diff options
73 files changed, 1151 insertions, 979 deletions
diff --git a/CMakeInstallation.cmake b/CMakeInstallation.cmake index bff0c49..d811ea5 100644 --- a/CMakeInstallation.cmake +++ b/CMakeInstallation.cmake @@ -205,7 +205,6 @@ if (NOT HDF5_EXTERNALLY_CONFIGURED) if (EXISTS "${HDF5_SOURCE_DIR}/release_docs" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/release_docs") set (release_files ${HDF5_SOURCE_DIR}/release_docs/USING_HDF5_CMake.txt - ${HDF5_SOURCE_DIR}/release_docs/COPYING ${HDF5_SOURCE_DIR}/release_docs/RELEASE.txt ) if (WIN32) @@ -263,9 +262,9 @@ if (NOT HDF5_EXTERNALLY_CONFIGURED AND NOT HDF5_NO_PACKAGES) set (CPACK_PACKAGE_VERSION_MAJOR "${HDF5_PACKAGE_VERSION_MAJOR}") set (CPACK_PACKAGE_VERSION_MINOR "${HDF5_PACKAGE_VERSION_MINOR}") set (CPACK_PACKAGE_VERSION_PATCH "") + set (CPACK_RESOURCE_FILE_LICENSE "${CMAKE_CURRENT_SOURCE_DIR}/COPYING") if (EXISTS "${HDF5_SOURCE_DIR}/release_docs") set (CPACK_PACKAGE_DESCRIPTION_FILE "${CMAKE_CURRENT_SOURCE_DIR}/release_docs/RELEASE.txt") - set (CPACK_RESOURCE_FILE_LICENSE "${CMAKE_CURRENT_SOURCE_DIR}/COPYING") set (CPACK_RESOURCE_FILE_README "${CMAKE_CURRENT_SOURCE_DIR}/release_docs/RELEASE.txt") endif () set (CPACK_PACKAGE_RELOCATABLE TRUE) diff --git a/CMakeLists.txt b/CMakeLists.txt index e34830b..4054110 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -507,6 +507,14 @@ else () endif () #----------------------------------------------------------------------------- +# perl is used in some optional src and tests, check availability +find_package (Perl) +if (PERL_FOUND) + set (H5_PERL_FOUND YES) +endif () +#----------------------------------------------------------------------------- + +#----------------------------------------------------------------------------- # Option to Build Static executables #----------------------------------------------------------------------------- option (BUILD_STATIC_EXECS "Build Static Executables" OFF) @@ -517,12 +525,18 @@ if (BUILD_STATIC_EXECS) endif () endif () +option (HDF5_ENABLE_ANALYZER_TOOLS "enable the use of Clang tools" OFF) +mark_as_advanced (HDF5_ENABLE_ANALYZER_TOOLS) if (HDF5_ENABLE_ANALYZER_TOOLS) include (${HDF5_SOURCE_DIR}/config/sanitizer/tools.cmake) endif () +option (HDF5_ENABLE_SANITIZERS "execute the Clang sanitizer" OFF) +mark_as_advanced (HDF5_ENABLE_SANITIZERS) if (HDF5_ENABLE_SANITIZERS) include (${HDF5_SOURCE_DIR}/config/sanitizer/sanitizers.cmake) endif () +option (HDF5_ENABLE_FORMATTERS "format source files" OFF) +mark_as_advanced (HDF5_ENABLE_FORMATTERS) if (HDF5_ENABLE_FORMATTERS) include (${HDF5_SOURCE_DIR}/config/sanitizer/formatting.cmake) endif () @@ -1029,7 +1043,9 @@ if (EXISTS "${HDF5_SOURCE_DIR}/fortran" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/for if (HDF5_BUILD_FORTRAN) include (${HDF_RESOURCES_EXT_DIR}/HDFUseFortran.cmake) - message (STATUS "Fortran compiler ID is ${CMAKE_Fortran_COMPILER_ID}") + if (CMAKE_VERSION VERSION_GREATER_EQUAL "3.15.0") + message (VERBOSE "Fortran compiler ID is ${CMAKE_Fortran_COMPILER_ID}") + endif () include (${HDF_RESOURCES_DIR}/HDFFortranCompilerFlags.cmake) include (${HDF_RESOURCES_DIR}/HDF5UseFortran.cmake) set (LINK_Fortran_LIBS ${LINK_LIBS}) @@ -1071,7 +1087,7 @@ endif () # Option to build HDF5 C++ Library #----------------------------------------------------------------------------- if (EXISTS "${HDF5_SOURCE_DIR}/c++" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/c++") - option (HDF5_BUILD_CPP_LIB "Build HDF5 C++ Library" ON) + option (HDF5_BUILD_CPP_LIB "Build HDF5 C++ Library" OFF) if (HDF5_BUILD_CPP_LIB) # check for unsupported options if (HDF5_ENABLE_PARALLEL) diff --git a/c++/src/CMakeLists.txt b/c++/src/CMakeLists.txt index 8608c67..4b1a2d6 100644 --- a/c++/src/CMakeLists.txt +++ b/c++/src/CMakeLists.txt @@ -209,7 +209,11 @@ install ( ) if (NOT WIN32 AND NOT MINGW) - set (_PKG_CONFIG_COMPILER ${CMAKE_CXX_COMPILER}) + if (HDF5_ENABLE_PARALLEL AND MPI_CXX_FOUND) + set (_PKG_CONFIG_COMPILER ${MPI_CXX_COMPILER}) + else () + set (_PKG_CONFIG_COMPILER ${CMAKE_CXX_COMPILER}) + endif () configure_file ( ${HDF_RESOURCES_DIR}/libh5cc.in ${HDF5_BINARY_DIR}/CMakeFiles/h5c++ diff --git a/c++/src/H5ArrayType.h b/c++/src/H5ArrayType.h index 4302352..b93ae4a 100644 --- a/c++/src/H5ArrayType.h +++ b/c++/src/H5ArrayType.h @@ -37,7 +37,7 @@ class H5_DLLCPP ArrayType : public DataType { // Returns an ArrayType object via DataType* by decoding the // binary object description of this type. - virtual DataType *decode() const; + virtual DataType *decode() const H5_OVERRIDE; // Returns the number of dimensions of this array datatype. int getArrayNDims() const; @@ -49,7 +49,7 @@ class H5_DLLCPP ArrayType : public DataType { ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("ArrayType"); } @@ -61,7 +61,7 @@ class H5_DLLCPP ArrayType : public DataType { ArrayType(const hid_t existing_id); // Noop destructor - virtual ~ArrayType(); + virtual ~ArrayType() H5_OVERRIDE; // Default constructor ArrayType(); diff --git a/c++/src/H5AtomType.h b/c++/src/H5AtomType.h index 84da5e9..e00a308 100644 --- a/c++/src/H5AtomType.h +++ b/c++/src/H5AtomType.h @@ -58,7 +58,7 @@ class H5_DLLCPP AtomType : public DataType { ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("AtomType"); } @@ -68,7 +68,7 @@ class H5_DLLCPP AtomType : public DataType { AtomType(const AtomType &original); // Noop destructor - virtual ~AtomType(); + virtual ~AtomType() H5_OVERRIDE; #endif // DOXYGEN_SHOULD_SKIP_THIS protected: diff --git a/c++/src/H5Attribute.h b/c++/src/H5Attribute.h index 41e5a31..71bfa14 100644 --- a/c++/src/H5Attribute.h +++ b/c++/src/H5Attribute.h @@ -38,7 +38,7 @@ class H5_DLLCPP Attribute : public AbstractDs, public H5Location { Attribute(const hid_t attr_id); // Closes this attribute. - virtual void close(); + virtual void close() H5_OVERRIDE; // Gets the name of this attribute. ssize_t getName(char *attr_name, size_t buf_size = 0) const; @@ -50,13 +50,13 @@ class H5_DLLCPP Attribute : public AbstractDs, public H5Location { ssize_t getName(size_t buf_size, H5std_string &attr_name) const; // Gets a copy of the dataspace for this attribute. - virtual DataSpace getSpace() const; + virtual DataSpace getSpace() const H5_OVERRIDE; // Returns the amount of storage size required for this attribute. - virtual hsize_t getStorageSize() const; + virtual hsize_t getStorageSize() const H5_OVERRIDE; // Returns the in memory size of this attribute's data. - virtual size_t getInMemDataSize() const; + virtual size_t getInMemDataSize() const H5_OVERRIDE; // Reads data from this attribute. void read(const DataType &mem_type, void *buf) const; @@ -68,21 +68,21 @@ class H5_DLLCPP Attribute : public AbstractDs, public H5Location { ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("Attribute"); } // Gets the attribute id. - virtual hid_t getId() const; + virtual hid_t getId() const H5_OVERRIDE; // Destructor: properly terminates access to this attribute. - virtual ~Attribute(); + virtual ~Attribute() H5_OVERRIDE; #ifndef DOXYGEN_SHOULD_SKIP_THIS protected: // Sets the attribute id. - virtual void p_setId(const hid_t new_id); + virtual void p_setId(const hid_t new_id) H5_OVERRIDE; #endif // DOXYGEN_SHOULD_SKIP_THIS private: @@ -92,7 +92,7 @@ class H5_DLLCPP Attribute : public AbstractDs, public H5Location { // getTypeClass and various API functions getXxxType // defined in AbstractDs for generic datatype and specific // sub-types - virtual hid_t p_get_type() const; + virtual hid_t p_get_type() const H5_OVERRIDE; // Reads variable or fixed len strings from this attribute. void p_read_variable_len(const DataType &mem_type, H5std_string &strg) const; diff --git a/c++/src/H5CompType.h b/c++/src/H5CompType.h index 6a4c093..4424d89 100644 --- a/c++/src/H5CompType.h +++ b/c++/src/H5CompType.h @@ -45,7 +45,7 @@ class H5_DLLCPP CompType : public DataType { // Returns a CompType object via DataType* by decoding the binary // object description of this type. - virtual DataType *decode() const; + virtual DataType *decode() const H5_OVERRIDE; // Returns the type class of the specified member of this compound // datatype. It provides to the user a way of knowing what type @@ -108,13 +108,13 @@ class H5_DLLCPP CompType : public DataType { ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("CompType"); } // Noop destructor. - virtual ~CompType(); + virtual ~CompType() H5_OVERRIDE; private: // Contains common code that is used by the member functions diff --git a/c++/src/H5DaccProp.h b/c++/src/H5DaccProp.h index 7d6b250..398918d 100644 --- a/c++/src/H5DaccProp.h +++ b/c++/src/H5DaccProp.h @@ -38,7 +38,7 @@ class H5_DLLCPP DSetAccPropList : public LinkAccPropList { ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("DSetAccPropList"); } @@ -51,7 +51,7 @@ class H5_DLLCPP DSetAccPropList : public LinkAccPropList { DSetAccPropList(const hid_t plist_id); // Noop destructor. - virtual ~DSetAccPropList(); + virtual ~DSetAccPropList() H5_OVERRIDE; #ifndef DOXYGEN_SHOULD_SKIP_THIS diff --git a/c++/src/H5DataSet.h b/c++/src/H5DataSet.h index c745470..619bc30 100644 --- a/c++/src/H5DataSet.h +++ b/c++/src/H5DataSet.h @@ -28,7 +28,7 @@ namespace H5 { class H5_DLLCPP DataSet : public H5Object, public AbstractDs { public: // Close this dataset. - virtual void close(); + virtual void close() H5_OVERRIDE; // Extends the dataset with unlimited dimension. void extend(const hsize_t *size) const; @@ -53,16 +53,16 @@ class H5_DLLCPP DataSet : public H5Object, public AbstractDs { haddr_t getOffset() const; // Gets the dataspace of this dataset. - virtual DataSpace getSpace() const; + virtual DataSpace getSpace() const H5_OVERRIDE; // Determines whether space has been allocated for a dataset. void getSpaceStatus(H5D_space_status_t &status) const; // Returns the amount of storage size required for this dataset. - virtual hsize_t getStorageSize() const; + virtual hsize_t getStorageSize() const H5_OVERRIDE; // Returns the in memory size of this attribute's data. - virtual size_t getInMemDataSize() const; + virtual size_t getInMemDataSize() const H5_OVERRIDE; // Returns the number of bytes required to store VL data. hsize_t getVlenBufSize(const DataType &type, const DataSpace &space) const; @@ -100,7 +100,7 @@ class H5_DLLCPP DataSet : public H5Object, public AbstractDs { ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("DataSet"); } @@ -121,15 +121,15 @@ class H5_DLLCPP DataSet : public H5Object, public AbstractDs { DataSet(const hid_t existing_id); // Gets the dataset id. - virtual hid_t getId() const; + virtual hid_t getId() const H5_OVERRIDE; // Destructor: properly terminates access to this dataset. - virtual ~DataSet(); + virtual ~DataSet() H5_OVERRIDE; protected: #ifndef DOXYGEN_SHOULD_SKIP_THIS // Sets the dataset id. - virtual void p_setId(const hid_t new_id); + virtual void p_setId(const hid_t new_id) H5_OVERRIDE; #endif // DOXYGEN_SHOULD_SKIP_THIS private: @@ -139,7 +139,7 @@ class H5_DLLCPP DataSet : public H5Object, public AbstractDs { // getTypeClass and various API functions getXxxType // defined in AbstractDs for generic datatype and specific // sub-types - virtual hid_t p_get_type() const; + virtual hid_t p_get_type() const H5_OVERRIDE; // Reads variable or fixed len strings from this dataset. void p_read_fixed_len(const hid_t mem_type_id, const hid_t mem_space_id, const hid_t file_space_id, diff --git a/c++/src/H5DataSpace.h b/c++/src/H5DataSpace.h index 470de74..5583baa 100644 --- a/c++/src/H5DataSpace.h +++ b/c++/src/H5DataSpace.h @@ -127,7 +127,7 @@ class H5_DLLCPP DataSpace : public IdComponent { static void deleteConstants(); // Destructor: properly terminates access to this dataspace. - virtual ~DataSpace(); + virtual ~DataSpace() H5_OVERRIDE; #ifndef DOXYGEN_SHOULD_SKIP_THIS diff --git a/c++/src/H5DataType.h b/c++/src/H5DataType.h index 49f5348..7dd371b 100644 --- a/c++/src/H5DataType.h +++ b/c++/src/H5DataType.h @@ -47,7 +47,7 @@ class H5_DLLCPP DataType : public H5Object { // PropList& plist = PropList::DEFAULT); // Closes this datatype. - virtual void close(); + virtual void close() H5_OVERRIDE; // Copies an existing datatype to this datatype object. void copy(const DataType &like_type); @@ -133,7 +133,7 @@ class H5_DLLCPP DataType : public H5Object { ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("DataType"); } @@ -148,10 +148,10 @@ class H5_DLLCPP DataType : public H5Object { bool hasBinaryDesc() const; // Gets the datatype id. - virtual hid_t getId() const; + virtual hid_t getId() const H5_OVERRIDE; // Destructor: properly terminates access to this datatype. - virtual ~DataType(); + virtual ~DataType() H5_OVERRIDE; protected: #ifndef DOXYGEN_SHOULD_SKIP_THIS @@ -162,7 +162,7 @@ class H5_DLLCPP DataType : public H5Object { hid_t p_decode() const; // Sets the datatype id. - virtual void p_setId(const hid_t new_id); + virtual void p_setId(const hid_t new_id) H5_OVERRIDE; // Opens a datatype and returns the id. hid_t p_opentype(const H5Location &loc, const char *dtype_name) const; diff --git a/c++/src/H5DcreatProp.h b/c++/src/H5DcreatProp.h index 820c0d1..a576518 100644 --- a/c++/src/H5DcreatProp.h +++ b/c++/src/H5DcreatProp.h @@ -128,7 +128,7 @@ class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("DSetCreatPropList"); } @@ -141,7 +141,7 @@ class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { DSetCreatPropList(const hid_t plist_id); // Noop destructor. - virtual ~DSetCreatPropList(); + virtual ~DSetCreatPropList() H5_OVERRIDE; #ifndef DOXYGEN_SHOULD_SKIP_THIS diff --git a/c++/src/H5DxferProp.h b/c++/src/H5DxferProp.h index 1e4d668..3925a57 100644 --- a/c++/src/H5DxferProp.h +++ b/c++/src/H5DxferProp.h @@ -100,7 +100,7 @@ class H5_DLLCPP DSetMemXferPropList : public PropList { ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("DSetMemXferPropList"); } @@ -113,7 +113,7 @@ class H5_DLLCPP DSetMemXferPropList : public PropList { DSetMemXferPropList(const hid_t plist_id); // Noop destructor - virtual ~DSetMemXferPropList(); + virtual ~DSetMemXferPropList() H5_OVERRIDE; #ifndef DOXYGEN_SHOULD_SKIP_THIS diff --git a/c++/src/H5EnumType.h b/c++/src/H5EnumType.h index 484405a..2501e4b 100644 --- a/c++/src/H5EnumType.h +++ b/c++/src/H5EnumType.h @@ -41,7 +41,7 @@ class H5_DLLCPP EnumType : public DataType { // Returns an EnumType object via DataType* by decoding the // binary object description of this type. - virtual DataType *decode() const; + virtual DataType *decode() const H5_OVERRIDE; // Returns the number of members in this enumeration datatype. int getNmembers() const; @@ -68,7 +68,7 @@ class H5_DLLCPP EnumType : public DataType { ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("EnumType"); } @@ -82,7 +82,7 @@ class H5_DLLCPP EnumType : public DataType { // Copy constructor: same as the original EnumType. EnumType(const EnumType &original); - virtual ~EnumType(); + virtual ~EnumType() H5_OVERRIDE; }; // end of EnumType } // namespace H5 diff --git a/c++/src/H5FaccProp.h b/c++/src/H5FaccProp.h index 998f870..53c7799 100644 --- a/c++/src/H5FaccProp.h +++ b/c++/src/H5FaccProp.h @@ -137,7 +137,7 @@ class H5_DLLCPP FileAccPropList : public PropList { ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("FileAccPropList"); } @@ -150,7 +150,7 @@ class H5_DLLCPP FileAccPropList : public PropList { FileAccPropList(const hid_t plist_id); // Noop destructor - virtual ~FileAccPropList(); + virtual ~FileAccPropList() H5_OVERRIDE; #ifndef DOXYGEN_SHOULD_SKIP_THIS diff --git a/c++/src/H5FcreatProp.h b/c++/src/H5FcreatProp.h index 00ae0b1..65daf8f 100644 --- a/c++/src/H5FcreatProp.h +++ b/c++/src/H5FcreatProp.h @@ -78,7 +78,7 @@ class H5_DLLCPP FileCreatPropList : public PropList { ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("FileCreatPropList"); } @@ -91,7 +91,7 @@ class H5_DLLCPP FileCreatPropList : public PropList { FileCreatPropList(const hid_t plist_id); // Noop destructor - virtual ~FileCreatPropList(); + virtual ~FileCreatPropList() H5_OVERRIDE; #ifndef DOXYGEN_SHOULD_SKIP_THIS diff --git a/c++/src/H5File.h b/c++/src/H5File.h index 6126eec..bdd7b84 100644 --- a/c++/src/H5File.h +++ b/c++/src/H5File.h @@ -117,7 +117,7 @@ class H5_DLLCPP H5File : public Group { virtual hid_t getId() const H5_OVERRIDE; // H5File destructor. - virtual ~H5File(); + virtual ~H5File() H5_OVERRIDE; protected: #ifndef DOXYGEN_SHOULD_SKIP_THIS diff --git a/c++/src/H5FloatType.h b/c++/src/H5FloatType.h index c76be95..e8df757 100644 --- a/c++/src/H5FloatType.h +++ b/c++/src/H5FloatType.h @@ -36,7 +36,7 @@ class H5_DLLCPP FloatType : public AtomType { // Returns an FloatType object via DataType* by decoding the // binary object description of this type. - virtual DataType *decode() const; + virtual DataType *decode() const H5_OVERRIDE; // Retrieves the exponent bias of a floating-point type. size_t getEbias() const; @@ -64,7 +64,7 @@ class H5_DLLCPP FloatType : public AtomType { ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("FloatType"); } @@ -79,7 +79,7 @@ class H5_DLLCPP FloatType : public AtomType { FloatType(const FloatType &original); // Noop destructor. - virtual ~FloatType(); + virtual ~FloatType() H5_OVERRIDE; }; // end of FloatType } // namespace H5 diff --git a/c++/src/H5IntType.h b/c++/src/H5IntType.h index 185c8f0..f0f30ac 100644 --- a/c++/src/H5IntType.h +++ b/c++/src/H5IntType.h @@ -36,7 +36,7 @@ class H5_DLLCPP IntType : public AtomType { // Returns an IntType object via DataType* by decoding the // binary object description of this type. - virtual DataType *decode() const; + virtual DataType *decode() const H5_OVERRIDE; // Retrieves the sign type for an integer type H5T_sign_t getSign() const; @@ -46,7 +46,7 @@ class H5_DLLCPP IntType : public AtomType { ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("IntType"); } @@ -61,7 +61,7 @@ class H5_DLLCPP IntType : public AtomType { IntType(const IntType &original); // Noop destructor. - virtual ~IntType(); + virtual ~IntType() H5_OVERRIDE; }; // end of IntType } // namespace H5 diff --git a/c++/src/H5LaccProp.h b/c++/src/H5LaccProp.h index 4fa516c..65a9673 100644 --- a/c++/src/H5LaccProp.h +++ b/c++/src/H5LaccProp.h @@ -32,7 +32,7 @@ class H5_DLLCPP LinkAccPropList : public PropList { ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("LinkAccPropList"); } @@ -52,7 +52,7 @@ class H5_DLLCPP LinkAccPropList : public PropList { size_t getNumLinks() const; // Noop destructor - virtual ~LinkAccPropList(); + virtual ~LinkAccPropList() H5_OVERRIDE; #ifndef DOXYGEN_SHOULD_SKIP_THIS diff --git a/c++/src/H5LcreatProp.h b/c++/src/H5LcreatProp.h index aea38e7..c0c66a4 100644 --- a/c++/src/H5LcreatProp.h +++ b/c++/src/H5LcreatProp.h @@ -32,7 +32,7 @@ class H5_DLLCPP LinkCreatPropList : public PropList { ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("LinkCreatPropList"); } @@ -59,7 +59,7 @@ class H5_DLLCPP LinkCreatPropList : public PropList { H5T_cset_t getCharEncoding() const; // Noop destructor - virtual ~LinkCreatPropList(); + virtual ~LinkCreatPropList() H5_OVERRIDE; #ifndef DOXYGEN_SHOULD_SKIP_THIS diff --git a/c++/src/H5Location.cpp b/c++/src/H5Location.cpp index 46f47bb..065de0c 100644 --- a/c++/src/H5Location.cpp +++ b/c++/src/H5Location.cpp @@ -2158,6 +2158,7 @@ H5Location::childObjType(const char *objname) const break; case H5O_TYPE_UNKNOWN: case H5O_TYPE_NTYPES: + case H5O_TYPE_MAP: default: throwException("childObjType", "Unknown type of object"); } @@ -2236,6 +2237,7 @@ H5Location::childObjType(hsize_t index, H5_index_t index_type, H5_iter_order_t o break; case H5O_TYPE_UNKNOWN: case H5O_TYPE_NTYPES: + case H5O_TYPE_MAP: default: throwException("childObjType", "Unknown type of object"); } diff --git a/c++/src/H5OcreatProp.h b/c++/src/H5OcreatProp.h index 7f6d411..0aa825b 100644 --- a/c++/src/H5OcreatProp.h +++ b/c++/src/H5OcreatProp.h @@ -44,7 +44,7 @@ class H5_DLLCPP ObjCreatPropList : public PropList { ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("ObjCreatPropList"); } @@ -57,7 +57,7 @@ class H5_DLLCPP ObjCreatPropList : public PropList { ObjCreatPropList(const hid_t plist_id); // Noop destructor - virtual ~ObjCreatPropList(); + virtual ~ObjCreatPropList() H5_OVERRIDE; #ifndef DOXYGEN_SHOULD_SKIP_THIS diff --git a/c++/src/H5PredType.h b/c++/src/H5PredType.h index b40d2b3..c4ac6b2 100644 --- a/c++/src/H5PredType.h +++ b/c++/src/H5PredType.h @@ -29,7 +29,7 @@ class H5_DLLCPP PredType : public AtomType { public: ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("PredType"); } @@ -42,7 +42,7 @@ class H5_DLLCPP PredType : public AtomType { PredType(const PredType &original); // Noop destructor - virtual ~PredType(); + virtual ~PredType() H5_OVERRIDE; /*! \brief This dummy function do not inherit from DataType - it will throw a DataTypeIException if invoked. diff --git a/c++/src/H5PropList.cpp b/c++/src/H5PropList.cpp index 2c80255..3df403b 100644 --- a/c++/src/H5PropList.cpp +++ b/c++/src/H5PropList.cpp @@ -152,6 +152,8 @@ PropList::PropList(const hid_t plist_id) : IdComponent() case H5I_ERROR_STACK: case H5I_NTYPES: case H5I_UNINIT: + case H5I_MAP: + case H5I_SPACE_SEL_ITER: default: id = H5P_DEFAULT; break; diff --git a/c++/src/H5PropList.h b/c++/src/H5PropList.h index 12c8b4b..2df326b 100644 --- a/c++/src/H5PropList.h +++ b/c++/src/H5PropList.h @@ -38,7 +38,7 @@ class H5_DLLCPP PropList : public IdComponent { bool operator==(const PropList &rhs) const; // Close this property list. - virtual void close(); + virtual void close() H5_OVERRIDE; // Close a property list class. void closeClass() const; @@ -102,7 +102,7 @@ class H5_DLLCPP PropList : public IdComponent { ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("PropList"); } @@ -114,10 +114,10 @@ class H5_DLLCPP PropList : public IdComponent { PropList(const PropList &original); // Gets the property list id. - virtual hid_t getId() const; + virtual hid_t getId() const H5_OVERRIDE; // Destructor: properly terminates access to this property list. - virtual ~PropList(); + virtual ~PropList() H5_OVERRIDE; #ifndef DOXYGEN_SHOULD_SKIP_THIS @@ -128,7 +128,7 @@ class H5_DLLCPP PropList : public IdComponent { hid_t id; // HDF5 property list id // Sets the property list id. - virtual void p_setId(const hid_t new_id); + virtual void p_setId(const hid_t new_id) H5_OVERRIDE; private: static PropList *DEFAULT_; diff --git a/c++/src/H5StrType.h b/c++/src/H5StrType.h index d272c53..3e4013a 100644 --- a/c++/src/H5StrType.h +++ b/c++/src/H5StrType.h @@ -42,7 +42,7 @@ class H5_DLLCPP StrType : public AtomType { // Returns an StrType object via DataType* by decoding the // binary object description of this type. - virtual DataType *decode() const; + virtual DataType *decode() const H5_OVERRIDE; // Retrieves the character set type of this string datatype. H5T_cset_t getCset() const; @@ -58,7 +58,7 @@ class H5_DLLCPP StrType : public AtomType { ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("StrType"); } @@ -73,7 +73,7 @@ class H5_DLLCPP StrType : public AtomType { StrType(const StrType &original); // Noop destructor. - virtual ~StrType(); + virtual ~StrType() H5_OVERRIDE; }; // end of StrType } // namespace H5 diff --git a/c++/src/H5VarLenType.h b/c++/src/H5VarLenType.h index f767e0e..583b9cd 100644 --- a/c++/src/H5VarLenType.h +++ b/c++/src/H5VarLenType.h @@ -33,11 +33,11 @@ class H5_DLLCPP VarLenType : public DataType { // Returns an VarLenType object via DataType* by decoding the // binary object description of this type. - virtual DataType *decode() const; + virtual DataType *decode() const H5_OVERRIDE; ///\brief Returns this class name. virtual H5std_string - fromClass() const + fromClass() const H5_OVERRIDE { return ("VarLenType"); } @@ -53,7 +53,7 @@ class H5_DLLCPP VarLenType : public DataType { VarLenType(const H5Location &loc, const H5std_string &name); // Noop destructor - virtual ~VarLenType(); + virtual ~VarLenType() H5_OVERRIDE; // Default constructor VarLenType(); diff --git a/c++/test/ttypes.cpp b/c++/test/ttypes.cpp index b633740..7d0337d 100644 --- a/c++/test/ttypes.cpp +++ b/c++/test/ttypes.cpp @@ -656,7 +656,6 @@ static void test_named() { static hsize_t ds_size[2] = {10, 20}; - hsize_t i; unsigned attr_data[10][20]; DataType * ds_type = NULL; @@ -726,8 +725,11 @@ test_named() // It should be possible to define an attribute for the named type Attribute attr1 = itype.createAttribute("attr1", PredType::NATIVE_UCHAR, space); - for (i = 0; i < ds_size[0] * ds_size[1]; i++) - attr_data[0][i] = (int)i; /*tricky*/ + for (hsize_t i = 0; i < ds_size[0]; i++) { + for (hsize_t j = 0; j < ds_size[1]; j++) { + attr_data[i][j] = (unsigned)(i * ds_size[1] + j); + } + } attr1.write(PredType::NATIVE_UINT, attr_data); attr1.close(); diff --git a/config/cmake/H5pubconf.h.in b/config/cmake/H5pubconf.h.in index bf24776..d757158 100644 --- a/config/cmake/H5pubconf.h.in +++ b/config/cmake/H5pubconf.h.in @@ -243,21 +243,9 @@ /* Define to 1 if you have the `z' library (-lz). */ #cmakedefine H5_HAVE_LIBZ @H5_HAVE_LIBZ@ -/* Define to 1 if you have the `llround' function. */ -#cmakedefine H5_HAVE_LLROUND @H5_HAVE_LLROUND@ - -/* Define to 1 if you have the `llroundf' function. */ -#cmakedefine H5_HAVE_LLROUNDF @H5_HAVE_LLROUNDF@ - /* Define to 1 if you have the `longjmp' function. */ #cmakedefine H5_HAVE_LONGJMP @H5_HAVE_LONGJMP@ -/* Define to 1 if you have the `lround' function. */ -#cmakedefine H5_HAVE_LROUND @H5_HAVE_LROUND@ - -/* Define to 1 if you have the `lroundf' function. */ -#cmakedefine H5_HAVE_LROUNDF @H5_HAVE_LROUNDF@ - /* Define to 1 if you have the `lseek64' function. */ #cmakedefine H5_HAVE_LSEEK64 @H5_HAVE_LSEEK64@ @@ -322,12 +310,6 @@ compiled */ #cmakedefine H5_HAVE_ROS3_VFD @H5_HAVE_ROS3_VFD@ -/* Define to 1 if you have the `round' function. */ -#cmakedefine H5_HAVE_ROUND @H5_HAVE_ROUND@ - -/* Define to 1 if you have the `roundf' function. */ -#cmakedefine H5_HAVE_ROUNDF @H5_HAVE_ROUNDF@ - /* Define to 1 if you have the `setjmp' function. */ #cmakedefine H5_HAVE_SETJMP @H5_HAVE_SETJMP@ @@ -787,19 +769,10 @@ /* Define for large files, on AIX-style hosts. */ #cmakedefine H5__LARGE_FILES -/* Define to empty if `const' does not conform to ANSI C. */ -#cmakedefine H5_const - /* Define to `long int' if <sys/types.h> does not define. */ #cmakedefine H5_off_t /* Define to `long' if <sys/types.h> does not define. */ -#cmakedefine H5_ptrdiff_t - -/* Define to `unsigned long' if <sys/types.h> does not define. */ -#cmakedefine H5_size_t - -/* Define to `long' if <sys/types.h> does not define. */ #cmakedefine H5_ssize_t #endif diff --git a/config/cmake/cacheinit.cmake b/config/cmake/cacheinit.cmake index fc85277..e423deb 100644 --- a/config/cmake/cacheinit.cmake +++ b/config/cmake/cacheinit.cmake @@ -21,6 +21,8 @@ set (HDF_PACKAGE_EXT "" CACHE STRING "Name of HDF package extension" FORCE) set (HDF_PACKAGE_NAMESPACE "hdf5::" CACHE STRING "Name for HDF package namespace (can be empty)" FORCE) +set (HDF5_BUILD_CPP_LIB ON CACHE BOOL "Build C++ support" FORCE) + set (HDF5_BUILD_FORTRAN ON CACHE BOOL "Build FORTRAN support" FORCE) set (HDF5_INSTALL_MOD_FORTRAN "NO" CACHE STRING "Copy FORTRAN mod files to include directory (NO SHARED STATIC)" FORCE) diff --git a/config/cmake_ext_mod/ConfigureChecks.cmake b/config/cmake_ext_mod/ConfigureChecks.cmake index 4b11f51..105e0e7 100644 --- a/config/cmake_ext_mod/ConfigureChecks.cmake +++ b/config/cmake_ext_mod/ConfigureChecks.cmake @@ -500,18 +500,12 @@ CHECK_FUNCTION_EXISTS (frexpl ${HDF_PREFIX}_HAVE_FREXPL) CHECK_FUNCTION_EXISTS (gethostname ${HDF_PREFIX}_HAVE_GETHOSTNAME) CHECK_FUNCTION_EXISTS (getrusage ${HDF_PREFIX}_HAVE_GETRUSAGE) -CHECK_FUNCTION_EXISTS (llround ${HDF_PREFIX}_HAVE_LLROUND) -CHECK_FUNCTION_EXISTS (llroundf ${HDF_PREFIX}_HAVE_LLROUNDF) -CHECK_FUNCTION_EXISTS (lround ${HDF_PREFIX}_HAVE_LROUND) -CHECK_FUNCTION_EXISTS (lroundf ${HDF_PREFIX}_HAVE_LROUNDF) CHECK_FUNCTION_EXISTS (lstat ${HDF_PREFIX}_HAVE_LSTAT) CHECK_FUNCTION_EXISTS (pread ${HDF_PREFIX}_HAVE_PREAD) CHECK_FUNCTION_EXISTS (pwrite ${HDF_PREFIX}_HAVE_PWRITE) CHECK_FUNCTION_EXISTS (rand_r ${HDF_PREFIX}_HAVE_RAND_R) CHECK_FUNCTION_EXISTS (random ${HDF_PREFIX}_HAVE_RANDOM) -CHECK_FUNCTION_EXISTS (round ${HDF_PREFIX}_HAVE_ROUND) -CHECK_FUNCTION_EXISTS (roundf ${HDF_PREFIX}_HAVE_ROUNDF) CHECK_FUNCTION_EXISTS (setsysinfo ${HDF_PREFIX}_HAVE_SETSYSINFO) CHECK_FUNCTION_EXISTS (signal ${HDF_PREFIX}_HAVE_SIGNAL) diff --git a/config/gnu-cxxflags b/config/gnu-cxxflags index 67f925c..cba8298 100644 --- a/config/gnu-cxxflags +++ b/config/gnu-cxxflags @@ -144,6 +144,15 @@ if test "X-g++" = "X-$cxx_vendor"; then DEBUG_CXXFLAGS="-ftrapv -fno-common" fi + ######################## + # Enhanced Diagnostics # + ######################## + + if test $cxx_vers_major -ge 10; then + NO_DIAGS_CXXFLAGS="-fdiagnostics-urls=never -fno-diagnostics-color" + fi + DIAGS_CXXFLAGS= + ########### # Symbols # ########### diff --git a/config/gnu-fflags b/config/gnu-fflags index 51895ed..ec4fcab 100644 --- a/config/gnu-fflags +++ b/config/gnu-fflags @@ -105,6 +105,15 @@ if test "X-gfortran" = "X-$f9x_vendor"; then DEBUG_FCFLAGS="-fbounds-check" fi + ######################## + # Enhanced Diagnostics # + ######################## + + if test $f9x_vers_major -ge 10; then + NO_DIAGS_FCFLAGS="-fdiagnostics-urls=never -fno-diagnostics-color" + fi + DIAGS_FCFLAGS= + ########### # Symbols # ########### diff --git a/config/gnu-flags b/config/gnu-flags index 89d27d6..01533de 100644 --- a/config/gnu-flags +++ b/config/gnu-flags @@ -158,6 +158,15 @@ if test "X-gcc" = "X-$cc_vendor"; then DEBUG_CFLAGS="-ftrapv -fno-common" fi + ######################## + # Enhanced Diagnostics # + ######################## + + if test $cc_vers_major -ge 10; then + NO_DIAGS_CFLAGS="-fdiagnostics-urls=never -fno-diagnostics-color" + fi + DIAGS_CFLAGS= + ########### # Symbols # ########### diff --git a/config/gnu-warnings/error-general b/config/gnu-warnings/error-general index 4358b20..8405c40 100644 --- a/config/gnu-warnings/error-general +++ b/config/gnu-warnings/error-general @@ -3,7 +3,6 @@ # circumstances, so ask the compiler to treat them as errors: # -Werror=bad-function-cast --Werror=declaration-after-statement -Werror=implicit-function-declaration -Werror=missing-declarations -Werror=missing-prototypes diff --git a/config/gnu-warnings/noerror-general b/config/gnu-warnings/noerror-general index e19014f..31194d3 100644 --- a/config/gnu-warnings/noerror-general +++ b/config/gnu-warnings/noerror-general @@ -3,7 +3,6 @@ # circumstances, so ask the compiler to treat them as errors: # -Wbad-function-cast --Wdeclaration-after-statement -Wimplicit-function-declaration -Wmissing-declarations -Wmissing-prototypes diff --git a/configure.ac b/configure.ac index 2b8bb69..cb6d431 100644 --- a/configure.ac +++ b/configure.ac @@ -95,12 +95,12 @@ AC_CONFIG_COMMANDS([pubconf], [ sed 's/#define /#define H5_/' <src/H5config.h |\ sed 's/#undef /#undef H5_/' >pubconf if test ! -f src/H5pubconf.h; then - /bin/mv -f pubconf src/H5pubconf.h + mv -f pubconf src/H5pubconf.h elif (diff pubconf src/H5pubconf.h >/dev/null); then rm -f pubconf echo "src/H5pubconf.h is unchanged" else - /bin/mv -f pubconf src/H5pubconf.h + mv -f pubconf src/H5pubconf.h fi echo "Post process src/libhdf5.settings" sed '/^#/d' < src/libhdf5.settings > libhdf5.settings.TMP @@ -2094,6 +2094,51 @@ AC_ARG_ENABLE([production], ## ---------------------------------------------------------------------- +## Check if the compiler should include build diagnostics +## +AC_MSG_CHECKING([enable build diagnostics]) +AC_ARG_ENABLE([diags], + [AS_HELP_STRING([--enable-diags=(yes|no|<custom>)], + [Allow default enhanced diagnostics to the build. + This is independent of the build mode and optimization + level. + [default=no] + ])], + [DIAGS=$enableval]) + +## Set default +if test "X-$DIAGS" = X- ; then + DIAGS=no +fi + +## Allow this variable to be substituted in +## other files (src/libhdf5.settings.in, etc.) +AC_SUBST([DIAGS]) + +case "X-$DIAGS" in + X-yes) + H5_CFLAGS="$H5_CFLAGS $DIAGS_CFLAGS" + H5_CXXFLAGS="$H5_CXXFLAGS $DIAGS_CXXFLAGS" + H5_FCFLAGS="$H5_FCFLAGS $DIAGS_FCFLAGS" + AC_MSG_RESULT([yes]) + ;; + X-no) + H5_CFLAGS="$H5_CFLAGS $NO_DIAGS_CFLAGS" + H5_CXXFLAGS="$H5_CXXFLAGS $NO_DIAGS_CXXFLAGS" + H5_FCFLAGS="$H5_FCFLAGS $NO_DIAGS_FCFLAGS" + AC_MSG_RESULT([no]) + ;; + *) + H5_CFLAGS="$H5_CFLAGS $DIAGS" + H5_CXXFLAGS="$H5_CXXFLAGS $DIAGS" + H5_FCFLAGS="$H5_FCFLAGS $DIAGS" + DIAGS="custom ($DIAGS)" + AC_MSG_RESULT([$DIAGS]) + ;; +esac + + +## ---------------------------------------------------------------------- ## Check if the compiler should include symbols ## AC_MSG_CHECKING([enable debugging symbols]) @@ -2207,10 +2252,6 @@ if test "X-$DEV_WARNINGS" = X- ; then DEV_WARNINGS=no fi -## Allow this variable to be substituted in -## other files (src/libhdf5.settings.in, etc.) -AC_SUBST([DEV_WARNINGS]) - case "X-$DEV_WARNINGS" in X-yes) H5_CFLAGS="$H5_CFLAGS $DEVELOPER_WARNING_CFLAGS" diff --git a/fortran/src/CMakeLists.txt b/fortran/src/CMakeLists.txt index 37b5157..7a39abf 100644 --- a/fortran/src/CMakeLists.txt +++ b/fortran/src/CMakeLists.txt @@ -73,38 +73,35 @@ add_executable (H5match_types ) target_include_directories (H5match_types PRIVATE "${HDF5_SRC_BINARY_DIR};${HDF5_SRC_DIR};${HDF5_F90_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") -add_custom_command ( - OUTPUT ${HDF5_F90_BINARY_DIR}/H5f90i_gen.h - ${HDF5_F90_BINARY_DIR}/H5fortran_types.F90 +add_custom_command (TARGET H5match_types POST_BUILD + BYPRODUCTS H5f90i_gen.h H5fortran_types.F90 COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:H5match_types> WORKING_DIRECTORY ${HDF5_F90_BINARY_DIR} DEPENDS H5match_types ) if (NOT ONLY_SHARED_LIBS) - add_custom_command ( - OUTPUT ${HDF5_F90_BINARY_DIR}/static/H5f90i_gen.h - ${HDF5_F90_BINARY_DIR}/static/H5fortran_types.F90 + add_custom_command (TARGET H5match_types POST_BUILD + BYPRODUCTS H5f90i_gen.h H5fortran_types.F90 COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different "${HDF5_F90_BINARY_DIR}/H5f90i_gen.h" "${HDF5_F90_BINARY_DIR}/static/H5f90i_gen.h" + ARGS -E copy_if_different ${HDF5_F90_BINARY_DIR}/H5f90i_gen.h ${HDF5_F90_BINARY_DIR}/static/H5f90i_gen.h COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different "${HDF5_F90_BINARY_DIR}/H5fortran_types.F90" "${HDF5_F90_BINARY_DIR}/static/H5fortran_types.F90" + ARGS -E copy_if_different ${HDF5_F90_BINARY_DIR}/H5fortran_types.F90 ${HDF5_F90_BINARY_DIR}/static/H5fortran_types.F90 WORKING_DIRECTORY ${HDF5_F90_BINARY_DIR}/static - DEPENDS ${HDF5_F90_BINARY_DIR}/H5f90i_gen.h + DEPENDS H5_buildiface H5match_types ${HDF5_F90_BINARY_DIR}/H5f90i_gen.h ) set_source_files_properties (${HDF5_F90_BINARY_DIR}/static/H5f90i_gen.h PROPERTIES GENERATED TRUE) set_source_files_properties (${HDF5_F90_BINARY_DIR}/static/H5fortran_types.F90 PROPERTIES GENERATED TRUE) endif () if (BUILD_SHARED_LIBS) - add_custom_command ( - OUTPUT ${HDF5_F90_BINARY_DIR}/shared/H5f90i_gen.h - ${HDF5_F90_BINARY_DIR}/shared/H5fortran_types.F90 + add_custom_command (TARGET H5match_types POST_BUILD + BYPRODUCTS H5f90i_gen.h H5fortran_types.F90 COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different "${HDF5_F90_BINARY_DIR}/H5f90i_gen.h" "${HDF5_F90_BINARY_DIR}/shared/H5f90i_gen.h" + ARGS -E copy_if_different ${HDF5_F90_BINARY_DIR}/H5f90i_gen.h ${HDF5_F90_BINARY_DIR}/shared/H5f90i_gen.h COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different "${HDF5_F90_BINARY_DIR}/H5fortran_types.F90" "${HDF5_F90_BINARY_DIR}/shared/H5fortran_types.F90" + ARGS -E copy_if_different ${HDF5_F90_BINARY_DIR}/H5fortran_types.F90 ${HDF5_F90_BINARY_DIR}/shared/H5fortran_types.F90 WORKING_DIRECTORY ${HDF5_F90_BINARY_DIR}/shared - DEPENDS ${HDF5_F90_BINARY_DIR}/H5f90i_gen.h + DEPENDS H5_buildiface H5match_types ${HDF5_F90_BINARY_DIR}/H5f90i_gen.h ) set_source_files_properties (${HDF5_F90_BINARY_DIR}/shared/H5f90i_gen.h PROPERTIES GENERATED TRUE) set_source_files_properties (${HDF5_F90_BINARY_DIR}/shared/H5fortran_types.F90 PROPERTIES GENERATED TRUE) @@ -134,16 +131,29 @@ set (f90CStub_C_SOURCES set_source_files_properties (${f90CStub_C_SOURCES} PROPERTIES LANGUAGE C) set (f90CStub_C_HDRS + ${HDF5_F90_SRC_SOURCE_DIR}/H5f90.h + ${HDF5_F90_SRC_SOURCE_DIR}/H5f90i.h + ${HDF5_F90_SRC_SOURCE_DIR}/H5f90proto.h +) + +set (f90CStub_CGEN_HDRS # generated files ${HDF5_F90_BINARY_DIR}/static/H5f90i_gen.h ) -set (f90CStub_C_SHHDRS +add_custom_target (H5gen_i ALL + DEPENDS H5match_types ${f90CStub_CGEN_HDRS} +) + +set (f90CStub_CGEN_SHHDRS # generated files ${HDF5_F90_BINARY_DIR}/shared/H5f90i_gen.h ) +add_custom_target (H5gen_iSH ALL + DEPENDS H5match_types ${f90CStub_CGEN_SHHDRS} +) if (NOT ONLY_SHARED_LIBS) - add_library (${HDF5_F90_C_LIB_TARGET} STATIC ${f90CStub_C_SOURCES} ${f90CStub_C_HDRS}) + add_library (${HDF5_F90_C_LIB_TARGET} STATIC ${f90CStub_C_SOURCES} ${f90CStub_C_HDRS} ${f90CStub_CGEN_HDRS}) target_include_directories (${HDF5_F90_C_LIB_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};${HDF5_F90_BINARY_DIR};${HDF5_F90_BINARY_DIR}/static;$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>" INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>" @@ -157,11 +167,12 @@ if (NOT ONLY_SHARED_LIBS) FOLDER libraries/fortran LINKER_LANGUAGE C ) + add_dependencies (${HDF5_F90_C_LIB_TARGET} H5gen_i) set (install_targets ${HDF5_F90_C_LIB_TARGET}) endif () if (BUILD_SHARED_LIBS) - add_library (${HDF5_F90_C_LIBSH_TARGET} SHARED ${f90CStub_C_SOURCES} ${f90CStub_C_SHHDRS}) + add_library (${HDF5_F90_C_LIBSH_TARGET} SHARED ${f90CStub_C_SOURCES} ${f90CStub_C_HDRS} ${f90CStub_CGEN_SHHDRS}) target_include_directories (${HDF5_F90_C_LIBSH_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};${HDF5_F90_BINARY_DIR};${HDF5_F90_BINARY_DIR}/shared;$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>" INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>" @@ -176,6 +187,7 @@ if (BUILD_SHARED_LIBS) FOLDER libraries/fortran LINKER_LANGUAGE C ) + add_dependencies (${HDF5_F90_C_LIBSH_TARGET} H5gen_iSH) set (install_targets ${install_targets} ${HDF5_F90_C_LIBSH_TARGET}) endif () @@ -210,39 +222,39 @@ set (f90_F_GEN_SOURCES ${HDF5_F90_SRC_SOURCE_DIR}/H5Dff.F90 ${HDF5_F90_SRC_SOURCE_DIR}/H5Pff.F90 ) -add_custom_command ( - OUTPUT ${HDF5_F90_BINARY_DIR}/H5_gen.F90 +add_custom_command (TARGET H5_buildiface POST_BUILD + BYPRODUCTS ${HDF5_F90_BINARY_DIR}/H5_gen.F90 COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:H5_buildiface> WORKING_DIRECTORY ${HDF5_F90_BINARY_DIR} - DEPENDS ${f90_F_GEN_SOURCES} + DEPENDS H5_buildiface ${f90_F_GEN_SOURCES} COMMENT "Generating the H5_gen.F90 file" ) if (NOT ONLY_SHARED_LIBS) - add_custom_command ( - OUTPUT ${HDF5_F90_BINARY_DIR}/static/H5_gen.F90 + add_custom_command (TARGET H5_buildiface POST_BUILD + BYPRODUCTS H5_gen.F90 COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different "${HDF5_F90_BINARY_DIR}/H5_gen.F90" "${HDF5_F90_BINARY_DIR}/static/H5_gen.F90" + ARGS -E copy_if_different ${HDF5_F90_BINARY_DIR}/H5_gen.F90 ${HDF5_F90_BINARY_DIR}/static/H5_gen.F90 WORKING_DIRECTORY ${HDF5_F90_BINARY_DIR}/static - DEPENDS ${HDF5_F90_BINARY_DIR}/H5_gen.F90 + DEPENDS H5_buildiface ${HDF5_F90_BINARY_DIR}/H5_gen.F90 COMMENT "Generating the H5_gen.F90 file" ) add_custom_target (H5gen ALL - DEPENDS ${HDF5_F90_BINARY_DIR}/static/H5_gen.F90 + DEPENDS H5_buildiface ${HDF5_F90_BINARY_DIR}/static/H5_gen.F90 ) set_source_files_properties (${HDF5_F90_BINARY_DIR}/static/H5_gen.F90 PROPERTIES GENERATED TRUE) endif () if (BUILD_SHARED_LIBS) - add_custom_command ( - OUTPUT ${HDF5_F90_BINARY_DIR}/shared/H5_gen.F90 + add_custom_command (TARGET H5_buildiface POST_BUILD + BYPRODUCTS H5_gen.F90 COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different "${HDF5_F90_BINARY_DIR}/H5_gen.F90" "${HDF5_F90_BINARY_DIR}/shared/H5_gen.F90" + ARGS -E copy_if_different ${HDF5_F90_BINARY_DIR}/H5_gen.F90 ${HDF5_F90_BINARY_DIR}/shared/H5_gen.F90 WORKING_DIRECTORY ${HDF5_F90_BINARY_DIR}/shared DEPENDS ${HDF5_F90_BINARY_DIR}/H5_gen.F90 COMMENT "Generating the H5_gen.F90 shared file" ) add_custom_target (H5genSH ALL - DEPENDS ${HDF5_F90_BINARY_DIR}/shared/H5_gen.F90 + DEPENDS H5_buildiface ${HDF5_F90_BINARY_DIR}/shared/H5_gen.F90 ) set_source_files_properties (${HDF5_F90_BINARY_DIR}/shared/H5_gen.F90 PROPERTIES GENERATED TRUE) endif () @@ -550,7 +562,11 @@ install ( ) if (NOT WIN32 AND NOT MINGW) - set (_PKG_CONFIG_COMPILER ${CMAKE_Fortran_COMPILER}) + if (HDF5_ENABLE_PARALLEL AND MPI_Fortran_FOUND) + set (_PKG_CONFIG_COMPILER ${MPI_Fortran_COMPILER}) + else () + set (_PKG_CONFIG_COMPILER ${CMAKE_Fortran_COMPILER}) + endif () configure_file ( ${HDF_RESOURCES_DIR}/libh5cc.in ${HDF5_BINARY_DIR}/CMakeFiles/h5fc diff --git a/fortran/test/CMakeLists.txt b/fortran/test/CMakeLists.txt index 40aef6d..147746c 100644 --- a/fortran/test/CMakeLists.txt +++ b/fortran/test/CMakeLists.txt @@ -91,27 +91,27 @@ if (HDF5_ENABLE_FORMATTERS) endif () if (NOT BUILD_SHARED_LIBS) - add_custom_command ( - OUTPUT ${HDF5_FORTRAN_TESTS_BINARY_DIR}/static/tf_gen.F90 + add_custom_command (TARGET H5_test_buildiface POST_BUILD + BYPRODUCTS tf_gen.F90 COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:H5_test_buildiface> WORKING_DIRECTORY ${HDF5_FORTRAN_TESTS_BINARY_DIR}/static DEPENDS H5_test_buildiface - COMMENT "Generating the tf_gen.F90 file" + COMMENT "Generating the tf_gen.F90 static file" ) add_custom_target (H5testgen ALL - DEPENDS ${HDF5_FORTRAN_TESTS_BINARY_DIR}/static/tf_gen.F90 + DEPENDS H5_test_buildiface ${HDF5_FORTRAN_TESTS_BINARY_DIR}/static/tf_gen.F90 ) set_source_files_properties (${HDF5_FORTRAN_TESTS_BINARY_DIR}/static/tf_gen.F90 PROPERTIES GENERATED TRUE) else () - add_custom_command ( - OUTPUT ${HDF5_FORTRAN_TESTS_BINARY_DIR}/shared/tf_gen.F90 + add_custom_command (TARGET H5_test_buildiface POST_BUILD + BYPRODUCTS tf_gen.F90 COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:H5_test_buildiface> WORKING_DIRECTORY ${HDF5_FORTRAN_TESTS_BINARY_DIR}/shared DEPENDS H5_test_buildiface COMMENT "Generating the tf_gen.F90 shared file" ) add_custom_target (H5testgenSH ALL - DEPENDS ${HDF5_FORTRAN_TESTS_BINARY_DIR}/shared/tf_gen.F90 + DEPENDS H5_test_buildiface ${HDF5_FORTRAN_TESTS_BINARY_DIR}/shared/tf_gen.F90 ) set_source_files_properties (${HDF5_FORTRAN_TESTS_BINARY_DIR}/shared/tf_gen.F90 PROPERTIES GENERATED TRUE) endif () diff --git a/hl/c++/src/CMakeLists.txt b/hl/c++/src/CMakeLists.txt index 1eac9fe..e488656 100644 --- a/hl/c++/src/CMakeLists.txt +++ b/hl/c++/src/CMakeLists.txt @@ -120,7 +120,11 @@ install ( ) if (NOT WIN32 AND NOT MINGW) - set (_PKG_CONFIG_COMPILER ${CMAKE_CXX_COMPILER}) + if (HDF5_ENABLE_PARALLEL AND MPI_CXX_FOUND) + set (_PKG_CONFIG_COMPILER ${MPI_CXX_COMPILER}) + else () + set (_PKG_CONFIG_COMPILER ${CMAKE_CXX_COMPILER}) + endif () configure_file ( ${HDF_RESOURCES_DIR}/libh5cc.in ${HDF5_BINARY_DIR}/CMakeFiles/h5hlc++ diff --git a/hl/c++/src/H5PacketTable.h b/hl/c++/src/H5PacketTable.h index a73b4c9..acd0ccf 100644 --- a/hl/c++/src/H5PacketTable.h +++ b/hl/c++/src/H5PacketTable.h @@ -35,7 +35,7 @@ class H5_HLCPPDLL PacketTable { */ PacketTable() { - table_id = H5I_BADID; + table_id = H5I_INVALID_HID; } /* "Open" Constructor diff --git a/hl/fortran/src/CMakeLists.txt b/hl/fortran/src/CMakeLists.txt index 0b7795b..4f0b451 100644 --- a/hl/fortran/src/CMakeLists.txt +++ b/hl/fortran/src/CMakeLists.txt @@ -114,15 +114,15 @@ set (HDF5_HL_F90_F_BASE_SOURCES ) if (NOT ONLY_SHARED_LIBS) - add_custom_command ( - OUTPUT ${HDF5_HL_F90_BINARY_DIR}/static/H5LTff_gen.F90 ${HDF5_HL_F90_BINARY_DIR}/static/H5TBff_gen.F90 + add_custom_command (TARGET H5HL_buildiface POST_BUILD + BYPRODUCTS $H5LTff_gen.F90 H5TBff_gen.F90 COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:H5HL_buildiface> WORKING_DIRECTORY ${HDF5_HL_F90_BINARY_DIR}/static DEPENDS ${HDF5_HL_F90_F_BASE_SOURCES} COMMENT "Generating the H5LTff_gen.F90, H5TBff_gen.F90 files" ) add_custom_target (H5HLgen ALL - DEPENDS ${HDF5_HL_F90_BINARY_DIR}/static/H5LTff_gen.F90 ${HDF5_HL_F90_BINARY_DIR}/static/H5TBff_gen.F90 + DEPENDS H5HL_buildiface ${HDF5_HL_F90_BINARY_DIR}/static/H5LTff_gen.F90 ${HDF5_HL_F90_BINARY_DIR}/static/H5TBff_gen.F90 ) set_source_files_properties ( ${HDF5_HL_F90_BINARY_DIR}/static/H5LTff_gen.F90 @@ -131,15 +131,15 @@ if (NOT ONLY_SHARED_LIBS) ) endif () if (BUILD_SHARED_LIBS) - add_custom_command ( - OUTPUT ${HDF5_HL_F90_BINARY_DIR}/shared/H5LTff_gen.F90 ${HDF5_HL_F90_BINARY_DIR}/shared/H5TBff_gen.F90 + add_custom_command (TARGET H5HL_buildiface POST_BUILD + BYPRODUCTS H5LTff_gen.F90 H5TBff_gen.F90 COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:H5HL_buildiface> WORKING_DIRECTORY ${HDF5_HL_F90_BINARY_DIR}/shared DEPENDS ${HDF5_HL_F90_F_BASE_SOURCES} COMMENT "Generating the H5LTff_gen.F90, H5TBff_gen.F90 shared files" ) add_custom_target (H5HLgenSH ALL - DEPENDS ${HDF5_HL_F90_BINARY_DIR}/shared/H5LTff_gen.F90 ${HDF5_HL_F90_BINARY_DIR}/shared/H5TBff_gen.F90 + DEPENDS H5HL_buildiface ${HDF5_HL_F90_BINARY_DIR}/shared/H5LTff_gen.F90 ${HDF5_HL_F90_BINARY_DIR}/shared/H5TBff_gen.F90 ) set_source_files_properties ( ${HDF5_HL_F90_BINARY_DIR}/shared/H5LTff_gen.F90 @@ -353,7 +353,11 @@ install ( ) if (NOT WIN32 AND NOT MINGW) - set (_PKG_CONFIG_COMPILER ${CMAKE_Fortran_COMPILER}) + if (HDF5_ENABLE_PARALLEL AND MPI_Fortran_FOUND) + set (_PKG_CONFIG_COMPILER ${MPI_Fortran_COMPILER}) + else () + set (_PKG_CONFIG_COMPILER ${CMAKE_Fortran_COMPILER}) + endif () configure_file ( ${HDF_RESOURCES_DIR}/libh5cc.in ${HDF5_BINARY_DIR}/CMakeFiles/h5hlfc diff --git a/hl/src/CMakeLists.txt b/hl/src/CMakeLists.txt index 785bdcf..427424e 100644 --- a/hl/src/CMakeLists.txt +++ b/hl/src/CMakeLists.txt @@ -152,7 +152,11 @@ install ( ) if (NOT WIN32 AND NOT MINGW) - set (_PKG_CONFIG_COMPILER ${CMAKE_C_COMPILER}) + if (HDF5_ENABLE_PARALLEL AND MPI_C_FOUND) + set (_PKG_CONFIG_COMPILER ${MPI_C_COMPILER}) + else () + set (_PKG_CONFIG_COMPILER ${CMAKE_C_COMPILER}) + endif () configure_file ( ${HDF_RESOURCES_DIR}/libh5cc.in ${HDF5_BINARY_DIR}/CMakeFiles/h5hlcc diff --git a/hl/src/H5TB.c b/hl/src/H5TB.c index 1ac162f..efa61a3 100644 --- a/hl/src/H5TB.c +++ b/hl/src/H5TB.c @@ -57,11 +57,11 @@ H5TBmake_table(const char *table_title, hid_t loc_id, const char *dset_name, hsi hsize_t nrecords, size_t type_size, const char *field_names[], const size_t *field_offset, const hid_t *field_types, hsize_t chunk_size, void *fill_data, int compress, const void *buf) { - hid_t did = H5I_BADID; - hid_t sid = H5I_BADID; - hid_t mem_type_id = H5I_BADID; - hid_t plist_id = H5I_BADID; - hid_t attr_id = H5I_BADID; + hid_t did = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; + hid_t mem_type_id = H5I_INVALID_HID; + hid_t plist_id = H5I_INVALID_HID; + hid_t attr_id = H5I_INVALID_HID; hsize_t dims[1]; hsize_t dims_chunk[1]; hsize_t maxdims[1] = {H5S_UNLIMITED}; @@ -129,17 +129,17 @@ H5TBmake_table(const char *table_title, hid_t loc_id, const char *dset_name, hsi /* terminate access to the data space. */ if (H5Sclose(sid) < 0) goto out; - sid = H5I_BADID; + sid = H5I_INVALID_HID; /* end access to the dataset */ if (H5Dclose(did) < 0) goto out; - did = H5I_BADID; + did = H5I_INVALID_HID; /* end access to the property list */ if (H5Pclose(plist_id) < 0) goto out; - plist_id = H5I_BADID; + plist_id = H5I_INVALID_HID; /*------------------------------------------------------------------------- * set the conforming table attributes @@ -196,24 +196,24 @@ H5TBmake_table(const char *table_title, hid_t loc_id, const char *dset_name, hsi if (H5Aclose(attr_id) < 0) goto out; - attr_id = H5I_BADID; + attr_id = H5I_INVALID_HID; } /* end for */ /* terminate access to the data space. */ if (H5Sclose(sid) < 0) goto out; - sid = H5I_BADID; + sid = H5I_INVALID_HID; /* end access to the dataset */ if (H5Dclose(did) < 0) goto out; - did = H5I_BADID; + did = H5I_INVALID_HID; } /* end if */ /* release the datatype. */ if (H5Tclose(mem_type_id) < 0) goto out; - mem_type_id = H5I_BADID; + mem_type_id = H5I_INVALID_HID; ret_val = 0; @@ -267,9 +267,9 @@ herr_t H5TBappend_records(hid_t loc_id, const char *dset_name, hsize_t nrecords, size_t type_size, const size_t *field_offset, const size_t *field_sizes, const void *buf) { - hid_t did = H5I_BADID; - hid_t tid = H5I_BADID; - hid_t mem_type_id = H5I_BADID; + hid_t did = H5I_INVALID_HID; + hid_t tid = H5I_INVALID_HID; + hid_t mem_type_id = H5I_INVALID_HID; hsize_t nrecords_orig; hsize_t nfields; herr_t ret_val = -1; @@ -332,11 +332,11 @@ herr_t H5TBwrite_records(hid_t loc_id, const char *dset_name, hsize_t start, hsize_t nrecords, size_t type_size, const size_t *field_offset, const size_t *field_sizes, const void *buf) { - hid_t did = H5I_BADID; - hid_t tid = H5I_BADID; - hid_t sid = H5I_BADID; - hid_t m_sid = H5I_BADID; - hid_t mem_type_id = H5I_BADID; + hid_t did = H5I_INVALID_HID; + hid_t tid = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; + hid_t m_sid = H5I_INVALID_HID; + hid_t mem_type_id = H5I_INVALID_HID; hsize_t count[1]; hsize_t offset[1]; hsize_t mem_size[1]; @@ -425,14 +425,14 @@ H5TBwrite_fields_name(hid_t loc_id, const char *dset_name, const char *field_nam hsize_t nrecords, size_t type_size, const size_t *field_offset, const size_t *field_sizes, const void *buf) { - hid_t did = H5I_BADID; - hid_t tid = H5I_BADID; - hid_t write_type_id = H5I_BADID; - hid_t member_type_id = H5I_BADID; - hid_t nmtype_id = H5I_BADID; - hid_t m_sid = H5I_BADID; - hid_t file_space_id = H5I_BADID; - hid_t preserve_id = H5I_BADID; + hid_t did = H5I_INVALID_HID; + hid_t tid = H5I_INVALID_HID; + hid_t write_type_id = H5I_INVALID_HID; + hid_t member_type_id = H5I_INVALID_HID; + hid_t nmtype_id = H5I_INVALID_HID; + hid_t m_sid = H5I_INVALID_HID; + hid_t file_space_id = H5I_INVALID_HID; + hid_t preserve_id = H5I_INVALID_HID; hssize_t nfields; hssize_t i, j; hsize_t count[1]; @@ -510,10 +510,10 @@ H5TBwrite_fields_name(hid_t loc_id, const char *dset_name, const char *field_nam /* close */ if (H5Tclose(member_type_id) < 0) goto out; - member_type_id = H5I_BADID; + member_type_id = H5I_INVALID_HID; if (H5Tclose(nmtype_id) < 0) goto out; - nmtype_id = H5I_BADID; + nmtype_id = H5I_INVALID_HID; } /* end if */ H5free_memory(member_name); @@ -583,14 +583,14 @@ H5TBwrite_fields_index(hid_t loc_id, const char *dset_name, hsize_t nfields, con hsize_t start, hsize_t nrecords, size_t type_size, const size_t *field_offset, const size_t *field_sizes, const void *buf) { - hid_t did = H5I_BADID; - hid_t tid = H5I_BADID; - hid_t write_type_id = H5I_BADID; - hid_t member_type_id = H5I_BADID; - hid_t nmtype_id = H5I_BADID; - hid_t m_sid = H5I_BADID; - hid_t file_space_id = H5I_BADID; - hid_t preserve_id = H5I_BADID; + hid_t did = H5I_INVALID_HID; + hid_t tid = H5I_INVALID_HID; + hid_t write_type_id = H5I_INVALID_HID; + hid_t member_type_id = H5I_INVALID_HID; + hid_t nmtype_id = H5I_INVALID_HID; + hid_t m_sid = H5I_INVALID_HID; + hid_t file_space_id = H5I_INVALID_HID; + hid_t preserve_id = H5I_INVALID_HID; hsize_t count[1]; hsize_t offset[1]; hsize_t i; @@ -663,10 +663,10 @@ H5TBwrite_fields_index(hid_t loc_id, const char *dset_name, hsize_t nfields, con /* close */ if (H5Tclose(member_type_id) < 0) goto out; - member_type_id = H5I_BADID; + member_type_id = H5I_INVALID_HID; if (H5Tclose(nmtype_id) < 0) goto out; - nmtype_id = H5I_BADID; + nmtype_id = H5I_INVALID_HID; H5free_memory(member_name); member_name = NULL; @@ -747,10 +747,10 @@ herr_t H5TBread_table(hid_t loc_id, const char *dset_name, size_t type_size, const size_t *field_offset, const size_t *field_sizes, void *dst_buf) { - hid_t did = H5I_BADID; - hid_t ftype_id = H5I_BADID; - hid_t mem_type_id = H5I_BADID; - hid_t sid = H5I_BADID; + hid_t did = H5I_INVALID_HID; + hid_t ftype_id = H5I_INVALID_HID; + hid_t mem_type_id = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; hsize_t dims[1]; herr_t ret_val = -1; @@ -820,9 +820,9 @@ herr_t H5TBread_records(hid_t loc_id, const char *dset_name, hsize_t start, hsize_t nrecords, size_t type_size, const size_t *field_offset, const size_t *field_sizes, void *buf) { - hid_t did = H5I_BADID; - hid_t ftype_id = H5I_BADID; - hid_t mem_type_id = H5I_BADID; + hid_t did = H5I_INVALID_HID; + hid_t ftype_id = H5I_INVALID_HID; + hid_t mem_type_id = H5I_INVALID_HID; hsize_t nrecords_orig; hsize_t nfields; herr_t ret_val = -1; @@ -887,13 +887,13 @@ H5TBread_fields_name(hid_t loc_id, const char *dset_name, const char *field_name hsize_t nrecords, size_t type_size, const size_t *field_offset, const size_t *field_sizes, void *buf) { - hid_t did = H5I_BADID; - hid_t ftype_id = H5I_BADID; - hid_t mem_type_id = H5I_BADID; - hid_t mtype_id = H5I_BADID; - hid_t nmtype_id = H5I_BADID; - hid_t sid = H5I_BADID; - hid_t m_sid = H5I_BADID; + hid_t did = H5I_INVALID_HID; + hid_t ftype_id = H5I_INVALID_HID; + hid_t mem_type_id = H5I_INVALID_HID; + hid_t mtype_id = H5I_INVALID_HID; + hid_t nmtype_id = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; + hid_t m_sid = H5I_INVALID_HID; hssize_t nfields; hsize_t count[1]; hsize_t offset[1]; @@ -960,10 +960,10 @@ H5TBread_fields_name(hid_t loc_id, const char *dset_name, const char *field_name /* close */ if (H5Tclose(mtype_id) < 0) goto out; - mtype_id = H5I_BADID; + mtype_id = H5I_INVALID_HID; if (H5Tclose(nmtype_id) < 0) goto out; - nmtype_id = H5I_BADID; + nmtype_id = H5I_INVALID_HID; j++; } /* end if */ @@ -1044,13 +1044,13 @@ H5TBread_fields_index(hid_t loc_id, const char *dset_name, hsize_t nfields, cons hsize_t start, hsize_t nrecords, size_t type_size, const size_t *field_offset, const size_t *field_sizes, void *buf) { - hid_t did = H5I_BADID; - hid_t tid = H5I_BADID; - hid_t read_type_id = H5I_BADID; - hid_t member_type_id = H5I_BADID; - hid_t nmtype_id = H5I_BADID; - hid_t sid = H5I_BADID; - hid_t m_sid = H5I_BADID; + hid_t did = H5I_INVALID_HID; + hid_t tid = H5I_INVALID_HID; + hid_t read_type_id = H5I_INVALID_HID; + hid_t member_type_id = H5I_INVALID_HID; + hid_t nmtype_id = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; + hid_t m_sid = H5I_INVALID_HID; hsize_t count[1]; hsize_t offset[1]; hsize_t mem_size[1]; @@ -1117,10 +1117,10 @@ H5TBread_fields_index(hid_t loc_id, const char *dset_name, hsize_t nfields, cons /* close the member type */ if (H5Tclose(member_type_id) < 0) goto out; - member_type_id = H5I_BADID; + member_type_id = H5I_INVALID_HID; if (H5Tclose(nmtype_id) < 0) goto out; - nmtype_id = H5I_BADID; + nmtype_id = H5I_INVALID_HID; H5free_memory(member_name); member_name = NULL; @@ -1198,11 +1198,11 @@ out: herr_t H5TBdelete_record(hid_t loc_id, const char *dset_name, hsize_t start, hsize_t nrecords) { - hid_t did = H5I_BADID; - hid_t tid = H5I_BADID; - hid_t sid = H5I_BADID; - hid_t m_sid = H5I_BADID; - hid_t mem_type_id = H5I_BADID; + hid_t did = H5I_INVALID_HID; + hid_t tid = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; + hid_t m_sid = H5I_INVALID_HID; + hid_t mem_type_id = H5I_INVALID_HID; hsize_t nfields; hsize_t ntotal_records; hsize_t read_start; @@ -1294,16 +1294,16 @@ H5TBdelete_record(hid_t loc_id, const char *dset_name, hsize_t start, hsize_t nr /* close */ if (H5Sclose(m_sid) < 0) goto out; - m_sid = H5I_BADID; + m_sid = H5I_INVALID_HID; if (H5Tclose(mem_type_id) < 0) goto out; - mem_type_id = H5I_BADID; + mem_type_id = H5I_INVALID_HID; if (H5Sclose(sid) < 0) goto out; - sid = H5I_BADID; + sid = H5I_INVALID_HID; if (H5Tclose(tid) < 0) goto out; - tid = H5I_BADID; + tid = H5I_INVALID_HID; } /* read_nrecords */ /*------------------------------------------------------------------------- @@ -1361,11 +1361,11 @@ herr_t H5TBinsert_record(hid_t loc_id, const char *dset_name, hsize_t start, hsize_t nrecords, size_t type_size, const size_t *field_offset, const size_t *field_sizes, void *buf) { - hid_t did = H5I_BADID; - hid_t tid = H5I_BADID; - hid_t mem_type_id = H5I_BADID; - hid_t sid = H5I_BADID; - hid_t m_sid = H5I_BADID; + hid_t did = H5I_INVALID_HID; + hid_t tid = H5I_INVALID_HID; + hid_t mem_type_id = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; + hid_t m_sid = H5I_INVALID_HID; hsize_t nfields; hsize_t ntotal_records; hsize_t read_nrecords; @@ -1442,10 +1442,10 @@ H5TBinsert_record(hid_t loc_id, const char *dset_name, hsize_t start, hsize_t nr /* terminate access to the dataspace */ if (H5Sclose(m_sid) < 0) goto out; - m_sid = H5I_BADID; + m_sid = H5I_INVALID_HID; if (H5Sclose(sid) < 0) goto out; - sid = H5I_BADID; + sid = H5I_INVALID_HID; /*------------------------------------------------------------------------- * write the "pushed down" records @@ -1513,10 +1513,10 @@ herr_t H5TBadd_records_from(hid_t loc_id, const char *dset_name1, hsize_t start1, hsize_t nrecords, const char *dset_name2, hsize_t start2) { - hid_t did = H5I_BADID; - hid_t tid = H5I_BADID; - hid_t sid = H5I_BADID; - hid_t m_sid = H5I_BADID; + hid_t did = H5I_INVALID_HID; + hid_t tid = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; + hid_t m_sid = H5I_INVALID_HID; hsize_t count[1]; hsize_t offset[1]; hsize_t mem_size[1]; @@ -1643,24 +1643,24 @@ H5TBcombine_tables(hid_t loc_id1, const char *dset_name1, hid_t loc_id2, const c const char *dset_name3) { /* identifiers for the 1st dataset. */ - hid_t did_1 = H5I_BADID; - hid_t tid_1 = H5I_BADID; - hid_t sid_1 = H5I_BADID; - hid_t pid_1 = H5I_BADID; + hid_t did_1 = H5I_INVALID_HID; + hid_t tid_1 = H5I_INVALID_HID; + hid_t sid_1 = H5I_INVALID_HID; + hid_t pid_1 = H5I_INVALID_HID; /* identifiers for the 2nd dataset. */ - hid_t did_2 = H5I_BADID; - hid_t tid_2 = H5I_BADID; - hid_t sid_2 = H5I_BADID; - hid_t pid_2 = H5I_BADID; + hid_t did_2 = H5I_INVALID_HID; + hid_t tid_2 = H5I_INVALID_HID; + hid_t sid_2 = H5I_INVALID_HID; + hid_t pid_2 = H5I_INVALID_HID; /* identifiers for the 3rd dataset. */ - hid_t did_3 = H5I_BADID; - hid_t tid_3 = H5I_BADID; - hid_t sid_3 = H5I_BADID; - hid_t pid_3 = H5I_BADID; - hid_t sid = H5I_BADID; - hid_t m_sid = H5I_BADID; - hid_t member_type_id = H5I_BADID; - hid_t attr_id = H5I_BADID; + hid_t did_3 = H5I_INVALID_HID; + hid_t tid_3 = H5I_INVALID_HID; + hid_t sid_3 = H5I_INVALID_HID; + hid_t pid_3 = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; + hid_t m_sid = H5I_INVALID_HID; + hid_t member_type_id = H5I_INVALID_HID; + hid_t attr_id = H5I_INVALID_HID; hsize_t count[1]; hsize_t offset[1]; hsize_t mem_size[1]; @@ -1807,17 +1807,17 @@ H5TBcombine_tables(hid_t loc_id1, const char *dset_name1, hid_t loc_id2, const c if (H5Aclose(attr_id) < 0) goto out; - attr_id = H5I_BADID; + attr_id = H5I_INVALID_HID; if (H5Tclose(member_type_id) < 0) goto out; - member_type_id = H5I_BADID; + member_type_id = H5I_INVALID_HID; } /* end for */ /* close data space. */ if (H5Sclose(sid) < 0) goto out; - sid = H5I_BADID; + sid = H5I_INVALID_HID; } /* end if */ /*------------------------------------------------------------------------- @@ -1856,7 +1856,7 @@ H5TBcombine_tables(hid_t loc_id1, const char *dset_name1, hid_t loc_id2, const c */ if (H5Sclose(m_sid) < 0) goto out; - m_sid = H5I_BADID; + m_sid = H5I_INVALID_HID; HDfree(tmp_buf); tmp_buf = NULL; @@ -1999,25 +1999,25 @@ H5TBinsert_field(hid_t loc_id, const char *dset_name, const char *field_name, hi hsize_t position, const void *fill_data, const void *buf) { /* identifiers for the 1st, original dataset */ - hid_t did_1 = H5I_BADID; - hid_t tid_1 = H5I_BADID; - hid_t sid_1 = H5I_BADID; - hid_t pid_1 = H5I_BADID; - hid_t msid_1 = H5I_BADID; + hid_t did_1 = H5I_INVALID_HID; + hid_t tid_1 = H5I_INVALID_HID; + hid_t sid_1 = H5I_INVALID_HID; + hid_t pid_1 = H5I_INVALID_HID; + hid_t msid_1 = H5I_INVALID_HID; /* identifiers for the 2nd, new dataset */ - hid_t did_2 = H5I_BADID; - hid_t tid_2 = H5I_BADID; - hid_t sid_2 = H5I_BADID; - hid_t pid_2 = H5I_BADID; - hid_t msid_2 = H5I_BADID; + hid_t did_2 = H5I_INVALID_HID; + hid_t tid_2 = H5I_INVALID_HID; + hid_t sid_2 = H5I_INVALID_HID; + hid_t pid_2 = H5I_INVALID_HID; + hid_t msid_2 = H5I_INVALID_HID; /* identifiers for the 3rd, final dataset */ - hid_t did_3 = H5I_BADID; - hid_t tid_3 = H5I_BADID; - hid_t sid_3 = H5I_BADID; - hid_t member_type_id = H5I_BADID; - hid_t write_type_id = H5I_BADID; - hid_t preserve_id = H5I_BADID; - hid_t attr_id = H5I_BADID; + hid_t did_3 = H5I_INVALID_HID; + hid_t tid_3 = H5I_INVALID_HID; + hid_t sid_3 = H5I_INVALID_HID; + hid_t member_type_id = H5I_INVALID_HID; + hid_t write_type_id = H5I_INVALID_HID; + hid_t preserve_id = H5I_INVALID_HID; + hid_t attr_id = H5I_INVALID_HID; size_t member_size; size_t new_member_size = 0; size_t total_size; @@ -2157,7 +2157,7 @@ H5TBinsert_field(hid_t loc_id, const char *dset_name, const char *field_name, hi /* close the member type */ if (H5Tclose(member_type_id) < 0) goto out; - member_type_id = H5I_BADID; + member_type_id = H5I_INVALID_HID; } /* end else */ } /* end for */ @@ -2307,12 +2307,12 @@ H5TBinsert_field(hid_t loc_id, const char *dset_name, const char *field_name, hi if (H5Aclose(attr_id) < 0) goto out; - attr_id = H5I_BADID; + attr_id = H5I_INVALID_HID; /* close the member type */ if (H5Tclose(member_type_id) < 0) goto out; - member_type_id = H5I_BADID; + member_type_id = H5I_INVALID_HID; } /* end for */ /*------------------------------------------------------------------------- @@ -2334,11 +2334,11 @@ H5TBinsert_field(hid_t loc_id, const char *dset_name, const char *field_name, hi if (H5Aclose(attr_id) < 0) goto out; - attr_id = H5I_BADID; + attr_id = H5I_INVALID_HID; if (H5Tclose(member_type_id) < 0) goto out; - member_type_id = H5I_BADID; + member_type_id = H5I_INVALID_HID; } /* end fill_data */ ret_val = 0; @@ -2415,23 +2415,23 @@ herr_t H5TBdelete_field(hid_t loc_id, const char *dset_name, const char *field_name) { /* identifiers for the 1st original dataset */ - hid_t did_1 = H5I_BADID; - hid_t tid_1 = H5I_BADID; - hid_t sid_1 = H5I_BADID; - hid_t pid_1 = H5I_BADID; + hid_t did_1 = H5I_INVALID_HID; + hid_t tid_1 = H5I_INVALID_HID; + hid_t sid_1 = H5I_INVALID_HID; + hid_t pid_1 = H5I_INVALID_HID; /* identifiers for the 2nd new dataset */ - hid_t did_2 = H5I_BADID; - hid_t tid_2 = H5I_BADID; - hid_t sid_2 = H5I_BADID; - hid_t pid_2 = H5I_BADID; + hid_t did_2 = H5I_INVALID_HID; + hid_t tid_2 = H5I_INVALID_HID; + hid_t sid_2 = H5I_INVALID_HID; + hid_t pid_2 = H5I_INVALID_HID; /* identifiers for the 3rd final dataset */ - hid_t did_3 = H5I_BADID; - hid_t tid_3 = H5I_BADID; - hid_t member_type_id = H5I_BADID; - hid_t preserve_id = H5I_BADID; - hid_t read_type_id = H5I_BADID; - hid_t write_type_id = H5I_BADID; - hid_t attr_id = H5I_BADID; + hid_t did_3 = H5I_INVALID_HID; + hid_t tid_3 = H5I_INVALID_HID; + hid_t member_type_id = H5I_INVALID_HID; + hid_t preserve_id = H5I_INVALID_HID; + hid_t read_type_id = H5I_INVALID_HID; + hid_t write_type_id = H5I_INVALID_HID; + hid_t attr_id = H5I_INVALID_HID; size_t member_size; size_t type_size1; size_t type_size2; @@ -2515,7 +2515,7 @@ H5TBdelete_field(hid_t loc_id, const char *dset_name, const char *field_name) /* close the member type */ if (H5Tclose(member_type_id) < 0) goto out; - member_type_id = H5I_BADID; + member_type_id = H5I_INVALID_HID; H5free_memory(member_name); member_name = NULL; @@ -2598,7 +2598,7 @@ H5TBdelete_field(hid_t loc_id, const char *dset_name, const char *field_name) /* close the member type */ if (H5Tclose(member_type_id) < 0) goto out; - member_type_id = H5I_BADID; + member_type_id = H5I_INVALID_HID; } /* end if */ H5free_memory(member_name); @@ -2682,22 +2682,22 @@ H5TBdelete_field(hid_t loc_id, const char *dset_name, const char *field_name) /* end access to the property list */ if (H5Pclose(preserve_id) < 0) goto out; - preserve_id = H5I_BADID; + preserve_id = H5I_INVALID_HID; /* close the member type */ if (H5Tclose(member_type_id) < 0) goto out; - member_type_id = H5I_BADID; + member_type_id = H5I_INVALID_HID; /* close the read type */ if (H5Tclose(read_type_id) < 0) goto out; - read_type_id = H5I_BADID; + read_type_id = H5I_INVALID_HID; /* close the write type */ if (H5Tclose(write_type_id) < 0) goto out; - write_type_id = H5I_BADID; + write_type_id = H5I_INVALID_HID; HDfree(tmp_buf); tmp_buf = NULL; @@ -2769,18 +2769,18 @@ H5TBdelete_field(hid_t loc_id, const char *dset_name, const char *field_name) if (H5Aclose(attr_id) < 0) goto out; - attr_id = H5I_BADID; + attr_id = H5I_INVALID_HID; /* close the member type */ if (H5Tclose(member_type_id) < 0) goto out; - member_type_id = H5I_BADID; + member_type_id = H5I_INVALID_HID; } /* end for */ /* close data space. */ if (H5Sclose(sid_1) < 0) goto out; - sid_1 = H5I_BADID; + sid_1 = H5I_INVALID_HID; } /* end if */ ret_val = 0; @@ -2962,9 +2962,9 @@ out: herr_t H5TBget_table_info(hid_t loc_id, const char *dset_name, hsize_t *nfields, hsize_t *nrecords) { - hid_t tid = H5I_BADID; - hid_t sid = H5I_BADID; - hid_t did = H5I_BADID; + hid_t tid = H5I_INVALID_HID; + hid_t sid = H5I_INVALID_HID; + hid_t did = H5I_INVALID_HID; hsize_t dims[1]; int num_members; herr_t ret_val = -1; @@ -3008,7 +3008,7 @@ H5TBget_table_info(hid_t loc_id, const char *dset_name, hsize_t *nfields, hsize_ /* terminate access to the dataspace */ if (H5Sclose(sid) < 0) goto out; - sid = H5I_BADID; + sid = H5I_INVALID_HID; *nrecords = dims[0]; } /* end if */ @@ -3048,11 +3048,11 @@ herr_t H5TBget_field_info(hid_t loc_id, const char *dset_name, char *field_names[], size_t *field_sizes, size_t *field_offsets, size_t *type_size) { - hid_t did = H5I_BADID; /* dataset ID */ - hid_t tid = H5I_BADID; /* file type ID */ - hid_t n_tid = H5I_BADID; /* native type ID */ - hid_t m_tid = H5I_BADID; /* member type ID */ - hid_t nm_tid = H5I_BADID; /* native member ID */ + hid_t did = H5I_INVALID_HID; /* dataset ID */ + hid_t tid = H5I_INVALID_HID; /* file type ID */ + hid_t n_tid = H5I_INVALID_HID; /* native type ID */ + hid_t m_tid = H5I_INVALID_HID; /* member type ID */ + hid_t nm_tid = H5I_INVALID_HID; /* native member ID */ hssize_t nfields; hssize_t i; herr_t ret_val = -1; @@ -3111,10 +3111,10 @@ H5TBget_field_info(hid_t loc_id, const char *dset_name, char *field_names[], siz /* close the member types */ if (H5Tclose(m_tid) < 0) goto out; - m_tid = H5I_BADID; + m_tid = H5I_INVALID_HID; if (H5Tclose(nm_tid) < 0) goto out; - nm_tid = H5I_BADID; + nm_tid = H5I_INVALID_HID; } /* end for */ ret_val = 0; @@ -3267,9 +3267,9 @@ static hid_t H5TB_create_type(hid_t loc_id, const char *dset_name, size_t type_size, const size_t *field_offset, const size_t *field_sizes, hid_t ftype_id) { - hid_t mem_type_id = H5I_BADID; - hid_t mtype_id = H5I_BADID; - hid_t nmtype_id = H5I_BADID; + hid_t mem_type_id = H5I_INVALID_HID; + hid_t mtype_id = H5I_INVALID_HID; + hid_t nmtype_id = H5I_INVALID_HID; size_t size_native; hsize_t nfields = 0; char ** fnames = NULL; @@ -3310,10 +3310,10 @@ H5TB_create_type(hid_t loc_id, const char *dset_name, size_t type_size, const si goto out; if (H5Tclose(mtype_id) < 0) goto out; - mtype_id = H5I_BADID; + mtype_id = H5I_INVALID_HID; if (H5Tclose(nmtype_id) < 0) goto out; - nmtype_id = H5I_BADID; + nmtype_id = H5I_INVALID_HID; } /* end for */ ret_val = mem_type_id; @@ -3364,8 +3364,8 @@ herr_t H5TB_common_append_records(hid_t dataset_id, hid_t mem_type_id, size_t nrecords, hsize_t orig_table_size, const void *buf) { - hid_t sid = H5I_BADID; - hid_t m_sid = H5I_BADID; + hid_t sid = H5I_INVALID_HID; + hid_t m_sid = H5I_INVALID_HID; hsize_t count[1]; hsize_t offset[1]; hsize_t dims[1]; @@ -3429,8 +3429,8 @@ herr_t H5TB_common_read_records(hid_t dataset_id, hid_t mem_type_id, hsize_t start, size_t nrecords, hsize_t table_size, void *buf) { - hid_t sid = H5I_BADID; - hid_t m_sid = H5I_BADID; + hid_t sid = H5I_INVALID_HID; + hid_t m_sid = H5I_INVALID_HID; hsize_t count[1]; hsize_t offset[1]; hsize_t mem_size[1]; diff --git a/hl/test/test_image.c b/hl/test/test_image.c index 0c7d511..dc1be96 100644 --- a/hl/test/test_image.c +++ b/hl/test/test_image.c @@ -650,10 +650,10 @@ test_generate(void) HL_TESTING2("make indexed image from land data"); for (i = 0; i < n_elements; i++) { - if (data[i] < 0) + if (data[i] < 0.0f) image_data[i] = 0; else - image_data[i] = (unsigned char)((255 * (data[i])) / xmax); + image_data[i] = (unsigned char)((255 * data[i]) / xmax); } /* make the image */ @@ -671,10 +671,11 @@ test_generate(void) HL_TESTING2("make indexed image from sea data"); for (i = 0; i < n_elements; i++) { - if (data[i] > 0) + if (data[i] > 0.0f) image_data[i] = 0; - else - image_data[i] = (unsigned char)((255 * (data[i] - xmin)) / xmin); + else { + image_data[i] = (unsigned char)((255.0f * (data[i] - xmin)) / (xmax - xmin)); + } } /* make the image */ diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt index c1e15bc..ea346b0 100644 --- a/src/CMakeLists.txt +++ b/src/CMakeLists.txt @@ -1009,8 +1009,7 @@ set (H5_PUBLIC_GENERATED_HEADERS option (HDF5_GENERATE_HEADERS "Rebuild Generated Files" ON) if (HDF5_GENERATE_HEADERS) set_source_files_properties(${H5_GENERATED_HEADERS} PROPERTIES GENERATED TRUE) - find_package (Perl) - if (PERL_FOUND) + if (H5_PERL_FOUND) execute_process ( COMMAND ${PERL_EXECUTABLE} ${HDF5_SOURCE_DIR}/bin/make_err ${HDF5_SRC_DIR}/H5err.txt OUTPUT_VARIABLE SCRIPT_OUTPUT ) @@ -1063,6 +1062,7 @@ if (LOCAL_BATCH_TEST) endif () endif () +set (lib_prog_deps) if (NOT EXISTS "${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c") add_executable (H5detect ${HDF5_SRC_DIR}/H5detect.c) target_include_directories (H5detect PRIVATE "${HDF5_SRC_DIR};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") @@ -1070,8 +1070,11 @@ if (NOT EXISTS "${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c") TARGET_C_PROPERTIES (H5detect STATIC) target_link_libraries (H5detect PRIVATE "$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_LIBRARIES}>" $<$<OR:$<PLATFORM_ID:Windows>,$<PLATFORM_ID:MinGW>>:ws2_32.lib> - PRIVATE $<$<PLATFORM_ID:Emscripten>:"-O0"> ) + target_compile_options(H5detect + PRIVATE "$<$<PLATFORM_ID:Emscripten>:-O0>" + ) + set (lib_prog_deps ${lib_prog_deps} H5detect) if (HDF5_BATCH_H5DETECT) configure_file ( @@ -1079,77 +1082,68 @@ if (NOT EXISTS "${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c") ${HDF5_BINARY_DIR}/${HDF5_BATCH_H5DETECT_SCRIPT} ESCAPE_QUOTES @ONLY ) add_custom_command ( - OUTPUT ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c - ${HDF5_GENERATED_SOURCE_DIR}/gen_SRCS.stamp1 - COMMAND ${HDF5_BATCH_CMD} - ARGS ${HDF5_BINARY_DIR}/${HDF5_BATCH_H5DETECT_SCRIPT} - COMMAND ${CMAKE_COMMAND} - ARGS -E echo "Executed batch command to create H5Tinit.c" + OUTPUT gen_SRCS.stamp1 + COMMAND ${HDF5_BATCH_CMD} + ARGS ${HDF5_BINARY_DIR}/${HDF5_BATCH_H5DETECT_SCRIPT} + BYPRODUCTS H5Tinit.c gen_SRCS.stamp1 + COMMAND ${CMAKE_COMMAND} + ARGS -E echo "Executed batch command to create H5Tinit.c" COMMAND ${CMAKE_COMMAND} - ARGS -E touch ${HDF5_GENERATED_SOURCE_DIR}/gen_SRCS.stamp1 + ARGS -E touch gen_SRCS.stamp1 DEPENDS H5detect WORKING_DIRECTORY ${HDF5_GENERATED_SOURCE_DIR} ) add_custom_target (gen_H5Tinit COMMAND ${CMAKE_COMMAND} -P ${HDF5_SOURCE_DIR}/config/cmake/wait_H5Tinit.cmake ) - if (BUILD_SHARED_LIBS) - add_custom_command ( - OUTPUT ${HDF5_GENERATED_SOURCE_DIR}/shared/H5Tinit.c - ${HDF5_GENERATED_SOURCE_DIR}/shared/shared_gen_SRCS.stamp1 - COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different "${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c" "${HDF5_GENERATED_SOURCE_DIR}/shared/H5Tinit.c" - COMMAND ${CMAKE_COMMAND} - ARGS -E touch ${HDF5_GENERATED_SOURCE_DIR}/shared/shared_gen_SRCS.stamp1 - DEPENDS gen_H5Tinit ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit_created - WORKING_DIRECTORY ${HDF5_GENERATED_SOURCE_DIR} - ) - set_source_files_properties (${HDF5_GENERATED_SOURCE_DIR}/shared/H5Tinit.c PROPERTIES GENERATED TRUE) - endif () + set_source_files_properties (${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c PROPERTIES GENERATED TRUE) else () - add_custom_command ( - OUTPUT ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c - ${HDF5_GENERATED_SOURCE_DIR}/gen_SRCS.stamp1 - COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:H5detect> - ARGS ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c + add_custom_command (TARGET H5detect POST_BUILD + COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:H5detect> + ARGS H5Tinit.c + BYPRODUCTS H5Tinit.c gen_SRCS.stamp1 COMMAND ${CMAKE_COMMAND} - ARGS -E touch ${HDF5_GENERATED_SOURCE_DIR}/gen_SRCS.stamp1 + ARGS -E touch gen_SRCS.stamp1 DEPENDS H5detect WORKING_DIRECTORY ${HDF5_GENERATED_SOURCE_DIR} + COMMENT "Create H5Tinit.c" ) + set_source_files_properties (${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c PROPERTIES GENERATED TRUE) if (BUILD_SHARED_LIBS) - add_custom_command ( - OUTPUT ${HDF5_GENERATED_SOURCE_DIR}/shared/H5Tinit.c - ${HDF5_GENERATED_SOURCE_DIR}/shared/shared_gen_SRCS.stamp1 + add_custom_command (TARGET H5detect POST_BUILD COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different "${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c" "${HDF5_GENERATED_SOURCE_DIR}/shared/H5Tinit.c" + ARGS -E copy_if_different H5Tinit.c shared/H5Tinit.c + BYPRODUCTS shared/H5Tinit.c shared/shared_gen_SRCS.stamp1 COMMAND ${CMAKE_COMMAND} - ARGS -E touch ${HDF5_GENERATED_SOURCE_DIR}/shared/shared_gen_SRCS.stamp1 - DEPENDS ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c + ARGS -E touch shared/shared_gen_SRCS.stamp1 + DEPENDS H5detect H5Tinit.c WORKING_DIRECTORY ${HDF5_GENERATED_SOURCE_DIR} + COMMENT "Copy H5Tinit.c to shared folder" ) set_source_files_properties (${HDF5_GENERATED_SOURCE_DIR}/shared/H5Tinit.c PROPERTIES GENERATED TRUE) endif () endif () - set_source_files_properties (${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c PROPERTIES GENERATED TRUE) else () add_custom_command ( - OUTPUT ${HDF5_GENERATED_SOURCE_DIR}/gen_SRCS.stamp1 + OUTPUT gen_SRCS.stamp1 COMMAND ${CMAKE_COMMAND} - ARGS -E touch ${HDF5_GENERATED_SOURCE_DIR}/gen_SRCS.stamp1 - DEPENDS ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c + ARGS -E touch gen_SRCS.stamp1 + DEPENDS H5Tinit.c WORKING_DIRECTORY ${HDF5_GENERATED_SOURCE_DIR} + COMMENT "Touch existing H5Tinit.c" ) + set_source_files_properties (${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c PROPERTIES GENERATED TRUE) if (BUILD_SHARED_LIBS) add_custom_command ( - OUTPUT ${HDF5_GENERATED_SOURCE_DIR}/shared/H5Tinit.c - ${HDF5_GENERATED_SOURCE_DIR}/shared/shared_gen_SRCS.stamp1 + OUTPUT shared/shared_gen_SRCS.stamp1 COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different "${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c" "${HDF5_GENERATED_SOURCE_DIR}/shared/H5Tinit.c" + ARGS -E copy_if_different H5Tinit.c shared/H5Tinit.c + BYPRODUCTS shared/H5Tinit.c shared/shared_gen_SRCS.stamp1 COMMAND ${CMAKE_COMMAND} - ARGS -E touch ${HDF5_GENERATED_SOURCE_DIR}/shared/shared_gen_SRCS.stamp1 - DEPENDS ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c + ARGS -E touch shared/shared_gen_SRCS.stamp1 + DEPENDS H5Tinit.c WORKING_DIRECTORY ${HDF5_GENERATED_SOURCE_DIR} + COMMENT "Copy existing H5Tinit.c to shared folder" ) set_source_files_properties (${HDF5_GENERATED_SOURCE_DIR}/shared/H5Tinit.c PROPERTIES GENERATED TRUE) endif () @@ -1168,8 +1162,11 @@ target_compile_definitions(H5make_libsettings PUBLIC ${HDF_EXTRA_C_FLAGS} ${HDF_ TARGET_C_PROPERTIES (H5make_libsettings STATIC) target_link_libraries (H5make_libsettings PRIVATE "$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_LIBRARIES}>" $<$<OR:$<PLATFORM_ID:Windows>,$<PLATFORM_ID:MinGW>>:ws2_32.lib> - PRIVATE $<$<PLATFORM_ID:Emscripten>:"-O0"> ) +target_compile_options(H5make_libsettings + PRIVATE "$<$<PLATFORM_ID:Emscripten>:-O0>" +) +set (lib_prog_deps ${lib_prog_deps} H5make_libsettings) #----------------------------------------------------------------------------- # Add Target to clang-format @@ -1178,27 +1175,27 @@ if (HDF5_ENABLE_FORMATTERS) clang_format (HDF5_SRC_LIBSETTINGS_FORMAT H5make_libsettings) endif () -add_custom_command ( - OUTPUT ${HDF5_SRC_BINARY_DIR}/H5lib_settings.c - ${HDF5_SRC_BINARY_DIR}/gen_SRCS.stamp2 - COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:H5make_libsettings> - ARGS ${HDF5_SRC_BINARY_DIR}/H5lib_settings.c +add_custom_command (TARGET H5make_libsettings POST_BUILD + COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:H5make_libsettings> + ARGS H5lib_settings.c + BYPRODUCTS H5lib_settings.c gen_SRCS.stamp2 COMMAND ${CMAKE_COMMAND} - ARGS -E touch ${HDF5_GENERATED_SOURCE_DIR}/gen_SRCS.stamp2 + ARGS -E touch gen_SRCS.stamp2 DEPENDS H5make_libsettings WORKING_DIRECTORY ${HDF5_SRC_BINARY_DIR} + COMMENT "Create H5lib_settings.c" ) set_source_files_properties (${HDF5_SRC_BINARY_DIR}/H5lib_settings.c PROPERTIES GENERATED TRUE) if (BUILD_SHARED_LIBS) - add_custom_command ( - OUTPUT ${HDF5_SRC_BINARY_DIR}/shared/H5lib_settings.c - ${HDF5_SRC_BINARY_DIR}/shared/shared_gen_SRCS.stamp2 + add_custom_command (TARGET H5make_libsettings POST_BUILD COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different "${HDF5_SRC_BINARY_DIR}/H5lib_settings.c" "${HDF5_SRC_BINARY_DIR}/shared/H5lib_settings.c" + ARGS -E copy_if_different H5lib_settings.c shared/H5lib_settings.c + BYPRODUCTS shared/H5lib_settings.c shared/shared_gen_SRCS.stamp2 COMMAND ${CMAKE_COMMAND} - ARGS -E touch ${HDF5_GENERATED_SOURCE_DIR}/shared/shared_gen_SRCS.stamp2 - DEPENDS ${HDF5_SRC_BINARY_DIR}/H5lib_settings.c + ARGS -E touch shared/shared_gen_SRCS.stamp2 + DEPENDS H5make_libsettings H5lib_settings.c WORKING_DIRECTORY ${HDF5_SRC_BINARY_DIR} + COMMENT "Copy H5lib_settings.c to shared folder" ) set_source_files_properties (${HDF5_SRC_BINARY_DIR}/shared/H5lib_settings.c PROPERTIES GENERATED TRUE) endif () @@ -1212,7 +1209,10 @@ option (HDF5_ENABLE_DEBUG_APIS "Turn on extra debug output in all packages" OFF) #----------------------------------------------------------------------------- if (NOT ONLY_SHARED_LIBS) set (gen_SRCS ${HDF5_GENERATED_SOURCE_DIR}/H5Tinit.c ${HDF5_SRC_BINARY_DIR}/H5lib_settings.c) - add_custom_target (gen_${HDF5_LIB_TARGET} ALL DEPENDS ${HDF5_GENERATED_SOURCE_DIR}/gen_SRCS.stamp1 ${HDF5_GENERATED_SOURCE_DIR}/gen_SRCS.stamp2) + add_custom_target (gen_${HDF5_LIB_TARGET} ALL + DEPENDS ${lib_prog_deps} ${gen_SRCS} ${HDF5_GENERATED_SOURCE_DIR}/gen_SRCS.stamp1 ${HDF5_SRC_BINARY_DIR}/gen_SRCS.stamp2 + COMMENT "Generation target files" + ) add_library (${HDF5_LIB_TARGET} STATIC ${common_SRCS} ${gen_SRCS} ${H5_PUBLIC_HEADERS} ${H5_PRIVATE_HEADERS} ${H5_GENERATED_HEADERS} ${H5_MODULE_HEADERS}) target_include_directories (${HDF5_LIB_TARGET} @@ -1248,7 +1248,10 @@ endif () if (BUILD_SHARED_LIBS) set (shared_gen_SRCS ${HDF5_GENERATED_SOURCE_DIR}/shared/H5Tinit.c ${HDF5_SRC_BINARY_DIR}/shared/H5lib_settings.c) - add_custom_target (gen_${HDF5_LIBSH_TARGET} ALL DEPENDS ${HDF5_GENERATED_SOURCE_DIR}/shared/shared_gen_SRCS.stamp1 ${HDF5_GENERATED_SOURCE_DIR}/shared/shared_gen_SRCS.stamp2) + add_custom_target (gen_${HDF5_LIBSH_TARGET} ALL + DEPENDS ${lib_prog_deps} ${shared_gen_SRCS} ${HDF5_GENERATED_SOURCE_DIR}/shared/shared_gen_SRCS.stamp1 ${HDF5_SRC_BINARY_DIR}/shared/shared_gen_SRCS.stamp2 + COMMENT "Shared generation target files" + ) add_library (${HDF5_LIBSH_TARGET} SHARED ${common_SRCS} ${shared_gen_SRCS} ${H5_PUBLIC_HEADERS} ${H5_PRIVATE_HEADERS} ${H5_GENERATED_HEADERS} ${H5_MODULE_HEADERS}) target_include_directories (${HDF5_LIBSH_TARGET} @@ -1367,7 +1370,11 @@ install ( ) if (NOT WIN32) - set (_PKG_CONFIG_COMPILER ${CMAKE_C_COMPILER}) + if (HDF5_ENABLE_PARALLEL AND MPI_C_FOUND) + set (_PKG_CONFIG_COMPILER ${MPI_C_COMPILER}) + else () + set (_PKG_CONFIG_COMPILER ${CMAKE_C_COMPILER}) + endif () configure_file ( ${HDF_RESOURCES_DIR}/libh5cc.in ${HDF5_BINARY_DIR}/CMakeFiles/h5cc @@ -1379,4 +1386,18 @@ if (NOT WIN32) PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE COMPONENT libraries ) + if (HDF5_ENABLE_PARALLEL AND MPI_C_FOUND) + #legacy requires a different name + configure_file ( + ${HDF_RESOURCES_DIR}/libh5cc.in + ${HDF5_BINARY_DIR}/CMakeFiles/h5pcc + @ONLY + ) + install ( + FILES ${HDF5_BINARY_DIR}/CMakeFiles/h5pcc + DESTINATION ${HDF5_INSTALL_BIN_DIR} + PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE + COMPONENT libraries + ) + endif () endif () @@ -411,6 +411,7 @@ H5_term_library(void) */ if (pending == 0) { pending += DOWN(AC); + /* Shut down the "pluggable" interfaces, before the plugin framework */ pending += DOWN(Z); pending += DOWN(FD); pending += DOWN(VL); diff --git a/test/CMakeLists.txt b/test/CMakeLists.txt index def070f..5b4302e 100644 --- a/test/CMakeLists.txt +++ b/test/CMakeLists.txt @@ -547,6 +547,7 @@ if (HDF5_ENABLE_FORMATTERS) clang_format (HDF5_TEST_mirror_vfd_FORMAT mirror_vfd) endif () + ############################################################################## ### A D D I T I O N A L T E S T S ### ############################################################################## diff --git a/test/CMakeTests.cmake b/test/CMakeTests.cmake index dfab713..e5ad962 100644 --- a/test/CMakeTests.cmake +++ b/test/CMakeTests.cmake @@ -888,8 +888,7 @@ if (ENABLE_EXTENDED_TESTS) #-- Adding test for flushrefresh file (MAKE_DIRECTORY "${PROJECT_BINARY_DIR}/H5TEST/flushrefresh_test") - find_package (Perl) - if (PERL_FOUND) + if (H5_PERL_FOUND) add_test ( NAME H5TEST-testflushrefresh-clear-objects COMMAND ${CMAKE_COMMAND} -E remove flushrefresh.h5 diff --git a/test/ShellTests.cmake b/test/ShellTests.cmake index 4676184..b28bbd6 100644 --- a/test/ShellTests.cmake +++ b/test/ShellTests.cmake @@ -23,8 +23,7 @@ if (UNIX) ############################################################################## # configure scripts to test dir ############################################################################## - find_package (Perl) - if (PERL_FOUND) + if (H5_PERL_FOUND) configure_file(${HDF5_TEST_SOURCE_DIR}/testflushrefresh.sh.in ${HDF5_TEST_BINARY_DIR}/H5TEST/testflushrefresh.sh @ONLY) endif () configure_file(${HDF5_TEST_SOURCE_DIR}/test_usecases.sh.in ${HDF5_TEST_BINARY_DIR}/H5TEST/test_usecases.sh @ONLY) @@ -198,18 +197,22 @@ if (UNIX) # testvdsswmr.sh: vds_swmr* add_test (H5SHELL-testflushrefresh ${SH_PROGRAM} ${HDF5_TEST_BINARY_DIR}/H5TEST/testflushrefresh.sh) set_tests_properties (H5SHELL-testflushrefresh PROPERTIES + ENVIRONMENT "LD_LIBRARY_PATH=$ENV{LD_LIBRARY_PATH}:${CMAKE_RUNTIME_OUTPUT_DIRECTORY}" WORKING_DIRECTORY ${HDF5_TEST_BINARY_DIR}/H5TEST ) add_test (H5SHELL-test_usecases ${SH_PROGRAM} ${HDF5_TEST_BINARY_DIR}/H5TEST/test_usecases.sh) set_tests_properties (H5SHELL-test_usecases PROPERTIES + ENVIRONMENT "LD_LIBRARY_PATH=$ENV{LD_LIBRARY_PATH}:${CMAKE_RUNTIME_OUTPUT_DIRECTORY}" WORKING_DIRECTORY ${HDF5_TEST_BINARY_DIR}/H5TEST ) add_test (H5SHELL-testswmr ${SH_PROGRAM} ${HDF5_TEST_BINARY_DIR}/H5TEST/testswmr.sh) set_tests_properties (H5SHELL-testswmr PROPERTIES + ENVIRONMENT "LD_LIBRARY_PATH=$ENV{LD_LIBRARY_PATH}:${CMAKE_RUNTIME_OUTPUT_DIRECTORY}" WORKING_DIRECTORY ${HDF5_TEST_BINARY_DIR}/H5TEST ) add_test (H5SHELL-testvdsswmr ${SH_PROGRAM} ${HDF5_TEST_BINARY_DIR}/H5TEST/testvdsswmr.sh) set_tests_properties (H5SHELL-testvdsswmr PROPERTIES + ENVIRONMENT "LD_LIBRARY_PATH=$ENV{LD_LIBRARY_PATH}:${CMAKE_RUNTIME_OUTPUT_DIRECTORY}" WORKING_DIRECTORY ${HDF5_TEST_BINARY_DIR}/H5TEST ) diff --git a/testpar/CMakeVFDTests.cmake b/testpar/CMakeVFDTests.cmake index 32f9337..5fac4ea 100644 --- a/testpar/CMakeVFDTests.cmake +++ b/testpar/CMakeVFDTests.cmake @@ -58,9 +58,9 @@ macro (ADD_VFD_TEST vfdname resultcode) WORKING_DIRECTORY ${HDF5_TEST_PAR_BINARY_DIR}/${vfdname} ) endforeach () - set_tests_properties (MPI_TEST_VFD-${vfdname}-pflush1 PROPERTIES WILL_FAIL "true") + set_tests_properties (MPI_TEST_VFD-${vfdname}-t_pflush1 PROPERTIES WILL_FAIL "true") #set_property (TEST MPI_TEST_t_pflush1 PROPERTY PASS_REGULAR_EXPRESSION "PASSED") - set_tests_properties (MPI_TEST_VFD-${vfdname}-pflush2 PROPERTIES DEPENDS MPI_TEST_VFD-${vfdname}-pflush1) + set_tests_properties (MPI_TEST_VFD-${vfdname}-t_pflush2 PROPERTIES DEPENDS MPI_TEST_VFD-${vfdname}-t_pflush1) endif () endmacro () diff --git a/tools/test/h5copy/testh5copy.sh.in b/tools/test/h5copy/testh5copy.sh.in index 374e397..79b6fd5 100644 --- a/tools/test/h5copy/testh5copy.sh.in +++ b/tools/test/h5copy/testh5copy.sh.in @@ -13,7 +13,7 @@ # # Tests for the h5copy tool # -# Pedro Vicente Nunes (pvn@hdfgroup.org), Albert Cheng (acheng@hdfgroup.org) +# Pedro Vicente Nunes, Albert Cheng # Thursday, July 20, 2006 # @@ -200,6 +200,7 @@ TOOLTEST() fi runh5diff=no fi + if [ "$3" = -o ]; then outputfile=$4 else @@ -219,6 +220,7 @@ TOOLTEST() $RUNSERIAL $H5COPY_BIN $@ ) > $actualout 2> $actualerr RET=$? + if [ $RET != 0 ]; then echo "*FAILED*" echo "failed result is:" @@ -268,6 +270,7 @@ TOOLTEST_PREFILL() $RUNSERIAL $H5COPY_BIN -i $inputfile -o $outputfile -v -s $grp_name -d $grp_name2 ) > $actualout 2> $actualerr RET=$? + if [ $RET != 0 ]; then echo "*FAILED*" echo "failed result is:" @@ -282,6 +285,7 @@ TOOLTEST_PREFILL() $RUNSERIAL $H5COPY_BIN -i $inputfile -o $outputfile -v -s $obj_name -d $obj_name2 ) > $actualout 2> $actualerr RET=$? + if [ $RET != 0 ]; then echo "*FAILED*" echo "failed result is:" @@ -313,6 +317,7 @@ TOOLTEST_SAME() else runh5diff=no fi + if [ "$3" = -o ]; then outputfile=$4 else @@ -330,6 +335,7 @@ TOOLTEST_SAME() $RUNSERIAL $H5COPY_BIN -i $inputfile -o $outputfile -v -s $grp_name -d $grp_name ) > $actualout 2> $actualerr RET=$? + if [ $RET != 0 ]; then echo "*FAILED*" echo "failed result is:" @@ -344,6 +350,7 @@ TOOLTEST_SAME() $RUNSERIAL $H5COPY_BIN -i $outputfile -o $outputfile -v -s $grp_name -d $grp_name2 ) > $actualout 2> $actualerr RET=$? + if [ $RET != 0 ]; then echo "*FAILED*" echo "failed result is:" @@ -406,6 +413,7 @@ TOOLTEST_FAIL() if [ "$1" = -i ]; then inputfile=$2 fi + if [ "$3" = -o ]; then outputfile=$4 fi @@ -417,8 +425,8 @@ TOOLTEST_FAIL() #echo "#############################" $RUNSERIAL $H5COPY_BIN $@ ) > $actualout 2> $actualerr - RET=$? + # save actualout and actualerr in case they are needed later. cp $actualout $actualout_sav STDOUT_FILTER $actualout diff --git a/tools/test/h5diff/h5diff_plugin.sh.in b/tools/test/h5diff/h5diff_plugin.sh.in index ff3d289..0ab169a 100644 --- a/tools/test/h5diff/h5diff_plugin.sh.in +++ b/tools/test/h5diff/h5diff_plugin.sh.in @@ -135,24 +135,24 @@ CLEAN_TESTFILES_AND_TESTDIR() # -h print help page while [ $# -gt 0 ]; do case "$1" in - -p) # reset the tool name and bin to run ph5diff tests - TESTNAME=ph5diff - H5DIFF=../../src/h5diff/ph5diff # The tool name - H5DIFF_BIN=`pwd`/$H5DIFF # The path of the tool binary - pmode=yes - shift - ;; + -p) # reset the tool name and bin to run ph5diff tests + TESTNAME=ph5diff + H5DIFF=../../src/h5diff/ph5diff # The tool name + H5DIFF_BIN=`pwd`/$H5DIFF # The path of the tool binary + pmode=yes + shift + ;; -h) # print help page - echo "$0 [-p] [-h]" - echo " -p run ph5diff tests" - echo " -h print help page" - shift - exit 0 - ;; + echo "$0 [-p] [-h]" + echo " -p run ph5diff tests" + echo " -h print help page" + shift + exit 0 + ;; *) # unknown option echo "$0: Unknown option ($1)" - exit 1 - ;; + exit 1 + ;; esac done @@ -218,19 +218,21 @@ TOOLTEST() { # Run test. TESTING $H5DIFF $@ ( - #echo "#############################" - #echo "Expected output for '$H5DIFF $@'" - #echo "#############################" - cd $TESTDIR - eval $ENVCMD $RUNCMD $H5DIFF_BIN "$@" + #echo "#############################" + #echo "Expected output for '$H5DIFF $@'" + #echo "#############################" + cd $TESTDIR + eval $ENVCMD $RUNCMD $H5DIFF_BIN "$@" ) >$actual 2>$actual_err EXIT_CODE=$? + # save actual and actual_err in case they are needed later. cp $actual $actual_sav STDOUT_FILTER $actual cp $actual_err $actual_err_sav STDERR_FILTER $actual_err cat $actual_err >> $actual + # don't add exit code check in pmode, as it causes failure. (exit code # is from mpirun not tool) # if any problem occurs relate to an exit code, it will be caught in @@ -260,27 +262,29 @@ TOOLTEST() { actual_sorted=actual_sorted sort $expect -o $expect_sorted sort $actual -o $actual_sorted + # remove "EXIT CODE:" line from expect file. test for exit code # is done by serial mode. grep -v "EXIT CODE:" $expect_sorted > $expect_sorted.noexit mv $expect_sorted.noexit $expect_sorted - if $CMP $expect_sorted $actual_sorted; then - echo " PASSED" - else - echo "*FAILED*" - nerrors="`expr $nerrors + 1`" - if test yes = "$verbose"; then - echo "====Expected result ($expect_sorted) differs from actual result ($actual_sorted)" - $DIFF $expect_sorted $actual_sorted |sed 's/^/ /' - echo "====The actual output ($actual_sav)" - sed 's/^/ /' < $actual_sav - echo "====The actual stderr ($actual_err_sav)" - sed 's/^/ /' < $actual_err_sav - echo "====End of actual stderr ($actual_err_sav)" - echo "" + + if $CMP $expect_sorted $actual_sorted; then + echo " PASSED" + else + echo "*FAILED*" + nerrors="`expr $nerrors + 1`" + if test yes = "$verbose"; then + echo "====Expected result ($expect_sorted) differs from actual result ($actual_sorted)" + $DIFF $expect_sorted $actual_sorted |sed 's/^/ /' + echo "====The actual output ($actual_sav)" + sed 's/^/ /' < $actual_sav + echo "====The actual stderr ($actual_err_sav)" + sed 's/^/ /' < $actual_err_sav + echo "====End of actual stderr ($actual_err_sav)" + echo "" + fi fi fi - fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then @@ -306,18 +310,20 @@ TOOLTEST_ERR() { # Run test. TESTING $H5DIFF $@ ( - #echo "#############################" - #echo "Expected output for '$H5DIFF $@'" - #echo "#############################" - cd $TESTDIR - eval $ENVCMD $RUNCMD $H5DIFF_BIN "$@" + #echo "#############################" + #echo "Expected output for '$H5DIFF $@'" + #echo "#############################" + cd $TESTDIR + eval $ENVCMD $RUNCMD $H5DIFF_BIN "$@" ) >$actual 2>$actual_err EXIT_CODE=$? + # save actual and actual_err in case they are needed later. cp $actual $actual_sav STDOUT_FILTER $actual cp $actual_err $actual_err_sav STDERR_FILTER $actual_err + # don't add exit code check in pmode, as it causes failure. (exit code # is from mpirun not tool) # if any problem occurs relate to an exit code, it will be caught in @@ -348,23 +354,24 @@ TOOLTEST_ERR() { sort $expect_err -o $expect_sorted sort $actual_err -o $actual_sorted mv $expect_sorted.noexit $expect_sorted - if $CMP $expect_sorted $actual_sorted; then - echo " PASSED" - else - echo "*FAILED*" - nerrors="`expr $nerrors + 1`" - if test yes = "$verbose"; then - echo "====Expected result ($expect_sorted) differs from actual result ($actual_sorted)" - $DIFF $expect_sorted $actual_sorted |sed 's/^/ /' - echo "====The actual output ($actual_sav)" - sed 's/^/ /' < $actual_sav - echo "====The actual stderr ($actual_err_sav)" - sed 's/^/ /' < $actual_err_sav - echo "====End of actual stderr ($actual_err_sav)" - echo "" + + if $CMP $expect_sorted $actual_sorted; then + echo " PASSED" + else + echo "*FAILED*" + nerrors="`expr $nerrors + 1`" + if test yes = "$verbose"; then + echo "====Expected result ($expect_sorted) differs from actual result ($actual_sorted)" + $DIFF $expect_sorted $actual_sorted |sed 's/^/ /' + echo "====The actual output ($actual_sav)" + sed 's/^/ /' < $actual_sav + echo "====The actual stderr ($actual_err_sav)" + sed 's/^/ /' < $actual_err_sav + echo "====End of actual stderr ($actual_err_sav)" + echo "" + fi fi fi - fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then diff --git a/tools/test/h5diff/testh5diff.sh.in b/tools/test/h5diff/testh5diff.sh.in index ac02da2..c8f8ed2 100644 --- a/tools/test/h5diff/testh5diff.sh.in +++ b/tools/test/h5diff/testh5diff.sh.in @@ -500,18 +500,20 @@ TOOLTEST() { # Run test. TESTING $H5DIFF $@ ( - #echo "#############################" - #echo "Expected output for '$H5DIFF $@'" - #echo "#############################" - cd $TESTDIR - eval $RUNCMD $H5DIFF_BIN "$@" + #echo "#############################" + #echo "Expected output for '$H5DIFF $@'" + #echo "#############################" + cd $TESTDIR + eval $RUNCMD $H5DIFF_BIN "$@" ) >$actual 2>$actual_err EXIT_CODE=$? + # save actual and actual_err in case they are needed later. cp $actual $actual_sav STDOUT_FILTER $actual cp $actual_err $actual_err_sav STDERR_FILTER $actual_err + # don't add exit code check in pmode, as it causes failure. (exit code # is from mpirun not tool) # if any problem occurs relate to an exit code, it will be caught in @@ -545,23 +547,24 @@ TOOLTEST() { # is done by serial mode. grep -v "EXIT CODE:" $expect_sorted > $expect_sorted.noexit mv $expect_sorted.noexit $expect_sorted - if $CMP $expect_sorted $actual_sorted; then - echo " PASSED" - else - echo "*FAILED*" - nerrors="`expr $nerrors + 1`" - if test yes = "$verbose"; then - echo "====Expected result ($expect_sorted) differs from actual result ($actual_sorted)" - $DIFF $expect_sorted $actual_sorted |sed 's/^/ /' - echo "====The actual output ($actual_sav)" - sed 's/^/ /' < $actual_sav - echo "====The actual stderr ($actual_err_sav)" - sed 's/^/ /' < $actual_err_sav - echo "====End of actual stderr ($actual_err_sav)" - echo "" + + if $CMP $expect_sorted $actual_sorted; then + echo " PASSED" + else + echo "*FAILED*" + nerrors="`expr $nerrors + 1`" + if test yes = "$verbose"; then + echo "====Expected result ($expect_sorted) differs from actual result ($actual_sorted)" + $DIFF $expect_sorted $actual_sorted |sed 's/^/ /' + echo "====The actual output ($actual_sav)" + sed 's/^/ /' < $actual_sav + echo "====The actual stderr ($actual_err_sav)" + sed 's/^/ /' < $actual_err_sav + echo "====End of actual stderr ($actual_err_sav)" + echo "" + fi fi fi - fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then @@ -1199,6 +1202,11 @@ TOOLTEST h5diff_800.txt -v h5diff_dset1.h5 h5diff_dset2.h5 /g1/array /g1/array TOOLTEST h5diff_801.txt -v h5diff_dset1.h5 h5diff_dset3.h5 /g1/array /g1/array # ############################################################################## +# # dataset subsets +# ############################################################################## +#TRILABS_227 TOOLTEST h5diff_830.txt --enable-error-stack -v h5diff_dset1.h5 h5diff_dset2.h5 /g1/array3D[0,0,0;2,2,1;2,2,2;] /g1/array3D[0,0,0;2,2,1;2,2,2;] + +# ############################################################################## # VDS tests # ############################################################################## TOOLTEST h5diff_v1.txt -v 1_vds.h5 2_vds.h5 diff --git a/tools/test/h5dump/h5dump_plugin.sh.in b/tools/test/h5dump/h5dump_plugin.sh.in index 6a97fd1..a552f60 100644 --- a/tools/test/h5dump/h5dump_plugin.sh.in +++ b/tools/test/h5dump/h5dump_plugin.sh.in @@ -181,8 +181,8 @@ TOOLTEST() { # Run test. TESTING $H5DUMP $@ ( - cd $TESTDIR - $ENVCMD $RUNSERIAL $H5DUMP_BIN "$@" + cd $TESTDIR + $ENVCMD $RUNSERIAL $H5DUMP_BIN "$@" ) >$actual 2>$actual_err # save actual and actual_err in case they are needed later. @@ -192,24 +192,24 @@ TOOLTEST() { STDERR_FILTER $actual_err cat $actual_err >> $actual - if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + if [ ! -f $expect ]; then + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual > /dev/null 2>&1 ; then - echo " PASSED" + echo " PASSED" else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $caseless $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $caseless $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav $actual_ext + rm -f $actual $actual_err $actual_sav $actual_err_sav $actual_ext fi } diff --git a/tools/test/h5dump/testh5dump.sh.in b/tools/test/h5dump/testh5dump.sh.in index d5bd568..686ecfb 100644 --- a/tools/test/h5dump/testh5dump.sh.in +++ b/tools/test/h5dump/testh5dump.sh.in @@ -465,14 +465,14 @@ TESTING() { TOOLTEST() { # check if caseless compare and diff requested if [ "$1" = ignorecase ]; then - caseless="-i" - # replace cmp with diff which runs much longer. - xCMP="$DIFF -i" - shift + caseless="-i" + # replace cmp with diff which runs much longer. + xCMP="$DIFF -i" + shift else - caseless="" - # stick with faster cmp if ignorecase is not requested. - xCMP="$CMP" + caseless="" + # stick with faster cmp if ignorecase is not requested. + xCMP="$CMP" fi expect="$TESTDIR/$1" @@ -485,8 +485,8 @@ TOOLTEST() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err # save actual and actual_err in case they are needed later. @@ -495,24 +495,24 @@ TOOLTEST() { cp $actual_err $actual_err_sav STDERR_FILTER $actual_err - if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + if [ ! -f $expect ]; then + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" elif $xCMP $expect $actual > /dev/null 2>&1 ; then - echo " PASSED" + echo " PASSED" else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $caseless $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $caseless $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav $actual_ext + rm -f $actual $actual_err $actual_sav $actual_err_sav $actual_ext fi } @@ -534,41 +534,41 @@ TOOLTEST2() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" - elif $CMP $expect $actual; then - if [ ! -f $expectdata ]; then - # Create the expect data file if it doesn't yet exist. + # Create the expect file if it doesn't yet exist. echo " CREATED" - cp $actualdata $expectdata - echo " Expected data (*.exp) missing" + cp $actual $expect + echo " Expected result (*.ddl) missing" nerrors="`expr $nerrors + 1`" - elif $CMP $expectdata $actualdata; then - echo " PASSED" - else + elif $CMP $expect $actual; then + if [ ! -f $expectdata ]; then + # Create the expect data file if it doesn't yet exist. + echo " CREATED" + cp $actualdata $expectdata + echo " Expected data (*.exp) missing" + nerrors="`expr $nerrors + 1`" + elif $CMP $expectdata $actualdata; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' + fi + else echo "*FAILED*" - echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" + echo " Expected result (*.ddl) differs from actual result (*.out)" nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' - fi - else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actualdata $actual_err + rm -f $actual $actualdata $actual_err fi } @@ -592,56 +592,55 @@ TOOLTEST2A() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" - elif $CMP $expect $actual; then - if [ ! -f $expectdata ]; then - # Create the expect data file if it doesn't yet exist. + # Create the expect file if it doesn't yet exist. echo " CREATED" - cp $actualdata $expectdata - echo " Expected data (*.exp) missing" + cp $actual $expect + echo " Expected result (*.ddl) missing" nerrors="`expr $nerrors + 1`" - elif $DIFF $expectdata $actualdata; then - if [ ! -f $expectmeta ]; then - # Create the expect meta file if it doesn't yet exist. - echo " CREATED" - cp $actualmeta $expectmeta - echo " Expected metafile (*.ddl) missing" - nerrors="`expr $nerrors + 1`" - elif $CMP $expectmeta $actualmeta; then - echo " PASSED" + elif $CMP $expect $actual; then + if [ ! -f $expectdata ]; then + # Create the expect data file if it doesn't yet exist. + echo " CREATED" + cp $actualdata $expectdata + echo " Expected data (*.exp) missing" + nerrors="`expr $nerrors + 1`" + elif $DIFF $expectdata $actualdata; then + if [ ! -f $expectmeta ]; then + # Create the expect meta file if it doesn't yet exist. + echo " CREATED" + cp $actualmeta $expectmeta + echo " Expected metafile (*.ddl) missing" + nerrors="`expr $nerrors + 1`" + elif $CMP $expectmeta $actualmeta; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected metafile (*.ddl) differs from actual metafile (*.txt)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expectmeta $actualmeta |sed 's/^/ /' + fi else - echo "*FAILED*" - echo " Expected metafile (*.ddl) differs from actual metafile (*.txt)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expectmeta $actualmeta |sed 's/^/ /' + echo "*FAILED*" + echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' fi - else + else echo "*FAILED*" - echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" + echo " Expected result (*.ddl) differs from actual result (*.out)" nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' - fi - else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actualdata $actual_err $actualmeta + rm -f $actual $actualdata $actual_err $actualmeta fi - } # same as TOOLTEST2 but only compares the generated data file to the expected data file @@ -658,28 +657,28 @@ TOOLTEST2B() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err if [ ! -f $expectdata ]; then - # Create the expect data file if it doesn't yet exist. - echo " CREATED" - cp $actualdata $expectdata - echo " Expected data (*.exp) missing" - nerrors="`expr $nerrors + 1`" + # Create the expect data file if it doesn't yet exist. + echo " CREATED" + cp $actualdata $expectdata + echo " Expected data (*.exp) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expectdata $actualdata; then - echo " PASSED" + echo " PASSED" else - echo "*FAILED*" - echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' + echo "*FAILED*" + echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actualdata $actual_err + rm -f $actual $actualdata $actual_err fi } @@ -699,8 +698,8 @@ TOOLTEST3() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err # save actual and actual_err in case they are needed later. @@ -719,23 +718,23 @@ TOOLTEST3() { $actual_err > $actual_ext if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual; then - echo " PASSED" + echo " PASSED" else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav + rm -f $actual $actual_err $actual_sav $actual_err_sav fi } @@ -757,8 +756,8 @@ TOOLTEST4() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $ENVCMD $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $ENVCMD $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err # save actual and actual_err in case they are needed later. @@ -777,30 +776,30 @@ TOOLTEST4() { $actual_err > $actual_ext if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual; then - if $CMP $expect_err $actual_ext; then - echo " PASSED" - else - echo "*FAILED*" - echo " Expected result (*.err) differs from actual result (*.oerr)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect_err $actual_ext |sed 's/^/ /' - fi + if $CMP $expect_err $actual_ext; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected result (*.err) differs from actual result (*.oerr)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect_err $actual_ext |sed 's/^/ /' + fi else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav + rm -f $actual $actual_err $actual_sav $actual_err_sav fi } @@ -822,8 +821,8 @@ TOOLTEST5() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $ENVCMD $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $ENVCMD $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err # save actual and actual_err in case they are needed later. @@ -842,33 +841,62 @@ TOOLTEST5() { $actual_err > $actual_ext if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual; then - if $CMP $expect_err $actual_ext; then - echo " PASSED" - else - echo "*FAILED*" - echo " Expected result (*.err) differs from actual result (*.oerr)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect_err $actual_ext |sed 's/^/ /' - fi + if $CMP $expect_err $actual_ext; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected result (*.err) differs from actual result (*.oerr)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect_err $actual_ext |sed 's/^/ /' + fi else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav + rm -f $actual $actual_err $actual_sav $actual_err_sav + fi +} + +# same as TOOLTEST1 but expects h5dump to fail +# +TOOLTEST_FAIL() { + + infile=$1 + expect="$TESTDIR/`basename $1 exp`.ddl" + actual="$TESTDIR/`basename $1 .exp`.out" + + # Run test. + TESTING $DUMPER $@ + ( + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" $infile + ) >&$actual + RET=$? + # Segfault occurred + if [ $RET == 139 ] ; then + nerrors="`expr $nerrors + 1`" + echo "*FAILED - test on $infile failed with segmentation fault" + # Should fail but didn't + elif [ $RET == 0 ] ; then + nerrors="`expr $nerrors + 1`" + echo "*FAILED - test on $infile did not fail as expected" + else + echo " PASSED" fi } + # ADD_HELP_TEST TOOLTEST_HELP() { @@ -880,27 +908,27 @@ TOOLTEST_HELP() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err if [ ! -f $expectdata ]; then - # Create the expect data file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect-CREATED - echo " Expected output (*.txt) missing" - nerrors="`expr $nerrors + 1`" + # Create the expect data file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect-CREATED + echo " Expected output (*.txt) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual; then - echo " PASSED" + echo " PASSED" else - echo "*FAILED*" - echo " Expected output (*.txt) differs from actual output (*.out)" - nerrors="`expr $nerrors + 1`" + echo "*FAILED*" + echo " Expected output (*.txt) differs from actual output (*.out)" + nerrors="`expr $nerrors + 1`" fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err + rm -f $actual $actual_err fi } @@ -920,14 +948,16 @@ GREPTEST() # Run test. TESTING $DUMPER -p $@ ( - cd $TESTDIR - $ENVCMD $RUNSERIAL $DUMPER_BIN -p "$@" + cd $TESTDIR + $ENVCMD $RUNSERIAL $DUMPER_BIN -p "$@" ) >$actual 2>$actual_err + if [ "$txttype" = "ERRTXT" ]; then $GREP "$expectdata" $actual_err > /dev/null else $GREP "$expectdata" $actual > /dev/null fi + if [ $? -eq 0 ]; then echo " PASSED" else @@ -937,7 +967,7 @@ GREPTEST() # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err + rm -f $actual $actual_err fi } @@ -956,14 +986,16 @@ GREPTEST2() # Run test. TESTING $DUMPER -p $@ ( - cd $TESTDIR - $ENVCMD $RUNSERIAL $DUMPER_BIN -p "$@" + cd $TESTDIR + $ENVCMD $RUNSERIAL $DUMPER_BIN -p "$@" ) >$actual 2>$actual_err + if [ "$txttype" = "ERRTXT" ]; then $GREP "$expectdata" $actual_err > /dev/null else $GREP "$expectdata" $actual > /dev/null fi + if [ $? -eq 0 ]; then echo " PASSED" else @@ -973,21 +1005,21 @@ GREPTEST2() # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err + rm -f $actual $actual_err fi } # Print a "SKIP" message SKIP() { - TESTING $DUMPER $@ + TESTING $DUMPER $@ echo " -SKIP-" } # Print a line-line message left justified in a field of 70 characters # PRINT_H5DIFF() { - SPACES=" " - echo " Running h5diff $* $SPACES" | cut -c1-70 | tr -d '\012' + SPACES=" " + echo " Running h5diff $* $SPACES" | cut -c1-70 | tr -d '\012' } @@ -997,10 +1029,11 @@ DIFFTEST() { PRINT_H5DIFF $@ ( - cd $TESTDIR - $RUNSERIAL $H5DIFF_BIN "$@" -q + cd $TESTDIR + $RUNSERIAL $H5DIFF_BIN "$@" -q ) RET=$? + if [ $RET != 0 ] ; then echo "*FAILED*" nerrors="`expr $nerrors + 1`" @@ -1014,8 +1047,8 @@ DIFFTEST() # beginning with the word "Verifying". # PRINT_H5IMPORT() { - SPACES=" " - echo " Running h5import $* $SPACES" | cut -c1-70 | tr -d '\012' + SPACES=" " + echo " Running h5import $* $SPACES" | cut -c1-70 | tr -d '\012' } # Call the h5import tool @@ -1025,15 +1058,16 @@ IMPORTTEST() # remove the output hdf5 file if it exists hdf5_file="$TESTDIR/$5" if [ -f $hdf5_file ]; then - rm -f $hdf5_file + rm -f $hdf5_file fi PRINT_H5IMPORT $@ ( - cd $TESTDIR - $RUNSERIAL $H5IMPORT_BIN "$@" + cd $TESTDIR + $RUNSERIAL $H5IMPORT_BIN "$@" ) RET=$? + if [ $RET != 0 ] ; then echo "*FAILED*" nerrors="`expr $nerrors + 1`" @@ -1138,9 +1172,9 @@ TOOLTEST tcomp-4.ddl --enable-error-stack tcompound_complex.h5 TOOLTEST tcompound_complex2.ddl --enable-error-stack tcompound_complex2.h5 # tests for bitfields and opaque data types if test $WORDS_BIGENDIAN != "yes"; then -TOOLTEST tbitnopaque_le.ddl --enable-error-stack tbitnopaque.h5 + TOOLTEST tbitnopaque_le.ddl --enable-error-stack tbitnopaque.h5 else -TOOLTEST tbitnopaque_be.ddl --enable-error-stack tbitnopaque.h5 + TOOLTEST tbitnopaque_be.ddl --enable-error-stack tbitnopaque.h5 fi #test for the nested compound type @@ -1318,12 +1352,12 @@ TOOLTEST tallfilters.ddl --enable-error-stack -H -p -d all tfilters.h5 TOOLTEST tuserfilter.ddl --enable-error-stack -H -p -d myfilter tfilters.h5 if test $USE_FILTER_DEFLATE = "yes" ; then - # data read internal filters - TOOLTEST treadintfilter.ddl --enable-error-stack -d deflate -d shuffle -d fletcher32 -d nbit -d scaleoffset tfilters.h5 - if test $USE_FILTER_SZIP = "yes"; then - # data read - TOOLTEST treadfilter.ddl --enable-error-stack -d all -d szip tfilters.h5 - fi + # data read internal filters + TOOLTEST treadintfilter.ddl --enable-error-stack -d deflate -d shuffle -d fletcher32 -d nbit -d scaleoffset tfilters.h5 + if test $USE_FILTER_SZIP = "yes"; then + # data read + TOOLTEST treadfilter.ddl --enable-error-stack -d all -d szip tfilters.h5 + fi fi # test for displaying objects with very long names @@ -1380,9 +1414,9 @@ TOOLTEST tbin4.ddl --enable-error-stack -d double -b FILE -o out4.bin tbin # Clean up binary output files if test -z "$HDF5_NOCLEANUP"; then - rm -f out[1-4].bin - rm -f out1.h5 - rm -f out3.h5 + rm -f out[1-4].bin + rm -f out1.h5 + rm -f out3.h5 fi # test for dataset region references @@ -1394,7 +1428,7 @@ TOOLTEST2 tbinregR.exp --enable-error-stack -d /Dataset1 -s 0 -R -y -o tbinregR. # Clean up text output files if test -z "$HDF5_NOCLEANUP"; then - rm -f tbinregR.txt + rm -f tbinregR.txt fi # tests for group creation order diff --git a/tools/test/h5dump/testh5dumppbits.sh.in b/tools/test/h5dump/testh5dumppbits.sh.in index 2c8a0c9..6689749 100644 --- a/tools/test/h5dump/testh5dumppbits.sh.in +++ b/tools/test/h5dump/testh5dumppbits.sh.in @@ -236,26 +236,25 @@ TOOLTEST() { cp $actual_err $actual_err_sav STDERR_FILTER $actual_err - if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + if [ ! -f $expect ]; then + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual; then - echo " PASSED" + echo " PASSED" else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav $actual_ext + rm -f $actual $actual_err $actual_sav $actual_err_sav $actual_ext fi - } @@ -274,36 +273,36 @@ TOOLTEST2() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" - elif $CMP $expect $actual; then - if [ ! -f $expectdata ]; then - # Create the expect data file if it doesn't yet exist. + # Create the expect file if it doesn't yet exist. echo " CREATED" - cp $actualdata $expectdata - echo " Expected data (*.exp) missing" + cp $actual $expect + echo " Expected result (*.ddl) missing" nerrors="`expr $nerrors + 1`" - elif $CMP $expectdata $actualdata; then - echo " PASSED" - else + elif $CMP $expect $actual; then + if [ ! -f $expectdata ]; then + # Create the expect data file if it doesn't yet exist. + echo " CREATED" + cp $actualdata $expectdata + echo " Expected data (*.exp) missing" + nerrors="`expr $nerrors + 1`" + elif $CMP $expectdata $actualdata; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' + fi + else echo "*FAILED*" - echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" + echo " Expected result (*.ddl) differs from actual result (*.out)" nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' - fi - else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file @@ -328,8 +327,8 @@ TOOLTEST3() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err # save actual and actual_err in case they are needed later. @@ -348,23 +347,23 @@ TOOLTEST3() { $actual_err > $actual_ext if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual; then - echo " PASSED" + echo " PASSED" else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav + rm -f $actual $actual_err $actual_sav $actual_err_sav fi } @@ -385,8 +384,8 @@ TOOLTEST4() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err # save actual and actual_err in case they are needed later. @@ -405,30 +404,30 @@ TOOLTEST4() { $actual_err > $actual_ext if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual; then - if $CMP $expect_err $actual_ext; then - echo " PASSED" - else - echo "*FAILED*" - echo " Expected result (*.err) differs from actual result (*.oerr)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect_err $actual_ext |sed 's/^/ /' - fi + if $CMP $expect_err $actual_ext; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected result (*.err) differs from actual result (*.oerr)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect_err $actual_ext |sed 's/^/ /' + fi else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav + rm -f $actual $actual_err $actual_sav $actual_err_sav fi } @@ -442,8 +441,8 @@ SKIP() { # Print a line-line message left justified in a field of 70 characters # PRINT_H5DIFF() { - SPACES=" " - echo " Running h5diff $* $SPACES" | cut -c1-70 | tr -d '\012' + SPACES=" " + echo " Running h5diff $* $SPACES" | cut -c1-70 | tr -d '\012' } @@ -453,10 +452,11 @@ DIFFTEST() { PRINT_H5DIFF $@ ( - cd $TESTDIR - $RUNSERIAL $H5DIFF_BIN "$@" -q + cd $TESTDIR + $RUNSERIAL $H5DIFF_BIN "$@" -q ) RET=$? + if [ $RET != 0 ] ; then echo "*FAILED*" nerrors="`expr $nerrors + 1`" @@ -470,8 +470,8 @@ DIFFTEST() # beginning with the word "Verifying". # PRINT_H5IMPORT() { - SPACES=" " - echo " Running h5import $* $SPACES" | cut -c1-70 | tr -d '\012' + SPACES=" " + echo " Running h5import $* $SPACES" | cut -c1-70 | tr -d '\012' } # Call the h5import tool @@ -481,22 +481,22 @@ IMPORTTEST() # remove the output hdf5 file if it exists hdf5_file="$TESTDIR/$5" if [ -f $hdf5_file ]; then - rm -f $hdf5_file + rm -f $hdf5_file fi PRINT_H5IMPORT $@ ( - cd $TESTDIR - $RUNSERIAL $H5IMPORT_BIN "$@" + cd $TESTDIR + $RUNSERIAL $H5IMPORT_BIN "$@" ) RET=$? + if [ $RET != 0 ] ; then echo "*FAILED*" nerrors="`expr $nerrors + 1`" else echo " PASSED" fi - } diff --git a/tools/test/h5dump/testh5dumpvds.sh.in b/tools/test/h5dump/testh5dumpvds.sh.in index 8381063..f2c486e 100644 --- a/tools/test/h5dump/testh5dumpvds.sh.in +++ b/tools/test/h5dump/testh5dumpvds.sh.in @@ -205,8 +205,8 @@ TOOLTEST() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err # save actual and actual_err in case they are needed later. @@ -216,26 +216,25 @@ TOOLTEST() { STDERR_FILTER $actual_err cat $actual_err >> $actual - if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + if [ ! -f $expect ]; then + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual; then - echo " PASSED" + echo " PASSED" else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav $actual_ext + rm -f $actual $actual_err $actual_sav $actual_err_sav $actual_ext fi - } @@ -254,42 +253,42 @@ TOOLTEST2() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err cat $actual_err >> $actual if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" - elif $CMP $expect $actual; then - if [ ! -f $expectdata ]; then - # Create the expect data file if it doesn't yet exist. + # Create the expect file if it doesn't yet exist. echo " CREATED" - cp $actualdata $expectdata - echo " Expected data (*.exp) missing" + cp $actual $expect + echo " Expected result (*.ddl) missing" nerrors="`expr $nerrors + 1`" - elif $CMP $expectdata $actualdata; then - echo " PASSED" - else + elif $CMP $expect $actual; then + if [ ! -f $expectdata ]; then + # Create the expect data file if it doesn't yet exist. + echo " CREATED" + cp $actualdata $expectdata + echo " Expected data (*.exp) missing" + nerrors="`expr $nerrors + 1`" + elif $CMP $expectdata $actualdata; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' + fi + else echo "*FAILED*" - echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" + echo " Expected result (*.ddl) differs from actual result (*.out)" nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' - fi - else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actualdata $actual_err + rm -f $actual $actualdata $actual_err fi } @@ -309,8 +308,8 @@ TOOLTEST3() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err # save actual and actual_err in case they are needed later. @@ -326,27 +325,27 @@ TOOLTEST3() { -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ -e 's/H5Eget_auto[1-2]*/H5Eget_auto(1 or 2)/' \ -e 's/H5Eset_auto[1-2]*/H5Eset_auto(1 or 2)/' \ - $actual_err > $actual_ext + $actual_err > $actual_ext cat $actual_ext >> $actual if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual; then - echo " PASSED" + echo " PASSED" else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav + rm -f $actual $actual_err $actual_sav $actual_err_sav fi } @@ -367,8 +366,8 @@ TOOLTEST4() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err # save actual and actual_err in case they are needed later. @@ -384,47 +383,46 @@ TOOLTEST4() { -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ -e 's/H5Eget_auto[1-2]*/H5Eget_auto(1 or 2)/' \ -e 's/H5Eset_auto[1-2]*/H5Eset_auto(1 or 2)/' \ - $actual_err > $actual_ext + $actual_err > $actual_ext #cat $actual_ext >> $actual if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect elif $CMP $expect $actual; then - if $CMP $expect_err $actual_ext; then - echo " PASSED" - else - echo "*FAILED*" - echo " Expected result (*.err) differs from actual result (*.oerr)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect_err $actual_ext |sed 's/^/ /' - fi + if $CMP $expect_err $actual_ext; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected result (*.err) differs from actual result (*.oerr)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect_err $actual_ext |sed 's/^/ /' + fi else - echo "*FAILED*" - echo " Expected result (*.ddl) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err $actual_sav $actual_err_sav + rm -f $actual $actual_err $actual_sav $actual_err_sav fi - } # Print a "SKIP" message SKIP() { - TESTING $DUMPER $@ + TESTING $DUMPER $@ echo " -SKIP-" } # Print a line-line message left justified in a field of 70 characters # PRINT_H5DIFF() { - SPACES=" " - echo " Running h5diff $* $SPACES" | cut -c1-70 | tr -d '\012' + SPACES=" " + echo " Running h5diff $* $SPACES" | cut -c1-70 | tr -d '\012' } @@ -434,25 +432,25 @@ DIFFTEST() { PRINT_H5DIFF $@ ( - cd $TESTDIR - $RUNSERIAL $H5DIFF_BIN "$@" -q + cd $TESTDIR + $RUNSERIAL $H5DIFF_BIN "$@" -q ) RET=$? + if [ $RET != 0 ] ; then echo "*FAILED*" nerrors="`expr $nerrors + 1`" else echo " PASSED" fi - } # Print a line-line message left justified in a field of 70 characters # beginning with the word "Verifying". # PRINT_H5IMPORT() { - SPACES=" " - echo " Running h5import $* $SPACES" | cut -c1-70 | tr -d '\012' + SPACES=" " + echo " Running h5import $* $SPACES" | cut -c1-70 | tr -d '\012' } # Call the h5import tool @@ -462,22 +460,22 @@ IMPORTTEST() # remove the output hdf5 file if it exists hdf5_file="$TESTDIR/$5" if [ -f $hdf5_file ]; then - rm -f $hdf5_file + rm -f $hdf5_file fi PRINT_H5IMPORT $@ ( - cd $TESTDIR - $RUNSERIAL $H5IMPORT_BIN "$@" + cd $TESTDIR + $RUNSERIAL $H5IMPORT_BIN "$@" ) RET=$? + if [ $RET != 0 ] ; then echo "*FAILED*" nerrors="`expr $nerrors + 1`" else echo " PASSED" fi - } @@ -491,7 +489,7 @@ COPY_TESTFILES_TO_TESTDIR ####### test for dataset vds ###### - # Data read +# Data read if test $USE_FILTER_DEFLATE = "yes" ; then TOOLTEST tvds-1.ddl --enable-error-stack 1_vds.h5 TOOLTEST tvds-2.ddl --enable-error-stack 2_vds.h5 @@ -504,7 +502,7 @@ if test $USE_FILTER_DEFLATE = "yes" ; then TOOLTEST vds-gap2.ddl --vds-gap-size=2 --enable-error-stack vds-eiger.h5 fi - # Layout read +# Layout read if test $USE_FILTER_DEFLATE = "yes" ; then TOOLTEST tvds_layout-1.ddl -p --enable-error-stack 1_vds.h5 TOOLTEST tvds_layout-2.ddl -p --enable-error-stack 2_vds.h5 diff --git a/tools/test/h5dump/testh5dumpxml.sh.in b/tools/test/h5dump/testh5dumpxml.sh.in index 2eda110..447c819 100644 --- a/tools/test/h5dump/testh5dumpxml.sh.in +++ b/tools/test/h5dump/testh5dumpxml.sh.in @@ -262,36 +262,35 @@ TOOLTEST() { # Run test. TESTING $DUMPER $@ ( - cd $TESTDIR - $RUNSERIAL $DUMPER_BIN "$@" + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err - if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.xml) missing" - nerrors="`expr $nerrors + 1`" + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.xml) missing" + nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual; then - echo " PASSED" + echo " PASSED" else - echo "*FAILED*" - echo " Expected result (*.xml) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + echo "*FAILED*" + echo " Expected result (*.xml) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err + rm -f $actual $actual_err fi } # Print a "SKIP" message SKIP() { - TESTING $DUMPER $@ - echo " -SKIP-" + TESTING $DUMPER $@ + echo " -SKIP-" } diff --git a/tools/test/h5jam/getub.c b/tools/test/h5jam/getub.c index a21c2af..a9b4437 100644 --- a/tools/test/h5jam/getub.c +++ b/tools/test/h5jam/getub.c @@ -138,14 +138,15 @@ main(int argc, const char *argv[]) } /* end if */ /* close things and exit */ + HDfree(filename); HDfree(buf); HDclose(fd); return EXIT_SUCCESS; error: - if (buf) - HDfree(buf); + HDfree(filename); + HDfree(buf); if (fd >= 0) HDclose(fd); return EXIT_FAILURE; diff --git a/tools/test/h5ls/h5ls_plugin.sh.in b/tools/test/h5ls/h5ls_plugin.sh.in index 2d45f59..29e982d 100644 --- a/tools/test/h5ls/h5ls_plugin.sh.in +++ b/tools/test/h5ls/h5ls_plugin.sh.in @@ -139,8 +139,8 @@ CLEAN_TESTFILES_AND_TESTDIR() # Print a $* message left justified in a field of 70 characters # MESSAGE() { - SPACES=" " - echo "$* $SPACES" | cut -c1-70 | tr -d '\012' + SPACES=" " + echo "$* $SPACES" | cut -c1-70 | tr -d '\012' } # Print a line-line message left justified in a field of 70 characters @@ -206,7 +206,7 @@ TOOLTEST() { echo "" fi elif [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. + # Create the expect file if it doesn't yet exist. echo " CREATED" cp $actual $expect echo " Expected result (*.ls) missing" diff --git a/tools/test/h5repack/h5repack.sh.in b/tools/test/h5repack/h5repack.sh.in index fadc143..8f3ed8c 100644 --- a/tools/test/h5repack/h5repack.sh.in +++ b/tools/test/h5repack/h5repack.sh.in @@ -271,6 +271,12 @@ SKIP() { echo " -SKIP-" } +############################################################################## +############################################################################## +### T H E T E S T S M A C R O S ### +############################################################################## +############################################################################## + # Call the h5diff tool # DIFFTEST() @@ -620,6 +626,7 @@ VERIFY_INVALIDBOUNDS() # ----------------------------------------------------------------------------- # Expect h5diff to fail +# Use only by VERIFY_EXTERNAL_CONSOLIDATION # ----------------------------------------------------------------------------- DIFFFAIL() { @@ -629,7 +636,7 @@ DIFFFAIL() $RUNSERIAL $H5DIFF_BIN -q "$@" ) RET=$? - if [ $RET == 0 ] ; then + if [ $RET -eq 0 ] ; then echo "*FAILED*" nerrors="`expr $nerrors + 1`" else @@ -1356,44 +1363,28 @@ TOOLTEST_STAT SPT $arg # layout options (these files have no filters) ######################################################### VERIFY_LAYOUT_DSET dset2_chunk_20x10 h5repack_layout.h5 dset2 CHUNKED --layout dset2:CHUNK=20x10 - VERIFY_LAYOUT_ALL chunk_20x10 h5repack_layout.h5 CHUNKED -l CHUNK=20x10 - VERIFY_LAYOUT_DSET dset2_conti h5repack_layout.h5 dset2 CONTIGUOUS -l dset2:CONTI - VERIFY_LAYOUT_ALL conti h5repack_layout.h5 CONTIGUOUS -l CONTI - VERIFY_LAYOUT_DSET dset2_compa h5repack_layout.h5 dset2 COMPACT -l dset2:COMPA - VERIFY_LAYOUT_ALL compa h5repack_layout.h5 COMPACT -l COMPA - TOOLTESTM dset2_chunk_20x10-errstk h5repack_layout.h5 --layout=dset2:CHUNK=20x10x5 --enable-error-stack ################################################################ # layout conversions (file has no filters) ############################################################### - VERIFY_LAYOUT_DSET dset_compa_conti h5repack_layout.h5 dset_compact CONTIGUOUS -l dset_compact:CONTI - VERIFY_LAYOUT_DSET dset_compa_chunk h5repack_layout.h5 dset_compact CHUNKED -l dset_compact:CHUNK=2x5 - VERIFY_LAYOUT_DSET dset_compa_compa h5repack_layout.h5 dset_compact COMPACT -l dset_compact:COMPA - VERIFY_LAYOUT_DSET dset_conti_compa h5repack_layout.h5 dset_contiguous COMPACT -l dset_contiguous:COMPA - VERIFY_LAYOUT_DSET dset_conti_chunk h5repack_layout.h5 dset_contiguous CHUNKED -l dset_contiguous:CHUNK=3x6 - VERIFY_LAYOUT_DSET dset_conti_conti h5repack_layout.h5 dset_contiguous CONTIGUOUS -l dset_contiguous:CONTI - VERIFY_LAYOUT_DSET chunk_compa h5repack_layout.h5 dset_chunk COMPACT -l dset_chunk:COMPA - VERIFY_LAYOUT_DSET chunk_conti h5repack_layout.h5 dset_chunk CONTIGUOUS -l dset_chunk:CONTI - VERIFY_LAYOUT_DSET chunk_18x13 h5repack_layout.h5 dset_chunk CHUNKED -l dset_chunk:CHUNK=18x13 # test convert small size dataset ( < 1k) to compact layout without -m VERIFY_LAYOUT_DSET contig_small_compa h5repack_layout2.h5 contig_small COMPACT -l contig_small:COMPA - VERIFY_LAYOUT_DSET contig_small_fixed_compa h5repack_layout2.h5 chunked_small_fixed COMPACT -l chunked_small_fixed:COMPA #--------------------------------------------------------------------------- @@ -1421,6 +1412,7 @@ VERIFY_LAYOUT_DSET chunk2compa h5repack_layout3.h5 chunk_unlimit1 CHUNK -l chunk # chunk dim is bigger than dataset dim. ( dset size < 64k ) VERIFY_LAYOUT_DSET error1 h5repack_layout3.h5 chunk_unlimit1 H5S_UNLIMITED -f chunk_unlimit1:NONE # chunk dim is bigger than dataset dim. ( dset size > 64k ) + VERIFY_LAYOUT_DSET error2 h5repack_layout3.h5 chunk_unlimit2 H5S_UNLIMITED -f chunk_unlimit2:NONE # chunk dims are smaller than dataset dims. ( dset size < 64k ) @@ -1435,7 +1427,6 @@ TOOLTEST error4 h5repack_layout3.h5 -f NONE # (dset size < 64K) and with unlimited max dims on a condition as follow. # (HDFFV-8214) #-------------------------------------------------------------------------- - # chunk dim is bigger than dataset dim. should succeed. VERIFY_LAYOUT_DSET ckdim_biger h5repack_layout3.h5 chunk_unlimit2 CONTI -l chunk_unlimit2:CONTI # chunk dim is smaller than dataset dim. should succeed. @@ -1466,7 +1457,6 @@ else fi # several global filters - arg="h5repack_layout.h5 --filter GZIP=1 --filter SHUF" if test $USE_FILTER_DEFLATE != "yes" ; then SKIP $arg @@ -1562,9 +1552,15 @@ else VERIFY_LAYOUT_VDS vds_conti 4_vds.h5 vds_dset CONTIGUOUS -l vds_dset:CONTI fi -######################################################### -# Testing version bounds -######################################################### +################################################################ +# reference new api conversions +############################################################### +#TOOLTEST_DUMP attrregion tattrreg.h5 +#TOOLTEST_DUMP dataregion tdatareg.h5 + +############################################################################## +### V E R S I O N B O U N D S T E S T S +############################################################################## # -j 0 -k 2, superblock will be 0 VERIFY_SUPERBLOCK 0 2 0 h5repack_layout.h5 -j 0 -k 2 h5repack_layout.h5 # -j 1 -k 2, superblock will be 2 @@ -1574,9 +1570,9 @@ VERIFY_SUPERBLOCK 2 2 3 h5repack_layout.h5 -j 2 -k 2 h5repack_layout.h5 # -j 0 -k 1, file cannot be opened VERIFY_INVALIDBOUNDS 0 1 bounds_latest_latest.h5 -######################################## -# Testing external storage -######################################## +############################################################################## +### E X T E R N A L S T O R A G E T E S T S +############################################################################## VERIFY_EXTERNAL_CONSOLIDATION -l CONTI # Clean up temporary files/directories diff --git a/tools/test/misc/h5perf_gentest.c b/tools/test/misc/h5perf_gentest.c index a3a781b..332e49c 100644 --- a/tools/test/misc/h5perf_gentest.c +++ b/tools/test/misc/h5perf_gentest.c @@ -14,7 +14,7 @@ creates a large number of attributes, groups, and datasets by specifying -a, -g, -d options respectively. Using "-h" option to see details. - Programmer: Peter Cao <xcao@hdfgroup.org>, Jan. 2013 + Programmer: Peter Cao, Jan. 2013 ****************************************************************************/ #include "hdf5.h" @@ -128,7 +128,7 @@ main(int argc, char *argv[]) Return: Non-negative on success/Negative on failure - Programmer: Peter Cao <xcao@hdfgroup.org>, Jan. 2013 + Programmer: Peter Cao, Jan. 2013 ****************************************************************************/ herr_t create_perf_test_file(const char *fname, int ngrps, int ndsets, int nattrs, hsize_t nrows, hsize_t dim0, diff --git a/tools/test/misc/h5repart_gentest.c b/tools/test/misc/h5repart_gentest.c index dc228f3..b068985 100644 --- a/tools/test/misc/h5repart_gentest.c +++ b/tools/test/misc/h5repart_gentest.c @@ -12,7 +12,7 @@ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* - * Programmer: Raymond Lu<slu@ncsa.uiuc.edu> + * Programmer: Raymond Lu * June 1, 2005 * * Purpose: Generate a family file of 1024 bytes for each member diff --git a/tools/test/misc/testh5mkgrp.sh.in b/tools/test/misc/testh5mkgrp.sh.in index 9f3c4f7..5cd852a 100644 --- a/tools/test/misc/testh5mkgrp.sh.in +++ b/tools/test/misc/testh5mkgrp.sh.in @@ -13,7 +13,7 @@ # # Tests for the h5mkgrp tool # -# Quincey Koziol (koziol@hdfgroup.org) +# Quincey Koziol # Tuesday, February 13, 2007 # @@ -150,10 +150,11 @@ TOOLTEST() { TESTING $H5MKGRP $@ ( - cd $TESTDIR - $RUNSERIAL $H5MKGRP_BIN $@ + cd $TESTDIR + $RUNSERIAL $H5MKGRP_BIN $@ ) > output.out RET=$? + if [ $RET != 0 ]; then echo "*FAILED*" echo "failed result is:" @@ -164,7 +165,7 @@ TOOLTEST() # Clean up output file if test -z "$HDF5_NOCLEANUP"; then - rm -f output.out + rm -f output.out fi fi } @@ -181,8 +182,8 @@ H5LSTEST() # any unexpected output from that stream too. VERIFY_H5LS $@ ( - cd $TESTDIR - $RUNSERIAL $H5LS_BIN $H5LS_ARGS $@ + cd $TESTDIR + $RUNSERIAL $H5LS_BIN $H5LS_ARGS $@ ) 2>&1 |sed 's/Modified:.*/Modified: XXXX-XX-XX XX:XX:XX XXX/' >$actual # save actual in case it is needed later. @@ -190,25 +191,25 @@ H5LSTEST() STDOUT_FILTER $actual STDERR_FILTER $actual - if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ls) missing" - nerrors="`expr $nerrors + 1`" - elif $CMP $expect $actual; then - echo " PASSED" - else - echo "*FAILED*" - echo " Expected result (*.ls) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' - fi - - # Clean up output file - if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_sav - fi + if [ ! -f $expect ]; then + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ls) missing" + nerrors="`expr $nerrors + 1`" + elif $CMP $expect $actual; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected result (*.ls) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + fi + + # Clean up output file + if test -z "$HDF5_NOCLEANUP"; then + rm -f $actual $actual_sav + fi } # Single run of tool @@ -258,30 +259,30 @@ CMPTEST() # any unexpected output from that stream too. TESTING $H5MKGRP $@ ( - cd $TESTDIR - $RUNSERIAL $H5MKGRP_BIN $@ + cd $TESTDIR + $RUNSERIAL $H5MKGRP_BIN $@ ) >$actual 2>$actual_err cat $actual_err >> $actual - if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.txt) missing" - nerrors="`expr $nerrors + 1`" - elif $CMP $expect $actual; then - echo " PASSED" - else - echo "*FAILED*" - echo " Expected result (*.txt) differs from actual result (*.out)" - nerrors="`expr $nerrors + 1`" - test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' - fi - - # Clean up output file - if test -z "$HDF5_NOCLEANUP"; then - rm -f $actual $actual_err - fi + if [ ! -f $expect ]; then + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.txt) missing" + nerrors="`expr $nerrors + 1`" + elif $CMP $expect $actual; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected result (*.txt) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + fi + + # Clean up output file + if test -z "$HDF5_NOCLEANUP"; then + rm -f $actual $actual_err + fi } ############################################################################## diff --git a/tools/test/perform/chunk.c b/tools/test/perform/chunk.c index 397954a..ada2ed3 100644 --- a/tools/test/perform/chunk.c +++ b/tools/test/perform/chunk.c @@ -12,7 +12,7 @@ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* - * Programmer: Robb Matzke <robb@arborea.spizella.com> + * Programmer: Robb Matzke * Thursday, May 14, 1998 * * Purpose: Checks the effect of various I/O request sizes and raw data diff --git a/tools/test/perform/chunk_cache.c b/tools/test/perform/chunk_cache.c index c4bdb4b..fcaa337 100644 --- a/tools/test/perform/chunk_cache.c +++ b/tools/test/perform/chunk_cache.c @@ -98,7 +98,7 @@ create_dset1(hid_t file) hid_t dcpl = H5I_INVALID_HID; hsize_t dims[RANK] = {DSET1_DIM1, DSET1_DIM2}; hsize_t chunk_dims[RANK] = {CHUNK1_DIM1, CHUNK1_DIM2}; - int ** data; /* data for writing */ + int ** data = NULL; /* data for writing */ /* Create the data space. */ if ((dataspace = H5Screate_simple(RANK, dims, NULL)) < 0) @@ -134,6 +134,7 @@ create_dset1(hid_t file) H5Dclose(dataset); H5Pclose(dcpl); H5Sclose(dataspace); + HDfree(data); return 0; error: @@ -144,6 +145,7 @@ error: H5Sclose(dataspace); } H5E_END_TRY; + HDfree(data); return 1; } @@ -160,7 +162,7 @@ create_dset2(hid_t file) hid_t dcpl = H5I_INVALID_HID; hsize_t dims[RANK] = {DSET2_DIM1, DSET2_DIM2}; hsize_t chunk_dims[RANK] = {CHUNK2_DIM1, CHUNK2_DIM2}; - int ** data; /* data for writing */ + int ** data = NULL; /* data for writing */ /* Create the data space. */ if ((dataspace = H5Screate_simple(RANK, dims, NULL)) < 0) @@ -195,6 +197,7 @@ create_dset2(hid_t file) H5Dclose(dataset); H5Pclose(dcpl); H5Sclose(dataspace); + HDfree(data); return 0; @@ -206,6 +209,7 @@ error: H5Sclose(dataspace); } H5E_END_TRY; + HDfree(data); return 1; } @@ -259,11 +263,11 @@ check_partial_chunks_perf(hid_t file) end_t = H5_get_time(); if ((end_t - start_t) > (double)0.0f) - printf("1. Partial chunks: total read time is %lf; number of bytes being read from file is %lu\n", + printf("1. Partial chunks: total read time is %lf; number of bytes being read from file is %zu\n", (end_t - start_t), nbytes_global); else printf("1. Partial chunks: no total read time because timer is not available; number of bytes being " - "read from file is %lu\n", + "read from file is %zu\n", nbytes_global); H5Dclose(dataset); @@ -337,11 +341,11 @@ check_hash_value_perf(hid_t file) end_t = H5_get_time(); if ((end_t - start_t) > (double)0.0f) - printf("2. Hash value: total read time is %lf; number of bytes being read from file is %lu\n", + printf("2. Hash value: total read time is %lf; number of bytes being read from file is %zu\n", (end_t - start_t), nbytes_global); else printf("2. Hash value: no total read time because timer is not available; number of bytes being read " - "from file is %lu\n", + "from file is %zu\n", nbytes_global); H5Dclose(dataset); diff --git a/tools/test/perform/iopipe.c b/tools/test/perform/iopipe.c index 08c0d7d..68eaa3a 100644 --- a/tools/test/perform/iopipe.c +++ b/tools/test/perform/iopipe.c @@ -12,7 +12,7 @@ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* - * Programmer: Robb Matzke <matzke@llnl.gov> + * Programmer: Robb Matzke * Thursday, March 12, 1998 */ diff --git a/tools/test/perform/overhead.c b/tools/test/perform/overhead.c index ec8c281..dba8220 100644 --- a/tools/test/perform/overhead.c +++ b/tools/test/perform/overhead.c @@ -12,7 +12,7 @@ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* - * Programmer: Robb Matzke <matzke@llnl.gov> + * Programmer: Robb Matzke * Monday, September 28, 1998 * * Purpose: Creates a chunked dataset and measures the storage overhead. diff --git a/tools/test/perform/perf_meta.c b/tools/test/perform/perf_meta.c index f9e1a7f..d8ed9ec 100644 --- a/tools/test/perform/perf_meta.c +++ b/tools/test/perform/perf_meta.c @@ -12,7 +12,7 @@ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* - * Programmer: Raymond Lu <slu@ncsa.uiuc.edu> + * Programmer: Raymond Lu * Friday, Oct 3, 2004 * * Purpose: Tests performance of metadata @@ -818,8 +818,10 @@ main(int argc, char **argv) goto error; #ifdef H5_HAVE_PARALLEL if (facc_type != FACC_DEFAULT && MAINPROCESS) -#endif /*H5_HAVE_PARALLEL*/ printf("All metadata performance tests passed.\n"); +#else + printf("All metadata performance tests passed.\n"); +#endif /*H5_HAVE_PARALLEL*/ return 0; diff --git a/tools/test/perform/pio_perf.h b/tools/test/perform/pio_perf.h index 027b553..24621da 100644 --- a/tools/test/perform/pio_perf.h +++ b/tools/test/perform/pio_perf.h @@ -10,8 +10,8 @@ * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef PIO_PERF_H__ -#define PIO_PERF_H__ +#ifndef PIO_PERF_H +#define PIO_PERF_H #ifndef STANDALONE #include "io_timer.h" @@ -97,4 +97,4 @@ extern results do_pio(parameters param); } #endif /* __cplusplus */ -#endif /* PIO_PERF_H__ */ +#endif /* PIO_PERF_H */ diff --git a/tools/test/perform/pio_standalone.h b/tools/test/perform/pio_standalone.h index 5a3f16d..7c1ac42 100644 --- a/tools/test/perform/pio_standalone.h +++ b/tools/test/perform/pio_standalone.h @@ -10,8 +10,8 @@ * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef PIO_STANDALONE_H__ -#define PIO_PERF_H__ +#ifndef PIO_STANDALONE_H +#define PIO_STANDALONE_H /* Header file for building h5perf by standalone mode. * Created: Christian Chilan, 2005/5/18. @@ -356,7 +356,7 @@ H5_DLL int c99_snprintf(char *str, size_t size, const char *format, ...); #endif /* sprintf() variable arguments */ #define HDsprintf sprintf /*varargs*/ -#define HDsqrt(X) sqrt(X) +#define HDsqrt(X) sqrt(X) #ifdef H5_HAVE_RAND_R H5_DLL void HDsrand(unsigned int seed); #define HDsrandom(S) HDsrand(S) @@ -429,25 +429,25 @@ H5_DLL int64_t HDstrtoll(const char *s, const char **rest, int base); #else #define HDunlink(S) unlink(S) #endif -#define HDutime(S, T) utime(S, T) -#define HDva_arg(A, T) va_arg(A, T) -#define HDva_end(A) va_end(A) -#define HDva_start(A, P) va_start(A, P) -#define HDvasprintf(RET, FMT, A) vasprintf(RET, FMT, A) -#define HDvfprintf(F, FMT, A) vfprintf(F, FMT, A) -#define HDvprintf(FMT, A) vprintf(FMT, A) -#define HDvsprintf(S, FMT, A) vsprintf(S, FMT, A) +#define HDutime(S, T) utime(S, T) +#define HDva_arg(A, T) va_arg(A, T) +#define HDva_end(A) va_end(A) +#define HDva_start(A, P) va_start(A, P) +#define HDvasprintf(RET, FMT, A) vasprintf(RET, FMT, A) +#define HDvfprintf(F, FMT, A) vfprintf(F, FMT, A) +#define HDvprintf(FMT, A) vprintf(FMT, A) +#define HDvsprintf(S, FMT, A) vsprintf(S, FMT, A) #ifdef H5_HAVE_WIN32_API H5_DLL int c99_vsnprintf(char *str, size_t size, const char *format, va_list ap); #define HDvsnprintf c99_vsnprintf #else #define HDvsnprintf(S, N, FMT, A) vsnprintf(S, N, FMT, A) #endif -#define HDwait(W) wait(W) -#define HDwaitpid(P, W, O) waitpid(P, W, O) -#define HDwcstombs(S, P, Z) wcstombs(S, P, Z) -#define HDwctomb(S, C) wctomb(S, C) -#define HDwrite(F, M, Z) write(F, M, Z) +#define HDwait(W) wait(W) +#define HDwaitpid(P, W, O) waitpid(P, W, O) +#define HDwcstombs(S, P, Z) wcstombs(S, P, Z) +#define HDwctomb(S, C) wctomb(S, C) +#define HDwrite(F, M, Z) write(F, M, Z) /* * And now for a couple non-Posix functions... Watch out for systems that |