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-rw-r--r--src/H5C.c47
-rw-r--r--src/H5Cimage.c224
-rw-r--r--src/H5Cpkg.h2
3 files changed, 74 insertions, 199 deletions
diff --git a/src/H5C.c b/src/H5C.c
index 73806ad..a10978b 100644
--- a/src/H5C.c
+++ b/src/H5C.c
@@ -162,9 +162,6 @@ static herr_t H5C__mark_flush_dep_clean(H5C_cache_entry_t * entry);
static herr_t H5C__verify_len_eoa(H5F_t *f, const H5C_class_t * type,
haddr_t addr, size_t *len, hbool_t actual);
-static herr_t H5C__generate_image(H5F_t *f, H5C_t * cache_ptr, H5C_cache_entry_t *entry_ptr,
- hid_t dxpl_id);
-
#if H5C_DO_SLIST_SANITY_CHECKS
static hbool_t H5C_entry_in_skip_list(H5C_t * cache_ptr,
H5C_cache_entry_t *target_ptr);
@@ -869,14 +866,12 @@ done:
herr_t
H5C_evict(H5F_t * f, hid_t dxpl_id)
{
- H5C_t *cache_ptr = f->shared->cache;
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(FAIL)
/* Sanity check */
- HDassert(cache_ptr);
- HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
+ HDassert(f);
/* Flush and invalidate all cache entries except the pinned entries */
if(H5C_flush_invalidate_cache(f, dxpl_id, H5C__EVICT_ALLOW_LAST_PINS_FLAG) < 0 )
@@ -6264,6 +6259,7 @@ H5C__flush_single_entry(H5F_t *f, hid_t dxpl_id, H5C_cache_entry_t *entry_ptr,
HDassert(entry_ptr);
HDassert(entry_ptr->magic == H5C__H5C_CACHE_ENTRY_T_MAGIC);
HDassert(entry_ptr->ring != H5C_RING_UNDEFINED);
+ HDassert(entry_ptr->type);
/* setup external flags from the flags parameter */
destroy = ((flags & H5C__FLUSH_INVALIDATE_FLAG) != 0);
@@ -6339,21 +6335,18 @@ H5C__flush_single_entry(H5F_t *f, hid_t dxpl_id, H5C_cache_entry_t *entry_ptr,
HGOTO_ERROR(H5E_CACHE, H5E_PROTECT, FAIL, "Attempt to flush a protected entry.")
} /* end if */
- /* set entry_ptr->flush_in_progress = TRUE and set
+ /* Set entry_ptr->flush_in_progress = TRUE and set
* entry_ptr->flush_marker = FALSE
*
- * in the parallel case, do some sanity checking in passing.
- */
- HDassert(entry_ptr->type);
-
- was_dirty = entry_ptr->is_dirty; /* needed later for logging */
-
- /* We will set flush_in_progress back to FALSE at the end if the
+ * We will set flush_in_progress back to FALSE at the end if the
* entry still exists at that point.
*/
entry_ptr->flush_in_progress = TRUE;
entry_ptr->flush_marker = FALSE;
+ /* Preserve current dirty state for later */
+ was_dirty = entry_ptr->is_dirty;
+
/* The entry is dirty, and we are doing a flush, a flush destroy or have
* been requested to generate an image. In those cases, serialize the
* entry.
@@ -8277,10 +8270,6 @@ H5C__assert_flush_dep_nocycle(const H5C_cache_entry_t * entry,
* are about to delete the entry from the cache (i.e. on a
* flush destroy).
*
- * Note: This routine is very similar to H5C__serialize_single_entry
- * and changes to one should probably be reflected in the other.
- * Ideally, one should be eliminated.
- *
* Return: Non-negative on success/Negative on failure
*
* Programmer: Mohamad Chaarawi
@@ -8288,7 +8277,7 @@ H5C__assert_flush_dep_nocycle(const H5C_cache_entry_t * entry,
*
*-------------------------------------------------------------------------
*/
-static herr_t
+herr_t
H5C__generate_image(H5F_t *f, H5C_t *cache_ptr, H5C_cache_entry_t *entry_ptr,
hid_t dxpl_id)
{
@@ -8298,10 +8287,18 @@ H5C__generate_image(H5F_t *f, H5C_t *cache_ptr, H5C_cache_entry_t *entry_ptr,
unsigned serialize_flags = H5C__SERIALIZE_NO_FLAGS_SET;
herr_t ret_value = SUCCEED;
- FUNC_ENTER_STATIC
+ FUNC_ENTER_PACKAGE
/* Sanity check */
+ HDassert(f);
+ HDassert(cache_ptr);
+ HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
+ HDassert(entry_ptr);
+ HDassert(entry_ptr->magic == H5C__H5C_CACHE_ENTRY_T_MAGIC);
HDassert(!entry_ptr->image_up_to_date);
+ HDassert(entry_ptr->is_dirty);
+ HDassert(!entry_ptr->is_protected);
+ HDassert(entry_ptr->type);
/* make note of the entry's current address */
old_addr = entry_ptr->addr;
@@ -8352,6 +8349,9 @@ H5C__generate_image(H5F_t *f, H5C_t *cache_ptr, H5C_cache_entry_t *entry_ptr,
/* If required, resize the buffer and update the entry and the cache
* data structures */
if(serialize_flags & H5C__SERIALIZE_RESIZED_FLAG) {
+ /* Sanity check */
+ HDassert(new_len > 0);
+
/* Allocate a new image buffer */
if(NULL == (entry_ptr->image_ptr = H5MM_realloc(entry_ptr->image_ptr, new_len + H5C_IMAGE_EXTRA_SPACE)))
HGOTO_ERROR(H5E_CACHE, H5E_CANTALLOC, FAIL, "memory allocation failed for on disk image buffer")
@@ -8417,6 +8417,13 @@ H5C__generate_image(H5F_t *f, H5C_t *cache_ptr, H5C_cache_entry_t *entry_ptr,
#endif /* H5C_DO_MEMORY_SANITY_CHECKS */
entry_ptr->image_up_to_date = TRUE;
+ /* Propagate the fact that the entry is serialized up the
+ * flush dependency chain if appropriate. Since the image must
+ * have been out of date for this function to have been called
+ * (see assertion on entry), no need to check that -- only check
+ * for flush dependency parents.
+ */
+ HDassert(entry_ptr->flush_dep_nunser_children == 0);
if(entry_ptr->flush_dep_nparents > 0)
if(H5C__mark_flush_dep_serialized(entry_ptr) < 0)
HGOTO_ERROR(H5E_CACHE, H5E_CANTNOTIFY, FAIL, "Can't propagate serialization status to fd parents")
diff --git a/src/H5Cimage.c b/src/H5Cimage.c
index dec8283..1845d7b 100644
--- a/src/H5Cimage.c
+++ b/src/H5Cimage.c
@@ -123,8 +123,7 @@ static herr_t H5C__serialize_cache(H5F_t *f, hid_t dxpl_id);
static herr_t H5C__serialize_ring(H5F_t *f, hid_t dxpl_id,
H5C_ring_t ring);
static herr_t H5C__serialize_single_entry(H5F_t *f, hid_t dxpl_id,
- H5C_t *cache_ptr, H5C_cache_entry_t *entry_ptr,
- hbool_t *restart_list_scan_ptr);
+ H5C_t *cache_ptr, H5C_cache_entry_t *entry_ptr);
static herr_t H5C__write_cache_image_superblock_msg(H5F_t *f, hid_t dxpl_id,
hbool_t create);
static herr_t H5C__read_cache_image(H5F_t * f, hid_t dxpl_id, const H5C_t *cache_ptr);
@@ -3565,7 +3564,6 @@ static herr_t
H5C__serialize_ring(H5F_t *f, hid_t dxpl_id, H5C_ring_t ring)
{
hbool_t done = FALSE;
- hbool_t restart_list_scan = FALSE;
H5C_t * cache_ptr;
H5C_cache_entry_t * entry_ptr;
herr_t ret_value = SUCCEED;
@@ -3620,7 +3618,7 @@ H5C__serialize_ring(H5F_t *f, hid_t dxpl_id, H5C_ring_t ring)
* marked out of date if appropriate when the child is serialized.
*
* However, this is a major issue for a flush, as were this to happen
- * in a flush, it would violate the invarient that the flush dependency
+ * in a flush, it would violate the invariant that the flush dependency
* feature is intended to enforce. As the metadata cache has no
* control over the behavior of cache clients, it has no way of
* preventing this behaviour. However, it should detect it if at all
@@ -3659,6 +3657,14 @@ H5C__serialize_ring(H5F_t *f, hid_t dxpl_id, H5C_ring_t ring)
* tree does not change beyond the removal of a leaf.
*/
while(!done) {
+ /* Reset the counters so that we can detect insertions, loads,
+ * moves, and flush dependency height changes caused by the pre_serialize
+ * and serialize callbacks.
+ */
+ cache_ptr->entries_loaded_counter = 0;
+ cache_ptr->entries_inserted_counter = 0;
+ cache_ptr->entries_relocated_counter = 0;
+
done = TRUE; /* set to FALSE if any activity in inner loop */
entry_ptr = cache_ptr->il_head;
while(entry_ptr != NULL) {
@@ -3686,33 +3692,51 @@ H5C__serialize_ring(H5F_t *f, hid_t dxpl_id, H5C_ring_t ring)
HDassert(entry_ptr->serialization_count == 0);
/* Serialize the entry */
- if(H5C__serialize_single_entry(f, dxpl_id, cache_ptr, entry_ptr, &restart_list_scan) < 0)
+ if(H5C__serialize_single_entry(f, dxpl_id, cache_ptr, entry_ptr) < 0)
HGOTO_ERROR(H5E_CACHE, H5E_CANTSERIALIZE, FAIL, "entry serialization failed")
HDassert(entry_ptr->flush_dep_nunser_children == 0);
HDassert(entry_ptr->serialization_count == 0);
#ifndef NDEBUG
+ /* Increment serialization counter (to detect multiple serializations) */
entry_ptr->serialization_count++;
#endif /* NDEBUG */
} /* end if */
+ } /* end if */
+
+ /* Check for the cache being perturbed during the entry serialize */
+ if((cache_ptr->entries_loaded_counter > 0) ||
+ (cache_ptr->entries_inserted_counter > 0) ||
+ (cache_ptr->entries_relocated_counter > 0)) {
#if H5C_COLLECT_CACHE_STATS
- if(restart_list_scan)
- H5C__UPDATE_STATS_FOR_INDEX_SCAN_RESTART(cache_ptr);
+ H5C__UPDATE_STATS_FOR_INDEX_SCAN_RESTART(cache_ptr);
#endif /* H5C_COLLECT_CACHE_STATS */
- } /* end if */
- if(restart_list_scan) {
- restart_list_scan = FALSE;
+ /* Reset the counters */
+ cache_ptr->entries_loaded_counter = 0;
+ cache_ptr->entries_inserted_counter = 0;
+ cache_ptr->entries_relocated_counter = 0;
+
+ /* Restart scan */
entry_ptr = cache_ptr->il_head;
} /* end if */
else
+ /* Advance to next entry */
entry_ptr = entry_ptr->il_next;
} /* while ( entry_ptr != NULL ) */
} /* while ( ! done ) */
+ /* Reset the counters so that we can detect insertions, loads,
+ * moves, and flush dependency height changes caused by the pre_serialize
+ * and serialize callbacks.
+ */
+ cache_ptr->entries_loaded_counter = 0;
+ cache_ptr->entries_inserted_counter = 0;
+ cache_ptr->entries_relocated_counter = 0;
+
/* At this point, all entries not marked "flush me last" and in
* the current ring or outside it should be serialized and have up
* to date images. Scan the index list again to serialize the
@@ -3733,14 +3757,19 @@ H5C__serialize_ring(H5F_t *f, hid_t dxpl_id, H5C_ring_t ring)
HDassert(entry_ptr->flush_dep_nunser_children == 0);
/* Serialize the entry */
- if(H5C__serialize_single_entry(f, dxpl_id, cache_ptr, entry_ptr, &restart_list_scan) < 0)
+ if(H5C__serialize_single_entry(f, dxpl_id, cache_ptr, entry_ptr) < 0)
HGOTO_ERROR(H5E_CACHE, H5E_CANTSERIALIZE, FAIL, "entry serialization failed")
- else if(restart_list_scan)
+
+ /* Check for the cache changing */
+ if((cache_ptr->entries_loaded_counter > 0) ||
+ (cache_ptr->entries_inserted_counter > 0) ||
+ (cache_ptr->entries_relocated_counter > 0))
HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "flush_me_last entry serialization triggered restart")
HDassert(entry_ptr->flush_dep_nunser_children == 0);
HDassert(entry_ptr->serialization_count == 0);
#ifndef NDEBUG
+ /* Increment serialization counter (to detect multiple serializations) */
entry_ptr->serialization_count++;
#endif /* NDEBUG */
} /* end if */
@@ -3767,10 +3796,6 @@ done:
* Purpose: Serialize the cache entry pointed to by the entry_ptr
* parameter.
*
- * Note: This routine is very similar to H5C__generate_image
- * and changes to one should probably be reflected in the other.
- * Ideally, one should be eliminated.
- *
* Return: Non-negative on success/Negative on failure
*
* Programmer: John Mainzer, 7/24/15
@@ -3779,12 +3804,8 @@ done:
*/
static herr_t
H5C__serialize_single_entry(H5F_t *f, hid_t dxpl_id, H5C_t *cache_ptr,
- H5C_cache_entry_t *entry_ptr, hbool_t *restart_list_scan_ptr)
+ H5C_cache_entry_t *entry_ptr)
{
- unsigned serialize_flags = H5C__SERIALIZE_NO_FLAGS_SET;
- haddr_t new_addr = HADDR_UNDEF;
- haddr_t old_addr = HADDR_UNDEF;
- size_t new_len = 0;
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_STATIC
@@ -3801,8 +3822,6 @@ H5C__serialize_single_entry(H5F_t *f, hid_t dxpl_id, H5C_t *cache_ptr,
HDassert(!entry_ptr->is_protected);
HDassert(!entry_ptr->flush_in_progress);
HDassert(entry_ptr->type);
- HDassert(restart_list_scan_ptr);
- HDassert(*restart_list_scan_ptr == FALSE);
/* Set entry_ptr->flush_in_progress to TRUE so the the target entry
* will not be evicted out from under us. Must set it back to FALSE
@@ -3820,166 +3839,13 @@ H5C__serialize_single_entry(H5F_t *f, hid_t dxpl_id, H5C_t *cache_ptr,
#endif /* H5C_DO_MEMORY_SANITY_CHECKS */
} /* end if */
- /* Serialize the entry. Note that the entry need not be dirty. */
-
- /* Reset cache_ptr->slist_changed so we can detect slist
- * modifications in the pre_serialize call.
- */
- cache_ptr->slist_changed = FALSE;
-
- /* Make note of the entry's current address */
- old_addr = entry_ptr->addr;
-
- /* Reset the counters so that we can detect insertions, loads,
- * moves, and flush dependency height changes caused by the pre_serialize
- * and serialize calls.
- */
- cache_ptr->entries_loaded_counter = 0;
- cache_ptr->entries_inserted_counter = 0;
- cache_ptr->entries_relocated_counter = 0;
-
- /* Call client's pre-serialize callback, if there's one */
- if(entry_ptr->type->pre_serialize &&
- (entry_ptr->type->pre_serialize)(f, dxpl_id, (void *)entry_ptr, entry_ptr->addr, entry_ptr->size, &new_addr, &new_len, &serialize_flags) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTFLUSH, FAIL, "unable to pre-serialize entry")
-
- /* Check for any flags set in the pre-serialize callback */
- if(serialize_flags != H5C__SERIALIZE_NO_FLAGS_SET) {
-
- /* Check for unexpected flags from serialize callback */
- if(serialize_flags & ~(H5C__SERIALIZE_RESIZED_FLAG | H5C__SERIALIZE_MOVED_FLAG))
- HGOTO_ERROR(H5E_CACHE, H5E_CANTFLUSH, FAIL, "unknown serialize flag(s)")
-
-#ifdef H5_HAVE_PARALLEL
- /* In the parallel case, resizes and moves in the serialize
- * operation can cause problems. If they occur, scream and die.
- *
- * At present, in the parallel case, the aux_ptr will only be
- * set if there is more than one process. Thus we can use this
- * to detect the parallel case.
- *
- * This works for now, but if we start using the aux_ptr for
- * other purposes, we will have to change this test accordingly.
- *
- * NB: While this test detects entryies that attempt
- * to resize or move themselves during a flush
- * in the parallel case, it will not detect an
- * entry that dirties, resizes, and/or moves
- * other entries during its flush.
- *
- * From what Quincey tells me, this test is
- * sufficient for now, as any flush routine that
- * does the latter will also do the former.
- *
- * If that ceases to be the case, further
- * tests will be necessary.
- */
- if(cache_ptr->aux_ptr != NULL)
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "resize/move in serialize occured in parallel case.")
-#endif /* H5_HAVE_PARALLEL */
-
- /* Resize the buffer if required */
- if(serialize_flags & H5C__SERIALIZE_RESIZED_FLAG) {
- /* Sanity check */
- HDassert(new_len > 0);
-
- /* Allocate a new image buffer */
- if(NULL == (entry_ptr->image_ptr = H5MM_realloc(entry_ptr->image_ptr, new_len + H5C_IMAGE_EXTRA_SPACE)))
- HGOTO_ERROR(H5E_CACHE, H5E_CANTALLOC, FAIL, "memory allocation failed for on disk image buffer")
-#if H5C_DO_MEMORY_SANITY_CHECKS
- HDmemcpy(((uint8_t *)entry_ptr->image_ptr) + new_len, H5C_IMAGE_SANITY_VALUE, H5C_IMAGE_EXTRA_SPACE);
-#endif /* H5C_DO_MEMORY_SANITY_CHECKS */
-
- /* Update the entry and the cache data structures for a resize. */
- H5C__UPDATE_STATS_FOR_ENTRY_SIZE_CHANGE(cache_ptr, entry_ptr, new_len)
-
- /* Update the hash table for the size change */
- H5C__UPDATE_INDEX_FOR_SIZE_CHANGE(cache_ptr, entry_ptr->size, new_len, entry_ptr, !(entry_ptr->is_dirty));
-
- /* The entry can't be protected since we are
- * in the process of serializing the cache. Thus we must
- * update the replacement policy data structures for the
- * size change. The macro deals with the pinned case.
- */
- H5C__UPDATE_RP_FOR_SIZE_CHANGE(cache_ptr, entry_ptr, new_len);
-
- /* It should be in the skip list, update the skip list for the
- * size change.
- */
- HDassert(entry_ptr->is_dirty);
- HDassert(entry_ptr->in_slist);
- H5C__UPDATE_SLIST_FOR_SIZE_CHANGE(cache_ptr, entry_ptr->size, new_len)
-
- /* Finally, update the entry for its new size */
- entry_ptr->size = new_len;
- } /* end if */
-
- /* If required, update the entry and the cache data structures
- * for a move
- */
- if(serialize_flags & H5C__SERIALIZE_MOVED_FLAG) {
- /* Since the entry has moved, it is probably no longer in
- * the same place in its list. Thus at a minimum, we must set
- * *restart_list_scan_ptr to TRUE.
- */
- *restart_list_scan_ptr = TRUE;
-
- /* Update stats and the entries relocated counter */
- H5C__UPDATE_STATS_FOR_MOVE(cache_ptr, entry_ptr)
-
- /* We must update cache data structures for the change in address */
- if(entry_ptr->addr == old_addr) {
- /* Delete the entry from the hash table and the slist */
- H5C__DELETE_FROM_INDEX(cache_ptr, entry_ptr, FAIL)
- H5C__REMOVE_ENTRY_FROM_SLIST(cache_ptr, entry_ptr, FALSE)
-
- /* Update the entry for its new address */
- entry_ptr->addr = new_addr;
-
- /* And then reinsert in the index and slist (if appropriate) */
- H5C__INSERT_IN_INDEX(cache_ptr, entry_ptr, FAIL)
- H5C__INSERT_ENTRY_IN_SLIST(cache_ptr, entry_ptr, FAIL)
- } /* end if */
- else /* Move is already done for us -- just do sanity checks */
- HDassert(entry_ptr->addr == new_addr);
- } /* end if */
- } /* end if ( serialize_flags != H5C__SERIALIZE_NO_FLAGS_SET ) */
-
- /* Reset cache_ptr->slist_changed so we can detect slist
- * modifications in the serialize call.
- */
- cache_ptr->slist_changed = FALSE;
-
- /* Serialize object into buffer */
- if(entry_ptr->type->serialize(f, entry_ptr->image_ptr, entry_ptr->size, (void *)entry_ptr) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTFLUSH, FAIL, "unable to serialize entry")
-#if H5C_DO_MEMORY_SANITY_CHECKS
- HDassert(0 == HDmemcmp(((uint8_t *)entry_ptr->image_ptr) + image_len, H5C_IMAGE_SANITY_VALUE, H5C_IMAGE_EXTRA_SPACE));
-#endif /* H5C_DO_MEMORY_SANITY_CHECKS */
- entry_ptr->image_up_to_date = TRUE;
-
- /* Propagate the fact that the entry is serialized up the
- * flush dependency chain if appropriate. Since the image must
- * have been out of date for this function to have been called
- * (see assertion on entry), no need to check that -- only check
- * for flush dependency parents.
- */
- HDassert(entry_ptr->flush_dep_nunser_children == 0);
- if(entry_ptr->flush_dep_nparents > 0)
- if(H5C__mark_flush_dep_serialized(entry_ptr) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTNOTIFY, FAIL, "Can't propagate flush dep serialized flag")
+ /* Generate image for entry */
+ if(H5C__generate_image(f, cache_ptr, entry_ptr, dxpl_id) < 0)
+ HGOTO_ERROR(H5E_CACHE, H5E_CANTSERIALIZE, FAIL, "Can't generate image for cache entry")
/* Reset the flush_in progress flag */
entry_ptr->flush_in_progress = FALSE;
- /* Set *restart_fd_scan_ptr to TRUE if appropriate, and if we
- * haven't already done so.
- */
- if(!(*restart_list_scan_ptr))
- if((cache_ptr->entries_loaded_counter > 0) || (cache_ptr->entries_inserted_counter > 0) ||
- (cache_ptr->entries_relocated_counter > 0))
- *restart_list_scan_ptr = TRUE;
-
done:
HDassert((ret_value != SUCCEED) || (!entry_ptr->flush_in_progress));
HDassert((ret_value != SUCCEED) || (entry_ptr->image_up_to_date));
diff --git a/src/H5Cpkg.h b/src/H5Cpkg.h
index 1656a32..9a9e038 100644
--- a/src/H5Cpkg.h
+++ b/src/H5Cpkg.h
@@ -4904,6 +4904,8 @@ H5_DLL herr_t H5C__mark_flush_dep_unserialized(H5C_cache_entry_t * entry_ptr);
H5_DLL herr_t H5C__make_space_in_cache(H5F_t * f, hid_t dxpl_id,
size_t space_needed, hbool_t write_permitted);
H5_DLL herr_t H5C__flush_marked_entries(H5F_t * f, hid_t dxpl_id);
+H5_DLL herr_t H5C__generate_image(H5F_t *f, H5C_t *cache_ptr,
+ H5C_cache_entry_t *entry_ptr, hid_t dxpl_id);
H5_DLL herr_t H5C__iter_tagged_entries(H5C_t *cache, haddr_t tag, hbool_t match_global,
H5C_tag_iter_cb_t cb, void *cb_ctx);