_get_wrap_ctx() */ @@ -643,8 +653,8 @@ H5VL_pass_through_get_wrap_ctx(const void *obj, void **wrap_ctx) * * Purpose: Use a "wrapper context" to wrap a data object * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *--------------------------------------------------------------------------- */ @@ -655,7 +665,7 @@ H5VL_pass_through_wrap_object(void *obj, void *_wrap_ctx) H5VL_pass_through_t *new_obj; void *under; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL WRAP Object\n"); #endif @@ -666,7 +676,7 @@ H5VL_pass_through_wrap_object(void *obj, void *_wrap_ctx) else new_obj = NULL; - return(new_obj); + return new_obj; } /* end H5VL_pass_through_wrap_object() */ @@ -675,8 +685,8 @@ H5VL_pass_through_wrap_object(void *obj, void *_wrap_ctx) * * Purpose: Release a "wrapper context" for an object * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *--------------------------------------------------------------------------- */ @@ -685,7 +695,7 @@ H5VL_pass_through_free_wrap_ctx(void *_wrap_ctx) { H5VL_pass_through_wrap_ctx_t *wrap_ctx = (H5VL_pass_through_wrap_ctx_t *)_wrap_ctx; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL WRAP CTX Free\n"); #endif @@ -697,17 +707,17 @@ H5VL_pass_through_free_wrap_ctx(void *_wrap_ctx) /* Free pass through wrap context object itself */ free(wrap_ctx); - return(0); + return 0; } /* end H5VL_pass_through_free_wrap_ctx() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_attr_create + * Function: H5VL_pass_through_attr_create * - * Purpose: Creates an attribute on an object. + * Purpose: Creates an attribute on an object. * - * Return: Success: Pointer to attribute object - * Failure: NULL + * Return: Success: Pointer to attribute object + * Failure: NULL * *------------------------------------------------------------------------- */ @@ -719,7 +729,7 @@ H5VL_pass_through_attr_create(void *obj, const H5VL_loc_params_t *loc_params, H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; void *under; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL ATTRIBUTE Create\n"); #endif @@ -734,17 +744,17 @@ H5VL_pass_through_attr_create(void *obj, const H5VL_loc_params_t *loc_params, else attr = NULL; - return((void*)attr); + return (void*)attr; } /* end H5VL_pass_through_attr_create() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_attr_open + * Function: H5VL_pass_through_attr_open * - * Purpose: Opens an attribute on an object. + * Purpose: Opens an attribute on an object. * - * Return: Success: Pointer to attribute object - * Failure: NULL + * Return: Success: Pointer to attribute object + * Failure: NULL * *------------------------------------------------------------------------- */ @@ -756,7 +766,7 @@ H5VL_pass_through_attr_open(void *obj, const H5VL_loc_params_t *loc_params, H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; void *under; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL ATTRIBUTE Open\n"); #endif @@ -771,17 +781,17 @@ H5VL_pass_through_attr_open(void *obj, const H5VL_loc_params_t *loc_params, else attr = NULL; - return((void *)attr); + return (void *)attr; } /* end H5VL_pass_through_attr_open() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_attr_read + * Function: H5VL_pass_through_attr_read * - * Purpose: Reads data from attribute. + * Purpose: Reads data from attribute. * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -792,7 +802,7 @@ H5VL_pass_through_attr_read(void *attr, hid_t mem_type_id, void *buf, H5VL_pass_through_t *o = (H5VL_pass_through_t *)attr; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL ATTRIBUTE Read\n"); #endif @@ -802,17 +812,17 @@ H5VL_pass_through_attr_read(void *attr, hid_t mem_type_id, void *buf, if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_attr_read() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_attr_write + * Function: H5VL_pass_through_attr_write * - * Purpose: Writes data to attribute. + * Purpose: Writes data to attribute. * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -823,7 +833,7 @@ H5VL_pass_through_attr_write(void *attr, hid_t mem_type_id, const void *buf, H5VL_pass_through_t *o = (H5VL_pass_through_t *)attr; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL ATTRIBUTE Write\n"); #endif @@ -833,17 +843,17 @@ H5VL_pass_through_attr_write(void *attr, hid_t mem_type_id, const void *buf, if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_attr_write() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_attr_get + * Function: H5VL_pass_through_attr_get * - * Purpose: Gets information about an attribute + * Purpose: Gets information about an attribute * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -854,7 +864,7 @@ H5VL_pass_through_attr_get(void *obj, H5VL_attr_get_t get_type, hid_t dxpl_id, H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL ATTRIBUTE Get\n"); #endif @@ -864,17 +874,17 @@ H5VL_pass_through_attr_get(void *obj, H5VL_attr_get_t get_type, hid_t dxpl_id, if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_attr_get() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_attr_specific + * Function: H5VL_pass_through_attr_specific * - * Purpose: Specific operation on attribute + * Purpose: Specific operation on attribute * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -885,7 +895,7 @@ H5VL_pass_through_attr_specific(void *obj, const H5VL_loc_params_t *loc_params, H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL ATTRIBUTE Specific\n"); #endif @@ -895,7 +905,7 @@ H5VL_pass_through_attr_specific(void *obj, const H5VL_loc_params_t *loc_params, if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_attr_specific() */ @@ -904,8 +914,8 @@ H5VL_pass_through_attr_specific(void *obj, const H5VL_loc_params_t *loc_params, * * Purpose: Perform a connector-specific operation on an attribute * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -916,7 +926,7 @@ H5VL_pass_through_attr_optional(void *obj, hid_t dxpl_id, void **req, H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL ATTRIBUTE Optional\n"); #endif @@ -926,17 +936,17 @@ H5VL_pass_through_attr_optional(void *obj, hid_t dxpl_id, void **req, if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_attr_optional() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_attr_close + * Function: H5VL_pass_through_attr_close * - * Purpose: Closes an attribute. + * Purpose: Closes an attribute. * - * Return: Success: 0 - * Failure: -1, attr not closed. + * Return: Success: 0 + * Failure: -1, attr not closed. * *------------------------------------------------------------------------- */ @@ -946,7 +956,7 @@ H5VL_pass_through_attr_close(void *attr, hid_t dxpl_id, void **req) H5VL_pass_through_t *o = (H5VL_pass_through_t *)attr; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL ATTRIBUTE Close\n"); #endif @@ -960,7 +970,7 @@ H5VL_pass_through_attr_close(void *attr, hid_t dxpl_id, void **req) if(ret_value >= 0) H5VL_pass_through_free_obj(o); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_attr_close() */ @@ -982,7 +992,7 @@ H5VL_pass_through_dataset_create(void *obj, const H5VL_loc_params_t *loc_params, H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; void *under; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL DATASET Create\n"); #endif @@ -997,7 +1007,7 @@ H5VL_pass_through_dataset_create(void *obj, const H5VL_loc_params_t *loc_params, else dset = NULL; - return((void *)dset); + return (void *)dset; } /* end H5VL_pass_through_dataset_create() */ @@ -1019,7 +1029,7 @@ H5VL_pass_through_dataset_open(void *obj, const H5VL_loc_params_t *loc_params, H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; void *under; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL DATASET Open\n"); #endif @@ -1034,7 +1044,7 @@ H5VL_pass_through_dataset_open(void *obj, const H5VL_loc_params_t *loc_params, else dset = NULL; - return((void *)dset); + return (void *)dset; } /* end H5VL_pass_through_dataset_open() */ @@ -1043,8 +1053,8 @@ H5VL_pass_through_dataset_open(void *obj, const H5VL_loc_params_t *loc_params, * * Purpose: Reads data elements from a dataset into a buffer. * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -1055,7 +1065,7 @@ H5VL_pass_through_dataset_read(void *dset, hid_t mem_type_id, hid_t mem_space_id H5VL_pass_through_t *o = (H5VL_pass_through_t *)dset; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL DATASET Read\n"); #endif @@ -1065,7 +1075,7 @@ H5VL_pass_through_dataset_read(void *dset, hid_t mem_type_id, hid_t mem_space_id if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_dataset_read() */ @@ -1074,8 +1084,8 @@ H5VL_pass_through_dataset_read(void *dset, hid_t mem_type_id, hid_t mem_space_id * * Purpose: Writes data elements from a buffer into a dataset. * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -1086,7 +1096,7 @@ H5VL_pass_through_dataset_write(void *dset, hid_t mem_type_id, hid_t mem_space_i H5VL_pass_through_t *o = (H5VL_pass_through_t *)dset; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL DATASET Write\n"); #endif @@ -1096,7 +1106,7 @@ H5VL_pass_through_dataset_write(void *dset, hid_t mem_type_id, hid_t mem_space_i if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_dataset_write() */ @@ -1105,8 +1115,8 @@ H5VL_pass_through_dataset_write(void *dset, hid_t mem_type_id, hid_t mem_space_i * * Purpose: Gets information about a dataset * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -1117,7 +1127,7 @@ H5VL_pass_through_dataset_get(void *dset, H5VL_dataset_get_t get_type, H5VL_pass_through_t *o = (H5VL_pass_through_t *)dset; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL DATASET Get\n"); #endif @@ -1127,17 +1137,17 @@ H5VL_pass_through_dataset_get(void *dset, H5VL_dataset_get_t get_type, if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_dataset_get() */ /*------------------------------------------------------------------------- * Function: H5VL_pass_through_dataset_specific * - * Purpose: Specific operation on a dataset + * Purpose: Specific operation on a dataset * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -1148,7 +1158,7 @@ H5VL_pass_through_dataset_specific(void *obj, H5VL_dataset_specific_t specific_t H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL H5Dspecific\n"); #endif @@ -1158,7 +1168,7 @@ H5VL_pass_through_dataset_specific(void *obj, H5VL_dataset_specific_t specific_t if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_dataset_specific() */ @@ -1167,8 +1177,8 @@ H5VL_pass_through_dataset_specific(void *obj, H5VL_dataset_specific_t specific_t * * Purpose: Perform a connector-specific operation on a dataset * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -1179,7 +1189,7 @@ H5VL_pass_through_dataset_optional(void *obj, hid_t dxpl_id, void **req, H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL DATASET Optional\n"); #endif @@ -1189,7 +1199,7 @@ H5VL_pass_through_dataset_optional(void *obj, hid_t dxpl_id, void **req, if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_dataset_optional() */ @@ -1198,8 +1208,8 @@ H5VL_pass_through_dataset_optional(void *obj, hid_t dxpl_id, void **req, * * Purpose: Closes a dataset. * - * Return: Success: 0 - * Failure: -1, dataset not closed. + * Return: Success: 0 + * Failure: -1, dataset not closed. * *------------------------------------------------------------------------- */ @@ -1209,7 +1219,7 @@ H5VL_pass_through_dataset_close(void *dset, hid_t dxpl_id, void **req) H5VL_pass_through_t *o = (H5VL_pass_through_t *)dset; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL DATASET Close\n"); #endif @@ -1223,17 +1233,17 @@ H5VL_pass_through_dataset_close(void *dset, hid_t dxpl_id, void **req) if(ret_value >= 0) H5VL_pass_through_free_obj(o); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_dataset_close() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_datatype_commit + * Function: H5VL_pass_through_datatype_commit * - * Purpose: Commits a datatype inside a container. + * Purpose: Commits a datatype inside a container. * - * Return: Success: Pointer to datatype object - * Failure: NULL + * Return: Success: Pointer to datatype object + * Failure: NULL * *------------------------------------------------------------------------- */ @@ -1246,7 +1256,7 @@ H5VL_pass_through_datatype_commit(void *obj, const H5VL_loc_params_t *loc_params H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; void *under; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL DATATYPE Commit\n"); #endif @@ -1261,7 +1271,7 @@ H5VL_pass_through_datatype_commit(void *obj, const H5VL_loc_params_t *loc_params else dt = NULL; - return((void *)dt); + return (void *)dt; } /* end H5VL_pass_through_datatype_commit() */ @@ -1283,7 +1293,7 @@ H5VL_pass_through_datatype_open(void *obj, const H5VL_loc_params_t *loc_params, H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; void *under; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL DATATYPE Open\n"); #endif @@ -1298,17 +1308,17 @@ H5VL_pass_through_datatype_open(void *obj, const H5VL_loc_params_t *loc_params, else dt = NULL; - return((void *)dt); + return (void *)dt; } /* end H5VL_pass_through_datatype_open() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_datatype_get + * Function: H5VL_pass_through_datatype_get * - * Purpose: Get information about a datatype + * Purpose: Get information about a datatype * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -1319,7 +1329,7 @@ H5VL_pass_through_datatype_get(void *dt, H5VL_datatype_get_t get_type, H5VL_pass_through_t *o = (H5VL_pass_through_t *)dt; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL DATATYPE Get\n"); #endif @@ -1329,7 +1339,7 @@ H5VL_pass_through_datatype_get(void *dt, H5VL_datatype_get_t get_type, if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_datatype_get() */ @@ -1338,8 +1348,8 @@ H5VL_pass_through_datatype_get(void *dt, H5VL_datatype_get_t get_type, * * Purpose: Specific operations for datatypes * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -1350,7 +1360,7 @@ H5VL_pass_through_datatype_specific(void *obj, H5VL_datatype_specific_t specific H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL DATATYPE Specific\n"); #endif @@ -1360,7 +1370,7 @@ H5VL_pass_through_datatype_specific(void *obj, H5VL_datatype_specific_t specific if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_datatype_specific() */ @@ -1369,8 +1379,8 @@ H5VL_pass_through_datatype_specific(void *obj, H5VL_datatype_specific_t specific * * Purpose: Perform a connector-specific operation on a datatype * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -1381,7 +1391,7 @@ H5VL_pass_through_datatype_optional(void *obj, hid_t dxpl_id, void **req, H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL DATATYPE Optional\n"); #endif @@ -1391,17 +1401,17 @@ H5VL_pass_through_datatype_optional(void *obj, hid_t dxpl_id, void **req, if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_datatype_optional() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_datatype_close + * Function: H5VL_pass_through_datatype_close * - * Purpose: Closes a datatype. + * Purpose: Closes a datatype. * - * Return: Success: 0 - * Failure: -1, datatype not closed. + * Return: Success: 0 + * Failure: -1, datatype not closed. * *------------------------------------------------------------------------- */ @@ -1411,7 +1421,7 @@ H5VL_pass_through_datatype_close(void *dt, hid_t dxpl_id, void **req) H5VL_pass_through_t *o = (H5VL_pass_through_t *)dt; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL DATATYPE Close\n"); #endif @@ -1427,7 +1437,7 @@ H5VL_pass_through_datatype_close(void *dt, hid_t dxpl_id, void **req) if(ret_value >= 0) H5VL_pass_through_free_obj(o); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_datatype_close() */ @@ -1450,7 +1460,7 @@ H5VL_pass_through_file_create(const char *name, unsigned flags, hid_t fcpl_id, hid_t under_fapl_id; void *under; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL FILE Create\n"); #endif @@ -1481,7 +1491,7 @@ H5VL_pass_through_file_create(const char *name, unsigned flags, hid_t fcpl_id, /* Release copy of our VOL info */ H5VL_pass_through_info_free(info); - return((void *)file); + return (void *)file; } /* end H5VL_pass_through_file_create() */ @@ -1504,7 +1514,7 @@ H5VL_pass_through_file_open(const char *name, unsigned flags, hid_t fapl_id, hid_t under_fapl_id; void *under; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL FILE Open\n"); #endif @@ -1535,7 +1545,7 @@ H5VL_pass_through_file_open(const char *name, unsigned flags, hid_t fapl_id, /* Release copy of our VOL info */ H5VL_pass_through_info_free(info); - return((void *)file); + return (void *)file; } /* end H5VL_pass_through_file_open() */ @@ -1544,8 +1554,8 @@ H5VL_pass_through_file_open(const char *name, unsigned flags, hid_t fapl_id, * * Purpose: Get info about a file * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -1556,7 +1566,7 @@ H5VL_pass_through_file_get(void *file, H5VL_file_get_t get_type, hid_t dxpl_id, H5VL_pass_through_t *o = (H5VL_pass_through_t *)file; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL FILE Get\n"); #endif @@ -1566,18 +1576,18 @@ H5VL_pass_through_file_get(void *file, H5VL_file_get_t get_type, hid_t dxpl_id, if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_file_get() */ /*------------------------------------------------------------------------- * Function: H5VL_pass_through_file_specific_reissue * - * Purpose: Re-wrap vararg arguments into a va_list and reissue the - * file specific callback to the underlying VOL connector. + * Purpose: Re-wrap vararg arguments into a va_list and reissue the + * file specific callback to the underlying VOL connector. * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -1592,17 +1602,17 @@ H5VL_pass_through_file_specific_reissue(void *obj, hid_t connector_id, ret_value = H5VLfile_specific(obj, connector_id, specific_type, dxpl_id, req, arguments); va_end(arguments); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_file_specific_reissue() */ /*------------------------------------------------------------------------- * Function: H5VL_pass_through_file_specific * - * Purpose: Specific operation on file + * Purpose: Specific operation on file * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -1614,7 +1624,7 @@ H5VL_pass_through_file_specific(void *file, H5VL_file_specific_t specific_type, hid_t under_vol_id = -1; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL FILE Specific\n"); #endif @@ -1699,7 +1709,7 @@ H5VL_pass_through_file_specific(void *file, H5VL_file_specific_t specific_type, if(req && *req) *req = H5VL_pass_through_new_obj(*req, under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_file_specific() */ @@ -1708,8 +1718,8 @@ H5VL_pass_through_file_specific(void *file, H5VL_file_specific_t specific_type, * * Purpose: Perform a connector-specific operation on a file * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -1720,7 +1730,7 @@ H5VL_pass_through_file_optional(void *file, hid_t dxpl_id, void **req, H5VL_pass_through_t *o = (H5VL_pass_through_t *)file; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL File Optional\n"); #endif @@ -1730,7 +1740,7 @@ H5VL_pass_through_file_optional(void *file, hid_t dxpl_id, void **req, if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_file_optional() */ @@ -1739,8 +1749,8 @@ H5VL_pass_through_file_optional(void *file, hid_t dxpl_id, void **req, * * Purpose: Closes a file. * - * Return: Success: 0 - * Failure: -1, file not closed. + * Return: Success: 0 + * Failure: -1, file not closed. * *------------------------------------------------------------------------- */ @@ -1750,7 +1760,7 @@ H5VL_pass_through_file_close(void *file, hid_t dxpl_id, void **req) H5VL_pass_through_t *o = (H5VL_pass_through_t *)file; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL FILE Close\n"); #endif @@ -1764,7 +1774,7 @@ H5VL_pass_through_file_close(void *file, hid_t dxpl_id, void **req) if(ret_value >= 0) H5VL_pass_through_free_obj(o); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_file_close() */ @@ -1786,7 +1796,7 @@ H5VL_pass_through_group_create(void *obj, const H5VL_loc_params_t *loc_params, H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; void *under; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL GROUP Create\n"); #endif @@ -1801,7 +1811,7 @@ H5VL_pass_through_group_create(void *obj, const H5VL_loc_params_t *loc_params, else group = NULL; - return((void *)group); + return (void *)group; } /* end H5VL_pass_through_group_create() */ @@ -1823,7 +1833,7 @@ H5VL_pass_through_group_open(void *obj, const H5VL_loc_params_t *loc_params, H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; void *under; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL GROUP Open\n"); #endif @@ -1838,7 +1848,7 @@ H5VL_pass_through_group_open(void *obj, const H5VL_loc_params_t *loc_params, else group = NULL; - return((void *)group); + return (void *)group; } /* end H5VL_pass_through_group_open() */ @@ -1847,8 +1857,8 @@ H5VL_pass_through_group_open(void *obj, const H5VL_loc_params_t *loc_params, * * Purpose: Get info about a group * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -1859,7 +1869,7 @@ H5VL_pass_through_group_get(void *obj, H5VL_group_get_t get_type, hid_t dxpl_id, H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL GROUP Get\n"); #endif @@ -1869,17 +1879,17 @@ H5VL_pass_through_group_get(void *obj, H5VL_group_get_t get_type, hid_t dxpl_id, if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_group_get() */ /*------------------------------------------------------------------------- * Function: H5VL_pass_through_group_specific * - * Purpose: Specific operation on a group + * Purpose: Specific operation on a group * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -1890,7 +1900,7 @@ H5VL_pass_through_group_specific(void *obj, H5VL_group_specific_t specific_type, H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL GROUP Specific\n"); #endif @@ -1900,7 +1910,7 @@ H5VL_pass_through_group_specific(void *obj, H5VL_group_specific_t specific_type, if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_group_specific() */ @@ -1909,8 +1919,8 @@ H5VL_pass_through_group_specific(void *obj, H5VL_group_specific_t specific_type, * * Purpose: Perform a connector-specific operation on a group * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -1921,7 +1931,7 @@ H5VL_pass_through_group_optional(void *obj, hid_t dxpl_id, void **req, H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL GROUP Optional\n"); #endif @@ -1931,7 +1941,7 @@ H5VL_pass_through_group_optional(void *obj, hid_t dxpl_id, void **req, if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_group_optional() */ @@ -1940,8 +1950,8 @@ H5VL_pass_through_group_optional(void *obj, hid_t dxpl_id, void **req, * * Purpose: Closes a group. * - * Return: Success: 0 - * Failure: -1, group not closed. + * Return: Success: 0 + * Failure: -1, group not closed. * *------------------------------------------------------------------------- */ @@ -1951,7 +1961,7 @@ H5VL_pass_through_group_close(void *grp, hid_t dxpl_id, void **req) H5VL_pass_through_t *o = (H5VL_pass_through_t *)grp; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL H5Gclose\n"); #endif @@ -1965,17 +1975,17 @@ H5VL_pass_through_group_close(void *grp, hid_t dxpl_id, void **req) if(ret_value >= 0) H5VL_pass_through_free_obj(o); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_group_close() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_link_create + * Function: H5VL_pass_through_link_create * - * Purpose: Creates a hard / soft / UD / external link. + * Purpose: Creates a hard / soft / UD / external link. * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -1986,7 +1996,7 @@ H5VL_pass_through_link_create(H5VL_link_create_type_t create_type, void *obj, co hid_t under_vol_id = -1; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL LINK Create\n"); #endif @@ -2018,22 +2028,22 @@ H5VL_pass_through_link_create(H5VL_link_create_type_t create_type, void *obj, co if(req && *req) *req = H5VL_pass_through_new_obj(*req, under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_link_create() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_link_copy + * Function: H5VL_pass_through_link_copy * - * Purpose: Renames an object within an HDF5 container and copies it to a new + * Purpose: Renames an object within an HDF5 container and copies it to a new * group. The original name SRC is unlinked from the group graph * and then inserted with the new name DST (which can specify a * new path for the object) as an atomic operation. The names * are interpreted relative to SRC_LOC_ID and * DST_LOC_ID, which are either file IDs or group ID. * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -2047,7 +2057,7 @@ H5VL_pass_through_link_copy(void *src_obj, const H5VL_loc_params_t *loc_params1, hid_t under_vol_id = -1; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL LINK Copy\n"); #endif @@ -2064,23 +2074,22 @@ H5VL_pass_through_link_copy(void *src_obj, const H5VL_loc_params_t *loc_params1, if(req && *req) *req = H5VL_pass_through_new_obj(*req, under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_link_copy() */ /*------------------------------------------------------------------------- - * Function: -H5VL_pass_through_link_move(void *src_obj, const H5VL_loc_params_t *loc_params1, + * Function: H5VL_pass_through_link_move * - * Purpose: Moves a link within an HDF5 file to a new group. The original - * name SRC is unlinked from the group graph + * Purpose: Moves a link within an HDF5 file to a new group. The original + * name SRC is unlinked from the group graph * and then inserted with the new name DST (which can specify a * new path for the object) as an atomic operation. The names * are interpreted relative to SRC_LOC_ID and * DST_LOC_ID, which are either file IDs or group ID. * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -2094,7 +2103,7 @@ H5VL_pass_through_link_move(void *src_obj, const H5VL_loc_params_t *loc_params1, hid_t under_vol_id = -1; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL LINK Move\n"); #endif @@ -2111,17 +2120,17 @@ H5VL_pass_through_link_move(void *src_obj, const H5VL_loc_params_t *loc_params1, if(req && *req) *req = H5VL_pass_through_new_obj(*req, under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_link_move() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_link_get + * Function: H5VL_pass_through_link_get * - * Purpose: Get info about a link + * Purpose: Get info about a link * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -2132,7 +2141,7 @@ H5VL_pass_through_link_get(void *obj, const H5VL_loc_params_t *loc_params, H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL LINK Get\n"); #endif @@ -2142,17 +2151,17 @@ H5VL_pass_through_link_get(void *obj, const H5VL_loc_params_t *loc_params, if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_link_get() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_link_specific + * Function: H5VL_pass_through_link_specific * - * Purpose: Specific operation on a link + * Purpose: Specific operation on a link * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -2163,7 +2172,7 @@ H5VL_pass_through_link_specific(void *obj, const H5VL_loc_params_t *loc_params, H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL LINK Specific\n"); #endif @@ -2173,7 +2182,7 @@ H5VL_pass_through_link_specific(void *obj, const H5VL_loc_params_t *loc_params, if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_link_specific() */ @@ -2182,8 +2191,8 @@ H5VL_pass_through_link_specific(void *obj, const H5VL_loc_params_t *loc_params, * * Purpose: Perform a connector-specific operation on a link * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -2194,7 +2203,7 @@ H5VL_pass_through_link_optional(void *obj, hid_t dxpl_id, void **req, H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL LINK Optional\n"); #endif @@ -2204,17 +2213,17 @@ H5VL_pass_through_link_optional(void *obj, hid_t dxpl_id, void **req, if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_link_optional() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_object_open + * Function: H5VL_pass_through_object_open * - * Purpose: Opens an object inside a container. + * Purpose: Opens an object inside a container. * - * Return: Success: Pointer to object - * Failure: NULL + * Return: Success: Pointer to object + * Failure: NULL * *------------------------------------------------------------------------- */ @@ -2226,7 +2235,7 @@ H5VL_pass_through_object_open(void *obj, const H5VL_loc_params_t *loc_params, H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; void *under; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL OBJECT Open\n"); #endif @@ -2241,17 +2250,17 @@ H5VL_pass_through_object_open(void *obj, const H5VL_loc_params_t *loc_params, else new_obj = NULL; - return((void *)new_obj); + return (void *)new_obj; } /* end H5VL_pass_through_object_open() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_object_copy + * Function: H5VL_pass_through_object_copy * - * Purpose: Copies an object inside a container. + * Purpose: Copies an object inside a container. * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -2265,7 +2274,7 @@ H5VL_pass_through_object_copy(void *src_obj, const H5VL_loc_params_t *src_loc_pa H5VL_pass_through_t *o_dst = (H5VL_pass_through_t *)dst_obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL OBJECT Copy\n"); #endif @@ -2275,17 +2284,17 @@ H5VL_pass_through_object_copy(void *src_obj, const H5VL_loc_params_t *src_loc_pa if(req && *req) *req = H5VL_pass_through_new_obj(*req, o_src->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_object_copy() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_object_get + * Function: H5VL_pass_through_object_get * - * Purpose: Get info about an object + * Purpose: Get info about an object * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -2295,7 +2304,7 @@ H5VL_pass_through_object_get(void *obj, const H5VL_loc_params_t *loc_params, H5V H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL OBJECT Get\n"); #endif @@ -2305,17 +2314,17 @@ H5VL_pass_through_object_get(void *obj, const H5VL_loc_params_t *loc_params, H5V if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_object_get() */ /*------------------------------------------------------------------------- * Function: H5VL_pass_through_object_specific * - * Purpose: Specific operation on an object + * Purpose: Specific operation on an object * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -2327,7 +2336,7 @@ H5VL_pass_through_object_specific(void *obj, const H5VL_loc_params_t *loc_params H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL OBJECT Specific\n"); #endif @@ -2337,17 +2346,17 @@ H5VL_pass_through_object_specific(void *obj, const H5VL_loc_params_t *loc_params if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_object_specific() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_object_optional + * Function: H5VL_pass_through_object_optional * - * Purpose: Perform a connector-specific operation for an object + * Purpose: Perform a connector-specific operation for an object * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -2358,7 +2367,7 @@ H5VL_pass_through_object_optional(void *obj, hid_t dxpl_id, void **req, H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL OBJECT Optional\n"); #endif @@ -2368,20 +2377,20 @@ H5VL_pass_through_object_optional(void *obj, hid_t dxpl_id, void **req, if(req && *req) *req = H5VL_pass_through_new_obj(*req, o->under_vol_id); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_object_optional() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_request_wait + * Function: H5VL_pass_through_request_wait * - * Purpose: Wait (with a timeout) for an async operation to complete + * Purpose: Wait (with a timeout) for an async operation to complete * - * Note: Releases the request if the operation has completed and the - * connector callback succeeds + * Note: Releases the request if the operation has completed and the + * connector callback succeeds * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -2392,7 +2401,7 @@ H5VL_pass_through_request_wait(void *obj, uint64_t timeout, H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL REQUEST Wait\n"); #endif @@ -2401,20 +2410,20 @@ H5VL_pass_through_request_wait(void *obj, uint64_t timeout, if(ret_value >= 0 && *status != H5ES_STATUS_IN_PROGRESS) H5VL_pass_through_free_obj(o); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_request_wait() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_request_notify + * Function: H5VL_pass_through_request_notify * * Purpose: Registers a user callback to be invoked when an asynchronous - * operation completes + * operation completes * - * Note: Releases the request, if connector callback succeeds + * Note: Releases the request, if connector callback succeeds * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -2424,7 +2433,7 @@ H5VL_pass_through_request_notify(void *obj, H5VL_request_notify_t cb, void *ctx) H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL REQUEST Wait\n"); #endif @@ -2433,19 +2442,19 @@ H5VL_pass_through_request_notify(void *obj, H5VL_request_notify_t cb, void *ctx) if(ret_value >= 0) H5VL_pass_through_free_obj(o); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_request_notify() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_request_cancel + * Function: H5VL_pass_through_request_cancel * * Purpose: Cancels an asynchronous operation * - * Note: Releases the request, if connector callback succeeds + * Note: Releases the request, if connector callback succeeds * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -2455,7 +2464,7 @@ H5VL_pass_through_request_cancel(void *obj) H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL REQUEST Cancel\n"); #endif @@ -2464,18 +2473,18 @@ H5VL_pass_through_request_cancel(void *obj) if(ret_value >= 0) H5VL_pass_through_free_obj(o); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_request_cancel() */ /*------------------------------------------------------------------------- * Function: H5VL_pass_through_request_specific_reissue * - * Purpose: Re-wrap vararg arguments into a va_list and reissue the - * request specific callback to the underlying VOL connector. + * Purpose: Re-wrap vararg arguments into a va_list and reissue the + * request specific callback to the underlying VOL connector. * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -2490,17 +2499,17 @@ H5VL_pass_through_request_specific_reissue(void *obj, hid_t connector_id, ret_value = H5VLrequest_specific(obj, connector_id, specific_type, arguments); va_end(arguments); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_request_specific_reissue() */ /*------------------------------------------------------------------------- * Function: H5VL_pass_through_request_specific * - * Purpose: Specific operation on a request + * Purpose: Specific operation on a request * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -2510,7 +2519,7 @@ H5VL_pass_through_request_specific(void *obj, H5VL_request_specific_t specific_t { herr_t ret_value = -1; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL REQUEST Specific\n"); #endif @@ -2632,17 +2641,17 @@ H5VL_pass_through_request_specific(void *obj, H5VL_request_specific_t specific_t else assert(0 && "Unknown 'specific' operation"); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_request_specific() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_request_optional + * Function: H5VL_pass_through_request_optional * - * Purpose: Perform a connector-specific operation for a request + * Purpose: Perform a connector-specific operation for a request * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -2652,24 +2661,24 @@ H5VL_pass_through_request_optional(void *obj, va_list arguments) H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL REQUEST Optional\n"); #endif ret_value = H5VLrequest_optional(o->under_object, o->under_vol_id, arguments); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_request_optional() */ /*------------------------------------------------------------------------- - * Function: H5VL_pass_through_request_free + * Function: H5VL_pass_through_request_free * * Purpose: Releases a request, allowing the operation to complete without - * application tracking + * application tracking * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * *------------------------------------------------------------------------- */ @@ -2679,7 +2688,7 @@ H5VL_pass_through_request_free(void *obj) H5VL_pass_through_t *o = (H5VL_pass_through_t *)obj; herr_t ret_value; -#ifdef ENABLE_LOGGING +#ifdef ENABLE_PASSTHRU_LOGGING printf("------- PASS THROUGH VOL REQUEST Free\n"); #endif @@ -2688,6 +2697,6 @@ H5VL_pass_through_request_free(void *obj) if(ret_value >= 0) H5VL_pass_through_free_obj(o); - return(ret_value); + return ret_value; } /* end H5VL_pass_through_request_free() */ diff --git a/src/H5private.h b/src/H5private.h index b654bae..f58faec 100644 --- a/src/H5private.h +++ b/src/H5private.h @@ -1393,6 +1393,9 @@ typedef off_t h5_stat_size_t; #ifndef HDstrtok #define HDstrtok(X,Y) strtok(X,Y) #endif /* HDstrtok */ +#ifndef HDstrtok_r + #define HDstrtok_r(X,Y,Z) strtok_r(X,Y,Z) +#endif /* HDstrtok */ #ifndef HDstrtol #define HDstrtol(S,R,N) strtol(S,R,N) #endif /* HDstrtol */ @@ -1495,6 +1498,9 @@ typedef off_t h5_stat_size_t; #ifndef HDva_arg #define HDva_arg(A,T) va_arg(A,T) #endif /* HDva_arg */ +#ifndef HDva_copy +#define HDva_copy(D,S) va_copy(D,S) +#endif /* HDva_copy */ #ifndef HDva_end #define HDva_end(A) va_end(A) #endif /* HDva_end */ diff --git a/src/H5system.c b/src/H5system.c index 2d29650..f47d057 100644 --- a/src/H5system.c +++ b/src/H5system.c @@ -121,7 +121,7 @@ HDfprintf(FILE *stream, const char *fmt, ...) HDassert(stream); HDassert(fmt); - va_start (ap, fmt); + HDva_start (ap, fmt); while (*fmt) { fwidth = prec = 0; zerofill = 0; @@ -170,7 +170,7 @@ HDfprintf(FILE *stream, const char *fmt, ...) s = rest; } /* end if */ else if ('*'==*s) { - fwidth = va_arg(ap, int); + fwidth = HDva_arg(ap, int); if(fwidth < 0) { leftjust = 1; fwidth = -fwidth; @@ -185,7 +185,7 @@ HDfprintf(FILE *stream, const char *fmt, ...) prec = (int)HDstrtol(s, &rest, 10); s = rest; } else if('*'==*s) { - prec = va_arg(ap, int); + prec = HDva_arg(ap, int); s++; } if(prec < 1) @@ -272,16 +272,16 @@ HDfprintf(FILE *stream, const char *fmt, ...) case 'd': case 'i': if(!HDstrcmp(modifier, "h")) { - short x = (short)va_arg(ap, int); + short x = (short)HDva_arg(ap, int); n = fprintf(stream, format_templ, x); } else if(!*modifier) { - int x = va_arg(ap, int); + int x = HDva_arg(ap, int); n = fprintf(stream, format_templ, x); } else if(!HDstrcmp(modifier, "l")) { - long x = va_arg(ap, long); + long x = HDva_arg(ap, long); n = fprintf(stream, format_templ, x); } else { - int64_t x = va_arg(ap, int64_t); + int64_t x = HDva_arg(ap, int64_t); n = fprintf(stream, format_templ, x); } break; @@ -291,16 +291,16 @@ HDfprintf(FILE *stream, const char *fmt, ...) case 'x': case 'X': if(!HDstrcmp(modifier, "h")) { - unsigned short x = (unsigned short)va_arg(ap, unsigned int); + unsigned short x = (unsigned short)HDva_arg(ap, unsigned int); n = fprintf(stream, format_templ, x); } else if(!*modifier) { - unsigned int x = va_arg(ap, unsigned int); + unsigned int x = HDva_arg(ap, unsigned int); n = fprintf(stream, format_templ, x); } else if(!HDstrcmp(modifier, "l")) { - unsigned long x = va_arg(ap, unsigned long); + unsigned long x = HDva_arg(ap, unsigned long); n = fprintf(stream, format_templ, x); } else { - uint64_t x = va_arg(ap, uint64_t); + uint64_t x = HDva_arg(ap, uint64_t); n = fprintf(stream, format_templ, x); } break; @@ -311,10 +311,10 @@ HDfprintf(FILE *stream, const char *fmt, ...) case 'g': case 'G': if(!HDstrcmp(modifier, "h")) { - float x = (float)va_arg(ap, double); + float x = (float)HDva_arg(ap, double); n = fprintf(stream, format_templ, (double)x); } else if(!*modifier || !HDstrcmp(modifier, "l")) { - double x = va_arg(ap, double); + double x = HDva_arg(ap, double); n = fprintf(stream, format_templ, x); } else { /* @@ -322,10 +322,10 @@ HDfprintf(FILE *stream, const char *fmt, ...) * `double' are the same thing. */ #if H5_SIZEOF_LONG_DOUBLE != H5_SIZEOF_DOUBLE - long double x = va_arg(ap, long double); + long double x = HDva_arg(ap, long double); n = fprintf(stream, format_templ, x); #else - double x = va_arg(ap, double); + double x = HDva_arg(ap, double); n = fprintf(stream, format_templ, x); #endif } @@ -333,7 +333,7 @@ HDfprintf(FILE *stream, const char *fmt, ...) case 'a': { - haddr_t x = va_arg(ap, haddr_t); + haddr_t x = HDva_arg(ap, haddr_t); if(H5F_addr_defined(x)) { len = 0; @@ -379,7 +379,7 @@ HDfprintf(FILE *stream, const char *fmt, ...) case 'c': { - char x = (char)va_arg(ap, int); + char x = (char)HDva_arg(ap, int); n = fprintf(stream, format_templ, x); } break; @@ -387,7 +387,7 @@ HDfprintf(FILE *stream, const char *fmt, ...) case 's': case 'p': { - char *x = va_arg(ap, char*); + char *x = HDva_arg(ap, char*); n = fprintf(stream, format_templ, x); } break; @@ -399,7 +399,7 @@ HDfprintf(FILE *stream, const char *fmt, ...) case 't': { - htri_t tri_var = va_arg(ap, htri_t); + htri_t tri_var = HDva_arg(ap, htri_t); if(tri_var > 0) fprintf(stream, "TRUE"); @@ -423,7 +423,7 @@ HDfprintf(FILE *stream, const char *fmt, ...) nout++; } } - va_end(ap); + HDva_end(ap); return nout; } /* end HDfprintf() */ @@ -492,7 +492,8 @@ HDstrtoll(const char *s, const char **rest, int base) /* Optional minus or plus sign */ if ('+'==*s) { s++; - } else if ('-'==*s) { + } + else if ('-'==*s) { sign = -1; s++; } @@ -501,10 +502,12 @@ HDstrtoll(const char *s, const char **rest, int base) if (0==base && '0'==*s && ('x'==s[1] || 'X'==s[1])) { base = 16; s += 2; - } else if (0==base && '0'==*s) { + } + else if (0==base && '0'==*s) { base = 8; s++; - } else if (0==base) { + } + else if (0==base) { base = 10; } @@ -525,7 +528,8 @@ HDstrtoll(const char *s, const char **rest, int base) if (acc*base+digit < acc) { overflow = TRUE; - } else { + } + else { acc = acc*base + digit; } } @@ -536,7 +540,8 @@ HDstrtoll(const char *s, const char **rest, int base) if (overflow) { if (sign>0) { acc = ((uint64_t)1<<(8*sizeof(int64_t)-1))-1; - } else { + } + else { acc = (int64_t)((uint64_t)1<<(8*sizeof(int64_t)-1)); } errno = ERANGE; @@ -843,9 +848,9 @@ int c99_snprintf(char* str, size_t size, const char* format, ...) int count; va_list ap; - va_start(ap, format); + HDva_start(ap, format); count = c99_vsnprintf(str, size, format, ap); - va_end(ap); + HDva_end(ap); return count; } diff --git a/src/H5trace.c b/src/H5trace.c index f6740f4..b94245c 100644 --- a/src/H5trace.c +++ b/src/H5trace.c @@ -135,7 +135,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) if(!out) return 0.0F; /*tracing is off*/ - va_start(ap, type); + HDva_start(ap, type); if(H5_debug_g.ttop) { if(returning) { @@ -227,7 +227,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) * name is the null pointer then don't print the argument or the * following `='. This is used for return values. */ - argname = va_arg(ap, char *); + argname = HDva_arg(ap, char *); if(argname) { unsigned n = (unsigned)MAX (0, (int)HDstrlen(argname) - 3); @@ -243,7 +243,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) /* The value */ if(ptr) - vp = va_arg(ap, void *); + vp = HDva_arg(ap, void *); switch(type[0]) { case 'a': if(ptr) { @@ -253,7 +253,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - haddr_t addr = va_arg(ap, haddr_t); + haddr_t addr = HDva_arg(ap, haddr_t); HDfprintf(out, "%a", addr); } /* end else */ @@ -267,8 +267,8 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - /* Can't pass hbool_t to va_arg() */ - hbool_t bool_var = (hbool_t)va_arg(ap, int); + /* Can't pass hbool_t to HDva_arg() */ + hbool_t bool_var = (hbool_t)HDva_arg(ap, int); if(TRUE == bool_var) HDfprintf(out, "TRUE"); else if(!bool_var) @@ -286,7 +286,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - double dbl = va_arg(ap, double); + double dbl = HDva_arg(ap, double); HDfprintf(out, "%g", dbl); } /* end else */ @@ -302,7 +302,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5D_alloc_time_t alloc_time = (H5D_alloc_time_t)va_arg(ap, int); + H5D_alloc_time_t alloc_time = (H5D_alloc_time_t)HDva_arg(ap, int); switch(alloc_time) { case H5D_ALLOC_TIME_ERROR: @@ -340,7 +340,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5FD_mpio_collective_opt_t opt = (H5FD_mpio_collective_opt_t)va_arg(ap, int); + H5FD_mpio_collective_opt_t opt = (H5FD_mpio_collective_opt_t)HDva_arg(ap, int); switch(opt) { case H5FD_MPIO_COLLECTIVE_IO: @@ -366,7 +366,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5D_fill_time_t fill_time = (H5D_fill_time_t)va_arg(ap, int); + H5D_fill_time_t fill_time = (H5D_fill_time_t)HDva_arg(ap, int); switch(fill_time) { case H5D_FILL_TIME_ERROR: @@ -400,7 +400,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5D_fill_value_t fill_value = (H5D_fill_value_t)va_arg(ap, int); + H5D_fill_value_t fill_value = (H5D_fill_value_t)HDva_arg(ap, int); switch(fill_value) { case H5D_FILL_VALUE_ERROR: @@ -434,7 +434,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5FD_mpio_chunk_opt_t opt = (H5FD_mpio_chunk_opt_t)va_arg(ap, int); + H5FD_mpio_chunk_opt_t opt = (H5FD_mpio_chunk_opt_t)HDva_arg(ap, int); switch(opt) { case H5FD_MPIO_CHUNK_DEFAULT: @@ -464,7 +464,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5D_mpio_actual_io_mode_t actual_io_mode = (H5D_mpio_actual_io_mode_t)va_arg(ap, int); + H5D_mpio_actual_io_mode_t actual_io_mode = (H5D_mpio_actual_io_mode_t)HDva_arg(ap, int); switch(actual_io_mode) { case H5D_MPIO_NO_COLLECTIVE: @@ -502,7 +502,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5D_chunk_index_t idx = (H5D_chunk_index_t)va_arg(ap, int); + H5D_chunk_index_t idx = (H5D_chunk_index_t)HDva_arg(ap, int); switch(idx) { case H5D_CHUNK_IDX_BTREE: @@ -548,7 +548,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5D_layout_t layout = (H5D_layout_t)va_arg(ap, int); + H5D_layout_t layout = (H5D_layout_t)HDva_arg(ap, int); switch(layout) { case H5D_LAYOUT_ERROR: @@ -590,7 +590,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5D_mpio_no_collective_cause_t nocol_cause_mode = (H5D_mpio_no_collective_cause_t)va_arg(ap, int); + H5D_mpio_no_collective_cause_t nocol_cause_mode = (H5D_mpio_no_collective_cause_t)HDva_arg(ap, int); hbool_t flag_already_displayed = FALSE; /* Check for all bit-flags which might be set */ @@ -637,7 +637,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5D_mpio_actual_chunk_opt_mode_t chunk_opt_mode = (H5D_mpio_actual_chunk_opt_mode_t)va_arg(ap, int); + H5D_mpio_actual_chunk_opt_mode_t chunk_opt_mode = (H5D_mpio_actual_chunk_opt_mode_t)HDva_arg(ap, int); switch(chunk_opt_mode) { case H5D_MPIO_NO_CHUNK_OPTIMIZATION: @@ -667,7 +667,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5D_space_status_t space_status = (H5D_space_status_t)va_arg(ap, int); + H5D_space_status_t space_status = (H5D_space_status_t)HDva_arg(ap, int); switch(space_status) { case H5D_SPACE_STATUS_NOT_ALLOCATED: @@ -701,7 +701,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5FD_mpio_xfer_t transfer = (H5FD_mpio_xfer_t)va_arg(ap, int); + H5FD_mpio_xfer_t transfer = (H5FD_mpio_xfer_t)HDva_arg(ap, int); switch(transfer) { case H5FD_MPIO_INDEPENDENT: @@ -727,7 +727,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5D_vds_view_t view = (H5D_vds_view_t)va_arg(ap, int); + H5D_vds_view_t view = (H5D_vds_view_t)HDva_arg(ap, int); switch(view) { case H5D_VDS_ERROR: @@ -763,7 +763,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - herr_t status = va_arg(ap, herr_t); + herr_t status = HDva_arg(ap, herr_t); if(status >= 0) HDfprintf(out, "SUCCEED"); @@ -782,7 +782,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5E_direction_t direction = (H5E_direction_t)va_arg(ap, int); + H5E_direction_t direction = (H5E_direction_t)HDva_arg(ap, int); switch(direction) { case H5E_WALK_UPWARD: @@ -808,7 +808,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5E_error2_t *error = va_arg(ap, H5E_error2_t *); + H5E_error2_t *error = HDva_arg(ap, H5E_error2_t *); HDfprintf(out, "0x%lx", (unsigned long)error); } /* end else */ @@ -822,7 +822,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5ES_status_t status = (H5ES_status_t)va_arg(ap, int); + H5ES_status_t status = (H5ES_status_t)HDva_arg(ap, int); switch(status) { case H5ES_STATUS_IN_PROGRESS: @@ -853,7 +853,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5E_type_t etype = (H5E_type_t)va_arg(ap, int); + H5E_type_t etype = (H5E_type_t)HDva_arg(ap, int); switch(etype) { case H5E_MAJOR: @@ -887,7 +887,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5F_close_degree_t degree = (H5F_close_degree_t)va_arg(ap, int); + H5F_close_degree_t degree = (H5F_close_degree_t)HDva_arg(ap, int); switch(degree) { case H5F_CLOSE_DEFAULT: @@ -921,7 +921,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5F_fspace_strategy_t fs_strategy = (H5F_fspace_strategy_t)va_arg(ap, int); + H5F_fspace_strategy_t fs_strategy = (H5F_fspace_strategy_t)HDva_arg(ap, int); switch(fs_strategy) { case H5F_FSPACE_STRATEGY_FSM_AGGR: @@ -956,7 +956,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5F_mem_t mem_type = (H5F_mem_t)va_arg(ap, int); + H5F_mem_t mem_type = (H5F_mem_t)HDva_arg(ap, int); switch(mem_type) { case H5FD_MEM_NOLIST: @@ -1007,7 +1007,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5F_scope_t scope = (H5F_scope_t)va_arg(ap, int); + H5F_scope_t scope = (H5F_scope_t)HDva_arg(ap, int); switch(scope) { case H5F_SCOPE_LOCAL: @@ -1042,7 +1042,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5F_libver_t libver_vers = (H5F_libver_t)va_arg(ap, int); + H5F_libver_t libver_vers = (H5F_libver_t)HDva_arg(ap, int); switch(libver_vers) { case H5F_LIBVER_EARLIEST: @@ -1084,7 +1084,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5G_obj_t obj_type = (H5G_obj_t)va_arg(ap, int); + H5G_obj_t obj_type = (H5G_obj_t)HDva_arg(ap, int); switch(obj_type) { case H5G_UNKNOWN: @@ -1132,7 +1132,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5G_stat_t *statbuf = va_arg(ap, H5G_stat_t*); + H5G_stat_t *statbuf = HDva_arg(ap, H5G_stat_t*); HDfprintf(out, "0x%lx", (unsigned long)statbuf); } @@ -1166,7 +1166,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - hsize_t hsize = va_arg(ap, hsize_t); + hsize_t hsize = HDva_arg(ap, hsize_t); if(H5S_UNLIMITED == hsize) HDfprintf(out, "H5S_UNLIMITED"); @@ -1196,7 +1196,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - hssize_t hssize = va_arg(ap, hssize_t); + hssize_t hssize = HDva_arg(ap, hssize_t); HDfprintf(out, "%Hd", hssize); asize[argno] = (hssize_t)hssize; @@ -1217,7 +1217,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - hid_t obj = va_arg(ap, hid_t); + hid_t obj = HDva_arg(ap, hid_t); if(H5P_DEFAULT == obj) HDfprintf(out, "H5P_DEFAULT"); @@ -1405,7 +1405,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5_index_t idx_type = (H5_index_t)va_arg(ap, int); + H5_index_t idx_type = (H5_index_t)HDva_arg(ap, int); switch(idx_type) { case H5_INDEX_UNKNOWN: @@ -1439,7 +1439,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5_iter_order_t order = (H5_iter_order_t)va_arg(ap, int); + H5_iter_order_t order = (H5_iter_order_t)HDva_arg(ap, int); switch(order) { case H5_ITER_UNKNOWN: @@ -1486,7 +1486,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - int is = va_arg(ap, int); + int is = HDva_arg(ap, int); HDfprintf (out, "%d", is); asize[argno] = is; @@ -1501,7 +1501,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5I_type_t id_type = (H5I_type_t)va_arg(ap, int); + H5I_type_t id_type = (H5I_type_t)HDva_arg(ap, int); switch (id_type) { case H5I_UNINIT: @@ -1592,7 +1592,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - unsigned iu = va_arg(ap, unsigned); + unsigned iu = HDva_arg(ap, unsigned); HDfprintf(out, "%u", iu); asize[argno] = iu; @@ -1615,7 +1615,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5L_type_t link_type = (H5L_type_t)va_arg(ap, int); + H5L_type_t link_type = (H5L_type_t)HDva_arg(ap, int); switch(link_type) { case H5L_TYPE_ERROR: @@ -1662,7 +1662,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) } /* end if */ #ifdef H5_HAVE_PARALLEL else { - MPI_Comm comm = va_arg(ap, MPI_Comm); + MPI_Comm comm = HDva_arg(ap, MPI_Comm); HDfprintf(out, "%ld", (long)comm); } /* end else */ @@ -1678,7 +1678,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) } /* end if */ #ifdef H5_HAVE_PARALLEL else { - MPI_Info info = va_arg(ap, MPI_Info); + MPI_Info info = HDva_arg(ap, MPI_Info); HDfprintf(out, "%ld", (long)info); } /* end else */ @@ -1693,7 +1693,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5FD_mem_t mt = (H5FD_mem_t)va_arg(ap, int); + H5FD_mem_t mt = (H5FD_mem_t)HDva_arg(ap, int); switch(mt) { case H5FD_MEM_NOLIST: @@ -1752,7 +1752,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - off_t offset = va_arg(ap, off_t); + off_t offset = HDva_arg(ap, off_t); HDfprintf (out, "%ld", (long)offset); } /* end else */ @@ -1768,7 +1768,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5O_type_t objtype = (H5O_type_t)va_arg(ap, int); + H5O_type_t objtype = (H5O_type_t)HDva_arg(ap, int); switch(objtype) { case H5O_TYPE_UNKNOWN: @@ -1812,7 +1812,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - hid_t pclass_id = va_arg(ap, hid_t); + hid_t pclass_id = HDva_arg(ap, hid_t); char *class_name = NULL; H5P_genclass_t *pclass; @@ -1836,7 +1836,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - hobj_ref_t ref = va_arg(ap, hobj_ref_t); + hobj_ref_t ref = HDva_arg(ap, hobj_ref_t); HDfprintf(out, "Reference Object=%a", ref); } /* end else */ @@ -1852,7 +1852,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5R_type_t reftype = (H5R_type_t)va_arg(ap, int); + H5R_type_t reftype = (H5R_type_t)HDva_arg(ap, int); switch(reftype) { case H5R_BADTYPE: @@ -1894,7 +1894,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5S_class_t cls = (H5S_class_t)va_arg(ap, int); + H5S_class_t cls = (H5S_class_t)HDva_arg(ap, int); switch(cls) { case H5S_NO_CLASS: @@ -1928,7 +1928,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5S_seloper_t so = (H5S_seloper_t)va_arg(ap, int); + H5S_seloper_t so = (H5S_seloper_t)HDva_arg(ap, int); switch(so) { case H5S_SELECT_NOOP: @@ -1986,7 +1986,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5S_sel_type st = (H5S_sel_type)va_arg(ap, int); + H5S_sel_type st = (H5S_sel_type)HDva_arg(ap, int); switch(st) { case H5S_SEL_ERROR: @@ -2034,7 +2034,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - const char *str = va_arg(ap, const char *); + const char *str = HDva_arg(ap, const char *); HDfprintf(out, "\"%s\"", str); } /* end else */ @@ -2050,7 +2050,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5T_cset_t cset = (H5T_cset_t)va_arg(ap, int); + H5T_cset_t cset = (H5T_cset_t)HDva_arg(ap, int); switch(cset) { case H5T_CSET_ERROR: @@ -2097,7 +2097,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5T_direction_t direct = (H5T_direction_t)va_arg(ap, int); + H5T_direction_t direct = (H5T_direction_t)HDva_arg(ap, int); switch(direct) { case H5T_DIR_DEFAULT: @@ -2127,7 +2127,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5T_pers_t pers = (H5T_pers_t)va_arg(ap, int); + H5T_pers_t pers = (H5T_pers_t)HDva_arg(ap, int); switch(pers) { case H5T_PERS_DONTCARE: @@ -2157,7 +2157,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5T_norm_t norm = (H5T_norm_t)va_arg(ap, int); + H5T_norm_t norm = (H5T_norm_t)HDva_arg(ap, int); switch(norm) { case H5T_NORM_ERROR: @@ -2191,7 +2191,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5T_order_t order = (H5T_order_t)va_arg(ap, int); + H5T_order_t order = (H5T_order_t)HDva_arg(ap, int); switch(order) { case H5T_ORDER_ERROR: @@ -2233,7 +2233,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5T_pad_t pad = (H5T_pad_t)va_arg(ap, int); + H5T_pad_t pad = (H5T_pad_t)HDva_arg(ap, int); switch(pad) { case H5T_PAD_ERROR: @@ -2271,7 +2271,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5T_sign_t sign = (H5T_sign_t)va_arg(ap, int); + H5T_sign_t sign = (H5T_sign_t)HDva_arg(ap, int); switch(sign) { case H5T_SGN_ERROR: @@ -2305,7 +2305,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5T_class_t type_class = (H5T_class_t)va_arg(ap, int); + H5T_class_t type_class = (H5T_class_t)HDva_arg(ap, int); switch(type_class) { case H5T_NO_CLASS: @@ -2375,7 +2375,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5T_str_t str = (H5T_str_t)va_arg(ap, int); + H5T_str_t str = (H5T_str_t)HDva_arg(ap, int); switch(str) { case H5T_STR_ERROR: @@ -2431,7 +2431,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - htri_t tri_var = va_arg (ap, htri_t); + htri_t tri_var = HDva_arg (ap, htri_t); if(tri_var>0) HDfprintf (out, "TRUE"); @@ -2461,7 +2461,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - unsigned long iul = va_arg(ap, unsigned long); + unsigned long iul = HDva_arg(ap, unsigned long); HDfprintf(out, "%lu", iul); asize[argno] = (hssize_t)iul; @@ -2485,7 +2485,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - unsigned long long iull = va_arg(ap, unsigned long long); + unsigned long long iull = HDva_arg(ap, unsigned long long); HDfprintf(out, "%llu", iull); asize[argno] = (hssize_t)iull; @@ -2508,7 +2508,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5VL_attr_get_t get = (H5VL_attr_get_t)va_arg(ap, int); + H5VL_attr_get_t get = (H5VL_attr_get_t)HDva_arg(ap, int); switch(get) { case H5VL_ATTR_GET_SPACE: @@ -2543,7 +2543,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5VL_attr_specific_t specific = (H5VL_attr_specific_t)va_arg(ap, int); + H5VL_attr_specific_t specific = (H5VL_attr_specific_t)HDva_arg(ap, int); switch(specific) { case H5VL_ATTR_DELETE: @@ -2572,7 +2572,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5VL_class_value_t class_val = (H5VL_class_value_t)va_arg(ap, H5VL_class_value_t); + H5VL_class_value_t class_val = (H5VL_class_value_t)HDva_arg(ap, H5VL_class_value_t); if(H5_VOL_NATIVE == class_val) HDfprintf(out, "H5_VOL_NATIVE"); @@ -2588,7 +2588,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5VL_dataset_get_t get = (H5VL_dataset_get_t)va_arg(ap, int); + H5VL_dataset_get_t get = (H5VL_dataset_get_t)HDva_arg(ap, int); switch(get) { case H5VL_DATASET_GET_SPACE: @@ -2626,7 +2626,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5VL_dataset_specific_t specific = (H5VL_dataset_specific_t)va_arg(ap, int); + H5VL_dataset_specific_t specific = (H5VL_dataset_specific_t)HDva_arg(ap, int); switch(specific) { case H5VL_DATASET_SET_EXTENT: @@ -2652,7 +2652,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5VL_datatype_get_t get = (H5VL_datatype_get_t)va_arg(ap, int); + H5VL_datatype_get_t get = (H5VL_datatype_get_t)HDva_arg(ap, int); switch(get) { case H5VL_DATATYPE_GET_BINARY: @@ -2675,7 +2675,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5VL_datatype_specific_t specific = (H5VL_datatype_specific_t)va_arg(ap, int); + H5VL_datatype_specific_t specific = (H5VL_datatype_specific_t)HDva_arg(ap, int); switch(specific) { case H5VL_DATATYPE_FLUSH: @@ -2698,7 +2698,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5VL_file_get_t get = (H5VL_file_get_t)va_arg(ap, int); + H5VL_file_get_t get = (H5VL_file_get_t)HDva_arg(ap, int); switch(get) { case H5VL_FILE_GET_FAPL: @@ -2733,7 +2733,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5VL_file_specific_t specific = (H5VL_file_specific_t)va_arg(ap, int); + H5VL_file_specific_t specific = (H5VL_file_specific_t)HDva_arg(ap, int); switch(specific) { case H5VL_FILE_FLUSH: @@ -2768,7 +2768,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5VL_group_get_t get = (H5VL_group_get_t)va_arg(ap, int); + H5VL_group_get_t get = (H5VL_group_get_t)HDva_arg(ap, int); switch(get) { case H5VL_GROUP_GET_GCPL: @@ -2791,7 +2791,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5VL_group_specific_t specific = (H5VL_group_specific_t)va_arg(ap, int); + H5VL_group_specific_t specific = (H5VL_group_specific_t)HDva_arg(ap, int); switch(specific) { case H5VL_GROUP_FLUSH: @@ -2814,7 +2814,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5VL_link_create_type_t create = (H5VL_link_create_type_t)va_arg(ap, int); + H5VL_link_create_type_t create = (H5VL_link_create_type_t)HDva_arg(ap, int); switch(create) { case H5VL_LINK_CREATE_HARD: @@ -2840,7 +2840,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5VL_link_get_t get = (H5VL_link_get_t)va_arg(ap, int); + H5VL_link_get_t get = (H5VL_link_get_t)HDva_arg(ap, int); switch(get) { case H5VL_LINK_GET_INFO: @@ -2866,7 +2866,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5VL_link_specific_t specific = (H5VL_link_specific_t)va_arg(ap, int); + H5VL_link_specific_t specific = (H5VL_link_specific_t)HDva_arg(ap, int); switch(specific) { case H5VL_LINK_DELETE: @@ -2892,7 +2892,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5VL_object_get_t get = (H5VL_object_get_t)va_arg(ap, int); + H5VL_object_get_t get = (H5VL_object_get_t)HDva_arg(ap, int); switch(get) { case H5VL_REF_GET_REGION: @@ -2921,7 +2921,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5VL_object_specific_t specific = (H5VL_object_specific_t)va_arg(ap, int); + H5VL_object_specific_t specific = (H5VL_object_specific_t)HDva_arg(ap, int); switch(specific) { case H5VL_OBJECT_CHANGE_REF_COUNT: @@ -2956,7 +2956,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5VL_request_specific_t specific = (H5VL_request_specific_t)va_arg(ap, int); + H5VL_request_specific_t specific = (H5VL_request_specific_t)HDva_arg(ap, int); switch(specific) { case H5VL_REQUEST_WAITANY: @@ -3001,7 +3001,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - vp = va_arg (ap, void *); + vp = HDva_arg (ap, void *); if(vp) HDfprintf(out, "0x%lx", (unsigned long)vp); @@ -3027,7 +3027,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - size_t size = va_arg(ap, size_t); + size_t size = HDva_arg(ap, size_t); HDfprintf(out, "%Zu", size); asize[argno] = (hssize_t)size; @@ -3044,7 +3044,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5Z_SO_scale_type_t scale_type = (H5Z_SO_scale_type_t)va_arg(ap, int); + H5Z_SO_scale_type_t scale_type = (H5Z_SO_scale_type_t)HDva_arg(ap, int); switch(scale_type) { case H5Z_SO_FLOAT_DSCALE: @@ -3074,7 +3074,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5Z_class2_t *filter = va_arg(ap, H5Z_class2_t*); + H5Z_class2_t *filter = HDva_arg(ap, H5Z_class2_t*); HDfprintf(out, "0x%lx", (unsigned long)filter); } /* end else */ @@ -3088,7 +3088,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5Z_EDC_t edc = (H5Z_EDC_t)va_arg(ap, int); + H5Z_EDC_t edc = (H5Z_EDC_t)HDva_arg(ap, int); if(H5Z_DISABLE_EDC == edc) HDfprintf(out, "H5Z_DISABLE_EDC"); @@ -3107,7 +3107,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - H5Z_filter_t id = va_arg(ap, H5Z_filter_t); + H5Z_filter_t id = HDva_arg(ap, H5Z_filter_t); if(H5Z_FILTER_DEFLATE == id) HDfprintf(out, "H5Z_FILTER_DEFLATE"); @@ -3133,7 +3133,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) HDfprintf(out, "NULL"); } /* end if */ else { - ssize_t ssize = va_arg(ap, ssize_t); + ssize_t ssize = HDva_arg(ap, ssize_t); HDfprintf(out, "%Zd", ssize); asize[argno] = (hssize_t)ssize; @@ -3161,7 +3161,7 @@ H5_trace(const double *returning, const char *func, const char *type, ...) (event_time.etime - *returning)); error: - va_end(ap); + HDva_end(ap); if(returning) HDfprintf(out, ";\n"); else { diff --git a/src/H5win32defs.h b/src/H5win32defs.h index 4522228..140afc3 100644 --- a/src/H5win32defs.h +++ b/src/H5win32defs.h @@ -62,9 +62,17 @@ typedef __int64 h5_stat_size_t; #define HDstat(S,B) _stati64(S,B) #define HDstrcasecmp(A,B) _stricmp(A,B) #define HDstrdup(S) _strdup(S) +#define HDstrtok_r(X,Y,Z) strtok_s(X,Y,Z) #define HDtzset() _tzset() #define HDunlink(S) _unlink(S) #define HDwrite(F,M,Z) _write(F,M,Z) +#if (_MSC_VER < 1800) +/* va_copy() does not exist on pre-2013 Visual Studio. Since va_lists are + * just pointers into the stack in those CRTs, the usual work-around + * is to just define the operation as a pointer copy. + */ +#define HDva_copy(D,S) ((D) = (S)) +#endif /* MSC_VER < 1800 */ #ifdef H5_HAVE_VISUAL_STUDIO diff --git a/test/CMakeTests.cmake b/test/CMakeTests.cmake index 3ad9de7..1c26def 100644 --- a/test/CMakeTests.cmake +++ b/test/CMakeTests.cmake @@ -843,6 +843,7 @@ if (HDF5_ENABLE_DEPRECATED_SYMBOLS) -D "TEST_ARGS:STRING=" -D "TEST_EXPECT=0" -D "TEST_MASK_ERROR=true" + -D "ERROR_APPEND=1" -D "TEST_OUTPUT=err_compat.txt" -D "TEST_REFERENCE=err_compat_1" -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/H5TEST" @@ -877,6 +878,7 @@ else () -D "TEST_ARGS:STRING=" -D "TEST_EXPECT=0" -D "TEST_MASK_ERROR=true" + -D "ERROR_APPEND=1" -D "TEST_OUTPUT=error_test.txt" -D "TEST_REFERENCE=error_test_1" -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/H5TEST" @@ -943,6 +945,7 @@ if (BUILD_SHARED_LIBS) -D "TEST_ARGS:STRING=" -D "TEST_EXPECT=0" -D "TEST_MASK_ERROR=true" + -D "ERROR_APPEND=1" -D "TEST_OUTPUT=err_compat.txt" -D "TEST_REFERENCE=err_compat_1" -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/H5TEST-shared" @@ -977,6 +980,7 @@ if (BUILD_SHARED_LIBS) -D "TEST_ARGS:STRING=" -D "TEST_EXPECT=0" -D "TEST_MASK_ERROR=true" + -D "ERROR_APPEND=1" -D "TEST_OUTPUT=error_test.txt" -D "TEST_REFERENCE=error_test_1" -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/H5TEST-shared" diff --git a/test/h5test.c b/test/h5test.c index 0805f06..6aad76a 100644 --- a/test/h5test.c +++ b/test/h5test.c @@ -855,6 +855,7 @@ h5_get_vfd_fapl(hid_t fapl) { const char *env = NULL; /* HDF5_DRIVER environment variable */ const char *tok = NULL; /* strtok pointer */ + char *lasts = NULL; /* Context pointer for strtok_r() call */ char buf[1024]; /* buffer for tokenizing HDF5_DRIVER */ /* Get the environment variable, if it exists */ @@ -877,7 +878,7 @@ h5_get_vfd_fapl(hid_t fapl) */ HDstrncpy(buf, env, sizeof(buf)); buf[sizeof(buf) - 1] = '\0'; - if(NULL == (tok = HDstrtok(buf, " \t\n\r"))) + if(NULL == (tok = HDstrtok_r(buf, " \t\n\r", &lasts))) goto done; if(!HDstrcmp(tok, "sec2")) { @@ -936,7 +937,7 @@ h5_get_vfd_fapl(hid_t fapl) hsize_t fam_size = 100 * 1024 * 1024; /* 100 MB */ /* Was a family size specified in the environment variable? */ - if((tok = HDstrtok(NULL, " \t\n\r"))) + if((tok = HDstrtok_r(NULL, " \t\n\r", &lasts))) fam_size = (hsize_t)(HDstrtod(tok, NULL) * 1024 * 1024); if(H5Pset_fapl_family(fapl, fam_size, H5P_DEFAULT) < 0) goto error; @@ -945,7 +946,7 @@ h5_get_vfd_fapl(hid_t fapl) unsigned log_flags = H5FD_LOG_LOC_IO | H5FD_LOG_ALLOC; /* Were special log file flags specified in the environment variable? */ - if((tok = HDstrtok(NULL, " \t\n\r"))) + if((tok = HDstrtok_r(NULL, " \t\n\r", &lasts))) log_flags = (unsigned)HDstrtol(tok, NULL, 0); if(H5Pset_fapl_log(fapl, NULL, log_flags, (size_t)0) < 0) @@ -990,6 +991,7 @@ h5_get_libver_fapl(hid_t fapl) { const char *env = NULL; /* HDF5_DRIVER environment variable */ const char *tok = NULL; /* strtok pointer */ + char *lasts = NULL; /* Context pointer for strtok_r() call */ char buf[1024]; /* buffer for tokenizing HDF5_DRIVER */ /* Get the environment variable, if it exists */ @@ -1012,7 +1014,7 @@ h5_get_libver_fapl(hid_t fapl) */ HDstrncpy(buf, env, sizeof(buf)); buf[sizeof(buf) - 1] = '\0'; - if(NULL == (tok = HDstrtok(buf, " \t\n\r"))) + if(NULL == (tok = HDstrtok_r(buf, " \t\n\r", &lasts))) goto done; if(!HDstrcmp(tok, "latest")) { @@ -1053,6 +1055,7 @@ h5_get_vol_fapl(hid_t fapl) { const char *env = NULL; const char *tok = NULL; + char *lasts = NULL; /* Context pointer for strtok_r() call */ htri_t connector_is_registered; char buf[1024]; /* Buffer for tokenizing HDF5_VOL_CONNECTOR */ void *vol_info = NULL; /* VOL connector info */ @@ -1075,7 +1078,7 @@ h5_get_vol_fapl(hid_t fapl) */ HDstrncpy(buf, env, sizeof(buf)); buf[sizeof(buf) - 1] = '\0'; - if(NULL == (tok = HDstrtok(buf, " \t\n\r"))) + if(NULL == (tok = HDstrtok_r(buf, " \t\n\r", &lasts))) goto done; /* First, check to see if the connector is already registered */ @@ -1105,7 +1108,7 @@ h5_get_vol_fapl(hid_t fapl) } /* end else */ /* Was there any connector info specified in the environment variable? */ - if(NULL != (tok = HDstrtok(NULL, " \t\n\r"))) + if(NULL != (tok = HDstrtok_r(NULL, " \t\n\r", &lasts))) if(H5VLconnector_str_to_info(tok, connector_id, &vol_info) < 0) goto error; diff --git a/test/tattr.c b/test/tattr.c index 3a7cf2c..63a0580 100644 --- a/test/tattr.c +++ b/test/tattr.c @@ -143,6 +143,10 @@ float attr_data5=-5.123F; /* Test data for 5th attribute */ #define DIM1 100 #define RANK 2 +/* Used by test_attr_info_null_info_pointer() */ +#define GET_INFO_NULL_POINTER_ATTR_NAME "NullInfoPointerAttr" + + /* Attribute iteration struct */ typedef struct { H5_iter_order_t order; /* Direction of iteration */ @@ -5875,6 +5879,65 @@ test_attr_info_by_idx(hbool_t new_format, hid_t fcpl, hid_t fapl) } /* test_attr_info_by_idx() */ +/*************************************************************** +** +** test_attr_info_null_info_pointer(): A test to ensure that +** passing a NULL attribute info pointer to H5Aget_info +** (_by_name/_by_idx) doesn't cause bad behavior. +** +****************************************************************/ +static void +test_attr_info_null_info_pointer(hid_t fcpl, hid_t fapl) +{ + herr_t err_ret = -1; + hid_t fid; + hid_t attr; + hid_t sid; + + /* Create dataspace for dataset & attributes */ + sid = H5Screate(H5S_SCALAR); + CHECK(sid, FAIL, "H5Screate"); + + /* Create file */ + fid = H5Fcreate(FILENAME, H5F_ACC_TRUNC, fcpl, fapl); + CHECK(fid, FAIL, "H5Fcreate"); + + /* Create attribute */ + attr = H5Acreate2(fid, GET_INFO_NULL_POINTER_ATTR_NAME, H5T_NATIVE_UINT, sid, H5P_DEFAULT, H5P_DEFAULT); + CHECK(attr, FAIL, "H5Acreate2"); + + H5E_BEGIN_TRY { + err_ret = H5Aget_info(attr, NULL); + } H5E_END_TRY; + + CHECK(err_ret, SUCCEED, "H5Aget_info"); + + H5E_BEGIN_TRY { + err_ret = H5Aget_info_by_name(fid, ".", GET_INFO_NULL_POINTER_ATTR_NAME, NULL, H5P_DEFAULT); + } H5E_END_TRY; + + CHECK(err_ret, SUCCEED, "H5Aget_info_by_name"); + + H5E_BEGIN_TRY { + err_ret = H5Aget_info_by_idx(fid, ".", H5_INDEX_NAME, H5_ITER_INC, 0, NULL, H5P_DEFAULT); + } H5E_END_TRY; + + CHECK(err_ret, SUCCEED, "H5Aget_info_by_idx"); + + /* Close dataspace */ + err_ret = H5Sclose(sid); + CHECK(err_ret, FAIL, "H5Sclose"); + + /* Close attribute */ + err_ret = H5Aclose(attr); + CHECK(err_ret, FAIL, "H5Aclose"); + + /* Close file */ + err_ret = H5Fclose(fid); + CHECK(err_ret, FAIL, "H5Fclose"); +} + + /**************************************************************** ** ** test_attr_delete_by_idx(): Test basic H5A (attribute) code. @@ -10875,6 +10938,7 @@ test_attr(void) test_attr_null_space(my_fcpl, my_fapl); /* Test storing attribute with NULL dataspace */ test_attr_deprec(fcpl, my_fapl); /* Test deprecated API routines */ test_attr_many(new_format, my_fcpl, my_fapl); /* Test storing lots of attributes */ + test_attr_info_null_info_pointer(my_fcpl, my_fapl); /* Test passing a NULL attribute info pointer to H5Aget_info(_by_name/_by_idx) */ /* Attribute creation order tests */ test_attr_corder_create_basic(my_fcpl, my_fapl);/* Test creating an object w/attribute creation order info */ @@ -10919,6 +10983,7 @@ test_attr(void) test_attr_null_space(fcpl, my_fapl); /* Test storing attribute with NULL dataspace */ test_attr_deprec(fcpl, my_fapl); /* Test deprecated API routines */ test_attr_many(new_format, fcpl, my_fapl); /* Test storing lots of attributes */ + test_attr_info_null_info_pointer(fcpl, my_fapl); /* Test passing a NULL attribute info pointer to H5Aget_info(_by_name/_by_idx) */ /* New attribute API routine tests, on old-format storage */ test_attr_info_by_idx(new_format, fcpl, my_fapl); /* Test querying attribute info by index */ diff --git a/test/tvlstr.c b/test/tvlstr.c index 68d1070..da6195c 100644 --- a/test/tvlstr.c +++ b/test/tvlstr.c @@ -880,7 +880,7 @@ static void test_write_same_element(void) fspace = H5Screate_simple(SPACE1_RANK, fdim, NULL); CHECK(fspace, FAIL, "H5Screate_simple"); - dataset1 = H5Dcreate(file1, DATASET, dtype, fspace, H5P_DEFAULT, + dataset1 = H5Dcreate2(file1, DATASET, dtype, fspace, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); CHECK(dataset1, FAIL, "H5Dcreate"); @@ -905,7 +905,7 @@ static void test_write_same_element(void) file1 = H5Fopen(DATAFILE3, H5F_ACC_RDWR, H5P_DEFAULT); CHECK(file1, FAIL, "H5Fopen"); - dataset1 = H5Dopen(file1, DATASET, H5P_DEFAULT); + dataset1 = H5Dopen2(file1, DATASET, H5P_DEFAULT); CHECK(dataset1, FAIL, "H5Dopen"); fspace = H5Dget_space(dataset1); diff --git a/tools/test/h5copy/CMakeTests.cmake b/tools/test/h5copy/CMakeTests.cmake index 924ade1..f31068b 100644 --- a/tools/test/h5copy/CMakeTests.cmake +++ b/tools/test/h5copy/CMakeTests.cmake @@ -30,6 +30,7 @@ set (LIST_OTHER_TEST_FILES ${HDF5_TOOLS_TEST_H5COPY_SOURCE_DIR}/testfiles/h5copy_misc1.out + ${HDF5_TOOLS_TEST_H5COPY_SOURCE_DIR}/testfiles/h5copy_misc1.err ${HDF5_TOOLS_TEST_H5COPY_SOURCE_DIR}/testfiles/tudfilter.h5.txt ${HDF5_TOOLS_TEST_H5COPY_SOURCE_DIR}/testfiles/tudfilter.h5_ERR.txt ${HDF5_TOOLS_TEST_H5COPY_SOURCE_DIR}/testfiles/h5copy_plugin_fail_ERR.out.h5.txt @@ -250,6 +251,7 @@ -D "TEST_OUTPUT=./testfiles/${testname}.out.out" -D "TEST_EXPECT=${resultcode}" -D "TEST_REFERENCE=./testfiles/${testname}.out" + -D "TEST_ERRREF=./testfiles/${testname}.err" -D "TEST_MASK=true" -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" ) diff --git a/tools/test/h5copy/testfiles/h5copy_misc1.err b/tools/test/h5copy/testfiles/h5copy_misc1.err new file mode 100644 index 0000000..2c2c867 --- /dev/null +++ b/tools/test/h5copy/testfiles/h5copy_misc1.err @@ -0,0 +1 @@ +h5copy error: group </g1> doesn't exist. Use -p to create parent groups. diff --git a/tools/test/h5copy/testfiles/h5copy_misc1.out b/tools/test/h5copy/testfiles/h5copy_misc1.out index 1624f2b..1c7181b 100644 --- a/tools/test/h5copy/testfiles/h5copy_misc1.out +++ b/tools/test/h5copy/testfiles/h5copy_misc1.out @@ -1,3 +1,2 @@ Copying file <./testfiles/h5copytst.h5> and object </simple> to file <./testfiles/h5copy_misc1.out.h5> and object </g1/g2/simple> Error in copy...Exiting -h5copy error: group </g1> doesn't exist. Use -p to create parent groups. diff --git a/tools/test/h5copy/testh5copy.sh.in b/tools/test/h5copy/testh5copy.sh.in index 203bfef..50758b5 100644 --- a/tools/test/h5copy/testh5copy.sh.in +++ b/tools/test/h5copy/testh5copy.sh.in @@ -60,6 +60,7 @@ $SRC_H5COPY_TESTFILES/h5copy_extlinks_trg.h5 # List of expect files that will be copied over to local test dir LIST_OTHER_TEST_FILES=" $SRC_H5COPY_TESTFILES/h5copy_misc1.out +$SRC_H5COPY_TESTFILES/h5copy_misc1.err " H5COPY=../../src/h5copy/h5copy # The tool name @@ -396,6 +397,7 @@ CMP_OUTPUT() TOOLTEST_FAIL() { expectout="$TESTDIR/$1" + expecterr="$TESTDIR/`basename $1 .out`.err" actualout="$TESTDIR/$1.actualout" actualerr="$TESTDIR/$1.actualerr" actualout_sav=${actualout}-sav @@ -426,10 +428,7 @@ TOOLTEST_FAIL() echo " PASSED" # Verifying output text from h5copy if [ "$expectout" != "SKIP" ]; then - # combine stderr to stdout to compare the output at once. - # We may seperate stdout and stderr later. - cat $actualerr >> $actualout - CMP_OUTPUT $expectout $actualout + CMP_OUTPUT $expecterr $actualerr fi else echo "*FAILED*" diff --git a/tools/test/h5diff/CMakeTests.cmake b/tools/test/h5diff/CMakeTests.cmake index e06f069..24646b0 100644 --- a/tools/test/h5diff/CMakeTests.cmake +++ b/tools/test/h5diff/CMakeTests.cmake @@ -168,21 +168,12 @@ ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_452.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_453.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_454.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_454_ERR.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_454_ERR.err + ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/dangling_link.err ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_455.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_455_ERR.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_455_ERR.err ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_456.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_457.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_457_ERR.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_457_ERR.err ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_458.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_458_ERR.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_458_ERR.err ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_459.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_459_ERR.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_459_ERR.err ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_465.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_466.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_467.txt @@ -238,7 +229,6 @@ ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_63.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_600.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_601.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_601_ERR.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_601_ERR.err ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_603.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_604.txt @@ -293,6 +283,7 @@ ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_8625.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_8639.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_ud.txt + ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_udfail.err ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_udfail.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_v1.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_v2.txt @@ -400,47 +391,6 @@ endif () endmacro () - macro (ADD_H5_ERR_TEST resultfile resultcode) - # If using memchecker add tests without using scripts - if (HDF5_ENABLE_USING_MEMCHECKER) - add_test (NAME H5DIFF_ERR-${resultfile} COMMAND $<TARGET_FILE:h5diff> --enable-error-stack ${ARGN}) - set_tests_properties (H5DIFF_ERR-${resultfile} PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles") - if (NOT "${resultcode}" STREQUAL "0") - set_tests_properties (H5DIFF_ERR-${resultfile} PROPERTIES WILL_FAIL "true") - endif () - if (NOT "${last_test}" STREQUAL "") - set_tests_properties (H5DIFF_ERR-${resultfile} PROPERTIES DEPENDS ${last_test}) - endif () - else () - # Remove any output file left over from previous test run - add_test ( - NAME H5DIFF_ERR-${resultfile}-clear-objects - COMMAND ${CMAKE_COMMAND} - -E remove - testfiles/${resultfile}_ERR.out - testfiles/${resultfile}_ERR.out.err - ) - if (NOT "${last_test}" STREQUAL "") - set_tests_properties (H5DIFF_ERR-${resultfile}-clear-objects PROPERTIES DEPENDS ${last_test}) - endif () - add_test ( - NAME H5DIFF_ERR-${resultfile} - COMMAND "${CMAKE_COMMAND}" - -D "TEST_PROGRAM=$<TARGET_FILE:h5diff>" - -D "TEST_ARGS:STRING=--enable-error-stack;${ARGN}" - -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles" - -D "TEST_OUTPUT=${resultfile}_ERR.out" - -D "TEST_EXPECT=${resultcode}" - -D "TEST_REFERENCE=${resultfile}_ERR.txt" - -D "TEST_MASK_ERROR=true" - -D "TEST_APPEND=EXIT CODE:" - -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" - ) - set_tests_properties (H5DIFF_ERR-${resultfile} PROPERTIES DEPENDS H5DIFF_ERR-${resultfile}-clear-objects) - endif () - set (last_test "H5DIFF_ERR-${resultfile}") - endmacro () - macro (ADD_PH5_TEST resultfile resultcode) # If using memchecker add tests without using scripts if (HDF5_ENABLE_USING_MEMCHECKER) @@ -529,53 +479,6 @@ endif () endmacro () - macro (ADD_H5_UD_ERR_TEST testname resultcode resultfile) - if (NOT HDF5_ENABLE_USING_MEMCHECKER) - # Remove any output file left over from previous test run - add_test ( - NAME H5DIFF_UD_ERR-${testname}-clearall-objects - COMMAND ${CMAKE_COMMAND} - -E remove - testfiles/${resultfile}_ERR.out - testfiles/${resultfile}_ERR.out.err - ) - if ("${resultcode}" STREQUAL "2") - add_test ( - NAME H5DIFF_UD_ERR-${testname} - COMMAND "${CMAKE_COMMAND}" - -D "TEST_PROGRAM=$<TARGET_FILE:h5diff-shared>" - -D "TEST_ARGS:STRING=--enable-error-stack;${ARGN}" - -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles" - -D "TEST_OUTPUT=${resultfile}_ERR.out" - -D "TEST_EXPECT=${resultcode}" - -D "TEST_REFERENCE=${resultfile}_ERR.txt" - -D "TEST_MASK_ERROR=true" - -D "TEST_APPEND=EXIT CODE:" - -D "TEST_ENV_VAR=HDF5_PLUGIN_PATH" - -D "TEST_ENV_VALUE=${CMAKE_BINARY_DIR}" - -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" - ) - else () - add_test ( - NAME H5DIFF_UD_ERR-${testname} - COMMAND "${CMAKE_COMMAND}" - -D "TEST_PROGRAM=$<TARGET_FILE:h5diff-shared>" - -D "TEST_ARGS:STRING=--enable-error-stack;${ARGN}" - -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles" - -D "TEST_OUTPUT=${resultfile}_ERR.out" - -D "TEST_EXPECT=${resultcode}" - -D "TEST_REFERENCE=${resultfile}_ERR.txt" - -D "TEST_MASK_ERROR=true" - -D "TEST_APPEND=EXIT CODE:" - -D "TEST_ENV_VAR=HDF5_PLUGIN_PATH" - -D "TEST_ENV_VALUE=${CMAKE_BINARY_DIR}/plugins" - -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" - ) - endif () - set_tests_properties (H5DIFF_UD_ERR-${testname} PROPERTIES DEPENDS H5DIFF_UD_ERR-${testname}-clearall-objects) - endif () - endmacro () - ############################################################################## ############################################################################## ### T H E T E S T S ### @@ -798,26 +701,16 @@ h5diff_453.out.err h5diff_454.out h5diff_454.out.err - h5diff_454_ERR.out - h5diff_454_ERR.out.err h5diff_455.out h5diff_455.out.err - h5diff_455_ERR.out - h5diff_455_ERR.out.err h5diff_456.out h5diff_456.out.err h5diff_457.out h5diff_457.out.err - h5diff_457_ERR.out - h5diff_457_ERR.out.err h5diff_458.out h5diff_458.out.err - h5diff_458_ERR.out - h5diff_458_ERR.out.err h5diff_459.out h5diff_459.out.err - h5diff_459_ERR.out - h5diff_459_ERR.out.err h5diff_465.out h5diff_465.out.err h5diff_466.out @@ -922,8 +815,6 @@ h5diff_600.out.err h5diff_601.out h5diff_601.out.err - h5diff_601_ERR.out - h5diff_601_ERR.out.err h5diff_603.out h5diff_603.out.err h5diff_604.out @@ -1181,7 +1072,6 @@ ADD_H5_TEST (h5diff_600 1 ${FILE1}) # 6.1: Check if non-exist object name is specified ADD_H5_TEST (h5diff_601 2 ${FILE1} ${FILE1} nono_obj) -ADD_H5_ERR_TEST (h5diff_601 2 ${FILE1} ${FILE1} nono_obj) # ############################################################################## # # -d @@ -1481,26 +1371,21 @@ ADD_H5_TEST (h5diff_453 2 --follow-symlinks -v --no-dangling-links ${FILE13} $ # dangling link found for soft links (obj to obj) ADD_H5_TEST (h5diff_454 2 --follow-symlinks -v --no-dangling-links ${FILE13} ${FILE13} /softlink_dset2 /softlink_noexist) -ADD_H5_ERR_TEST (h5diff_454 2 --follow-symlinks -v --no-dangling-links ${FILE13} ${FILE13} /softlink_dset2 /softlink_noexist) # dangling link found for soft links (obj to obj) Both dangle links ADD_H5_TEST (h5diff_455 2 --follow-symlinks -v --no-dangling-links ${FILE13} ${FILE13} /softlink_noexist /softlink_noexist) -ADD_H5_ERR_TEST (h5diff_455 2 --follow-symlinks -v --no-dangling-links ${FILE13} ${FILE13} /softlink_noexist /softlink_noexist) # dangling link found for ext links (FILE to FILE) ADD_H5_TEST (h5diff_456 2 --follow-symlinks -v --no-dangling-links ${FILE15} ${FILE15}) # dangling link found for ext links (obj to obj). target file exist ADD_H5_TEST (h5diff_457 2 --follow-symlinks -v --no-dangling-links ${FILE15} ${FILE15} /ext_link_dset1 /ext_link_noexist1) -ADD_H5_ERR_TEST (h5diff_457 2 --follow-symlinks -v --no-dangling-links ${FILE15} ${FILE15} /ext_link_dset1 /ext_link_noexist1) # dangling link found for ext links (obj to obj). target file NOT exist ADD_H5_TEST (h5diff_458 2 --follow-symlinks -v --no-dangling-links ${FILE15} ${FILE15} /ext_link_dset1 /ext_link_noexist2) -ADD_H5_ERR_TEST (h5diff_458 2 --follow-symlinks -v --no-dangling-links ${FILE15} ${FILE15} /ext_link_dset1 /ext_link_noexist2) # dangling link found for ext links (obj to obj). Both dangle links ADD_H5_TEST (h5diff_459 2 --follow-symlinks -v --no-dangling-links ${FILE15} ${FILE15} /ext_link_noexist1 /ext_link_noexist2) -ADD_H5_ERR_TEST (h5diff_459 2 --follow-symlinks -v --no-dangling-links ${FILE15} ${FILE15} /ext_link_noexist1 /ext_link_noexist2) # dangling link --follow-symlinks (obj vs obj) # (HDFFV-7836) diff --git a/tools/test/h5diff/h5diff_plugin.sh.in b/tools/test/h5diff/h5diff_plugin.sh.in index 212f5d6..341cba5 100644 --- a/tools/test/h5diff/h5diff_plugin.sh.in +++ b/tools/test/h5diff/h5diff_plugin.sh.in @@ -62,6 +62,7 @@ LIST_HDF5_TEST_FILES=" $SRC_H5DIFF_TESTFILES/tudfilter.h5 $SRC_H5DIFF_TESTFILES/tudfilter2.h5 $SRC_H5DIFF_TESTFILES/h5diff_ud.txt +$SRC_H5DIFF_TESTFILES/h5diff_udfail.err $SRC_H5DIFF_TESTFILES/h5diff_udfail.txt " @@ -204,7 +205,7 @@ VERIFY() { TOOLTEST() { expect="$TESTDIR/$1" actual="$TESTDIR/`basename $1 .txt`.out" - actual_err="$TESTDIR/`basename $1 .txt`.err" + actual_err="$TESTDIR/`basename $1 .txt`.out.err" actual_sav=${actual}-sav actual_err_sav=${actual_err}-sav shift @@ -287,6 +288,90 @@ TOOLTEST() { rm -f $actual_sorted $expect_sorted fi } +# Same as TOOLSET except only err file checked +TOOLTEST_ERR() { + expect="$TESTDIR/$1" + expect_err="$TESTDIR/`basename $1 .txt`.err" + actual="$TESTDIR/`basename $1 .txt`.out" + actual_err="$TESTDIR/`basename $1 .txt`.out.err" + actual_sav=${actual}-sav + actual_err_sav=${actual_err}-sav + shift + if test -n "$pmode"; then + RUNCMD=$RUNPARALLEL + else + RUNCMD=$RUNSERIAL + fi + + # Run test. + TESTING $H5DIFF $@ + ( + #echo "#############################" + #echo "Expected output for '$H5DIFF $@'" + #echo "#############################" + cd $TESTDIR + eval $ENVCMD $RUNCMD $H5DIFF_BIN "$@" + ) >$actual 2>$actual_err + EXIT_CODE=$? + # save actual and actual_err in case they are needed later. + cp $actual $actual_sav + STDOUT_FILTER $actual + cp $actual_err $actual_err_sav + STDERR_FILTER $actual_err + # don't add exit code check in pmode, as it causes failure. (exit code + # is from mpirun not tool) + # if any problem occurs relate to an exit code, it will be caught in + # serial mode, so the test is fullfilled. + if test $h5haveexitcode = 'yes' -a -z "$pmode"; then + echo "EXIT CODE: $EXIT_CODE" >> $actual + fi + + if [ ! -f $expect ]; then + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" + elif $CMP $expect_err $actual_err; then + echo " PASSED" + elif test $h5haveexitcode = 'yes' -a -z "$pmode"; then + echo "*FAILED*" + echo " Expected result ($expect_err) differs from actual result ($actual_err)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect_err $actual_err |sed 's/^/ /' + else + # parallel mode output are often of different ordering from serial + # output. If the sorted expect_err and actual_err files compare the same, + # it is safe to assume the actual output match the expected file. + expect_sorted=expect_sorted + actual_sorted=actual_sorted + sort $expect_err -o $expect_sorted + sort $actual_err -o $actual_sorted + mv $expect_sorted.noexit $expect_sorted + if $CMP $expect_sorted $actual_sorted; then + echo " PASSED" + else + echo "*FAILED*" + nerrors="`expr $nerrors + 1`" + if test yes = "$verbose"; then + echo "====Expected result ($expect_sorted) differs from actual result ($actual_sorted)" + $DIFF $expect_sorted $actual_sorted |sed 's/^/ /' + echo "====The actual output ($actual_sav)" + sed 's/^/ /' < $actual_sav + echo "====The actual stderr ($actual_err_sav)" + sed 's/^/ /' < $actual_err_sav + echo "====End of actual stderr ($actual_err_sav)" + echo "" + fi + fi + fi + + # Clean up output file + if test -z "$HDF5_NOCLEANUP"; then + rm -f $actual $actual_err $actual_sav $actual_err_sav + rm -f $actual_sorted $expect_sorted + fi +} ############################################################################## ### T H E T E S T S diff --git a/tools/test/h5diff/testfiles/h5diff_459_ERR.err b/tools/test/h5diff/testfiles/dangling_link.err index 82802a1..82802a1 100644 --- a/tools/test/h5diff/testfiles/h5diff_459_ERR.err +++ b/tools/test/h5diff/testfiles/dangling_link.err diff --git a/tools/test/h5diff/testfiles/h5diff_454_ERR.err b/tools/test/h5diff/testfiles/h5diff_454_ERR.err deleted file mode 100644 index 82802a1..0000000 --- a/tools/test/h5diff/testfiles/h5diff_454_ERR.err +++ /dev/null @@ -1,4 +0,0 @@ -H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): - #000: (file name) line (number) in h5diff(): treat dangling link as error - major: Failure in tools library - minor: error in function diff --git a/tools/test/h5diff/testfiles/h5diff_454_ERR.txt b/tools/test/h5diff/testfiles/h5diff_454_ERR.txt deleted file mode 100644 index 4501071..0000000 --- a/tools/test/h5diff/testfiles/h5diff_454_ERR.txt +++ /dev/null @@ -1,6 +0,0 @@ -Warning: </softlink_noexist> is a dangling link. -H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): - #000: (file name) line (number) in h5diff(): treat dangling link as error - major: Failure in tools library - minor: error in function -EXIT CODE: 2 diff --git a/tools/test/h5diff/testfiles/h5diff_455_ERR.err b/tools/test/h5diff/testfiles/h5diff_455_ERR.err deleted file mode 100644 index 82802a1..0000000 --- a/tools/test/h5diff/testfiles/h5diff_455_ERR.err +++ /dev/null @@ -1,4 +0,0 @@ -H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): - #000: (file name) line (number) in h5diff(): treat dangling link as error - major: Failure in tools library - minor: error in function diff --git a/tools/test/h5diff/testfiles/h5diff_455_ERR.txt b/tools/test/h5diff/testfiles/h5diff_455_ERR.txt deleted file mode 100644 index 4501071..0000000 --- a/tools/test/h5diff/testfiles/h5diff_455_ERR.txt +++ /dev/null @@ -1,6 +0,0 @@ -Warning: </softlink_noexist> is a dangling link. -H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): - #000: (file name) line (number) in h5diff(): treat dangling link as error - major: Failure in tools library - minor: error in function -EXIT CODE: 2 diff --git a/tools/test/h5diff/testfiles/h5diff_457_ERR.err b/tools/test/h5diff/testfiles/h5diff_457_ERR.err deleted file mode 100644 index 82802a1..0000000 --- a/tools/test/h5diff/testfiles/h5diff_457_ERR.err +++ /dev/null @@ -1,4 +0,0 @@ -H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): - #000: (file name) line (number) in h5diff(): treat dangling link as error - major: Failure in tools library - minor: error in function diff --git a/tools/test/h5diff/testfiles/h5diff_457_ERR.txt b/tools/test/h5diff/testfiles/h5diff_457_ERR.txt deleted file mode 100644 index 9d73750..0000000 --- a/tools/test/h5diff/testfiles/h5diff_457_ERR.txt +++ /dev/null @@ -1,6 +0,0 @@ -Warning: </ext_link_noexist1> is a dangling link. -H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): - #000: (file name) line (number) in h5diff(): treat dangling link as error - major: Failure in tools library - minor: error in function -EXIT CODE: 2 diff --git a/tools/test/h5diff/testfiles/h5diff_458_ERR.err b/tools/test/h5diff/testfiles/h5diff_458_ERR.err deleted file mode 100644 index 82802a1..0000000 --- a/tools/test/h5diff/testfiles/h5diff_458_ERR.err +++ /dev/null @@ -1,4 +0,0 @@ -H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): - #000: (file name) line (number) in h5diff(): treat dangling link as error - major: Failure in tools library - minor: error in function diff --git a/tools/test/h5diff/testfiles/h5diff_458_ERR.txt b/tools/test/h5diff/testfiles/h5diff_458_ERR.txt deleted file mode 100644 index b084914..0000000 --- a/tools/test/h5diff/testfiles/h5diff_458_ERR.txt +++ /dev/null @@ -1,6 +0,0 @@ -Warning: </ext_link_noexist2> is a dangling link. -H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): - #000: (file name) line (number) in h5diff(): treat dangling link as error - major: Failure in tools library - minor: error in function -EXIT CODE: 2 diff --git a/tools/test/h5diff/testfiles/h5diff_459_ERR.txt b/tools/test/h5diff/testfiles/h5diff_459_ERR.txt deleted file mode 100644 index 9d73750..0000000 --- a/tools/test/h5diff/testfiles/h5diff_459_ERR.txt +++ /dev/null @@ -1,6 +0,0 @@ -Warning: </ext_link_noexist1> is a dangling link. -H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): - #000: (file name) line (number) in h5diff(): treat dangling link as error - major: Failure in tools library - minor: error in function -EXIT CODE: 2 diff --git a/tools/test/h5diff/testfiles/h5diff_600.txt b/tools/test/h5diff/testfiles/h5diff_600.txt index f3b346a..13d627c 100644 --- a/tools/test/h5diff/testfiles/h5diff_600.txt +++ b/tools/test/h5diff/testfiles/h5diff_600.txt @@ -142,5 +142,4 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] Use h5diff file1 file1 /g1/dset1 /g1/dset2 to compare '/g1/dset1' and '/g1/dset2' in the same file -h5diff error: missing file names EXIT CODE: 1 diff --git a/tools/test/h5diff/testfiles/h5diff_601_ERR.txt b/tools/test/h5diff/testfiles/h5diff_601_ERR.txt deleted file mode 100644 index b58124a..0000000 --- a/tools/test/h5diff/testfiles/h5diff_601_ERR.txt +++ /dev/null @@ -1,6 +0,0 @@ -Object </nono_obj> could not be found in <h5diff_basic1.h5> -H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): - #000: (file name) line (number) in h5diff(): Error: Object could not be found - major: Failure in tools library - minor: error in function -EXIT CODE: 2 diff --git a/tools/test/h5diff/testfiles/h5diff_udfail.err b/tools/test/h5diff/testfiles/h5diff_udfail.err new file mode 100644 index 0000000..d51de38 --- /dev/null +++ b/tools/test/h5diff/testfiles/h5diff_udfail.err @@ -0,0 +1,12 @@ + +file1 file2 +--------------------------------------- + x x / + x x /dynlibud + +group : </> and </> +0 differences found +dataset: </dynlibud> and </dynlibud> +0 differences found +Warning: dataset </dynlibud> cannot be read, user defined filter is not available +EXIT CODE: 2 diff --git a/tools/test/h5diff/testfiles/h5diff_udfail.txt b/tools/test/h5diff/testfiles/h5diff_udfail.txt index d51de38..e6000fc 100644 --- a/tools/test/h5diff/testfiles/h5diff_udfail.txt +++ b/tools/test/h5diff/testfiles/h5diff_udfail.txt @@ -8,5 +8,4 @@ group : </> and </> 0 differences found dataset: </dynlibud> and </dynlibud> 0 differences found -Warning: dataset </dynlibud> cannot be read, user defined filter is not available EXIT CODE: 2 diff --git a/tools/test/h5diff/testh5diff.sh.in b/tools/test/h5diff/testh5diff.sh.in index c464f94..557d2ff 100644 --- a/tools/test/h5diff/testh5diff.sh.in +++ b/tools/test/h5diff/testh5diff.sh.in @@ -226,6 +226,7 @@ $SRC_H5DIFF_TESTFILES/h5diff_451.txt $SRC_H5DIFF_TESTFILES/h5diff_452.txt $SRC_H5DIFF_TESTFILES/h5diff_453.txt $SRC_H5DIFF_TESTFILES/h5diff_454.txt +$SRC_H5DIFF_TESTFILES/dangling_link.err $SRC_H5DIFF_TESTFILES/h5diff_455.txt $SRC_H5DIFF_TESTFILES/h5diff_456.txt $SRC_H5DIFF_TESTFILES/h5diff_457.txt @@ -286,6 +287,7 @@ $SRC_H5DIFF_TESTFILES/h5diff_62.txt $SRC_H5DIFF_TESTFILES/h5diff_63.txt $SRC_H5DIFF_TESTFILES/h5diff_600.txt $SRC_H5DIFF_TESTFILES/h5diff_601.txt +$SRC_H5DIFF_TESTFILES/h5diff_601_ERR.err $SRC_H5DIFF_TESTFILES/h5diff_603.txt $SRC_H5DIFF_TESTFILES/h5diff_604.txt $SRC_H5DIFF_TESTFILES/h5diff_605.txt @@ -462,8 +464,9 @@ TESTING() { # TOOLTEST() { expect="$TESTDIR/$1" + expect_err="$TESTDIR/`basename $1 .txt`.err" actual="$TESTDIR/`basename $1 .txt`.out" - actual_err="$TESTDIR/`basename $1 .txt`.err" + actual_err="$TESTDIR/`basename $1 .txt`.out.err" actual_sav=${actual}-sav actual_err_sav=${actual_err}-sav shift @@ -488,7 +491,6 @@ TOOLTEST() { STDOUT_FILTER $actual cp $actual_err $actual_err_sav STDERR_FILTER $actual_err - cat $actual_err >> $actual # don't add exit code check in pmode, as it causes failure. (exit code # is from mpirun not tool) # if any problem occurs relate to an exit code, it will be caught in diff --git a/tools/test/h5dump/testh5dump.sh.in b/tools/test/h5dump/testh5dump.sh.in index 42e4b07..af5d547 100644 --- a/tools/test/h5dump/testh5dump.sh.in +++ b/tools/test/h5dump/testh5dump.sh.in @@ -490,7 +490,6 @@ TOOLTEST() { STDOUT_FILTER $actual cp $actual_err $actual_err_sav STDERR_FILTER $actual_err - cat $actual_err >> $actual if [ ! -f $expect ]; then # Create the expect file if it doesn't yet exist. @@ -534,7 +533,6 @@ TOOLTEST2() { cd $TESTDIR $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err - cat $actual_err >> $actual if [ ! -f $expect ]; then # Create the expect file if it doesn't yet exist. @@ -593,7 +591,6 @@ TOOLTEST2A() { cd $TESTDIR $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err - cat $actual_err >> $actual if [ ! -f $expect ]; then # Create the expect file if it doesn't yet exist. @@ -660,7 +657,6 @@ TOOLTEST2B() { cd $TESTDIR $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err - cat $actual_err >> $actual if [ ! -f $expectdata ]; then # Create the expect data file if it doesn't yet exist. @@ -717,7 +713,6 @@ TOOLTEST3() { -e 's/H5Eget_auto[1-2]*/H5Eget_auto(1 or 2)/' \ -e 's/H5Eset_auto[1-2]*/H5Eset_auto(1 or 2)/' \ $actual_err > $actual_ext - cat $actual_ext >> $actual if [ ! -f $expect ]; then # Create the expect file if it doesn't yet exist. @@ -776,7 +771,6 @@ TOOLTEST4() { -e 's/H5Eget_auto[1-2]*/H5Eget_auto(1 or 2)/' \ -e 's/H5Eset_auto[1-2]*/H5Eset_auto(1 or 2)/' \ $actual_err > $actual_ext - #cat $actual_ext >> $actual if [ ! -f $expect ]; then # Create the expect file if it doesn't yet exist. @@ -842,7 +836,6 @@ TOOLTEST5() { -e 's/H5Eget_auto[1-2]*/H5Eget_auto(1 or 2)/' \ -e 's/H5Eset_auto[1-2]*/H5Eset_auto(1 or 2)/' \ $actual_err > $actual_ext - #cat $actual_ext >> $actual if [ ! -f $expect ]; then # Create the expect file if it doesn't yet exist. @@ -886,7 +879,6 @@ TOOLTEST_HELP() { cd $TESTDIR $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err - cat $actual_err >> $actual if [ ! -f $expectdata ]; then # Create the expect data file if it doesn't yet exist. diff --git a/tools/test/h5dump/testh5dumppbits.sh.in b/tools/test/h5dump/testh5dumppbits.sh.in index 9cf5c99..febce2c 100644 --- a/tools/test/h5dump/testh5dumppbits.sh.in +++ b/tools/test/h5dump/testh5dumppbits.sh.in @@ -235,7 +235,6 @@ TOOLTEST() { STDOUT_FILTER $actual cp $actual_err $actual_err_sav STDERR_FILTER $actual_err - cat $actual_err >> $actual if [ ! -f $expect ]; then # Create the expect file if it doesn't yet exist. @@ -278,7 +277,6 @@ TOOLTEST2() { cd $TESTDIR $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err - cat $actual_err >> $actual if [ ! -f $expect ]; then # Create the expect file if it doesn't yet exist. @@ -348,7 +346,6 @@ TOOLTEST3() { -e 's/H5Eget_auto[1-2]*/H5Eget_auto(1 or 2)/' \ -e 's/H5Eset_auto[1-2]*/H5Eset_auto(1 or 2)/' \ $actual_err > $actual_ext - cat $actual_ext >> $actual if [ ! -f $expect ]; then # Create the expect file if it doesn't yet exist. @@ -406,7 +403,6 @@ TOOLTEST4() { -e 's/H5Eget_auto[1-2]*/H5Eget_auto(1 or 2)/' \ -e 's/H5Eset_auto[1-2]*/H5Eset_auto(1 or 2)/' \ $actual_err > $actual_ext - #cat $actual_ext >> $actual if [ ! -f $expect ]; then # Create the expect file if it doesn't yet exist. diff --git a/tools/test/h5format_convert/CMakeTests.cmake b/tools/test/h5format_convert/CMakeTests.cmake index 2240813..5792d40 100644 --- a/tools/test/h5format_convert/CMakeTests.cmake +++ b/tools/test/h5format_convert/CMakeTests.cmake @@ -22,10 +22,8 @@ set (HDF5_REFERENCE_FILES h5fc_help.ddl h5fc_nooption.ddl - h5fc_nonexistfile.ddl h5fc_d_file.ddl h5fc_dname.ddl - h5fc_nonexistdset_file.ddl h5fc_v_non_chunked.ddl h5fc_v_bt1.ddl h5fc_v_ndata_bt1.ddl @@ -49,6 +47,12 @@ h5fc_v_err.ddl h5fc_v_err.ddl.err ) + set (HDF5_REFERENCE_ERR_FILES + h5fc_d_file.ddl.err + h5fc_dname.err + h5fc_nonexistfile.ddl.err + h5fc_nonexistdset_file.ddl.err + ) set (HDF5_REFERENCE_TEST_FILES h5fc_non_v3.h5 h5fc_edge_v3.h5 @@ -78,6 +82,10 @@ HDFTEST_COPY_FILE("${HDF5_TOOLS_TEST_H5FC_SOURCE_DIR}/testfiles/${ddl_file}" "${PROJECT_BINARY_DIR}/testfiles/${ddl_file}" "h5fc_files") endforeach () + foreach (h5_file ${HDF5_REFERENCE_ERR_FILES}) + HDFTEST_COPY_FILE("${HDF5_TOOLS_TEST_H5FC_SOURCE_DIR}/testfiles/${h5_file}" "${PROJECT_BINARY_DIR}/testfiles/${h5_file}" "h5fc_files") + endforeach () + foreach (h5_file ${HDF5_REFERENCE_TEST_FILES}) HDFTEST_COPY_FILE("${HDF5_TOOLS_TEST_H5FC_SOURCE_DIR}/testfiles/${h5_file}" "${PROJECT_BINARY_DIR}/testfiles/${h5_file}" "h5fc_files") endforeach () @@ -119,6 +127,7 @@ -D "TEST_OUTPUT=${testname}.out" -D "TEST_EXPECT=${resultcode}" -D "TEST_REFERENCE=${resultfile}" + -D "TEST_ERRREF=${resultfile}.err" -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" ) set_tests_properties (H5FC-${testname}-${testfile} PROPERTIES DEPENDS "H5FC-${testname}-${testfile}-tmpfile") @@ -141,6 +150,42 @@ endif () endmacro () + macro (ADD_H5_NOERR_OUTPUT testname resultfile resultcode testfile) + # If using memchecker add tests without using scripts + if (NOT HDF5_ENABLE_USING_MEMCHECKER) + add_test ( + NAME H5FC-${testname}-clear-objects + COMMAND ${CMAKE_COMMAND} + -E remove + ./testfiles/outtmp.h5 + ./testfiles/${testname}.out + ./testfiles/${testname}.out.err + ) + if (NOT "${last_test}" STREQUAL "") + set_tests_properties (H5FC-${testname}-clear-objects PROPERTIES DEPENDS ${last_test}) + endif () + add_test ( + NAME H5FC-${testname}-${testfile}-tmpfile + COMMAND ${CMAKE_COMMAND} + -E copy_if_different ${HDF5_TOOLS_TEST_H5FC_SOURCE_DIR}/testfiles/${testfile} ./testfiles/outtmp.h5 + ) + set_tests_properties (H5FC-${testname}-${testfile}-tmpfile PROPERTIES DEPENDS "H5FC-${testname}-clear-objects") + add_test ( + NAME H5FC-${testname}-${testfile} + COMMAND "${CMAKE_COMMAND}" + -D "TEST_PROGRAM=$<TARGET_FILE:h5format_convert>" + -D "TEST_ARGS=${ARGN};outtmp.h5" + -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles" + -D "TEST_OUTPUT=${testname}.out" + -D "TEST_EXPECT=${resultcode}" + -D "TEST_REFERENCE=${resultfile}" + -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" + ) + set_tests_properties (H5FC-${testname}-${testfile} PROPERTIES DEPENDS "H5FC-${testname}-${testfile}-tmpfile") + set (last_test "H5FC-${testname}-${testfile}") + endif () + endmacro () + macro (ADD_H5_MASK_OUTPUT testname resultfile resultcode testfile) # If using memchecker add tests without using scripts if (NOT HDF5_ENABLE_USING_MEMCHECKER) @@ -433,17 +478,17 @@ # h5format_convert -d /GROUP/DSET_BT2 --verbose old_h5fc_ext_none.h5 (verbose, bt1 dataset) # h5format_convert -d /DSET_NDATA_BT2 -v -n old_h5fc_ext_none.h5 (verbose, noop, bt1+nodata dataset) # h5format_convert -v old_h5fc_ext_none.h5 (verbose, all datasets) - ADD_H5_OUTPUT (h5fc_v_non_chunked h5fc_v_non_chunked.ddl 0 old_h5fc_ext_none.h5 -d /DSET_CONTIGUOUS -v) - ADD_H5_OUTPUT (h5fc_v_bt1 h5fc_v_bt1.ddl 0 old_h5fc_ext_none.h5 -d /GROUP/DSET_BT2 --verbose) - ADD_H5_OUTPUT (h5fc_v_ndata_bt1 h5fc_v_ndata_bt1.ddl 0 old_h5fc_ext_none.h5 -d /DSET_NDATA_BT2 -v -n) - ADD_H5_OUTPUT (h5fc_v_all h5fc_v_all.ddl 0 old_h5fc_ext_none.h5 -v) + ADD_H5_NOERR_OUTPUT (h5fc_v_non_chunked h5fc_v_non_chunked.ddl 0 old_h5fc_ext_none.h5 -d /DSET_CONTIGUOUS -v) + ADD_H5_NOERR_OUTPUT (h5fc_v_bt1 h5fc_v_bt1.ddl 0 old_h5fc_ext_none.h5 -d /GROUP/DSET_BT2 --verbose) + ADD_H5_NOERR_OUTPUT (h5fc_v_ndata_bt1 h5fc_v_ndata_bt1.ddl 0 old_h5fc_ext_none.h5 -d /DSET_NDATA_BT2 -v -n) + ADD_H5_NOERR_OUTPUT (h5fc_v_all h5fc_v_all.ddl 0 old_h5fc_ext_none.h5 -v) # # # # h5format_convert -d /DSET_EA -v -n h5fc_ext_none.h5 (verbose, noop, one ea dataset) # h5format_convert -v -n h5fc_non_v3.h5 (verbose, noop, all datasets) - ADD_H5_OUTPUT (h5fc_v_n_1d h5fc_v_n_1d.ddl 0 h5fc_ext_none.h5 -d /DSET_EA -v -n) - ADD_H5_OUTPUT (h5fc_v_n_all h5fc_v_n_all.ddl 0 h5fc_non_v3.h5 -v -n) + ADD_H5_NOERR_OUTPUT (h5fc_v_n_1d h5fc_v_n_1d.ddl 0 h5fc_ext_none.h5 -d /DSET_EA -v -n) + ADD_H5_NOERR_OUTPUT (h5fc_v_n_all h5fc_v_n_all.ddl 0 h5fc_non_v3.h5 -v -n) # # # diff --git a/tools/test/h5format_convert/testfiles/h5fc_d_file-d.ddl b/tools/test/h5format_convert/testfiles/h5fc_d_file-d.ddl new file mode 100644 index 0000000..bc0229c --- /dev/null +++ b/tools/test/h5format_convert/testfiles/h5fc_d_file-d.ddl @@ -0,0 +1,25 @@ +usage: h5format_convert [OPTIONS] file_name + OPTIONS + -h, --help Print a usage message and exit + -V, --version Print version number and exit + -v, --verbose Turn on verbose mode + -d dname, --dname=dataset_name Pathname for the dataset + -n, --noop Perform all the steps except the actual conversion + +Examples of use: + +h5format_convert -d /group/dataset file_name + Convert the dataset </group/dataset> in the HDF5 file <file_name>: + a. chunked dataset: convert the chunk indexing type to version 1 B-tree + b. compact/contiguous dataset: downgrade the layout version to 3 + c. virtual dataset: no action + +h5format_convert file_name + Convert all datasets in the HDF5 file <file_name>: + a. chunked dataset: convert the chunk indexing type to version 1 B-tree + b. compact/contiguous dataset: downgrade the layout version to 3 + c. virtual dataset: no action + +h5format_convert -n -d /group/dataset file_name + Go through all the steps except the actual conversion when + converting the dataset </group/dataset> in the HDF5 file <file_name>. diff --git a/tools/test/h5format_convert/testfiles/h5fc_d_file.ddl b/tools/test/h5format_convert/testfiles/h5fc_d_file.ddl index 38fc432..bc0229c 100644 --- a/tools/test/h5format_convert/testfiles/h5fc_d_file.ddl +++ b/tools/test/h5format_convert/testfiles/h5fc_d_file.ddl @@ -23,4 +23,3 @@ h5format_convert file_name h5format_convert -n -d /group/dataset file_name Go through all the steps except the actual conversion when converting the dataset </group/dataset> in the HDF5 file <file_name>. -h5format_convert error: missing file name diff --git a/tools/test/h5format_convert/testfiles/h5fc_d_file.ddl.err b/tools/test/h5format_convert/testfiles/h5fc_d_file.ddl.err new file mode 100644 index 0000000..ceb0fe4 --- /dev/null +++ b/tools/test/h5format_convert/testfiles/h5fc_d_file.ddl.err @@ -0,0 +1 @@ +h5format_convert error: missing file name diff --git a/tools/test/h5format_convert/testfiles/h5fc_dname.ddl b/tools/test/h5format_convert/testfiles/h5fc_dname.ddl index 48564b7..bc0229c 100644 --- a/tools/test/h5format_convert/testfiles/h5fc_dname.ddl +++ b/tools/test/h5format_convert/testfiles/h5fc_dname.ddl @@ -23,4 +23,3 @@ h5format_convert file_name h5format_convert -n -d /group/dataset file_name Go through all the steps except the actual conversion when converting the dataset </group/dataset> in the HDF5 file <file_name>. -h5format_convert error: No dataset name diff --git a/tools/test/h5format_convert/testfiles/h5fc_dname.err b/tools/test/h5format_convert/testfiles/h5fc_dname.err new file mode 100644 index 0000000..361d8a9 --- /dev/null +++ b/tools/test/h5format_convert/testfiles/h5fc_dname.err @@ -0,0 +1 @@ +h5format_convert error: No dataset name diff --git a/tools/test/h5format_convert/testfiles/h5fc_nonexistdset_file.ddl b/tools/test/h5format_convert/testfiles/h5fc_nonexistdset_file.ddl.err index 39450c0..39450c0 100644 --- a/tools/test/h5format_convert/testfiles/h5fc_nonexistdset_file.ddl +++ b/tools/test/h5format_convert/testfiles/h5fc_nonexistdset_file.ddl.err diff --git a/tools/test/h5format_convert/testfiles/h5fc_nonexistfile.ddl b/tools/test/h5format_convert/testfiles/h5fc_nonexistfile.ddl.err index 706ea9d..706ea9d 100644 --- a/tools/test/h5format_convert/testfiles/h5fc_nonexistfile.ddl +++ b/tools/test/h5format_convert/testfiles/h5fc_nonexistfile.ddl.err diff --git a/tools/test/h5format_convert/testh5fc.sh.in b/tools/test/h5format_convert/testh5fc.sh.in index 585d389..2cdd445 100644 --- a/tools/test/h5format_convert/testh5fc.sh.in +++ b/tools/test/h5format_convert/testh5fc.sh.in @@ -103,13 +103,18 @@ $SRC_H5FORMCONV_TESTFILES/old_h5fc_ext3_isf.h5 $SRC_H5FORMCONV_TESTFILES/h5fc_err_level.h5 " +LIST_ERR_TEST_FILES=" +$SRC_H5FORMCONV_TESTFILES/h5fc_d_file.ddl.err +$SRC_H5FORMCONV_TESTFILES/h5fc_dname.err +$SRC_H5FORMCONV_TESTFILES/h5fc_nonexistfile.ddl.err +$SRC_H5FORMCONV_TESTFILES/h5fc_nonexistdset_file.ddl.err +" + LIST_OTHER_TEST_FILES=" $SRC_H5FORMCONV_TESTFILES/h5fc_help.ddl $SRC_H5FORMCONV_TESTFILES/h5fc_nooption.ddl -$SRC_H5FORMCONV_TESTFILES/h5fc_nonexistfile.ddl $SRC_H5FORMCONV_TESTFILES/h5fc_d_file.ddl $SRC_H5FORMCONV_TESTFILES/h5fc_dname.ddl -$SRC_H5FORMCONV_TESTFILES/h5fc_nonexistdset_file.ddl $SRC_H5FORMCONV_TESTFILES/h5fc_v_non_chunked.ddl $SRC_H5FORMCONV_TESTFILES/h5fc_v_bt1.ddl $SRC_H5FORMCONV_TESTFILES/h5fc_v_ndata_bt1.ddl @@ -137,7 +142,7 @@ $SRC_H5FORMCONV_TESTFILES/h5fc_v_err.ddl.err # # copy test files and expected output files from source dirs to test dir # -COPY_TESTFILES="$LIST_HDF5_TEST_FILES $LIST_OTHER_TEST_FILES" +COPY_TESTFILES="$LIST_HDF5_TEST_FILES $LIST_ERR_TEST_FILES $LIST_OTHER_TEST_FILES" COPY_TESTFILES_TO_TESTDIR() { @@ -193,6 +198,9 @@ TESTING() { echo "Testing $* $SPACES" | cut -c1-80 | tr -d '\012' } +# Source in the output filter function definitions. +. $srcdir/../../../bin/output_filter.sh + # Run a test and print PASS or *FAIL*. If a test fails then increment # the `nerrors' global variable and (if $verbose is set) display the # difference between the actual output and the expected output. The @@ -212,8 +220,9 @@ TESTING() { TOOLTEST_OUT() { # Prepare expected and actual output expect="$TESTDIR/$1" + expect_err="$TESTDIR/`basename $1 .ddl`.err" actual="$TESTDIR/`basename $1 .ddl`.out" - actual_err="$TESTDIR/`basename $1 .ddl`.err" + actual_err="$TESTDIR/`basename $1 .ddl`.out.err" actual_sav=${actual}-sav actual_err_sav=${actual_err}-sav @@ -233,7 +242,6 @@ TOOLTEST_OUT() { ) >$actual 2>$actual_err cp $actual $actual_sav cp $actual_err $actual_err_sav - cat $actual_err >> $actual # Compare output COMPARE_OUT $expect $actual @@ -251,7 +259,7 @@ TOOLTEST_MASK_OUT() { expect_err="$TESTDIR/$1.err" actual_ext="$TESTDIR/$1.ext" actual="$TESTDIR/`basename $1 .ddl`.out" - actual_err="$TESTDIR/`basename $1 .ddl`.err" + actual_err="$TESTDIR/`basename $1 .ddl`.out.err" actual_sav=${actual}-sav actual_err_sav=${actual_err}-sav @@ -305,6 +313,42 @@ TOOLTEST_MASK_OUT() { $RM $actual $actual_err $actual_sav $actual_err_sav fi } +# Same as TOOLTEST_OUT except only compares error outout +TOOLTEST_ERR() { + # Prepare expected and actual output + expect="$TESTDIR/$1" + expect_err="$TESTDIR/$1.err" + actual="$TESTDIR/`basename $1 .ddl`.out" + actual_err="$TESTDIR/`basename $1 .ddl`.out.err" + actual_sav=${actual}-sav + actual_err_sav=${actual_err}-sav + + # Prepare the test file + $RM $TESTDIR/$TMPOUTFILE + TFILE=$2 + if [ ! -z "$2" ] && [ -e $TESTDIR/$2 ] ; then + $CP $TESTDIR/$2 $TESTDIR/$TMPOUTFILE + TFILE=$TMPOUTFILE + fi + + # Run test. + TESTING $FORMCONV $3 $4 $5 $6 $2 + ( + cd $TESTDIR + $RUNSERIAL $FORMCONV_BIN $3 $4 $5 $6 $TFILE + ) >$actual 2>$actual_err + cp $actual $actual_sav + cp $actual_err $actual_err_sav + + # Compare output + COMPARE_OUT $expect_err $actual_err + + # Clean up output file + if test -z "$HDF5_NOCLEANUP"; then + $RM $actual $actual_err + $RM $actual $actual_err $actual_sav $actual_err_sav + fi +} # To check that the tool exits success, no output # Assume all short options @@ -406,7 +450,7 @@ COPY_TESTFILES_TO_TESTDIR # h5format_convert nonexist.h5 (no options, file does not exist) TOOLTEST_OUT h5fc_help.ddl '' --help TOOLTEST_OUT h5fc_nooption.ddl '' -TOOLTEST_OUT h5fc_nonexistfile.ddl nonexist.h5 +TOOLTEST_ERR h5fc_nonexistfile.ddl nonexist.h5 # # # h5format_convert -d old_h5fc_ext_none.h5 (just -d option, file exists) @@ -416,7 +460,7 @@ TOOLTEST_OUT h5fc_nonexistfile.ddl nonexist.h5 TOOLTEST_OUT h5fc_d_file.ddl old_h5fc_ext_none.h5 -d TOOLTEST_OUT h5fc_d_file.ddl old_h5fc_ext_none.h5 --dname TOOLTEST_OUT h5fc_dname.ddl '' --dname -TOOLTEST_OUT h5fc_nonexistdset_file.ddl old_h5fc_ext_none.h5 --dname=nonexist +TOOLTEST_ERR h5fc_nonexistdset_file.ddl old_h5fc_ext_none.h5 --dname=nonexist # # # diff --git a/tools/test/h5jam/CMakeTests.cmake b/tools/test/h5jam/CMakeTests.cmake index 66ff715..2d00b86 100644 --- a/tools/test/h5jam/CMakeTests.cmake +++ b/tools/test/h5jam/CMakeTests.cmake @@ -74,6 +74,8 @@ -D "TEST_FOLDER=${PROJECT_BINARY_DIR}" -D "TEST_OUTPUT=${expectfile}.out" -D "TEST_EXPECT=${resultcode}" + -D "TEST_ERRREF=testfiles/${expectfile}.txt" + -D "TEST_SKIP_COMPARE=1" -D "TEST_REFERENCE=testfiles/${expectfile}.txt" -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" ) diff --git a/tools/test/h5jam/tellub.c b/tools/test/h5jam/tellub.c index 26c725d..aa779b3 100644 --- a/tools/test/h5jam/tellub.c +++ b/tools/test/h5jam/tellub.c @@ -104,7 +104,7 @@ main (int argc, const char *argv[]) hsize_t usize; htri_t testval; herr_t status; - hid_t plist = -1; + hid_t plist = H5I_INVALID_HID; h5tools_setprogname(PROGRAMNAME); h5tools_setstatus(EXIT_SUCCESS); diff --git a/tools/test/h5ls/CMakeTests.cmake b/tools/test/h5ls/CMakeTests.cmake index 488b271..116d097 100644 --- a/tools/test/h5ls/CMakeTests.cmake +++ b/tools/test/h5ls/CMakeTests.cmake @@ -47,6 +47,12 @@ ${HDF5_TOOLS_DIR}/testfiles/tdset_idx.h5 ) + set (LIST_ERR_TEST_FILES + ${HDF5_TOOLS_DIR}/test/h5ls/errfiles/nosuchfile.err + ${HDF5_TOOLS_DIR}/test/h5ls/errfiles/textlinksrc-nodangle-1.err + ${HDF5_TOOLS_DIR}/test/h5ls/errfiles/tgroup-1.err + ) + set (LIST_OTHER_TEST_FILES ${HDF5_TOOLS_DIR}/testfiles/help-1.ls ${HDF5_TOOLS_DIR}/testfiles/help-2.ls @@ -116,6 +122,10 @@ get_filename_component(fname "${listfiles}" NAME) HDFTEST_COPY_FILE("${listfiles}" "${PROJECT_BINARY_DIR}/testfiles/${fname}" "h5ls_files") endforeach () + foreach (listfiles ${LIST_ERR_TEST_FILES}) + get_filename_component(fname "${listfiles}" NAME) + HDFTEST_COPY_FILE("${listfiles}" "${PROJECT_BINARY_DIR}/testfiles/${fname}" "h5ls_files") + endforeach () add_custom_target(h5ls_files ALL COMMENT "Copying files needed by h5ls tests" DEPENDS ${h5ls_files_list}) ############################################################################## @@ -159,6 +169,42 @@ endif () endmacro () + macro (ADD_H5_ERR_TEST resultfile resultcode) + # If using memchecker add tests without using scripts + if (HDF5_ENABLE_USING_MEMCHECKER) + add_test (NAME H5LS-${resultfile} COMMAND $<TARGET_FILE:h5ls> ${ARGN}) + set_tests_properties (H5LS-${resultfile} PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles") + if ("${resultcode}" STREQUAL "1") + set_tests_properties (H5LS-${resultfile} PROPERTIES WILL_FAIL "true") + endif () + if (NOT "${last_test}" STREQUAL "") + set_tests_properties (H5LS-${resultfile} PROPERTIES DEPENDS ${last_test}) + endif () + else () + # Remove any output file left over from previous test run + add_test ( + NAME H5LS-${resultfile}-clear-objects + COMMAND ${CMAKE_COMMAND} + -E remove + testfiles/${resultfile}.out + testfiles/${resultfile}.out.err + ) + add_test ( + NAME H5LS-${resultfile} + COMMAND "${CMAKE_COMMAND}" + -D "TEST_PROGRAM=$<TARGET_FILE:h5ls>" + -D "TEST_ARGS=${ARGN}" + -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles" + -D "TEST_OUTPUT=${resultfile}.out" + -D "TEST_EXPECT=${resultcode}" + -D "TEST_REFERENCE=${resultfile}.ls" + -D "TEST_ERRREF=${resultfile}.err" + -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" + ) + set_tests_properties (H5LS-${resultfile} PROPERTIES DEPENDS H5LS-${resultfile}-clear-objects) + endif () + endmacro () + macro (ADD_H5_UD_TEST testname resultcode resultfile) if (NOT HDF5_ENABLE_USING_MEMCHECKER) # Remove any output file left over from previous test run @@ -341,7 +387,7 @@ # test for displaying groups # The following combination of arguments is expected to return an error message # and return value 1 - ADD_H5_TEST (tgroup-1 1 -w80 -r -g tgroup.h5) + ADD_H5_ERR_TEST (tgroup-1 1 -w80 -r -g tgroup.h5) ADD_H5_TEST (tgroup-2 0 -w80 -g tgroup.h5/g1) # test for files with groups that have long comments @@ -382,7 +428,7 @@ # tests for no-dangling-links # if this option is given on dangling link, h5ls should return exit code 1 # when used alone , expect to print out help and return exit code 1 - ADD_H5_TEST (textlinksrc-nodangle-1 1 -w80 --no-dangling-links textlinksrc.h5) + ADD_H5_ERR_TEST (textlinksrc-nodangle-1 1 -w80 --no-dangling-links textlinksrc.h5) # external dangling link - expected exit code 1 ADD_H5_TEST (textlinksrc-nodangle-2 1 -w80 --follow-symlinks --no-dangling-links textlinksrc.h5) # soft dangling link - expected exit code 1 @@ -444,7 +490,7 @@ endif () # test for non-existing file - ADD_H5_TEST (nosuchfile 1 nosuchfile.h5) + ADD_H5_ERR_TEST (nosuchfile 1 nosuchfile.h5) # test for variable length data types in verbose mode if (H5_WORDS_BIGENDIAN) diff --git a/tools/test/h5ls/errfiles/nosuchfile.err b/tools/test/h5ls/errfiles/nosuchfile.err new file mode 100644 index 0000000..8c4ee42 --- /dev/null +++ b/tools/test/h5ls/errfiles/nosuchfile.err @@ -0,0 +1 @@ +nosuchfile.h5: unable to open file diff --git a/tools/test/h5ls/errfiles/textlinksrc-nodangle-1.err b/tools/test/h5ls/errfiles/textlinksrc-nodangle-1.err new file mode 100644 index 0000000..8991fc1 --- /dev/null +++ b/tools/test/h5ls/errfiles/textlinksrc-nodangle-1.err @@ -0,0 +1,2 @@ +Error: --no-dangling-links must be used along with --follow-symlinks option! + diff --git a/tools/test/h5ls/errfiles/tgroup-1.err b/tools/test/h5ls/errfiles/tgroup-1.err new file mode 100644 index 0000000..ba4cf07 --- /dev/null +++ b/tools/test/h5ls/errfiles/tgroup-1.err @@ -0,0 +1,2 @@ +Error: 'recursive' option not compatible with 'group info' option! + diff --git a/tools/test/h5ls/testh5ls.sh.in b/tools/test/h5ls/testh5ls.sh.in index 8c6551b..353f1bb 100644 --- a/tools/test/h5ls/testh5ls.sh.in +++ b/tools/test/h5ls/testh5ls.sh.in @@ -53,6 +53,7 @@ SRC_H5REPACK_TESTFILES="$SRC_TOOLS/test/h5repack/testfiles" SRC_H5JAM_TESTFILES="$SRC_TOOLS/test/h5jam/testfiles" SRC_H5STAT_TESTFILES="$SRC_TOOLS/test/h5stat/testfiles" SRC_H5IMPORT_TESTFILES="$SRC_TOOLS/test/h5import/testfiles" +SRC_H5LS_ERRFILES="$SRC_TOOLS/test/h5ls/errfiles" TESTDIR=./testfiles test -d $TESTDIR || mkdir $TESTDIR @@ -93,6 +94,12 @@ $SRC_H5LS_TESTFILES/tvldtypes1.h5 $SRC_H5LS_TESTFILES/tdset_idx.h5 " +LIST_ERROR_TEST_FILES=" +$SRC_H5LS_ERRFILES/nosuchfile.err +$SRC_H5LS_ERRFILES/textlinksrc-nodangle-1.err +$SRC_H5LS_ERRFILES/tgroup-1.err +" + LIST_OTHER_TEST_FILES=" $SRC_H5LS_TESTFILES/help-1.ls $SRC_H5LS_TESTFILES/help-2.ls @@ -228,8 +235,9 @@ TESTING() { # $2 and on -- argument for the h5ls tool TOOLTEST() { expect="$TESTDIR/$1" + expect_err="$TESTDIR/`basename $1 .ls`.err" actual="$TESTDIR/`basename $1 .ls`.out" - actual_err="$TESTDIR/`basename $1 .ls`.err" + actual_err="$TESTDIR/`basename $1 .ls`.out.err" actual_sav=${actual}-sav actual_err_sav=${actual_err}-sav shift @@ -251,7 +259,6 @@ TOOLTEST() { STDOUT_FILTER $actual cp $actual_err $actual_err_sav STDERR_FILTER $actual_err - cat $actual_err >> $actual if [ $h5haveexitcode = 'yes' -a $exitcode -ne $retvalexpect ]; then echo "*FAILED*" nerrors="`expr $nerrors + 1`" diff --git a/tools/test/h5repack/CMakeTests.cmake b/tools/test/h5repack/CMakeTests.cmake index 3ee5e27..ad468f0 100644 --- a/tools/test/h5repack/CMakeTests.cmake +++ b/tools/test/h5repack/CMakeTests.cmake @@ -377,7 +377,8 @@ -D "TEST_OUTPUT=${resultfile}-${testname}.out" -D "TEST_EXPECT=${resultcode}" -D "TEST_MASK_ERROR=true" - -D "TEST_REFERENCE=${resultfile}-${testname}.tst" + -D "TEST_REFERENCE=${resultfile}.mty" + -D "TEST_ERRREF=${resultfile}-${testname}.tst" -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" ) set_tests_properties (H5REPACK_MASK-${testname} PROPERTIES DEPENDS H5REPACK_MASK-${testname}-clear-objects) diff --git a/tools/test/h5stat/CMakeTests.cmake b/tools/test/h5stat/CMakeTests.cmake index bd55ac1..ec8c9b1 100644 --- a/tools/test/h5stat/CMakeTests.cmake +++ b/tools/test/h5stat/CMakeTests.cmake @@ -39,23 +39,30 @@ h5stat_newgrat h5stat_newgrat-UG h5stat_newgrat-UA - h5stat_err1_links h5stat_idx h5stat_links1 h5stat_links2 h5stat_links3 h5stat_links4 h5stat_links5 - h5stat_err1_dims h5stat_dims1 h5stat_dims2 - h5stat_err1_numattrs - h5stat_err2_numattrs h5stat_numattrs1 h5stat_numattrs2 h5stat_numattrs3 h5stat_numattrs4 ) + set (HDF5_REFERENCE_ERR_FILES + h5stat_err_refcount + h5stat_err_old_layout + h5stat_err_old_fill + h5stat_err1_dims + h5stat_err1_links + h5stat_err1_numattrs + h5stat_err2_numattrs + h5stat_notexist + h5stat_nofile + ) set (HDF5_REFERENCE_TEST_FILES h5stat_err_refcount.h5 h5stat_err_old_layout.h5 @@ -71,6 +78,10 @@ HDFTEST_COPY_FILE("${HDF5_TOOLS_TEST_H5STAT_SOURCE_DIR}/testfiles/${ddl_file}.ddl" "${PROJECT_BINARY_DIR}/${ddl_file}.ddl" "h5stat_files") endforeach () + foreach (h5_file ${HDF5_REFERENCE_ERR_FILES}) + HDFTEST_COPY_FILE("${HDF5_TOOLS_TEST_H5STAT_SOURCE_DIR}/testfiles/${h5_file}.err" "${PROJECT_BINARY_DIR}/${h5_file}.err" "h5stat_files") + endforeach () + foreach (h5_file ${HDF5_REFERENCE_TEST_FILES}) HDFTEST_COPY_FILE("${HDF5_TOOLS_TEST_H5STAT_SOURCE_DIR}/testfiles/${h5_file}" "${PROJECT_BINARY_DIR}/${h5_file}" "h5stat_files") endforeach () @@ -118,6 +129,43 @@ endif () endmacro () + macro (ADD_H5_ERR_TEST resultfile resultcode) + # If using memchecker add tests without using scripts + if (HDF5_ENABLE_USING_MEMCHECKER) + add_test (NAME H5STAT-${resultfile} COMMAND $<TARGET_FILE:h5stat> ${ARGN}) + if (NOT "${resultcode}" STREQUAL "0") + set_tests_properties (H5STAT-${resultfile} PROPERTIES WILL_FAIL "true") + endif () + if (NOT "${last_test}" STREQUAL "") + set_tests_properties (H5STAT-${resultfile} PROPERTIES DEPENDS ${last_test}) + endif () + else (HDF5_ENABLE_USING_MEMCHECKER) + add_test ( + NAME H5STAT-${resultfile}-clear-objects + COMMAND ${CMAKE_COMMAND} + -E remove + ${resultfile}.out + ${resultfile}.out.err + ) + if (NOT "${last_test}" STREQUAL "") + set_tests_properties (H5STAT-${resultfile}-clear-objects PROPERTIES DEPENDS ${last_test}) + endif () + add_test ( + NAME H5STAT-${resultfile} + COMMAND "${CMAKE_COMMAND}" + -D "TEST_PROGRAM=$<TARGET_FILE:h5stat>" + -D "TEST_ARGS=${ARGN}" + -D "TEST_FOLDER=${PROJECT_BINARY_DIR}" + -D "TEST_OUTPUT=${resultfile}.out" + -D "TEST_EXPECT=${resultcode}" + -D "TEST_REFERENCE=${resultfile}.mty" + -D "TEST_ERRREF=${resultfile}.err" + -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" + ) + set_tests_properties (H5STAT-${resultfile} PROPERTIES DEPENDS H5STAT-${resultfile}-clear-objects) + endif () + endmacro () + ############################################################################## ############################################################################## ### T H E T E S T S ### @@ -173,7 +221,7 @@ # -g -l 8 # --links=8 # --links=20 -g - ADD_H5_TEST (h5stat_err1_links 1 -l 0 h5stat_threshold.h5) + ADD_H5_ERR_TEST (h5stat_err1_links 1 -l 0 h5stat_threshold.h5) ADD_H5_TEST (h5stat_links1 0 -g -l 8 h5stat_threshold.h5) ADD_H5_TEST (h5stat_links2 0 --links=8 h5stat_threshold.h5) ADD_H5_TEST (h5stat_links3 0 --links=20 -g h5stat_threshold.h5) @@ -188,7 +236,7 @@ # -d --dims=-1 (incorrect threshold value) # -gd -m 5 # -d --di=15 - ADD_H5_TEST (h5stat_err1_dims 1 -d --dims=-1 h5stat_threshold.h5) + ADD_H5_ERR_TEST (h5stat_err1_dims 1 -d --dims=-1 h5stat_threshold.h5) ADD_H5_TEST (h5stat_dims1 0 -gd -m 5 h5stat_threshold.h5) ADD_H5_TEST (h5stat_dims2 0 -d --di=15 h5stat_threshold.h5) # @@ -198,8 +246,8 @@ # -AS -a 10 # -a 1 # -A --numattrs=25 - ADD_H5_TEST (h5stat_err1_numattrs 1 -a -2 h5stat_threshold.h5) - ADD_H5_TEST (h5stat_err2_numattrs 1 --numattrs h5stat_threshold.h5) + ADD_H5_ERR_TEST (h5stat_err1_numattrs 1 -a -2 h5stat_threshold.h5) + ADD_H5_ERR_TEST (h5stat_err2_numattrs 1 --numattrs h5stat_threshold.h5) ADD_H5_TEST (h5stat_numattrs1 0 -AS -a 10 h5stat_threshold.h5) ADD_H5_TEST (h5stat_numattrs2 0 -a 1 h5stat_threshold.h5) ADD_H5_TEST (h5stat_numattrs3 0 -A --numattrs=25 h5stat_threshold.h5) diff --git a/tools/test/h5stat/testfiles/h5stat_err1_dims.ddl b/tools/test/h5stat/testfiles/h5stat_err1_dims.err index 86d375b..86d375b 100644 --- a/tools/test/h5stat/testfiles/h5stat_err1_dims.ddl +++ b/tools/test/h5stat/testfiles/h5stat_err1_dims.err diff --git a/tools/test/h5stat/testfiles/h5stat_err1_links.ddl b/tools/test/h5stat/testfiles/h5stat_err1_links.err index d43207c..d43207c 100644 --- a/tools/test/h5stat/testfiles/h5stat_err1_links.ddl +++ b/tools/test/h5stat/testfiles/h5stat_err1_links.err diff --git a/tools/test/h5stat/testfiles/h5stat_err2_numattrs.ddl b/tools/test/h5stat/testfiles/h5stat_err1_numattrs.err index 01b6c18..01b6c18 100644 --- a/tools/test/h5stat/testfiles/h5stat_err2_numattrs.ddl +++ b/tools/test/h5stat/testfiles/h5stat_err1_numattrs.err diff --git a/tools/test/h5stat/testfiles/h5stat_err1_numattrs.ddl b/tools/test/h5stat/testfiles/h5stat_err2_numattrs.err index 01b6c18..01b6c18 100644 --- a/tools/test/h5stat/testfiles/h5stat_err1_numattrs.ddl +++ b/tools/test/h5stat/testfiles/h5stat_err2_numattrs.err diff --git a/tools/test/h5stat/testfiles/h5stat_err_old_fill.ddl b/tools/test/h5stat/testfiles/h5stat_err_old_fill.ddl index e751b7f..5cc1e32 100644 --- a/tools/test/h5stat/testfiles/h5stat_err_old_fill.ddl +++ b/tools/test/h5stat/testfiles/h5stat_err_old_fill.ddl @@ -1,2 +1 @@ Filename: h5stat_err_old_fill.h5 -h5stat error: unable to traverse objects/links in file "h5stat_err_old_fill.h5" diff --git a/tools/test/h5stat/testfiles/h5stat_err_old_fill.err b/tools/test/h5stat/testfiles/h5stat_err_old_fill.err new file mode 100644 index 0000000..8b886d2 --- /dev/null +++ b/tools/test/h5stat/testfiles/h5stat_err_old_fill.err @@ -0,0 +1 @@ +h5stat error: unable to traverse objects/links in file "h5stat_err_old_fill.h5" diff --git a/tools/test/h5stat/testfiles/h5stat_err_old_layout.ddl b/tools/test/h5stat/testfiles/h5stat_err_old_layout.ddl index a3e27e2..112190c 100644 --- a/tools/test/h5stat/testfiles/h5stat_err_old_layout.ddl +++ b/tools/test/h5stat/testfiles/h5stat_err_old_layout.ddl @@ -1,2 +1 @@ Filename: h5stat_err_old_layout.h5 -h5stat error: unable to traverse objects/links in file "h5stat_err_old_layout.h5" diff --git a/tools/test/h5stat/testfiles/h5stat_err_old_layout.err b/tools/test/h5stat/testfiles/h5stat_err_old_layout.err new file mode 100644 index 0000000..7aa2fa7 --- /dev/null +++ b/tools/test/h5stat/testfiles/h5stat_err_old_layout.err @@ -0,0 +1 @@ +h5stat error: unable to traverse objects/links in file "h5stat_err_old_layout.h5" diff --git a/tools/test/h5stat/testfiles/h5stat_err_refcount.ddl b/tools/test/h5stat/testfiles/h5stat_err_refcount.ddl index 1f1b491..41e533e 100644 --- a/tools/test/h5stat/testfiles/h5stat_err_refcount.ddl +++ b/tools/test/h5stat/testfiles/h5stat_err_refcount.ddl @@ -1,2 +1 @@ Filename: h5stat_err_refcount.h5 -h5stat error: unable to traverse objects/links in file "h5stat_err_refcount.h5" diff --git a/tools/test/h5stat/testfiles/h5stat_err_refcount.err b/tools/test/h5stat/testfiles/h5stat_err_refcount.err new file mode 100644 index 0000000..d176996 --- /dev/null +++ b/tools/test/h5stat/testfiles/h5stat_err_refcount.err @@ -0,0 +1 @@ +h5stat error: unable to traverse objects/links in file "h5stat_err_refcount.h5" diff --git a/tools/test/h5stat/testfiles/h5stat_nofile.ddl b/tools/test/h5stat/testfiles/h5stat_nofile.ddl index 7171320..01e39af 100644 --- a/tools/test/h5stat/testfiles/h5stat_nofile.ddl +++ b/tools/test/h5stat/testfiles/h5stat_nofile.ddl @@ -23,4 +23,3 @@ Usage: h5stat [OPTIONS] file -s, --freespace Print free space information -S, --summary Print summary of file space information --enable-error-stack Prints messages from the HDF5 error stack as they occur -h5stat error: missing file name diff --git a/tools/test/h5stat/testfiles/h5stat_nofile.err b/tools/test/h5stat/testfiles/h5stat_nofile.err new file mode 100644 index 0000000..3b7e979 --- /dev/null +++ b/tools/test/h5stat/testfiles/h5stat_nofile.err @@ -0,0 +1 @@ +h5stat error: missing file name diff --git a/tools/test/h5stat/testfiles/h5stat_notexist.ddl b/tools/test/h5stat/testfiles/h5stat_notexist.ddl index cc25e43..7f71941 100644 --- a/tools/test/h5stat/testfiles/h5stat_notexist.ddl +++ b/tools/test/h5stat/testfiles/h5stat_notexist.ddl @@ -1,2 +1 @@ Filename: notexist.h5 -h5stat error: unable to open file "notexist.h5" diff --git a/tools/test/h5stat/testfiles/h5stat_notexist.err b/tools/test/h5stat/testfiles/h5stat_notexist.err new file mode 100644 index 0000000..c1d9e54 --- /dev/null +++ b/tools/test/h5stat/testfiles/h5stat_notexist.err @@ -0,0 +1 @@ +h5stat error: unable to open file "notexist.h5" diff --git a/tools/test/h5stat/testh5stat.sh.in b/tools/test/h5stat/testh5stat.sh.in index 0a5127f..69b856e 100644 --- a/tools/test/h5stat/testh5stat.sh.in +++ b/tools/test/h5stat/testh5stat.sh.in @@ -79,6 +79,18 @@ $SRC_H5STAT_TESTFILES/h5stat_idx.h5 $SRC_H5STAT_TESTFILES/h5stat_threshold.h5 " +LIST_ERR_TEST_FILES=" +$SRC_H5STAT_TESTFILES/h5stat_err_refcount.err +$SRC_H5STAT_TESTFILES/h5stat_err_old_layout.err +$SRC_H5STAT_TESTFILES/h5stat_err_old_fill.err +$SRC_H5STAT_TESTFILES/h5stat_err1_links.err +$SRC_H5STAT_TESTFILES/h5stat_err1_dims.err +$SRC_H5STAT_TESTFILES/h5stat_err1_numattrs.err +$SRC_H5STAT_TESTFILES/h5stat_err2_numattrs.err +$SRC_H5STAT_TESTFILES/h5stat_notexist.err +$SRC_H5STAT_TESTFILES/h5stat_nofile.err +" + LIST_OTHER_TEST_FILES=" $SRC_H5STAT_TESTFILES/h5stat_err_refcount.ddl $SRC_H5STAT_TESTFILES/h5stat_err_old_layout.ddl @@ -100,17 +112,13 @@ $SRC_H5STAT_TESTFILES/h5stat_newgrat.ddl $SRC_H5STAT_TESTFILES/h5stat_newgrat-UG.ddl $SRC_H5STAT_TESTFILES/h5stat_newgrat-UA.ddl $SRC_H5STAT_TESTFILES/h5stat_idx.ddl -$SRC_H5STAT_TESTFILES/h5stat_err1_links.ddl $SRC_H5STAT_TESTFILES/h5stat_links1.ddl $SRC_H5STAT_TESTFILES/h5stat_links2.ddl $SRC_H5STAT_TESTFILES/h5stat_links3.ddl $SRC_H5STAT_TESTFILES/h5stat_links4.ddl $SRC_H5STAT_TESTFILES/h5stat_links5.ddl -$SRC_H5STAT_TESTFILES/h5stat_err1_dims.ddl $SRC_H5STAT_TESTFILES/h5stat_dims1.ddl $SRC_H5STAT_TESTFILES/h5stat_dims2.ddl -$SRC_H5STAT_TESTFILES/h5stat_err1_numattrs.ddl -$SRC_H5STAT_TESTFILES/h5stat_err2_numattrs.ddl $SRC_H5STAT_TESTFILES/h5stat_numattrs1.ddl $SRC_H5STAT_TESTFILES/h5stat_numattrs2.ddl $SRC_H5STAT_TESTFILES/h5stat_numattrs3.ddl @@ -120,7 +128,7 @@ $SRC_H5STAT_TESTFILES/h5stat_numattrs4.ddl # # copy test files and expected output files from source dirs to test dir # -COPY_TESTFILES="$LIST_HDF5_TEST_FILES $LIST_OTHER_TEST_FILES" +COPY_TESTFILES="$LIST_HDF5_TEST_FILES $LIST_ERR_TEST_FILES $LIST_OTHER_TEST_FILES" COPY_TESTFILES_TO_TESTDIR() { @@ -184,8 +192,9 @@ TESTING() { # TOOLTEST() { expect="$TESTDIR/$1" + expect_err="$TESTDIR/`basename $1 .ddl`.err" actual="$TESTDIR/`basename $1 .ddl`.out" - actual_err="$TESTDIR/`basename $1 .ddl`.err" + actual_err="$TESTDIR/`basename $1 .ddl`.out.err" actual_sav=${actual}-sav actual_err_sav=${actual_err}-sav shift @@ -202,14 +211,17 @@ TOOLTEST() { STDOUT_FILTER $actual cp $actual_err $actual_err_sav STDERR_FILTER $actual_err - cat $actual_err >> $actual if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + # Compare error files if the expect file doesn't exist. + if $CMP $expect_err $actual_err; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected result (*.err) differs from actual result (*.out.err)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect_err $actual_err |sed 's/^/ /' + fi elif $CMP $expect $actual; then echo " PASSED" else diff --git a/tools/test/misc/CMakeTestsClear.cmake b/tools/test/misc/CMakeTestsClear.cmake index a51d0e9..c46ac59 100644 --- a/tools/test/misc/CMakeTestsClear.cmake +++ b/tools/test/misc/CMakeTestsClear.cmake @@ -49,8 +49,6 @@ h5clear_missing_file.ddl h5clear_noclose_after_size.ddl h5clear_noclose_before_size.ddl - h5clear_no_mdc_image.ddl - h5clear_open_fail.ddl h5clear_status_noclose_after_size.ddl h5clear_usage.ddl h5clear_user_equal_after_size.ddl @@ -60,10 +58,17 @@ h5clear_user_less_after_size.ddl h5clear_user_less_before_size.ddl ) + set (HDF5_REFERENCE_ERR_FILES + h5clear_no_mdc_image.err + h5clear_open_fail.err + ) foreach (h5_file ${HDF5_TEST_FILES} ${HDF5_SEC2_TEST_FILES} ${HDF5_REFERENCE_TEST_FILES}) HDFTEST_COPY_FILE("${PROJECT_SOURCE_DIR}/testfiles/${h5_file}" "${PROJECT_BINARY_DIR}/testfiles/${h5_file}" "h5clear_files") endforeach () + foreach (h5_file ${HDF5_REFERENCE_ERR_FILES}) + HDFTEST_COPY_FILE("${PROJECT_SOURCE_DIR}/testfiles/${h5_file}" "${PROJECT_BINARY_DIR}/testfiles/${h5_file}" "h5clear_files") + endforeach () # make second copy of h5clear_sec2.h5 foreach (h5_file ${HDF5_SEC2_TEST_FILES}) HDFTEST_COPY_FILE("${PROJECT_SOURCE_DIR}/testfiles/${h5_file}" "${PROJECT_BINARY_DIR}/testfiles/orig_${h5_file}" "h5clear_files") @@ -108,6 +113,35 @@ endif () endmacro () + macro (ADD_H5_ERR_CMP testname resultfile resultcode) + if (NOT HDF5_ENABLE_USING_MEMCHECKER) + add_test ( + NAME H5CLEAR_CMP-${testname}-clear-objects + COMMAND ${CMAKE_COMMAND} + -E remove + testfiles/${testname}.out + testfiles/${testname}.out.err + ) + if (NOT "${last_test}" STREQUAL "") + set_tests_properties (H5CLEAR_CMP-${testname}-clear-objects PROPERTIES DEPENDS ${last_test}) + endif () + add_test ( + NAME H5CLEAR_CMP-${testname} + COMMAND "${CMAKE_COMMAND}" + -D "TEST_PROGRAM=$<TARGET_FILE:h5clear>" + -D "TEST_ARGS:STRING=${ARGN}" + -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles" + -D "TEST_OUTPUT=${testname}.out" + -D "TEST_EXPECT=${resultcode}" + -D "TEST_REFERENCE=${resultfile}.mty" + -D "TEST_ERRREF=${resultfile}.err" + -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" + ) + set_tests_properties (H5CLEAR_CMP-${testname} PROPERTIES DEPENDS H5CLEAR_CMP-${testname}-clear-objects) + set (last_test "H5CLEAR_CMP-${testname}") + endif () + endmacro () + macro (ADD_H5_CMP_WITH_COPY testname resultcode resultfile testfile) if (NOT HDF5_ENABLE_USING_MEMCHECKER) add_test ( @@ -144,6 +178,43 @@ endif () endmacro () + macro (ADD_H5_ERR_CMP_WITH_COPY testname resultcode resultfile testfile) + if (NOT HDF5_ENABLE_USING_MEMCHECKER) + add_test ( + NAME H5CLEAR_CMP-${testname}-clear-objects + COMMAND ${CMAKE_COMMAND} + -E remove + testfiles/${testname}.out + testfiles/${testname}.out.err + testfiles/${testfile} + ) + if (NOT "${last_test}" STREQUAL "") + set_tests_properties (H5CLEAR_CMP-${testname}-clear-objects PROPERTIES DEPENDS ${last_test}) + endif () + add_test ( + NAME H5CLEAR_CMP-copy_${testname} + COMMAND ${CMAKE_COMMAND} + -E copy_if_different + "${PROJECT_SOURCE_DIR}/testfiles/${testfile}" "${PROJECT_BINARY_DIR}/testfiles/${testfile}" + ) + set_tests_properties (H5CLEAR_CMP-copy_${testname} PROPERTIES DEPENDS H5CLEAR_CMP-${testname}-clear-objects) + add_test ( + NAME H5CLEAR_CMP-${testname} + COMMAND "${CMAKE_COMMAND}" + -D "TEST_PROGRAM=$<TARGET_FILE:h5clear>" + -D "TEST_ARGS:STRING=${ARGN};${testfile}" + -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles" + -D "TEST_OUTPUT=${testname}.out" + -D "TEST_EXPECT=${resultcode}" + -D "TEST_REFERENCE=${resultfile}.mty" + -D "TEST_ERRREF=${resultfile}.err" + -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" + ) + set_tests_properties (H5CLEAR_CMP-${testname} PROPERTIES DEPENDS H5CLEAR_CMP-copy_${testname}) + set (last_test "H5CLEAR_CMP-${testname}") + endif () + endmacro () + macro (ADD_H5_RETTEST testname resultcode) if (NOT HDF5_ENABLE_USING_MEMCHECKER) add_test ( @@ -347,11 +418,11 @@ endif() ADD_H5_CMP (h5clr_usage_junk h5clear_usage 1 "" junk.h5) ADD_H5_CMP (h5clr_usage_none h5clear_usage 1 "" orig_h5clear_sec2_v3.h5) ADD_H5_CMP (h5clr_missing_file_m h5clear_missing_file 1 "-m") - ADD_H5_CMP (h5clr_open_fail_s h5clear_open_fail 1 "-s" junk.h5) + ADD_H5_ERR_CMP (h5clr_open_fail_s h5clear_open_fail 1 "-s" junk.h5) ADD_H5_CMP (h5clr_missing_file_ms h5clear_missing_file 1 "-m" "-s") - ADD_H5_CMP (h5clr_open_fail_ms h5clear_open_fail 1 "-m" "-s" junk.h5) - ADD_H5_CMP (h5clr_no_mdc_image_m h5clear_no_mdc_image 0 "-m" orig_h5clear_sec2_v2.h5) - ADD_H5_CMP (h5clr_no_mdc_image_ms h5clear_no_mdc_image 0 "-s" "-m" orig_h5clear_sec2_v0.h5) + ADD_H5_ERR_CMP (h5clr_open_fail_ms h5clear_open_fail 1 "-m" "-s" junk.h5) + ADD_H5_ERR_CMP (h5clr_no_mdc_image_m h5clear_no_mdc_image 0 "-m" orig_h5clear_sec2_v2.h5) + ADD_H5_ERR_CMP (h5clr_no_mdc_image_ms h5clear_no_mdc_image 0 "-s" "-m" orig_h5clear_sec2_v0.h5) # # # @@ -382,8 +453,8 @@ endif() # # # h5clear_mdc_image.h5 already has cache image removed earlier, verify the expected warning from h5clear: - ADD_H5_CMP (h5clr_mdc_image_m h5clear_no_mdc_image 0 "-m" mod_h5clear_mdc_image.h5) - ADD_H5_CMP (h5clr_mdc_image_sm h5clear_no_mdc_image 0 "-s" "-m" mod_h5clear_mdc_image2.h5) + ADD_H5_ERR_CMP (h5clr_mdc_image_m h5clear_no_mdc_image 0 "-m" mod_h5clear_mdc_image.h5) + ADD_H5_ERR_CMP (h5clr_mdc_image_sm h5clear_no_mdc_image 0 "-s" "-m" mod_h5clear_mdc_image2.h5) # # # @@ -404,7 +475,7 @@ endif() # "h5clear -s --increment=0 h5clear_status_noclose.h5" (clear status_flag, EOA = MAX(EOA, EOF) + 0) # (no output, check exit code) # "h5clear --filesize h5clear_status_noclose.h5" (print EOA/EOF after the last action) - ADD_H5_CMP_WITH_COPY (h5clr_open_fail_nc_s 1 h5clear_open_fail h5clear_status_noclose.h5 "--filesize") + ADD_H5_ERR_CMP_WITH_COPY (h5clr_open_fail_nc_s 1 h5clear_open_fail h5clear_status_noclose.h5 "--filesize") ADD_H5_RETTEST (h5clr_mdc_image_nc "false" "-s" "--increment=0" h5clear_status_noclose.h5) ADD_H5_CMP (h5clr_no_mdc_image_nc_m h5clear_status_noclose_after_size 0 "--filesize" h5clear_status_noclose.h5) # diff --git a/tools/test/misc/testfiles/h5clear_missing_file.ddl b/tools/test/misc/testfiles/h5clear_missing_file.ddl index 13eb2c9..32dd549 100644 --- a/tools/test/misc/testfiles/h5clear_missing_file.ddl +++ b/tools/test/misc/testfiles/h5clear_missing_file.ddl @@ -20,4 +20,3 @@ h5clear --increment file_name h5clear --increment=512 file_name Set the EOA to the maximum of (EOA, EOF) + 512 for the file <file_name>. -h5clear error: missing file name diff --git a/tools/test/misc/testfiles/h5clear_missing_file.err b/tools/test/misc/testfiles/h5clear_missing_file.err new file mode 100644 index 0000000..ea21b76 --- /dev/null +++ b/tools/test/misc/testfiles/h5clear_missing_file.err @@ -0,0 +1 @@ +h5clear error: missing file name diff --git a/tools/test/misc/testfiles/h5clear_no_mdc_image.ddl b/tools/test/misc/testfiles/h5clear_no_mdc_image.err index f5acd71..f5acd71 100644 --- a/tools/test/misc/testfiles/h5clear_no_mdc_image.ddl +++ b/tools/test/misc/testfiles/h5clear_no_mdc_image.err diff --git a/tools/test/misc/testfiles/h5clear_open_fail.ddl b/tools/test/misc/testfiles/h5clear_open_fail.err index 895ecd4..895ecd4 100644 --- a/tools/test/misc/testfiles/h5clear_open_fail.ddl +++ b/tools/test/misc/testfiles/h5clear_open_fail.err diff --git a/tools/test/misc/testh5clear.sh.in b/tools/test/misc/testh5clear.sh.in index 11c2ff9..3f2b32f 100644 --- a/tools/test/misc/testh5clear.sh.in +++ b/tools/test/misc/testh5clear.sh.in @@ -62,10 +62,10 @@ test -d $TESTDIR || mkdir -p $TESTDIR # copy test files and expected output files from source dirs to test dir # COPY_TESTFILES=" +$SRC_H5CLEAR_TESTFILES/h5clear_open_fail.err +$SRC_H5CLEAR_TESTFILES/h5clear_no_mdc_image.err $SRC_H5CLEAR_TESTFILES/h5clear_usage.ddl -$SRC_H5CLEAR_TESTFILES/h5clear_open_fail.ddl $SRC_H5CLEAR_TESTFILES/h5clear_missing_file.ddl -$SRC_H5CLEAR_TESTFILES/h5clear_no_mdc_image.ddl $SRC_H5CLEAR_TESTFILES/h5clear_status_noclose_after_size.ddl $SRC_H5CLEAR_TESTFILES/h5clear_noclose_before_size.ddl $SRC_H5CLEAR_TESTFILES/h5clear_noclose_after_size.ddl @@ -179,8 +179,9 @@ TOOLTEST_OUT() { expected=$5 # Prepare expected and actual output expect="$TESTDIR/$expected" + expect_err="$TESTDIR/`basename $expected .ddl`.err" actual="$TESTDIR/`basename $expected .ddl`.out" - actual_err="$TESTDIR/`basename $expected .ddl`.err" + actual_err="$TESTDIR/`basename $expected .ddl`.out.err" actual_sav=${actual}-sav actual_err_sav=${actual_err}-sav @@ -192,7 +193,6 @@ TOOLTEST_OUT() { ) >$actual 2>$actual_err cp $actual $actual_sav cp $actual_err $actual_err_sav - cat $actual_err >> $actual # Compare output COMPARE_OUT $expect $actual @@ -202,6 +202,38 @@ TOOLTEST_OUT() { $RM $actual $actual_err $actual_sav $actual_err_sav fi } +# same as TOOLTEST_OUT just compare stderr +TOOLTEST_ERR() { + fname=$1 + option1=$2 + option2=$3 + option3=$4 + expected=$5 + # Prepare expected and actual output + expect_err="$TESTDIR/$expected" + expect="$TESTDIR/`basename $expected .err`.ddl" + actual="$TESTDIR/`basename $expected .err`.out" + actual_err="$TESTDIR/`basename $expected .err`.out.err" + actual_sav=${actual}-sav + actual_err_sav=${actual_err}-sav + + # Run test. + TESTING $H5CLEAR $option1 $option2 $option3 $option4 $fname + ( + cd $TESTDIR + $RUNSERIAL $H5CLEAR_BIN $option1 $option2 $option3 $option4 $fname + ) >$actual 2>$actual_err + cp $actual $actual_sav + cp $actual_err $actual_err_sav + + # Compare output + COMPARE_OUT $expect_err $actual_err + + # Clean up output file + if test -z "$HDF5_NOCLEANUP"; then + $RM $actual $actual_err $actual_sav $actual_err_sav + fi +} # $1 is the filename to open # $2 is the expected return from the open/check program @@ -274,11 +306,11 @@ TOOLTEST_OUT "" "" "" "" h5clear_usage.ddl TOOLTEST_OUT junk.h5 "" "" "" h5clear_usage.ddl TOOLTEST_OUT orig_h5clear_sec2_v3.h5 "" "" "" h5clear_usage.ddl TOOLTEST_OUT "" -m "" "" h5clear_missing_file.ddl -TOOLTEST_OUT junk.h5 -s "" "" h5clear_open_fail.ddl +TOOLTEST_ERR junk.h5 -s "" "" h5clear_open_fail.err TOOLTEST_OUT "" -m -s "" h5clear_missing_file.ddl -TOOLTEST_OUT junk.h5 -m -s "" h5clear_open_fail.ddl -TOOLTEST_OUT orig_h5clear_sec2_v2.h5 -m "" "" h5clear_no_mdc_image.ddl -TOOLTEST_OUT orig_h5clear_sec2_v0.h5 -s -m "" h5clear_no_mdc_image.ddl +TOOLTEST_ERR junk.h5 -m -s "" h5clear_open_fail.err +TOOLTEST_ERR orig_h5clear_sec2_v2.h5 -m "" "" h5clear_no_mdc_image.err +TOOLTEST_ERR orig_h5clear_sec2_v0.h5 -s -m "" h5clear_no_mdc_image.err # # # The following are tests to verify the expected exit code from h5clear: @@ -308,8 +340,8 @@ TOOLTEST h5clear_sec2_v0.h5 -l -m $FAIL # # # h5clear_mdc_image.h5 already has cache image removed earlier, verify the expected warning from h5clear: -TOOLTEST_OUT mod_h5clear_mdc_image.h5 -m "" "" h5clear_no_mdc_image.ddl -TOOLTEST_OUT mod_h5clear_mdc_image.h5 -s -m "" h5clear_no_mdc_image.ddl +TOOLTEST_ERR mod_h5clear_mdc_image.h5 -m "" "" h5clear_no_mdc_image.err +TOOLTEST_ERR mod_h5clear_mdc_image.h5 -s -m "" h5clear_no_mdc_image.err # # # @@ -342,16 +374,16 @@ OPEN_CHK h5clear_sec2_v2.h5 $SUCCEED # # # -# (1) h5clear_status_noclose.h5 +# (1) h5clear_status_noclose.h5 # "h5clear --filesize h5clear_status_noclose.h5" (unable to open the file because status_flag is on) -# "h5clear -s --increment=0 h5clear_status_noclose.h5" (clear status_flag, EOA = MAX(EOA, EOF) + 0) +# "h5clear -s --increment=0 h5clear_status_noclose.h5" (clear status_flag, EOA = MAX(EOA, EOF) + 0) # (no output, check exit code) # "h5clear --filesize h5clear_status_noclose_user.h5" (print EOA/EOF after the last action) -TOOLTEST_OUT h5clear_status_noclose.h5 --filesize "" "" h5clear_open_fail.ddl +TOOLTEST_ERR h5clear_status_noclose.h5 --filesize "" "" h5clear_open_fail.err TOOLTEST h5clear_status_noclose.h5 -s --increment=0 $SUCCEED TOOLTEST_OUT h5clear_status_noclose.h5 --filesize "" "" h5clear_status_noclose_after_size.ddl # -# (2) h5clear_fsm_persist_noclose.h5 +# (2) h5clear_fsm_persist_noclose.h5 # "h5clear --filesize h5clear_fsm_persist_noclose.h5" (print EOA/EOF before the next action) # "h5clear --increment=0 h5clear_fsm_persist_noclose.h5" (EOA = MAX(EOA, EOF)) (no output, check exit code) # "h5clear --filesize h5clear_fsm_persist_noclose.h5" (print EOA/EOF after the last action) @@ -364,7 +396,7 @@ TOOLTEST_OUT h5clear_fsm_persist_noclose.h5 --filesize "" "" h5clear_noclose_aft # "h5clear --increment h5clear_fsm_persist_equal.h5" (EOA = MAX(EOA, EOF) + 1M) (no output, check exit code) # "h5clear --filesize h5clear_fsm_persist_equal.h5" (print EOA/EOF after the last action) TOOLTEST_OUT h5clear_fsm_persist_equal.h5 --filesize "" "" h5clear_equal_before_size.ddl -TOOLTEST h5clear_fsm_persist_equal.h5 --increment "" $SUCCEED +TOOLTEST h5clear_fsm_persist_equal.h5 --increment "" $SUCCEED TOOLTEST_OUT h5clear_fsm_persist_equal.h5 --filesize "" "" h5clear_equal_after_size.ddl # # (4) h5clear_fsm_persist_greater.h5 @@ -372,7 +404,7 @@ TOOLTEST_OUT h5clear_fsm_persist_equal.h5 --filesize "" "" h5clear_equal_after_s # "h5clear --increment=0 h5clear_fsm_persist_greater.h5" (EOA = MAX(EOA, EOF) + 0) (no output, check exit code) # "h5clear --filesize h5clear_fsm_persist_greater.h5" (print EOA/EOF after the last action) TOOLTEST_OUT h5clear_fsm_persist_greater.h5 --filesize "" "" h5clear_greater_before_size.ddl -TOOLTEST h5clear_fsm_persist_greater.h5 --increment=0 "" $SUCCEED +TOOLTEST h5clear_fsm_persist_greater.h5 --increment=0 "" $SUCCEED TOOLTEST_OUT h5clear_fsm_persist_greater.h5 --filesize "" "" h5clear_greater_after_size.ddl # # (5) h5clear_fsm_persist_less.h5 @@ -380,7 +412,7 @@ TOOLTEST_OUT h5clear_fsm_persist_greater.h5 --filesize "" "" h5clear_greater_aft # "h5clear --increment=200 h5clear_fsm_persist_less.h5" (EOA = MAX(EOA, EOF) + 200) (no output, check exit code) # "h5clear --filesize h5clear_fsm_persist_less.h5" (print EOA/EOF after the last action) TOOLTEST_OUT h5clear_fsm_persist_less.h5 --filesize "" "" h5clear_less_before_size.ddl -TOOLTEST h5clear_fsm_persist_less.h5 --increment=200 "" $SUCCEED +TOOLTEST h5clear_fsm_persist_less.h5 --increment=200 "" $SUCCEED TOOLTEST_OUT h5clear_fsm_persist_less.h5 --filesize "" "" h5clear_less_after_size.ddl # # (6) h5clear_fsm_persist_user_equal.h5 @@ -388,7 +420,7 @@ TOOLTEST_OUT h5clear_fsm_persist_less.h5 --filesize "" "" h5clear_less_after_siz # "h5clear --increment h5clear_fsm_persist_user_equal.h5" (EOA = MAX(EOA, EOF) + 1M) (no output, check exit code) # "h5clear --filesize h5clear_fsm_persist_user_equal.h5" (print EOA/EOF after the last action) TOOLTEST_OUT h5clear_fsm_persist_user_equal.h5 --filesize "" "" h5clear_user_equal_before_size.ddl -TOOLTEST h5clear_fsm_persist_user_equal.h5 --increment "" $SUCCEED +TOOLTEST h5clear_fsm_persist_user_equal.h5 --increment "" $SUCCEED TOOLTEST_OUT h5clear_fsm_persist_user_equal.h5 --filesize "" "" h5clear_user_equal_after_size.ddl # # (7) h5clear_fsm_persist_user_greater.h5 @@ -396,7 +428,7 @@ TOOLTEST_OUT h5clear_fsm_persist_user_equal.h5 --filesize "" "" h5clear_user_equ # "h5clear --increment=0 h5clear_fsm_persist_user_greater.h5" (EOA = MAX(EOA, EOF) + 0) (no output, check exit code) # "h5clear --filesize h5clear_fsm_persist_user_greater.h5" (print EOA/EOF after the last action) TOOLTEST_OUT h5clear_fsm_persist_user_greater.h5 --filesize "" "" h5clear_user_greater_before_size.ddl -TOOLTEST h5clear_fsm_persist_user_greater.h5 --increment=0 "" $SUCCEED +TOOLTEST h5clear_fsm_persist_user_greater.h5 --increment=0 "" $SUCCEED TOOLTEST_OUT h5clear_fsm_persist_user_greater.h5 --filesize "" "" h5clear_user_greater_after_size.ddl # # (8) h5clear_fsm_persist_user_less.h5 @@ -404,7 +436,7 @@ TOOLTEST_OUT h5clear_fsm_persist_user_greater.h5 --filesize "" "" h5clear_user_g # "h5clear --increment=200 h5clear_fsm_persist_user_less.h5" (EOA = MAX(EOA, EOF) + 200) (no output, check exit code) # "h5clear --filesize h5clear_fsm_persist_user_less.h5" (print EOA/EOF after the last action) TOOLTEST_OUT h5clear_fsm_persist_user_less.h5 --filesize "" "" h5clear_user_less_before_size.ddl -TOOLTEST h5clear_fsm_persist_user_less.h5 --increment=200 "" $SUCCEED +TOOLTEST h5clear_fsm_persist_user_less.h5 --increment=200 "" $SUCCEED TOOLTEST_OUT h5clear_fsm_persist_user_less.h5 --filesize "" "" h5clear_user_less_after_size.ddl # # diff --git a/tools/testfiles/err_attr_dspace.ddl b/tools/testfiles/err_attr_dspace.ddl index 6c45322..48ef659 100644 --- a/tools/testfiles/err_attr_dspace.ddl +++ b/tools/testfiles/err_attr_dspace.ddl @@ -2,4 +2,3 @@ HDF5 "err_attr_dspace.h5" { GROUP "/" { } } -h5dump error: error getting attribute information diff --git a/tools/testfiles/non_existing.ddl b/tools/testfiles/non_existing.ddl index 4377f8d..4407eae 100644 --- a/tools/testfiles/non_existing.ddl +++ b/tools/testfiles/non_existing.ddl @@ -28,4 +28,3 @@ GROUP "/" { } } } -h5dump error: unable to open file "non_existing.h5" diff --git a/tools/testfiles/nosuchfile.ls b/tools/testfiles/nosuchfile.ls index 8c4ee42..e69de29 100644 --- a/tools/testfiles/nosuchfile.ls +++ b/tools/testfiles/nosuchfile.ls @@ -1 +0,0 @@ -nosuchfile.h5: unable to open file diff --git a/tools/testfiles/pbits/tnofilename-with-packed-bits.ddl b/tools/testfiles/pbits/tnofilename-with-packed-bits.ddl index 0a3beb0..19de76f 100644 --- a/tools/testfiles/pbits/tnofilename-with-packed-bits.ddl +++ b/tools/testfiles/pbits/tnofilename-with-packed-bits.ddl @@ -135,4 +135,3 @@ usage: h5dump [OPTIONS] files h5dump -d /foo -f family fam%05d.h5 -h5dump error: missing file name diff --git a/tools/testfiles/pbits/tpbitsCharLengthExceeded.ddl b/tools/testfiles/pbits/tpbitsCharLengthExceeded.ddl index b0683a7..b281827 100644 --- a/tools/testfiles/pbits/tpbitsCharLengthExceeded.ddl +++ b/tools/testfiles/pbits/tpbitsCharLengthExceeded.ddl @@ -15,4 +15,3 @@ DATASET "/DS08BITS" { } } } -h5dump error: Packed Bit offset+length value(9) too large. Max is 8 diff --git a/tools/testfiles/pbits/tpbitsCharOffsetExceeded.ddl b/tools/testfiles/pbits/tpbitsCharOffsetExceeded.ddl index 530fa05..ee56a5c 100644 --- a/tools/testfiles/pbits/tpbitsCharOffsetExceeded.ddl +++ b/tools/testfiles/pbits/tpbitsCharOffsetExceeded.ddl @@ -15,4 +15,3 @@ DATASET "/DS08BITS" { } } } -h5dump error: Packed Bit offset+length value(9) too large. Max is 8 diff --git a/tools/testfiles/pbits/tpbitsIncomplete.ddl b/tools/testfiles/pbits/tpbitsIncomplete.ddl index b353065..19de76f 100644 --- a/tools/testfiles/pbits/tpbitsIncomplete.ddl +++ b/tools/testfiles/pbits/tpbitsIncomplete.ddl @@ -135,4 +135,3 @@ usage: h5dump [OPTIONS] files h5dump -d /foo -f family fam%05d.h5 -h5dump error: Bad mask list(0,2,2,1,0,2,2,) diff --git a/tools/testfiles/pbits/tpbitsIntLengthExceeded.ddl b/tools/testfiles/pbits/tpbitsIntLengthExceeded.ddl index 1c919cd..1cba6d5 100644 --- a/tools/testfiles/pbits/tpbitsIntLengthExceeded.ddl +++ b/tools/testfiles/pbits/tpbitsIntLengthExceeded.ddl @@ -15,4 +15,3 @@ DATASET "/DS16BITS" { } } } -h5dump error: Packed Bit offset+length value(17) too large. Max is 16 diff --git a/tools/testfiles/pbits/tpbitsIntOffsetExceeded.ddl b/tools/testfiles/pbits/tpbitsIntOffsetExceeded.ddl index f3b2a8c..330d61f 100644 --- a/tools/testfiles/pbits/tpbitsIntOffsetExceeded.ddl +++ b/tools/testfiles/pbits/tpbitsIntOffsetExceeded.ddl @@ -15,4 +15,3 @@ DATASET "/DS16BITS" { } } } -h5dump error: Packed Bit offset+length value(17) too large. Max is 16 diff --git a/tools/testfiles/pbits/tpbitsLengthExceeded.ddl b/tools/testfiles/pbits/tpbitsLengthExceeded.ddl index ffe0da9..19de76f 100644 --- a/tools/testfiles/pbits/tpbitsLengthExceeded.ddl +++ b/tools/testfiles/pbits/tpbitsLengthExceeded.ddl @@ -135,4 +135,3 @@ usage: h5dump [OPTIONS] files h5dump -d /foo -f family fam%05d.h5 -h5dump error: Packed Bit offset+length value(65) too large. Max is 64 diff --git a/tools/testfiles/pbits/tpbitsLengthPositive.ddl b/tools/testfiles/pbits/tpbitsLengthPositive.ddl index 4502143..19de76f 100644 --- a/tools/testfiles/pbits/tpbitsLengthPositive.ddl +++ b/tools/testfiles/pbits/tpbitsLengthPositive.ddl @@ -135,4 +135,3 @@ usage: h5dump [OPTIONS] files h5dump -d /foo -f family fam%05d.h5 -h5dump error: Packed Bit length value(0) must be positive. diff --git a/tools/testfiles/pbits/tpbitsLongLengthExceeded.ddl b/tools/testfiles/pbits/tpbitsLongLengthExceeded.ddl index 812c300..44ec077 100644 --- a/tools/testfiles/pbits/tpbitsLongLengthExceeded.ddl +++ b/tools/testfiles/pbits/tpbitsLongLengthExceeded.ddl @@ -23,4 +23,3 @@ DATASET "/DS32BITS" { } } } -h5dump error: Packed Bit offset+length value(33) too large. Max is 32 diff --git a/tools/testfiles/pbits/tpbitsLongOffsetExceeded.ddl b/tools/testfiles/pbits/tpbitsLongOffsetExceeded.ddl index cbea722..c775557 100644 --- a/tools/testfiles/pbits/tpbitsLongOffsetExceeded.ddl +++ b/tools/testfiles/pbits/tpbitsLongOffsetExceeded.ddl @@ -23,4 +23,3 @@ DATASET "/DS32BITS" { } } } -h5dump error: Packed Bit offset+length value(33) too large. Max is 32 diff --git a/tools/testfiles/pbits/tpbitsMaxExceeded.ddl b/tools/testfiles/pbits/tpbitsMaxExceeded.ddl index 011f6c9..19de76f 100644 --- a/tools/testfiles/pbits/tpbitsMaxExceeded.ddl +++ b/tools/testfiles/pbits/tpbitsMaxExceeded.ddl @@ -135,4 +135,3 @@ usage: h5dump [OPTIONS] files h5dump -d /foo -f family fam%05d.h5 -h5dump error: Too many masks requested (max. 8). Mask list(0,1,0,1,1,1,2,1,3,1,4,1,5,1,6,1,7,1) diff --git a/tools/testfiles/pbits/tpbitsOffsetExceeded.ddl b/tools/testfiles/pbits/tpbitsOffsetExceeded.ddl index 857fe62..19de76f 100644 --- a/tools/testfiles/pbits/tpbitsOffsetExceeded.ddl +++ b/tools/testfiles/pbits/tpbitsOffsetExceeded.ddl @@ -135,4 +135,3 @@ usage: h5dump [OPTIONS] files h5dump -d /foo -f family fam%05d.h5 -h5dump error: Packed Bit offset value(64) must be between 0 and 63 diff --git a/tools/testfiles/pbits/tpbitsOffsetNegative.ddl b/tools/testfiles/pbits/tpbitsOffsetNegative.ddl index 9ac1160..19de76f 100644 --- a/tools/testfiles/pbits/tpbitsOffsetNegative.ddl +++ b/tools/testfiles/pbits/tpbitsOffsetNegative.ddl @@ -135,4 +135,3 @@ usage: h5dump [OPTIONS] files h5dump -d /foo -f family fam%05d.h5 -h5dump error: Bad mask list(-1,1) diff --git a/tools/testfiles/texceedsubblock.ddl b/tools/testfiles/texceedsubblock.ddl index 499e0d2..69ec706 100644 --- a/tools/testfiles/texceedsubblock.ddl +++ b/tools/testfiles/texceedsubblock.ddl @@ -1,3 +1,2 @@ HDF5 "taindices.h5" { } -h5dump error: number of block dims (2) exceed dataset dims (1) diff --git a/tools/testfiles/texceedsubcount.ddl b/tools/testfiles/texceedsubcount.ddl index 81e8c4a..69ec706 100644 --- a/tools/testfiles/texceedsubcount.ddl +++ b/tools/testfiles/texceedsubcount.ddl @@ -1,3 +1,2 @@ HDF5 "taindices.h5" { } -h5dump error: number of count dims (2) exceed dataset dims (1) diff --git a/tools/testfiles/texceedsubstart.ddl b/tools/testfiles/texceedsubstart.ddl index cb535a0..69ec706 100644 --- a/tools/testfiles/texceedsubstart.ddl +++ b/tools/testfiles/texceedsubstart.ddl @@ -1,3 +1,2 @@ HDF5 "taindices.h5" { } -h5dump error: number of start dims (2) exceed dataset dims (1) diff --git a/tools/testfiles/texceedsubstride.ddl b/tools/testfiles/texceedsubstride.ddl index bf85997..69ec706 100644 --- a/tools/testfiles/texceedsubstride.ddl +++ b/tools/testfiles/texceedsubstride.ddl @@ -1,3 +1,2 @@ HDF5 "taindices.h5" { } -h5dump error: number of stride dims (2) exceed dataset dims (1) diff --git a/tools/testfiles/textlinksrc-nodangle-1.ls b/tools/testfiles/textlinksrc-nodangle-1.ls index 6d1da9e..491f696 100644 --- a/tools/testfiles/textlinksrc-nodangle-1.ls +++ b/tools/testfiles/textlinksrc-nodangle-1.ls @@ -56,5 +56,3 @@ usage: h5ls [OPTIONS] file[/OBJECT] [file[/[OBJECT]...] Replaced by --follow-symlinks. -e, --errors Show all HDF5 error reporting Replaced by --enable-error-stack. -Error: --no-dangling-links must be used along with --follow-symlinks option! - diff --git a/tools/testfiles/tgroup-1.ls b/tools/testfiles/tgroup-1.ls index 069d43e..491f696 100644 --- a/tools/testfiles/tgroup-1.ls +++ b/tools/testfiles/tgroup-1.ls @@ -56,5 +56,3 @@ usage: h5ls [OPTIONS] file[/OBJECT] [file[/[OBJECT]...] Replaced by --follow-symlinks. -e, --errors Show all HDF5 error reporting Replaced by --enable-error-stack. -Error: 'recursive' option not compatible with 'group info' option! - diff --git a/tools/testfiles/tstarfile.ddl b/tools/testfiles/tstarfile.ddl index 87c3f87..1cd87f7 100644 --- a/tools/testfiles/tstarfile.ddl +++ b/tools/testfiles/tstarfile.ddl @@ -86,4 +86,3 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #004: (file name) line (number) in H5L_get_info_cb(): name doesn't exist major: Symbol table minor: Object not found -h5dump error: unable to get link info from "Dataset1" |