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-rw-r--r--MANIFEST12
-rw-r--r--release_docs/RELEASE.txt5
-rw-r--r--tools/h5diff/h5diff_common.c118
-rw-r--r--tools/h5diff/h5diff_main.c20
-rw-r--r--tools/h5diff/testfiles/h5diff_10.txt99
-rw-r--r--tools/h5diff/testfiles/h5diff_100.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_101.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_102.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_11.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_12.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_13.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_14.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_15.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_16_1.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_16_2.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_16_3.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_17.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_171.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_172.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_18.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_19.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_20.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_200.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_201.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_202.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_203.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_204.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_205.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_206.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_207.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_21.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_22.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_23.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_24.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_25.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_26.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_27.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_28.txt1
-rwxr-xr-xtools/h5diff/testfiles/h5diff_300.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_400.txt20
-rw-r--r--tools/h5diff/testfiles/h5diff_401.txt5
-rw-r--r--tools/h5diff/testfiles/h5diff_402.txt5
-rw-r--r--tools/h5diff/testfiles/h5diff_403.txt5
-rw-r--r--tools/h5diff/testfiles/h5diff_404.txt16
-rw-r--r--tools/h5diff/testfiles/h5diff_405.txt5
-rw-r--r--tools/h5diff/testfiles/h5diff_406.txt5
-rw-r--r--tools/h5diff/testfiles/h5diff_407.txt5
-rw-r--r--tools/h5diff/testfiles/h5diff_408.txt5
-rw-r--r--tools/h5diff/testfiles/h5diff_409.txt5
-rw-r--r--tools/h5diff/testfiles/h5diff_410.txt25
-rw-r--r--tools/h5diff/testfiles/h5diff_411.txt5
-rw-r--r--tools/h5diff/testfiles/h5diff_412.txt5
-rw-r--r--tools/h5diff/testfiles/h5diff_413.txt5
-rw-r--r--tools/h5diff/testfiles/h5diff_414.txt3
-rw-r--r--tools/h5diff/testfiles/h5diff_415.txt3
-rw-r--r--tools/h5diff/testfiles/h5diff_416.txt3
-rw-r--r--tools/h5diff/testfiles/h5diff_417.txt9
-rw-r--r--tools/h5diff/testfiles/h5diff_418.txt9
-rw-r--r--tools/h5diff/testfiles/h5diff_419.txt5
-rw-r--r--tools/h5diff/testfiles/h5diff_420.txt5
-rw-r--r--tools/h5diff/testfiles/h5diff_421.txt5
-rw-r--r--tools/h5diff/testfiles/h5diff_422.txt5
-rw-r--r--tools/h5diff/testfiles/h5diff_423.txt5
-rw-r--r--tools/h5diff/testfiles/h5diff_424.txt5
-rw-r--r--tools/h5diff/testfiles/h5diff_425.txt5
-rw-r--r--tools/h5diff/testfiles/h5diff_450.txt35
-rw-r--r--tools/h5diff/testfiles/h5diff_451.txt28
-rw-r--r--tools/h5diff/testfiles/h5diff_452.txt2
-rw-r--r--tools/h5diff/testfiles/h5diff_453.txt47
-rw-r--r--tools/h5diff/testfiles/h5diff_454.txt2
-rw-r--r--tools/h5diff/testfiles/h5diff_455.txt2
-rw-r--r--tools/h5diff/testfiles/h5diff_456.txt32
-rw-r--r--tools/h5diff/testfiles/h5diff_457.txt2
-rw-r--r--tools/h5diff/testfiles/h5diff_458.txt2
-rw-r--r--tools/h5diff/testfiles/h5diff_459.txt2
-rw-r--r--tools/h5diff/testfiles/h5diff_50.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_51.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_52.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_53.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_54.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_55.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_56.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_57.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_58.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_600.txt99
-rw-r--r--tools/h5diff/testfiles/h5diff_603.txt99
-rw-r--r--tools/h5diff/testfiles/h5diff_604.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_605.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_606.txt99
-rw-r--r--tools/h5diff/testfiles/h5diff_607.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_608.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_609.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_610.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_612.txt99
-rw-r--r--tools/h5diff/testfiles/h5diff_613.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_614.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_615.txt99
-rw-r--r--tools/h5diff/testfiles/h5diff_616.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_617.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_618.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_619.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_621.txt99
-rw-r--r--tools/h5diff/testfiles/h5diff_622.txt99
-rw-r--r--tools/h5diff/testfiles/h5diff_623.txt99
-rw-r--r--tools/h5diff/testfiles/h5diff_624.txt99
-rw-r--r--tools/h5diff/testfiles/h5diff_625.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_626.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_627.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_628.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_629.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_70.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_80.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_90.txt1
-rw-r--r--tools/h5diff/testfiles/h5diff_danglelinks1.h5bin0 -> 5012 bytes
-rw-r--r--tools/h5diff/testfiles/h5diff_danglelinks2.h5bin0 -> 5012 bytes
-rwxr-xr-xtools/h5diff/testh5diff.sh188
-rw-r--r--tools/lib/h5diff.c1005
-rw-r--r--tools/lib/h5diff.h3
118 files changed, 1672 insertions, 1064 deletions
diff --git a/MANIFEST b/MANIFEST
index ee2ba15..1071f0a 100644
--- a/MANIFEST
+++ b/MANIFEST
@@ -1548,6 +1548,16 @@
./tools/h5diff/testfiles/h5diff_423.txt
./tools/h5diff/testfiles/h5diff_424.txt
./tools/h5diff/testfiles/h5diff_425.txt
+./tools/h5diff/testfiles/h5diff_450.txt
+./tools/h5diff/testfiles/h5diff_451.txt
+./tools/h5diff/testfiles/h5diff_452.txt
+./tools/h5diff/testfiles/h5diff_453.txt
+./tools/h5diff/testfiles/h5diff_454.txt
+./tools/h5diff/testfiles/h5diff_455.txt
+./tools/h5diff/testfiles/h5diff_456.txt
+./tools/h5diff/testfiles/h5diff_457.txt
+./tools/h5diff/testfiles/h5diff_458.txt
+./tools/h5diff/testfiles/h5diff_459.txt
./tools/h5diff/testfiles/h5diff_attr1.h5
@@ -1568,6 +1578,8 @@
./tools/h5diff/testfiles/h5diff_extlink_trg.h5
./tools/h5diff/testfiles/h5diff_linked_softlink.h5
./tools/h5diff/testfiles/h5diff_softlinks.h5
+./tools/h5diff/testfiles/h5diff_danglelinks1.h5
+./tools/h5diff/testfiles/h5diff_danglelinks2.h5
diff --git a/release_docs/RELEASE.txt b/release_docs/RELEASE.txt
index 93a6e68..c845d6c 100644
--- a/release_docs/RELEASE.txt
+++ b/release_docs/RELEASE.txt
@@ -142,8 +142,9 @@ New Features
Tools:
------
- - h5diff: Add new flag -l (--link-follow),for comparing through links
- (soft and external links along with hard link).
+ - h5diff: Add new flag --no-dangling-links. (refer to --help for details)
+ (JKM - 2010/02/10)
+ - h5diff: Add new flag --follow-links. (refer to --help for details)
(JKM - 2010/01/25)
- h5diff: fix for displaying garbage value on LE machine for BE data.
(JKM - 2009/11/20)
diff --git a/tools/h5diff/h5diff_common.c b/tools/h5diff/h5diff_common.c
index 9e3b86e..75e1774 100644
--- a/tools/h5diff/h5diff_common.c
+++ b/tools/h5diff/h5diff_common.c
@@ -31,7 +31,7 @@ const char *progname = "h5diff";
* Command-line options: The user can specify short or long-named
* parameters.
*/
-static const char *s_opts = "hVrvqn:d:p:Ncl";
+static const char *s_opts = "hVrvqn:d:p:Nc";
static struct long_options l_opts[] = {
{ "help", no_arg, 'h' },
{ "version", no_arg, 'V' },
@@ -44,7 +44,8 @@ static struct long_options l_opts[] = {
{ "nan", no_arg, 'N' },
{ "compare", no_arg, 'c' },
{ "use-system-epsilon", no_arg, 'e' },
- { "link-follow", no_arg, 'l' },
+ { "follow-links", no_arg, 'l' },
+ { "no-dangling-links", no_arg, 'x' },
{ NULL, 0, '\0' }
};
@@ -102,7 +103,10 @@ void parse_command_line(int argc,
options->m_report = 1;
break;
case 'l':
- options->linkfollow = 1;
+ options->follow_links = 1;
+ break;
+ case 'x':
+ options->no_dangle_links = 1;
break;
case 'd':
options->d=1;
@@ -356,33 +360,68 @@ void usage(void)
printf(" file2 File name of the second HDF5 file\n");
printf(" [obj1] Name of an HDF5 object, in absolute path\n");
printf(" [obj2] Name of an HDF5 object, in absolute path\n");
-
+ printf("\n");
printf(" OPTIONS\n");
-
- printf(" -h, --help Print a usage message and exit\n");
- printf(" -V, --version Print version number and exit\n");
- printf(" -r, --report Report mode. Print differences\n");
- printf(" -v, --verbose Verbose mode. Print differences, list of objects\n");
- printf(" -q, --quiet Quiet mode. Do not do output\n");
- printf(" -l, --link-follow Follow link(s)\n");
+ printf(" -h, --help Print a usage message and exit.\n");
+ printf(" -V, --version Print version number and exit.\n");
+ printf(" -r, --report Report mode. Print differences.\n");
+ printf(" -v, --verbose Verbose mode. Print differences, list of objects.\n");
+ printf(" -q, --quiet Quiet mode. Do not produce output.\n");
+ printf(" --follow-links Follow symbolic links (soft links and external links)\n");
+ printf(" and compare the links' target objects.\n");
+ printf(" If symbolic link(s) with the same name exist in the\n");
+ printf(" files being compared, then determine whether the \n");
+ printf(" target of each link is an existing object (dataset,\n");
+ printf(" group, or named datatype) or the link is a dangling\n");
+ printf(" link (a soft or external link pointing to a target\n");
+ printf(" object that does not yet exist).\n");
+ printf(" - If both symbolic links are dangling links, they\n");
+ printf(" are treated as being the same; by default, h5diff\n");
+ printf(" returns an exit code of 0. If, however, \n");
+ printf(" --no-dangling-links is used with --follow-links, \n");
+ printf(" this situation is treated as an error and h5diff \n");
+ printf(" returns an exit code of 2.\n");
+ printf(" - If only one of the two links is a dangling link,\n");
+ printf(" they are treated as being different and h5diff \n");
+ printf(" returns an exit code of 1. If, however, \n");
+ printf(" --no-dangling-links is used with --follow-links, \n");
+ printf(" this situation is treated as an error and h5diff \n");
+ printf(" returns an exit code of 2.\n");
+ printf(" - If both symbolic links point to existing objects,\n");
+ printf(" h5diff compares the two objects.\n");
+ printf(" If any symbolic link specified in the call to h5diff\n");
+ printf(" does not exist, h5diff treats it as an error and\n");
+ printf(" returns an exit code of 2.\n");
+ printf(" --no-dangling-links Must be used with --follow-links option;\n");
+ printf(" otherwise, h5diff shows error message and returns\n");
+ printf(" an exit code of 2.\n");
+ printf(" Check for any symbolic links (soft links or external\n");
+ printf(" links) that do not resolve to an existing object\n");
+ printf(" (dataset, group, or named datatype). If any\n");
+ printf(" dangling link is found, this situation is treated as\n");
+ printf(" an error and h5diff returns an exit code of 2.\n");
printf(" -c, --compare List objects that are not comparable\n");
printf(" -N, --nan Avoid NaNs detection\n");
- printf(" -n C, --count=C Print differences up to C number, C is a positive integer.\n");
-
- printf(" -d D, --delta=D Print difference if (|a-b| > D), D is a positive number.\n");
- printf(" -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive number.\n");
+ printf(" -n C, --count=C Print differences up to C number, C is a positive\n");
+ printf(" integer.\n");
+ printf(" -d D, --delta=D Print difference if (|a-b| > D), D is a positive\n");
+ printf(" number.\n");
+ printf(" -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive\n");
+ printf(" number.\n");
printf(" --use-system-epsilon Print difference if (|a-b| > EPSILON),\n");
- printf(" where EPSILON (FLT_EPSILON or FLT_EPSILON) is the system epsilon value. \n");
- printf(" If the system epsilon is not defined, use the value below:\n");
+ printf(" where EPSILON (FLT_EPSILON or FLT_EPSILON) is the\n");
+ printf(" system epsilon value. \n");
+ printf(" If the system epsilon is not defined, use the value\n");
+ printf(" below:\n");
printf(" FLT_EPSILON = 1.19209E-07 for float\n");
printf(" DBL_EPSILON = 2.22045E-16 for double\n");
-
- printf(" -d, -p, and --use-system-epsilon options are used for comparing floating point values.\n");
- printf(" By default, strict equality is used. Use -p or -d to set specific tolerance.\n");
+ printf(" -d, -p, and --use-system-epsilon options are used for\n");
+ printf(" comparing floating point values.\n");
+ printf(" By default, strict equality is used. Use -p or -d to\n");
+ printf(" set specific tolerance.\n");
printf("\n");
printf(" Modes of output:\n");
- printf("\n");
printf(" Default mode: print the number of differences found and where they occured\n");
printf(" -r Report mode: print the above plus the differences\n");
printf(" -v Verbose mode: print the above plus a list of objects and warnings\n");
@@ -391,46 +430,35 @@ void usage(void)
printf("\n");
printf(" Compare criteria\n");
- printf("\n");
- printf(" If no objects [obj1[obj2]] are specified, h5diff only compares objects\n");
- printf(" with the same absolute path in both files\n");
+ printf(" If no objects [obj1[obj2]] are specified, h5diff only compares objects\n");
+ printf(" with the same absolute path in both files\n");
printf("\n");
printf(" The compare criteria is:\n");
- printf(" 1) datasets: numerical array differences 2) groups: name string difference\n");
- printf(" 3) datatypes: the return value of H5Tequal 4) links: name string difference\n");
- printf(" of the linked value\n");
-
+ printf(" 1) datasets: numerical array differences\n");
+ printf(" 2) groups: name string difference\n");
+ printf(" 3) datatypes: the return value of H5Tequal\n");
+ printf(" 4) links: name string difference of the linked value as default\n");
+ printf(" (refer to --follow-links option).\n");
printf("\n");
-
- printf(" Return exit code:\n");
+ printf(" Exit code:\n");
+ printf(" 0 if no differences, 1 if differences found, 2 if error\n");
printf("\n");
- printf(" 1 if differences found, 0 if no differences, 2 if error\n");
-
- printf("\n");
-
printf(" Examples of use:\n");
- printf("\n");
printf(" 1) h5diff file1 file2 /g1/dset1 /g1/dset2\n");
- printf("\n");
printf(" Compares object '/g1/dset1' in file1 with '/g1/dset2' in file2\n");
printf("\n");
printf(" 2) h5diff file1 file2 /g1/dset1\n");
- printf("\n");
printf(" Compares object '/g1/dset1' in both files\n");
printf("\n");
printf(" 3) h5diff file1 file2\n");
- printf("\n");
printf(" Compares all objects in both files\n");
printf("\n");
- printf(" Note) file1 and file2 can be the same file. Use\n");
- printf("\n");
- printf(" h5diff file1 file1 /g1/dset1 /g1/dset2\n");
- printf("\n");
- printf(" to compare '/g1/dset1' and '/g1/dset2' in the same file\n");
+ printf(" Notes:\n");
+ printf(" file1 and file2 can be the same file.\n");
+ printf(" Use h5diff file1 file1 /g1/dset1 /g1/dset2 to compare\n");
+ printf(" '/g1/dset1' and '/g1/dset2' in the same file\n");
printf("\n");
-
-
}
diff --git a/tools/h5diff/h5diff_main.c b/tools/h5diff/h5diff_main.c
index 1cb8f2f..6f33bb0 100644
--- a/tools/h5diff/h5diff_main.c
+++ b/tools/h5diff/h5diff_main.c
@@ -88,6 +88,25 @@ int main(int argc, const char *argv[])
parse_command_line(argc, argv, &fname1, &fname2, &objname1, &objname2, &options);
+ /*-------------------------------------------------------------------------
+ * check invalid combination of options
+ *-----------------------------------------------------------------------*/
+ /* no -q(quiet) with -v (verbose) or -r (report) */
+ if(options.m_quiet && (options.m_verbose || options.m_report))
+ {
+ parallel_print("Error: -q (quiet mode) cannot be added to verbose or report modes\n");
+ options.err_stat=1;
+ goto out;
+ }
+
+ /* only allow --no-dangling-links along with --follow-links */
+ if(options.no_dangle_links && !options.follow_links)
+ {
+ parallel_print("Error: --no-dangling-links must be used along with --follow-links option.\n");
+ options.err_stat=1;
+ goto out;
+ }
+
/*-------------------------------------------------------------------------
* do the diff
*-------------------------------------------------------------------------
@@ -97,6 +116,7 @@ int main(int argc, const char *argv[])
print_info(&options);
+out:
/*-------------------------------------------------------------------------
* exit code
* 1 if differences, 0 if no differences, 2 if error
diff --git a/tools/h5diff/testfiles/h5diff_10.txt b/tools/h5diff/testfiles/h5diff_10.txt
index a6b637a..aeba845 100644
--- a/tools/h5diff/testfiles/h5diff_10.txt
+++ b/tools/h5diff/testfiles/h5diff_10.txt
@@ -3,64 +3,99 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[obj2]]
file2 File name of the second HDF5 file
[obj1] Name of an HDF5 object, in absolute path
[obj2] Name of an HDF5 object, in absolute path
+
OPTIONS
- -h, --help Print a usage message and exit
- -V, --version Print version number and exit
- -r, --report Report mode. Print differences
- -v, --verbose Verbose mode. Print differences, list of objects
- -q, --quiet Quiet mode. Do not do output
- -l, --link-follow Follow link(s)
+ -h, --help Print a usage message and exit.
+ -V, --version Print version number and exit.
+ -r, --report Report mode. Print differences.
+ -v, --verbose Verbose mode. Print differences, list of objects.
+ -q, --quiet Quiet mode. Do not produce output.
+ --follow-links Follow symbolic links (soft links and external links)
+ and compare the links' target objects.
+ If symbolic link(s) with the same name exist in the
+ files being compared, then determine whether the
+ target of each link is an existing object (dataset,
+ group, or named datatype) or the link is a dangling
+ link (a soft or external link pointing to a target
+ object that does not yet exist).
+ - If both symbolic links are dangling links, they
+ are treated as being the same; by default, h5diff
+ returns an exit code of 0. If, however,
+ --no-dangling-links is used with --follow-links,
+ this situation is treated as an error and h5diff
+ returns an exit code of 2.
+ - If only one of the two links is a dangling link,
+ they are treated as being different and h5diff
+ returns an exit code of 1. If, however,
+ --no-dangling-links is used with --follow-links,
+ this situation is treated as an error and h5diff
+ returns an exit code of 2.
+ - If both symbolic links point to existing objects,
+ h5diff compares the two objects.
+ If any symbolic link specified in the call to h5diff
+ does not exist, h5diff treats it as an error and
+ returns an exit code of 2.
+ --no-dangling-links Must be used with --follow-links option;
+ otherwise, h5diff shows error message and returns
+ an exit code of 2.
+ Check for any symbolic links (soft links or external
+ links) that do not resolve to an existing object
+ (dataset, group, or named datatype). If any
+ dangling link is found, this situation is treated as
+ an error and h5diff returns an exit code of 2.
-c, --compare List objects that are not comparable
-N, --nan Avoid NaNs detection
- -n C, --count=C Print differences up to C number, C is a positive integer.
- -d D, --delta=D Print difference if (|a-b| > D), D is a positive number.
- -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive number.
+ -n C, --count=C Print differences up to C number, C is a positive
+ integer.
+ -d D, --delta=D Print difference if (|a-b| > D), D is a positive
+ number.
+ -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive
+ number.
--use-system-epsilon Print difference if (|a-b| > EPSILON),
- where EPSILON (FLT_EPSILON or FLT_EPSILON) is the system epsilon value.
- If the system epsilon is not defined, use the value below:
+ where EPSILON (FLT_EPSILON or FLT_EPSILON) is the
+ system epsilon value.
+ If the system epsilon is not defined, use the value
+ below:
FLT_EPSILON = 1.19209E-07 for float
DBL_EPSILON = 2.22045E-16 for double
- -d, -p, and --use-system-epsilon options are used for comparing floating point values.
- By default, strict equality is used. Use -p or -d to set specific tolerance.
+ -d, -p, and --use-system-epsilon options are used for
+ comparing floating point values.
+ By default, strict equality is used. Use -p or -d to
+ set specific tolerance.
Modes of output:
-
Default mode: print the number of differences found and where they occured
-r Report mode: print the above plus the differences
-v Verbose mode: print the above plus a list of objects and warnings
-q Quiet mode: do not print output
Compare criteria
-
- If no objects [obj1[obj2]] are specified, h5diff only compares objects
- with the same absolute path in both files
+ If no objects [obj1[obj2]] are specified, h5diff only compares objects
+ with the same absolute path in both files
The compare criteria is:
- 1) datasets: numerical array differences 2) groups: name string difference
- 3) datatypes: the return value of H5Tequal 4) links: name string difference
- of the linked value
+ 1) datasets: numerical array differences
+ 2) groups: name string difference
+ 3) datatypes: the return value of H5Tequal
+ 4) links: name string difference of the linked value as default
+ (refer to --follow-links option).
- Return exit code:
-
- 1 if differences found, 0 if no differences, 2 if error
+ Exit code:
+ 0 if no differences, 1 if differences found, 2 if error
Examples of use:
-
1) h5diff file1 file2 /g1/dset1 /g1/dset2
-
Compares object '/g1/dset1' in file1 with '/g1/dset2' in file2
2) h5diff file1 file2 /g1/dset1
-
Compares object '/g1/dset1' in both files
3) h5diff file1 file2
-
Compares all objects in both files
- Note) file1 and file2 can be the same file. Use
-
- h5diff file1 file1 /g1/dset1 /g1/dset2
-
- to compare '/g1/dset1' and '/g1/dset2' in the same file
+ Notes:
+ file1 and file2 can be the same file.
+ Use h5diff file1 file1 /g1/dset1 /g1/dset2 to compare
+ '/g1/dset1' and '/g1/dset2' in the same file
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_100.txt b/tools/h5diff/testfiles/h5diff_100.txt
index 32ff7ab..363daa3 100644
--- a/tools/h5diff/testfiles/h5diff_100.txt
+++ b/tools/h5diff/testfiles/h5diff_100.txt
@@ -1035,3 +1035,4 @@ position big big difference
[ 268436478 ] 31 0 31
[ 268436479 ] 31 0 31
1024 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_101.txt b/tools/h5diff/testfiles/h5diff_101.txt
index 03875b7..1d0f38d 100644
--- a/tools/h5diff/testfiles/h5diff_101.txt
+++ b/tools/h5diff/testfiles/h5diff_101.txt
@@ -7,3 +7,4 @@ position d1 d2 difference
[ 1 1 ] 0 1e-09 1e-09
[ 2 0 ] 1e-09 0 1e-09
4 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_102.txt b/tools/h5diff/testfiles/h5diff_102.txt
index 3d91a36..30a2491 100644
--- a/tools/h5diff/testfiles/h5diff_102.txt
+++ b/tools/h5diff/testfiles/h5diff_102.txt
@@ -7,3 +7,4 @@ position fp1 fp2 difference
[ 1 1 ] 0 1e-05 1e-05
[ 2 0 ] 1e-05 0 1e-05
4 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_11.txt b/tools/h5diff/testfiles/h5diff_11.txt
index e2e33fb..c06305c 100644
--- a/tools/h5diff/testfiles/h5diff_11.txt
+++ b/tools/h5diff/testfiles/h5diff_11.txt
@@ -1,2 +1,3 @@
dataset: </g1/dset1> and </g1/dset1>
5 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_12.txt b/tools/h5diff/testfiles/h5diff_12.txt
index 6b4c747..371df79 100644
--- a/tools/h5diff/testfiles/h5diff_12.txt
+++ b/tools/h5diff/testfiles/h5diff_12.txt
@@ -1,2 +1,3 @@
dataset: </g1/dset1> and </g1/dset2>
5 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_13.txt b/tools/h5diff/testfiles/h5diff_13.txt
index 36676e9..729859b 100644
--- a/tools/h5diff/testfiles/h5diff_13.txt
+++ b/tools/h5diff/testfiles/h5diff_13.txt
@@ -8,3 +8,4 @@ position dset1 dset1 difference
[ 1 1 ] 1 1.001 0.001
[ 2 1 ] 0 1 1
5 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_14.txt b/tools/h5diff/testfiles/h5diff_14.txt
index 3fac3af..454463a 100644
--- a/tools/h5diff/testfiles/h5diff_14.txt
+++ b/tools/h5diff/testfiles/h5diff_14.txt
@@ -8,3 +8,4 @@ position dset1 dset2 difference
[ 1 1 ] 1 1.001 0.001
[ 2 1 ] 0 1 1
5 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_15.txt b/tools/h5diff/testfiles/h5diff_15.txt
index 386c6e1..7685f75 100644
--- a/tools/h5diff/testfiles/h5diff_15.txt
+++ b/tools/h5diff/testfiles/h5diff_15.txt
@@ -7,3 +7,4 @@ position dset3 dset4 difference
[ 2 0 ] 100 80 20
[ 2 1 ] 100 40 60
4 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_16_1.txt b/tools/h5diff/testfiles/h5diff_16_1.txt
index 519f695..482a42f 100644
--- a/tools/h5diff/testfiles/h5diff_16_1.txt
+++ b/tools/h5diff/testfiles/h5diff_16_1.txt
@@ -8,3 +8,4 @@ position dset5 dset6 difference relative
[ 1 1 ] 0 100 100 not comparable
[ 2 1 ] 100 50 50 0.500000
5 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_16_2.txt b/tools/h5diff/testfiles/h5diff_16_2.txt
index 233b133..34c1afb 100644
--- a/tools/h5diff/testfiles/h5diff_16_2.txt
+++ b/tools/h5diff/testfiles/h5diff_16_2.txt
@@ -8,3 +8,4 @@ position dset7 dset8 difference relative
[ 1 1 ] 0 100 100 not comparable
[ 2 1 ] 100 50 50 0.500000
5 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_16_3.txt b/tools/h5diff/testfiles/h5diff_16_3.txt
index b96c8a4..173a39b 100644
--- a/tools/h5diff/testfiles/h5diff_16_3.txt
+++ b/tools/h5diff/testfiles/h5diff_16_3.txt
@@ -8,3 +8,4 @@ position dset9 dset10 difference relative
[ 1 1 ] 0 100 100 not comparable
[ 2 1 ] 100 50 50 0.5
5 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_17.txt b/tools/h5diff/testfiles/h5diff_17.txt
index dce5ef5..5cb604d 100644
--- a/tools/h5diff/testfiles/h5diff_17.txt
+++ b/tools/h5diff/testfiles/h5diff_17.txt
@@ -51,3 +51,4 @@ position dset1 dset1 difference
[ 1 1 ] 1 1.001 0.001
[ 2 1 ] 0 1 1
5 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_171.txt b/tools/h5diff/testfiles/h5diff_171.txt
index 7ee0711..5314a79 100644
--- a/tools/h5diff/testfiles/h5diff_171.txt
+++ b/tools/h5diff/testfiles/h5diff_171.txt
@@ -1,2 +1,3 @@
dataset: </g1/fp19> and </g1/fp19>
0 differences found
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_172.txt b/tools/h5diff/testfiles/h5diff_172.txt
index e2d1b7d..0269194 100644
--- a/tools/h5diff/testfiles/h5diff_172.txt
+++ b/tools/h5diff/testfiles/h5diff_172.txt
@@ -1,2 +1,3 @@
dataset: </g1/fp20> and </g1/fp20>
0 differences found
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_18.txt b/tools/h5diff/testfiles/h5diff_18.txt
index e69de29..1255241 100644
--- a/tools/h5diff/testfiles/h5diff_18.txt
+++ b/tools/h5diff/testfiles/h5diff_18.txt
@@ -0,0 +1 @@
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_19.txt b/tools/h5diff/testfiles/h5diff_19.txt
index 9e84fe8..1155d55 100644
--- a/tools/h5diff/testfiles/h5diff_19.txt
+++ b/tools/h5diff/testfiles/h5diff_19.txt
@@ -23,3 +23,4 @@ file1 file2
group : </> and </>
0 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_20.txt b/tools/h5diff/testfiles/h5diff_20.txt
index b2fda7c..6eba851 100644
--- a/tools/h5diff/testfiles/h5diff_20.txt
+++ b/tools/h5diff/testfiles/h5diff_20.txt
@@ -3,3 +3,4 @@
Some objects are not comparable
--------------------------------
Use -c for a list of objects.
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_200.txt b/tools/h5diff/testfiles/h5diff_200.txt
index 56d723d..40e3fb6 100644
--- a/tools/h5diff/testfiles/h5diff_200.txt
+++ b/tools/h5diff/testfiles/h5diff_200.txt
@@ -2,3 +2,4 @@
Some objects are not comparable
--------------------------------
Use -c for a list of objects.
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_201.txt b/tools/h5diff/testfiles/h5diff_201.txt
index 84d6766..ede94e1 100644
--- a/tools/h5diff/testfiles/h5diff_201.txt
+++ b/tools/h5diff/testfiles/h5diff_201.txt
@@ -1 +1,2 @@
Not comparable: </g2/dset1> or </g2/dset2> is an empty dataset
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_202.txt b/tools/h5diff/testfiles/h5diff_202.txt
index fd4a191..53657d3 100644
--- a/tools/h5diff/testfiles/h5diff_202.txt
+++ b/tools/h5diff/testfiles/h5diff_202.txt
@@ -1,2 +1,3 @@
Not comparable: </g2/dset2> is of class H5T_FLOAT and </g2/dset3> is of class H5T_INTEGER
Not comparable: </g2/dset2> has sign H5T_SGN_ERROR and </g2/dset3> has sign H5T_SGN_2
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_203.txt b/tools/h5diff/testfiles/h5diff_203.txt
index 496523c..61a773a 100644
--- a/tools/h5diff/testfiles/h5diff_203.txt
+++ b/tools/h5diff/testfiles/h5diff_203.txt
@@ -1,2 +1,3 @@
Not comparable: </g2/dset3> has rank 1, dimensions [6], max dimensions [6]
and </g2/dset4> has rank 2, dimensions [3x2], max dimensions [3x2]
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_204.txt b/tools/h5diff/testfiles/h5diff_204.txt
index 098a203..e02e831 100644
--- a/tools/h5diff/testfiles/h5diff_204.txt
+++ b/tools/h5diff/testfiles/h5diff_204.txt
@@ -1,2 +1,3 @@
Not comparable: </g2/dset4> has rank 2, dimensions [3x2], max dimensions [3x2]
and </g2/dset5> has rank 2, dimensions [2x2], max dimensions [2x2]
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_205.txt b/tools/h5diff/testfiles/h5diff_205.txt
index 3e2d1f2..d72797b 100644
--- a/tools/h5diff/testfiles/h5diff_205.txt
+++ b/tools/h5diff/testfiles/h5diff_205.txt
@@ -1,3 +1,4 @@
Not comparable: </g2/dset5> has rank 2, dimensions [2x2], max dimensions [2x2]
and </g2/dset6> has rank 2, dimensions [3x2], max dimensions [3x2]
Not comparable: </g2/dset5> has sign H5T_SGN_2 and </g2/dset6> has sign H5T_SGN_NONE
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_206.txt b/tools/h5diff/testfiles/h5diff_206.txt
index 164aed9..659321f 100644
--- a/tools/h5diff/testfiles/h5diff_206.txt
+++ b/tools/h5diff/testfiles/h5diff_206.txt
@@ -1 +1,2 @@
Not comparable: </g2/dset7> has a class H5T_FLOAT and </g2/dset8> has a class H5T_INTEGER
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_207.txt b/tools/h5diff/testfiles/h5diff_207.txt
index bb8e23f..1ef3dbe 100644
--- a/tools/h5diff/testfiles/h5diff_207.txt
+++ b/tools/h5diff/testfiles/h5diff_207.txt
@@ -1,2 +1,3 @@
Not comparable: </g2/dset8> or </g2/dset9> is an empty dataset
Not comparable: </g2/dset8> has 2 members </g2/dset9> has 1 members
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_21.txt b/tools/h5diff/testfiles/h5diff_21.txt
index 5518e0c..238c8b8 100644
--- a/tools/h5diff/testfiles/h5diff_21.txt
+++ b/tools/h5diff/testfiles/h5diff_21.txt
@@ -3,3 +3,4 @@
Some objects are not comparable
--------------------------------
Use -c for a list of objects.
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_22.txt b/tools/h5diff/testfiles/h5diff_22.txt
index 0f9493b..33c3a3d 100644
--- a/tools/h5diff/testfiles/h5diff_22.txt
+++ b/tools/h5diff/testfiles/h5diff_22.txt
@@ -3,3 +3,4 @@
Some objects are not comparable
--------------------------------
Use -c for a list of objects.
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_23.txt b/tools/h5diff/testfiles/h5diff_23.txt
index 1342765..5a46ea2 100644
--- a/tools/h5diff/testfiles/h5diff_23.txt
+++ b/tools/h5diff/testfiles/h5diff_23.txt
@@ -1,2 +1,3 @@
group : </g1> and </g1>
0 differences found
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_24.txt b/tools/h5diff/testfiles/h5diff_24.txt
index cc4f0d0..fa5723a 100644
--- a/tools/h5diff/testfiles/h5diff_24.txt
+++ b/tools/h5diff/testfiles/h5diff_24.txt
@@ -1,2 +1,3 @@
datatype: </t1> and </t1>
0 differences found
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_25.txt b/tools/h5diff/testfiles/h5diff_25.txt
index 288c4da..e463ba1 100644
--- a/tools/h5diff/testfiles/h5diff_25.txt
+++ b/tools/h5diff/testfiles/h5diff_25.txt
@@ -1,2 +1,3 @@
link : </l1> and </l1>
0 differences found
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_26.txt b/tools/h5diff/testfiles/h5diff_26.txt
index 916cf63..8e1fcc3 100644
--- a/tools/h5diff/testfiles/h5diff_26.txt
+++ b/tools/h5diff/testfiles/h5diff_26.txt
@@ -1,2 +1,3 @@
group : </g1> and </g2>
1 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_27.txt b/tools/h5diff/testfiles/h5diff_27.txt
index 335119a..cbc128e 100644
--- a/tools/h5diff/testfiles/h5diff_27.txt
+++ b/tools/h5diff/testfiles/h5diff_27.txt
@@ -1,2 +1,3 @@
datatype: </t1> and </t2>
1 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_28.txt b/tools/h5diff/testfiles/h5diff_28.txt
index 5845fa9..07d01fe 100644
--- a/tools/h5diff/testfiles/h5diff_28.txt
+++ b/tools/h5diff/testfiles/h5diff_28.txt
@@ -1,2 +1,3 @@
link : </l1> and </l2>
1 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_300.txt b/tools/h5diff/testfiles/h5diff_300.txt
index 0cfc01b..e51643f 100755
--- a/tools/h5diff/testfiles/h5diff_300.txt
+++ b/tools/h5diff/testfiles/h5diff_300.txt
@@ -1,2 +1,3 @@
link : </link_g1> and </link_g2>
1 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_400.txt b/tools/h5diff/testfiles/h5diff_400.txt
index 4b910f5..97db70d 100644
--- a/tools/h5diff/testfiles/h5diff_400.txt
+++ b/tools/h5diff/testfiles/h5diff_400.txt
@@ -16,29 +16,26 @@ file1 file2
group : </> and </>
0 differences found
link : </softlink_dset1_1> and </softlink_dset1_1>
-dataset: </target_dset1> and </target_dset1>
+dataset: </softlink_dset1_1> and </softlink_dset1_1>
0 differences found
0 differences found
link : </softlink_dset1_2> and </softlink_dset1_2>
-dataset: </target_dset1> and </target_dset1>
+dataset: </softlink_dset1_2> and </softlink_dset1_2>
0 differences found
0 differences found
link : </softlink_dset2> and </softlink_dset2>
-dataset: </target_dset2> and </target_dset2>
+dataset: </softlink_dset2> and </softlink_dset2>
0 differences found
0 differences found
link : </softlink_group1> and </softlink_group1>
-group : </target_group> and </target_group>
+group : </softlink_group1> and </softlink_group1>
0 differences found
0 differences found
link : </softlink_group2> and </softlink_group2>
-group : </target_group> and </target_group>
+group : </softlink_group2> and </softlink_group2>
0 differences found
0 differences found
-warn: link target "/no_obj" doesn't exist
-warn: link target "/no_obj" doesn't exist
-link : </softlink_noexist> and </softlink_noexist>
-Comparison not supported: </no_obj> and </no_obj> are of type unknown type
+dangling link: </softlink_noexist> and </softlink_noexist>
0 differences found
dataset: </target_dset1> and </target_dset1>
0 differences found
@@ -48,7 +45,4 @@ group : </target_group> and </target_group>
0 differences found
dataset: </target_group/dset> and </target_group/dset>
0 differences found
---------------------------------
-Some objects are not comparable
---------------------------------
-Use -c for a list of objects.
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_401.txt b/tools/h5diff/testfiles/h5diff_401.txt
index 5c599e3..278729e 100644
--- a/tools/h5diff/testfiles/h5diff_401.txt
+++ b/tools/h5diff/testfiles/h5diff_401.txt
@@ -1,6 +1,6 @@
-dataset: </target_dset1> and </target_dset2>
+dataset: </softlink_dset1_1> and </target_dset2>
size: [2x4] [2x4]
-position target_dset1 target_dset2 difference
+position softlink_dset1_1 target_dset2 difference
------------------------------------------------------------
[ 0 1 ] 1 0 1
[ 0 2 ] 2 0 2
@@ -10,3 +10,4 @@ position target_dset1 target_dset2 difference
[ 1 2 ] 3 0 3
[ 1 3 ] 4 0 4
7 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_402.txt b/tools/h5diff/testfiles/h5diff_402.txt
index 228c8cc..b0f30ca 100644
--- a/tools/h5diff/testfiles/h5diff_402.txt
+++ b/tools/h5diff/testfiles/h5diff_402.txt
@@ -1,6 +1,6 @@
-dataset: </target_dset2> and </target_dset1>
+dataset: </target_dset2> and </softlink_dset1_1>
size: [2x4] [2x4]
-position target_dset2 target_dset1 difference
+position target_dset2 softlink_dset1_1 difference
------------------------------------------------------------
[ 0 1 ] 0 1 1
[ 0 2 ] 0 2 2
@@ -10,3 +10,4 @@ position target_dset2 target_dset1 difference
[ 1 2 ] 0 3 3
[ 1 3 ] 0 4 4
7 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_403.txt b/tools/h5diff/testfiles/h5diff_403.txt
index 5c599e3..068d01d 100644
--- a/tools/h5diff/testfiles/h5diff_403.txt
+++ b/tools/h5diff/testfiles/h5diff_403.txt
@@ -1,6 +1,6 @@
-dataset: </target_dset1> and </target_dset2>
+dataset: </softlink_dset1_1> and </softlink_dset2>
size: [2x4] [2x4]
-position target_dset1 target_dset2 difference
+position softlink_dset1_1 softlink_dset2 difference
------------------------------------------------------------
[ 0 1 ] 1 0 1
[ 0 2 ] 2 0 2
@@ -10,3 +10,4 @@ position target_dset1 target_dset2 difference
[ 1 2 ] 3 0 3
[ 1 3 ] 4 0 4
7 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_404.txt b/tools/h5diff/testfiles/h5diff_404.txt
index 2a0b856..c9a476d 100644
--- a/tools/h5diff/testfiles/h5diff_404.txt
+++ b/tools/h5diff/testfiles/h5diff_404.txt
@@ -12,25 +12,23 @@ file1 file2
group : </> and </>
0 differences found
external link: </ext_link_dset1> and </ext_link_dset1>
-dataset: </target_group/x_dset> and </target_group/x_dset>
+dataset: </ext_link_dset1> and </ext_link_dset1>
0 differences found
0 differences found
external link: </ext_link_dset2> and </ext_link_dset2>
-dataset: </target_group2/x_dset> and </target_group2/x_dset>
+dataset: </ext_link_dset2> and </ext_link_dset2>
0 differences found
0 differences found
external link: </ext_link_grp1> and </ext_link_grp1>
-group : </target_group> and </target_group>
+group : </ext_link_grp1> and </ext_link_grp1>
0 differences found
0 differences found
external link: </ext_link_grp2> and </ext_link_grp2>
-group : </target_group2> and </target_group2>
+group : </ext_link_grp2> and </ext_link_grp2>
0 differences found
0 differences found
-external link: </ext_link_noexist1> and </ext_link_noexist1>
-Object </no_obj> could not be found in <h5diff_extlink_trg.h5>
-Object </no_obj> could not be found in <h5diff_extlink_trg.h5>
+dangling link: </ext_link_noexist1> and </ext_link_noexist1>
0 differences found
-external link: </ext_link_noexist2> and </ext_link_noexist2>
-h5diff: <no_file.h5>: unable to open file
+dangling link: </ext_link_noexist2> and </ext_link_noexist2>
0 differences found
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_405.txt b/tools/h5diff/testfiles/h5diff_405.txt
index edbf22a..890dd33 100644
--- a/tools/h5diff/testfiles/h5diff_405.txt
+++ b/tools/h5diff/testfiles/h5diff_405.txt
@@ -1,6 +1,6 @@
-dataset: </target_group/x_dset> and </target_group2/x_dset>
+dataset: </ext_link_dset1> and </target_group2/x_dset>
size: [2x4] [2x4]
-position x_dset x_dset difference
+position ext_link_dset1 x_dset difference
------------------------------------------------------------
[ 0 1 ] 1 0 1
[ 0 2 ] 2 0 2
@@ -10,3 +10,4 @@ position x_dset x_dset difference
[ 1 2 ] 3 0 3
[ 1 3 ] 4 0 4
7 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_406.txt b/tools/h5diff/testfiles/h5diff_406.txt
index 7c5eb3e..7fa442a 100644
--- a/tools/h5diff/testfiles/h5diff_406.txt
+++ b/tools/h5diff/testfiles/h5diff_406.txt
@@ -1,6 +1,6 @@
-dataset: </target_group2/x_dset> and </target_group/x_dset>
+dataset: </target_group2/x_dset> and </ext_link_dset1>
size: [2x4] [2x4]
-position x_dset x_dset difference
+position x_dset ext_link_dset1 difference
------------------------------------------------------------
[ 0 1 ] 0 1 1
[ 0 2 ] 0 2 2
@@ -10,3 +10,4 @@ position x_dset x_dset difference
[ 1 2 ] 0 3 3
[ 1 3 ] 0 4 4
7 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_407.txt b/tools/h5diff/testfiles/h5diff_407.txt
index edbf22a..3693ab9 100644
--- a/tools/h5diff/testfiles/h5diff_407.txt
+++ b/tools/h5diff/testfiles/h5diff_407.txt
@@ -1,6 +1,6 @@
-dataset: </target_group/x_dset> and </target_group2/x_dset>
+dataset: </ext_link_dset1> and </ext_link_dset2>
size: [2x4] [2x4]
-position x_dset x_dset difference
+position ext_link_dset1 ext_link_dset2 difference
------------------------------------------------------------
[ 0 1 ] 1 0 1
[ 0 2 ] 2 0 2
@@ -10,3 +10,4 @@ position x_dset x_dset difference
[ 1 2 ] 3 0 3
[ 1 3 ] 4 0 4
7 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_408.txt b/tools/h5diff/testfiles/h5diff_408.txt
index 11a928a..e941f9b 100644
--- a/tools/h5diff/testfiles/h5diff_408.txt
+++ b/tools/h5diff/testfiles/h5diff_408.txt
@@ -1,6 +1,6 @@
-dataset: </target_dset1> and </target_group2/x_dset>
+dataset: </softlink_dset1_1> and </ext_link_dset2>
size: [2x4] [2x4]
-position target_dset1 x_dset difference
+position softlink_dset1_1 ext_link_dset2 difference
------------------------------------------------------------
[ 0 1 ] 1 0 1
[ 0 2 ] 2 0 2
@@ -10,3 +10,4 @@ position target_dset1 x_dset difference
[ 1 2 ] 3 0 3
[ 1 3 ] 4 0 4
7 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_409.txt b/tools/h5diff/testfiles/h5diff_409.txt
index 3b95e7c..007da7d 100644
--- a/tools/h5diff/testfiles/h5diff_409.txt
+++ b/tools/h5diff/testfiles/h5diff_409.txt
@@ -1,6 +1,6 @@
-dataset: </target_group2/x_dset> and </target_dset1>
+dataset: </ext_link_dset2> and </softlink_dset1_1>
size: [2x4] [2x4]
-position x_dset target_dset1 difference
+position ext_link_dset2 softlink_dset1_1 difference
------------------------------------------------------------
[ 0 1 ] 0 1 1
[ 0 2 ] 0 2 2
@@ -10,3 +10,4 @@ position x_dset target_dset1 difference
[ 1 2 ] 0 3 3
[ 1 3 ] 0 4 4
7 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_410.txt b/tools/h5diff/testfiles/h5diff_410.txt
index 8c645d2..b0924f6 100644
--- a/tools/h5diff/testfiles/h5diff_410.txt
+++ b/tools/h5diff/testfiles/h5diff_410.txt
@@ -24,51 +24,51 @@ file1 file2
group : </> and </>
0 differences found
link : </softlink1_to_dset1> and </softlink1_to_dset1>
-dataset: </target_dset1> and </target_dset1>
+dataset: </softlink1_to_dset1> and </softlink1_to_dset1>
0 differences found
0 differences found
link : </softlink1_to_slink1> and </softlink1_to_slink1>
-dataset: <softlink1_to_dset1> and <softlink1_to_dset1>
+dataset: </softlink1_to_slink1> and </softlink1_to_slink1>
0 differences found
0 differences found
link : </softlink1_to_slink2> and </softlink1_to_slink2>
-dataset: <softlink1_to_slink1> and <softlink1_to_slink1>
+dataset: </softlink1_to_slink2> and </softlink1_to_slink2>
0 differences found
0 differences found
link : </softlink2_to_dset2> and </softlink2_to_dset2>
-dataset: </target_dset2> and </target_dset2>
+dataset: </softlink2_to_dset2> and </softlink2_to_dset2>
0 differences found
0 differences found
link : </softlink2_to_slink1> and </softlink2_to_slink1>
-dataset: <softlink2_to_dset2> and <softlink2_to_dset2>
+dataset: </softlink2_to_slink1> and </softlink2_to_slink1>
0 differences found
0 differences found
link : </softlink2_to_slink2> and </softlink2_to_slink2>
-dataset: <softlink2_to_slink1> and <softlink2_to_slink1>
+dataset: </softlink2_to_slink2> and </softlink2_to_slink2>
0 differences found
0 differences found
link : </softlink3_to_group1> and </softlink3_to_group1>
-group : <target_group1> and <target_group1>
+group : </softlink3_to_group1> and </softlink3_to_group1>
0 differences found
0 differences found
link : </softlink3_to_slink1> and </softlink3_to_slink1>
-group : <softlink3_to_group1> and <softlink3_to_group1>
+group : </softlink3_to_slink1> and </softlink3_to_slink1>
0 differences found
0 differences found
link : </softlink3_to_slink2> and </softlink3_to_slink2>
-group : <softlink3_to_slink1> and <softlink3_to_slink1>
+group : </softlink3_to_slink2> and </softlink3_to_slink2>
0 differences found
0 differences found
link : </softlink4_to_group2> and </softlink4_to_group2>
-group : <target_group2> and <target_group2>
+group : </softlink4_to_group2> and </softlink4_to_group2>
0 differences found
0 differences found
link : </softlink4_to_slink1> and </softlink4_to_slink1>
-group : <softlink4_to_group2> and <softlink4_to_group2>
+group : </softlink4_to_slink1> and </softlink4_to_slink1>
0 differences found
0 differences found
link : </softlink4_to_slink2> and </softlink4_to_slink2>
-group : <softlink4_to_slink1> and <softlink4_to_slink1>
+group : </softlink4_to_slink2> and </softlink4_to_slink2>
0 differences found
0 differences found
dataset: </target_dset1> and </target_dset1>
@@ -83,3 +83,4 @@ group : </target_group1> and </target_group1>
0 differences found
group : </target_group2> and </target_group2>
0 differences found
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_411.txt b/tools/h5diff/testfiles/h5diff_411.txt
index 2775677..161ab34 100644
--- a/tools/h5diff/testfiles/h5diff_411.txt
+++ b/tools/h5diff/testfiles/h5diff_411.txt
@@ -1,6 +1,6 @@
-dataset: </target_dset2> and <softlink1_to_slink1>
+dataset: </target_dset2> and </softlink1_to_slink2>
size: [2x4] [2x4]
-position target_dset2 softlink1_to_slink1 difference
+position target_dset2 softlink1_to_slink2 difference
------------------------------------------------------------
[ 0 1 ] 0 1 1
[ 0 2 ] 0 2 2
@@ -10,3 +10,4 @@ position target_dset2 softlink1_to_slink1 difference
[ 1 2 ] 0 3 3
[ 1 3 ] 0 4 4
7 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_412.txt b/tools/h5diff/testfiles/h5diff_412.txt
index 0924099..bb8209c 100644
--- a/tools/h5diff/testfiles/h5diff_412.txt
+++ b/tools/h5diff/testfiles/h5diff_412.txt
@@ -1,6 +1,6 @@
-dataset: <softlink1_to_slink1> and </target_dset2>
+dataset: </softlink1_to_slink2> and </target_dset2>
size: [2x4] [2x4]
-position softlink1_to_slink1 target_dset2 difference
+position softlink1_to_slink2 target_dset2 difference
------------------------------------------------------------
[ 0 1 ] 1 0 1
[ 0 2 ] 2 0 2
@@ -10,3 +10,4 @@ position softlink1_to_slink1 target_dset2 difference
[ 1 2 ] 3 0 3
[ 1 3 ] 4 0 4
7 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_413.txt b/tools/h5diff/testfiles/h5diff_413.txt
index ae6cfea..8df3d51 100644
--- a/tools/h5diff/testfiles/h5diff_413.txt
+++ b/tools/h5diff/testfiles/h5diff_413.txt
@@ -1,6 +1,6 @@
-dataset: <softlink1_to_slink1> and <softlink2_to_slink1>
+dataset: </softlink1_to_slink2> and </softlink2_to_slink2>
size: [2x4] [2x4]
-position softlink1_to_slink1 softlink2_to_slink1 difference
+position softlink1_to_slink2 softlink2_to_slink2 difference
------------------------------------------------------------
[ 0 1 ] 1 0 1
[ 0 2 ] 2 0 2
@@ -10,3 +10,4 @@ position softlink1_to_slink1 softlink2_to_slink1 difference
[ 1 2 ] 3 0 3
[ 1 3 ] 4 0 4
7 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_414.txt b/tools/h5diff/testfiles/h5diff_414.txt
index 0f07a14..e7a991a 100644
--- a/tools/h5diff/testfiles/h5diff_414.txt
+++ b/tools/h5diff/testfiles/h5diff_414.txt
@@ -1,2 +1,3 @@
-group : </target_group> and <softlink3_to_slink1>
+group : </target_group> and </softlink3_to_slink2>
1 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_415.txt b/tools/h5diff/testfiles/h5diff_415.txt
index 3a9d863..1e97319 100644
--- a/tools/h5diff/testfiles/h5diff_415.txt
+++ b/tools/h5diff/testfiles/h5diff_415.txt
@@ -1,2 +1,3 @@
-group : <softlink3_to_slink1> and </target_group>
+group : </softlink3_to_slink2> and </target_group>
1 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_416.txt b/tools/h5diff/testfiles/h5diff_416.txt
index 39d88bc..e4e98b0 100644
--- a/tools/h5diff/testfiles/h5diff_416.txt
+++ b/tools/h5diff/testfiles/h5diff_416.txt
@@ -1,2 +1,3 @@
-group : <softlink3_to_slink1> and <softlink4_to_slink1>
+group : </softlink3_to_slink2> and </softlink4_to_slink2>
1 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_417.txt b/tools/h5diff/testfiles/h5diff_417.txt
index 56031e9..0ea2542 100644
--- a/tools/h5diff/testfiles/h5diff_417.txt
+++ b/tools/h5diff/testfiles/h5diff_417.txt
@@ -1,6 +1,3 @@
-warn: link target "/no_obj" doesn't exist
-</no_obj> is of type unknown type and </target_dset2> is of type H5G_DATASET
---------------------------------
-Some objects are not comparable
---------------------------------
-Use -c for a list of objects.
+obj1 </softlink_noexist> is a dangling link.
+1 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_418.txt b/tools/h5diff/testfiles/h5diff_418.txt
index 0222174..46222bb 100644
--- a/tools/h5diff/testfiles/h5diff_418.txt
+++ b/tools/h5diff/testfiles/h5diff_418.txt
@@ -1,6 +1,3 @@
-warn: link target "/no_obj" doesn't exist
-</target_dset2> is of type H5G_DATASET and </no_obj> is of type unknown type
---------------------------------
-Some objects are not comparable
---------------------------------
-Use -c for a list of objects.
+obj2 </softlink_noexist> is a dangling link.
+1 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_419.txt b/tools/h5diff/testfiles/h5diff_419.txt
index 836e95f..387c600 100644
--- a/tools/h5diff/testfiles/h5diff_419.txt
+++ b/tools/h5diff/testfiles/h5diff_419.txt
@@ -1,2 +1,3 @@
-error: <no_file.h5>: unable to open file
-error: unable to get external link info from "/ext_link_noexist2"
+obj1 </ext_link_noexist2> is a dangling link.
+1 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_420.txt b/tools/h5diff/testfiles/h5diff_420.txt
index 836e95f..f3e65d9 100644
--- a/tools/h5diff/testfiles/h5diff_420.txt
+++ b/tools/h5diff/testfiles/h5diff_420.txt
@@ -1,2 +1,3 @@
-error: <no_file.h5>: unable to open file
-error: unable to get external link info from "/ext_link_noexist2"
+obj2 </ext_link_noexist2> is a dangling link.
+1 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_421.txt b/tools/h5diff/testfiles/h5diff_421.txt
index c686b69..833c60c 100644
--- a/tools/h5diff/testfiles/h5diff_421.txt
+++ b/tools/h5diff/testfiles/h5diff_421.txt
@@ -1,2 +1,3 @@
-error: "/no_obj" doesn't exist
-error: unable to get external link info from "/ext_link_noexist1"
+obj2 </ext_link_noexist1> is a dangling link.
+1 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_422.txt b/tools/h5diff/testfiles/h5diff_422.txt
index c686b69..3e675d5 100644
--- a/tools/h5diff/testfiles/h5diff_422.txt
+++ b/tools/h5diff/testfiles/h5diff_422.txt
@@ -1,2 +1,3 @@
-error: "/no_obj" doesn't exist
-error: unable to get external link info from "/ext_link_noexist1"
+obj1 </ext_link_noexist1> is a dangling link.
+1 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_423.txt b/tools/h5diff/testfiles/h5diff_423.txt
index 5eb6766..1ebc157 100644
--- a/tools/h5diff/testfiles/h5diff_423.txt
+++ b/tools/h5diff/testfiles/h5diff_423.txt
@@ -1,6 +1,6 @@
-dataset: </dset1> and </dset2>
+dataset: </ext_link_to_slink1> and </dset2>
size: [2x4] [2x4]
-position dset1 dset2 difference
+position ext_link_to_slink1 dset2 difference
------------------------------------------------------------
[ 0 1 ] 0 1 1
[ 0 2 ] 0 2 2
@@ -10,3 +10,4 @@ position dset1 dset2 difference
[ 1 2 ] 0 3 3
[ 1 3 ] 0 4 4
7 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_424.txt b/tools/h5diff/testfiles/h5diff_424.txt
index cd240cf..9099c41 100644
--- a/tools/h5diff/testfiles/h5diff_424.txt
+++ b/tools/h5diff/testfiles/h5diff_424.txt
@@ -1,6 +1,6 @@
-dataset: </dset2> and </dset1>
+dataset: </dset2> and </ext_link_to_slink1>
size: [2x4] [2x4]
-position dset2 dset1 difference
+position dset2 ext_link_to_slink1 difference
------------------------------------------------------------
[ 0 1 ] 1 0 1
[ 0 2 ] 2 0 2
@@ -10,3 +10,4 @@ position dset2 dset1 difference
[ 1 2 ] 3 0 3
[ 1 3 ] 4 0 4
7 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_425.txt b/tools/h5diff/testfiles/h5diff_425.txt
index 5eb6766..03ceb78 100644
--- a/tools/h5diff/testfiles/h5diff_425.txt
+++ b/tools/h5diff/testfiles/h5diff_425.txt
@@ -1,6 +1,6 @@
-dataset: </dset1> and </dset2>
+dataset: </ext_link_to_slink1> and </ext_link_to_slink2>
size: [2x4] [2x4]
-position dset1 dset2 difference
+position ext_link_to_slink1 ext_link_to_slink2 difference
------------------------------------------------------------
[ 0 1 ] 0 1 1
[ 0 2 ] 0 2 2
@@ -10,3 +10,4 @@ position dset1 dset2 difference
[ 1 2 ] 0 3 3
[ 1 3 ] 0 4 4
7 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_450.txt b/tools/h5diff/testfiles/h5diff_450.txt
new file mode 100644
index 0000000..bf4f6e9
--- /dev/null
+++ b/tools/h5diff/testfiles/h5diff_450.txt
@@ -0,0 +1,35 @@
+
+file1 file2
+---------------------------------------
+ x x /
+ x x /dset1
+ x x /dset2
+ x x /ext_link1
+ x x /ext_link2
+ x x /ext_link3
+ x x /ext_link4
+ x x /soft_link1
+ x x /soft_link2
+ x x /soft_link3
+
+group : </> and </>
+0 differences found
+dataset: </dset1> and </dset1>
+0 differences found
+dataset: </dset2> and </dset2>
+0 differences found
+dangling link: </ext_link1> and </ext_link1>
+0 differences found
+obj2 </ext_link2> is a dangling link.
+1 differences found
+obj1 </ext_link3> is a dangling link.
+1 differences found
+dangling link: </ext_link4> and </ext_link4>
+0 differences found
+dangling link: </soft_link1> and </soft_link1>
+0 differences found
+obj2 </soft_link2> is a dangling link.
+1 differences found
+obj1 </soft_link3> is a dangling link.
+1 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_451.txt b/tools/h5diff/testfiles/h5diff_451.txt
new file mode 100644
index 0000000..0d30023
--- /dev/null
+++ b/tools/h5diff/testfiles/h5diff_451.txt
@@ -0,0 +1,28 @@
+
+file1 file2
+---------------------------------------
+ x x /
+ x x /dset1
+ x x /dset2
+ x x /ext_link1
+ x x /ext_link2
+ x x /ext_link3
+ x x /ext_link4
+ x x /soft_link1
+ x x /soft_link2
+ x x /soft_link3
+
+group : </> and </>
+0 differences found
+dataset: </dset1> and </dset1>
+0 differences found
+dataset: </dset2> and </dset2>
+0 differences found
+Warning: </ext_link1> is a dangling link.
+Warning: </ext_link2> is a dangling link.
+Warning: </ext_link3> is a dangling link.
+Warning: </ext_link4> is a dangling link.
+Warning: </soft_link1> is a dangling link.
+Warning: </soft_link2> is a dangling link.
+Warning: </soft_link3> is a dangling link.
+EXIT CODE: 2
diff --git a/tools/h5diff/testfiles/h5diff_452.txt b/tools/h5diff/testfiles/h5diff_452.txt
new file mode 100644
index 0000000..76e4457
--- /dev/null
+++ b/tools/h5diff/testfiles/h5diff_452.txt
@@ -0,0 +1,2 @@
+Error: --no-dangling-links must be used along with --follow-links option.
+EXIT CODE: 2
diff --git a/tools/h5diff/testfiles/h5diff_453.txt b/tools/h5diff/testfiles/h5diff_453.txt
new file mode 100644
index 0000000..9c4d61b
--- /dev/null
+++ b/tools/h5diff/testfiles/h5diff_453.txt
@@ -0,0 +1,47 @@
+
+file1 file2
+---------------------------------------
+ x x /
+ x x /softlink_dset1_1
+ x x /softlink_dset1_2
+ x x /softlink_dset2
+ x x /softlink_group1
+ x x /softlink_group2
+ x x /softlink_noexist
+ x x /target_dset1
+ x x /target_dset2
+ x x /target_group
+ x x /target_group/dset
+
+group : </> and </>
+0 differences found
+link : </softlink_dset1_1> and </softlink_dset1_1>
+dataset: </softlink_dset1_1> and </softlink_dset1_1>
+0 differences found
+0 differences found
+link : </softlink_dset1_2> and </softlink_dset1_2>
+dataset: </softlink_dset1_2> and </softlink_dset1_2>
+0 differences found
+0 differences found
+link : </softlink_dset2> and </softlink_dset2>
+dataset: </softlink_dset2> and </softlink_dset2>
+0 differences found
+0 differences found
+link : </softlink_group1> and </softlink_group1>
+group : </softlink_group1> and </softlink_group1>
+0 differences found
+0 differences found
+link : </softlink_group2> and </softlink_group2>
+group : </softlink_group2> and </softlink_group2>
+0 differences found
+0 differences found
+Warning: </softlink_noexist> is a dangling link.
+dataset: </target_dset1> and </target_dset1>
+0 differences found
+dataset: </target_dset2> and </target_dset2>
+0 differences found
+group : </target_group> and </target_group>
+0 differences found
+dataset: </target_group/dset> and </target_group/dset>
+0 differences found
+EXIT CODE: 2
diff --git a/tools/h5diff/testfiles/h5diff_454.txt b/tools/h5diff/testfiles/h5diff_454.txt
new file mode 100644
index 0000000..dcc2e9c
--- /dev/null
+++ b/tools/h5diff/testfiles/h5diff_454.txt
@@ -0,0 +1,2 @@
+Warning: </softlink_noexist> is a dangling link.
+EXIT CODE: 2
diff --git a/tools/h5diff/testfiles/h5diff_455.txt b/tools/h5diff/testfiles/h5diff_455.txt
new file mode 100644
index 0000000..dcc2e9c
--- /dev/null
+++ b/tools/h5diff/testfiles/h5diff_455.txt
@@ -0,0 +1,2 @@
+Warning: </softlink_noexist> is a dangling link.
+EXIT CODE: 2
diff --git a/tools/h5diff/testfiles/h5diff_456.txt b/tools/h5diff/testfiles/h5diff_456.txt
new file mode 100644
index 0000000..f20e403
--- /dev/null
+++ b/tools/h5diff/testfiles/h5diff_456.txt
@@ -0,0 +1,32 @@
+
+file1 file2
+---------------------------------------
+ x x /
+ x x /ext_link_dset1
+ x x /ext_link_dset2
+ x x /ext_link_grp1
+ x x /ext_link_grp2
+ x x /ext_link_noexist1
+ x x /ext_link_noexist2
+
+group : </> and </>
+0 differences found
+external link: </ext_link_dset1> and </ext_link_dset1>
+dataset: </ext_link_dset1> and </ext_link_dset1>
+0 differences found
+0 differences found
+external link: </ext_link_dset2> and </ext_link_dset2>
+dataset: </ext_link_dset2> and </ext_link_dset2>
+0 differences found
+0 differences found
+external link: </ext_link_grp1> and </ext_link_grp1>
+group : </ext_link_grp1> and </ext_link_grp1>
+0 differences found
+0 differences found
+external link: </ext_link_grp2> and </ext_link_grp2>
+group : </ext_link_grp2> and </ext_link_grp2>
+0 differences found
+0 differences found
+Warning: </ext_link_noexist1> is a dangling link.
+Warning: </ext_link_noexist2> is a dangling link.
+EXIT CODE: 2
diff --git a/tools/h5diff/testfiles/h5diff_457.txt b/tools/h5diff/testfiles/h5diff_457.txt
new file mode 100644
index 0000000..762ccdc
--- /dev/null
+++ b/tools/h5diff/testfiles/h5diff_457.txt
@@ -0,0 +1,2 @@
+Warning: </ext_link_noexist1> is a dangling link.
+EXIT CODE: 2
diff --git a/tools/h5diff/testfiles/h5diff_458.txt b/tools/h5diff/testfiles/h5diff_458.txt
new file mode 100644
index 0000000..067d665
--- /dev/null
+++ b/tools/h5diff/testfiles/h5diff_458.txt
@@ -0,0 +1,2 @@
+Warning: </ext_link_noexist2> is a dangling link.
+EXIT CODE: 2
diff --git a/tools/h5diff/testfiles/h5diff_459.txt b/tools/h5diff/testfiles/h5diff_459.txt
new file mode 100644
index 0000000..762ccdc
--- /dev/null
+++ b/tools/h5diff/testfiles/h5diff_459.txt
@@ -0,0 +1,2 @@
+Warning: </ext_link_noexist1> is a dangling link.
+EXIT CODE: 2
diff --git a/tools/h5diff/testfiles/h5diff_50.txt b/tools/h5diff/testfiles/h5diff_50.txt
index 65b563c..434b458 100644
--- a/tools/h5diff/testfiles/h5diff_50.txt
+++ b/tools/h5diff/testfiles/h5diff_50.txt
@@ -10,3 +10,4 @@ position dset0a dset0b difference
[ 2 0 ] 1 5 4
[ 2 1 ] 1 6 5
4 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_51.txt b/tools/h5diff/testfiles/h5diff_51.txt
index e6402cc..621ba2a 100644
--- a/tools/h5diff/testfiles/h5diff_51.txt
+++ b/tools/h5diff/testfiles/h5diff_51.txt
@@ -7,3 +7,4 @@ position dset1a dset1b difference
[ 2 0 ] 1 5 4
[ 2 1 ] 1 6 5
4 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_52.txt b/tools/h5diff/testfiles/h5diff_52.txt
index 88febb9..6667659 100644
--- a/tools/h5diff/testfiles/h5diff_52.txt
+++ b/tools/h5diff/testfiles/h5diff_52.txt
@@ -7,3 +7,4 @@ position dset2a dset2b difference
[ 2 0 ] 1 5 4
[ 2 1 ] 1 6 5
4 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_53.txt b/tools/h5diff/testfiles/h5diff_53.txt
index 554d71a..458d166 100644
--- a/tools/h5diff/testfiles/h5diff_53.txt
+++ b/tools/h5diff/testfiles/h5diff_53.txt
@@ -7,3 +7,4 @@ position dset3a dset4b difference
[ 2 0 ] 1 5 4
[ 2 1 ] 1 6 5
4 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_54.txt b/tools/h5diff/testfiles/h5diff_54.txt
index 1e8adfd..2ca60f8 100644
--- a/tools/h5diff/testfiles/h5diff_54.txt
+++ b/tools/h5diff/testfiles/h5diff_54.txt
@@ -7,3 +7,4 @@ position dset4a dset4b difference
[ 2 0 ] 1 5 4
[ 2 1 ] 1 6 5
4 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_55.txt b/tools/h5diff/testfiles/h5diff_55.txt
index f895955..1288887 100644
--- a/tools/h5diff/testfiles/h5diff_55.txt
+++ b/tools/h5diff/testfiles/h5diff_55.txt
@@ -7,3 +7,4 @@ position dset5a dset5b difference
[ 2 0 ] 1 5 4
[ 2 1 ] 1 6 5
4 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_56.txt b/tools/h5diff/testfiles/h5diff_56.txt
index 402db43..0e82860 100644
--- a/tools/h5diff/testfiles/h5diff_56.txt
+++ b/tools/h5diff/testfiles/h5diff_56.txt
@@ -7,3 +7,4 @@ position dset6a dset6b difference
[ 2 0 ] 1 5 4
[ 2 1 ] 1 6 5
4 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_57.txt b/tools/h5diff/testfiles/h5diff_57.txt
index a026077..61aaa57 100644
--- a/tools/h5diff/testfiles/h5diff_57.txt
+++ b/tools/h5diff/testfiles/h5diff_57.txt
@@ -8,3 +8,4 @@ Not comparable: </dset7a> has sign H5T_SGN_2 and </dset7b> has sign H5T_SGN_NONE
Some objects are not comparable
--------------------------------
Use -c for a list of objects.
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_58.txt b/tools/h5diff/testfiles/h5diff_58.txt
index c46cad3..768dd97 100644
--- a/tools/h5diff/testfiles/h5diff_58.txt
+++ b/tools/h5diff/testfiles/h5diff_58.txt
@@ -8,3 +8,4 @@ point #1 (2,2) (3,3)
point #3 (1,6) (2,5)
point #4 (2,8) (1,7)
4 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_600.txt b/tools/h5diff/testfiles/h5diff_600.txt
index 376e530..f76d4d5 100644
--- a/tools/h5diff/testfiles/h5diff_600.txt
+++ b/tools/h5diff/testfiles/h5diff_600.txt
@@ -3,65 +3,100 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[obj2]]
file2 File name of the second HDF5 file
[obj1] Name of an HDF5 object, in absolute path
[obj2] Name of an HDF5 object, in absolute path
+
OPTIONS
- -h, --help Print a usage message and exit
- -V, --version Print version number and exit
- -r, --report Report mode. Print differences
- -v, --verbose Verbose mode. Print differences, list of objects
- -q, --quiet Quiet mode. Do not do output
- -l, --link-follow Follow link(s)
+ -h, --help Print a usage message and exit.
+ -V, --version Print version number and exit.
+ -r, --report Report mode. Print differences.
+ -v, --verbose Verbose mode. Print differences, list of objects.
+ -q, --quiet Quiet mode. Do not produce output.
+ --follow-links Follow symbolic links (soft links and external links)
+ and compare the links' target objects.
+ If symbolic link(s) with the same name exist in the
+ files being compared, then determine whether the
+ target of each link is an existing object (dataset,
+ group, or named datatype) or the link is a dangling
+ link (a soft or external link pointing to a target
+ object that does not yet exist).
+ - If both symbolic links are dangling links, they
+ are treated as being the same; by default, h5diff
+ returns an exit code of 0. If, however,
+ --no-dangling-links is used with --follow-links,
+ this situation is treated as an error and h5diff
+ returns an exit code of 2.
+ - If only one of the two links is a dangling link,
+ they are treated as being different and h5diff
+ returns an exit code of 1. If, however,
+ --no-dangling-links is used with --follow-links,
+ this situation is treated as an error and h5diff
+ returns an exit code of 2.
+ - If both symbolic links point to existing objects,
+ h5diff compares the two objects.
+ If any symbolic link specified in the call to h5diff
+ does not exist, h5diff treats it as an error and
+ returns an exit code of 2.
+ --no-dangling-links Must be used with --follow-links option;
+ otherwise, h5diff shows error message and returns
+ an exit code of 2.
+ Check for any symbolic links (soft links or external
+ links) that do not resolve to an existing object
+ (dataset, group, or named datatype). If any
+ dangling link is found, this situation is treated as
+ an error and h5diff returns an exit code of 2.
-c, --compare List objects that are not comparable
-N, --nan Avoid NaNs detection
- -n C, --count=C Print differences up to C number, C is a positive integer.
- -d D, --delta=D Print difference if (|a-b| > D), D is a positive number.
- -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive number.
+ -n C, --count=C Print differences up to C number, C is a positive
+ integer.
+ -d D, --delta=D Print difference if (|a-b| > D), D is a positive
+ number.
+ -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive
+ number.
--use-system-epsilon Print difference if (|a-b| > EPSILON),
- where EPSILON (FLT_EPSILON or FLT_EPSILON) is the system epsilon value.
- If the system epsilon is not defined, use the value below:
+ where EPSILON (FLT_EPSILON or FLT_EPSILON) is the
+ system epsilon value.
+ If the system epsilon is not defined, use the value
+ below:
FLT_EPSILON = 1.19209E-07 for float
DBL_EPSILON = 2.22045E-16 for double
- -d, -p, and --use-system-epsilon options are used for comparing floating point values.
- By default, strict equality is used. Use -p or -d to set specific tolerance.
+ -d, -p, and --use-system-epsilon options are used for
+ comparing floating point values.
+ By default, strict equality is used. Use -p or -d to
+ set specific tolerance.
Modes of output:
-
Default mode: print the number of differences found and where they occured
-r Report mode: print the above plus the differences
-v Verbose mode: print the above plus a list of objects and warnings
-q Quiet mode: do not print output
Compare criteria
-
- If no objects [obj1[obj2]] are specified, h5diff only compares objects
- with the same absolute path in both files
+ If no objects [obj1[obj2]] are specified, h5diff only compares objects
+ with the same absolute path in both files
The compare criteria is:
- 1) datasets: numerical array differences 2) groups: name string difference
- 3) datatypes: the return value of H5Tequal 4) links: name string difference
- of the linked value
+ 1) datasets: numerical array differences
+ 2) groups: name string difference
+ 3) datatypes: the return value of H5Tequal
+ 4) links: name string difference of the linked value as default
+ (refer to --follow-links option).
- Return exit code:
-
- 1 if differences found, 0 if no differences, 2 if error
+ Exit code:
+ 0 if no differences, 1 if differences found, 2 if error
Examples of use:
-
1) h5diff file1 file2 /g1/dset1 /g1/dset2
-
Compares object '/g1/dset1' in file1 with '/g1/dset2' in file2
2) h5diff file1 file2 /g1/dset1
-
Compares object '/g1/dset1' in both files
3) h5diff file1 file2
-
Compares all objects in both files
- Note) file1 and file2 can be the same file. Use
-
- h5diff file1 file1 /g1/dset1 /g1/dset2
-
- to compare '/g1/dset1' and '/g1/dset2' in the same file
+ Notes:
+ file1 and file2 can be the same file.
+ Use h5diff file1 file1 /g1/dset1 /g1/dset2 to compare
+ '/g1/dset1' and '/g1/dset2' in the same file
h5diff error: missing file names
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_603.txt b/tools/h5diff/testfiles/h5diff_603.txt
index f8a858d..a5286df 100644
--- a/tools/h5diff/testfiles/h5diff_603.txt
+++ b/tools/h5diff/testfiles/h5diff_603.txt
@@ -4,64 +4,99 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[obj2]]
file2 File name of the second HDF5 file
[obj1] Name of an HDF5 object, in absolute path
[obj2] Name of an HDF5 object, in absolute path
+
OPTIONS
- -h, --help Print a usage message and exit
- -V, --version Print version number and exit
- -r, --report Report mode. Print differences
- -v, --verbose Verbose mode. Print differences, list of objects
- -q, --quiet Quiet mode. Do not do output
- -l, --link-follow Follow link(s)
+ -h, --help Print a usage message and exit.
+ -V, --version Print version number and exit.
+ -r, --report Report mode. Print differences.
+ -v, --verbose Verbose mode. Print differences, list of objects.
+ -q, --quiet Quiet mode. Do not produce output.
+ --follow-links Follow symbolic links (soft links and external links)
+ and compare the links' target objects.
+ If symbolic link(s) with the same name exist in the
+ files being compared, then determine whether the
+ target of each link is an existing object (dataset,
+ group, or named datatype) or the link is a dangling
+ link (a soft or external link pointing to a target
+ object that does not yet exist).
+ - If both symbolic links are dangling links, they
+ are treated as being the same; by default, h5diff
+ returns an exit code of 0. If, however,
+ --no-dangling-links is used with --follow-links,
+ this situation is treated as an error and h5diff
+ returns an exit code of 2.
+ - If only one of the two links is a dangling link,
+ they are treated as being different and h5diff
+ returns an exit code of 1. If, however,
+ --no-dangling-links is used with --follow-links,
+ this situation is treated as an error and h5diff
+ returns an exit code of 2.
+ - If both symbolic links point to existing objects,
+ h5diff compares the two objects.
+ If any symbolic link specified in the call to h5diff
+ does not exist, h5diff treats it as an error and
+ returns an exit code of 2.
+ --no-dangling-links Must be used with --follow-links option;
+ otherwise, h5diff shows error message and returns
+ an exit code of 2.
+ Check for any symbolic links (soft links or external
+ links) that do not resolve to an existing object
+ (dataset, group, or named datatype). If any
+ dangling link is found, this situation is treated as
+ an error and h5diff returns an exit code of 2.
-c, --compare List objects that are not comparable
-N, --nan Avoid NaNs detection
- -n C, --count=C Print differences up to C number, C is a positive integer.
- -d D, --delta=D Print difference if (|a-b| > D), D is a positive number.
- -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive number.
+ -n C, --count=C Print differences up to C number, C is a positive
+ integer.
+ -d D, --delta=D Print difference if (|a-b| > D), D is a positive
+ number.
+ -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive
+ number.
--use-system-epsilon Print difference if (|a-b| > EPSILON),
- where EPSILON (FLT_EPSILON or FLT_EPSILON) is the system epsilon value.
- If the system epsilon is not defined, use the value below:
+ where EPSILON (FLT_EPSILON or FLT_EPSILON) is the
+ system epsilon value.
+ If the system epsilon is not defined, use the value
+ below:
FLT_EPSILON = 1.19209E-07 for float
DBL_EPSILON = 2.22045E-16 for double
- -d, -p, and --use-system-epsilon options are used for comparing floating point values.
- By default, strict equality is used. Use -p or -d to set specific tolerance.
+ -d, -p, and --use-system-epsilon options are used for
+ comparing floating point values.
+ By default, strict equality is used. Use -p or -d to
+ set specific tolerance.
Modes of output:
-
Default mode: print the number of differences found and where they occured
-r Report mode: print the above plus the differences
-v Verbose mode: print the above plus a list of objects and warnings
-q Quiet mode: do not print output
Compare criteria
-
- If no objects [obj1[obj2]] are specified, h5diff only compares objects
- with the same absolute path in both files
+ If no objects [obj1[obj2]] are specified, h5diff only compares objects
+ with the same absolute path in both files
The compare criteria is:
- 1) datasets: numerical array differences 2) groups: name string difference
- 3) datatypes: the return value of H5Tequal 4) links: name string difference
- of the linked value
+ 1) datasets: numerical array differences
+ 2) groups: name string difference
+ 3) datatypes: the return value of H5Tequal
+ 4) links: name string difference of the linked value as default
+ (refer to --follow-links option).
- Return exit code:
-
- 1 if differences found, 0 if no differences, 2 if error
+ Exit code:
+ 0 if no differences, 1 if differences found, 2 if error
Examples of use:
-
1) h5diff file1 file2 /g1/dset1 /g1/dset2
-
Compares object '/g1/dset1' in file1 with '/g1/dset2' in file2
2) h5diff file1 file2 /g1/dset1
-
Compares object '/g1/dset1' in both files
3) h5diff file1 file2
-
Compares all objects in both files
- Note) file1 and file2 can be the same file. Use
-
- h5diff file1 file1 /g1/dset1 /g1/dset2
-
- to compare '/g1/dset1' and '/g1/dset2' in the same file
+ Notes:
+ file1 and file2 can be the same file.
+ Use h5diff file1 file1 /g1/dset1 /g1/dset2 to compare
+ '/g1/dset1' and '/g1/dset2' in the same file
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_604.txt b/tools/h5diff/testfiles/h5diff_604.txt
index 554f2ed..db14532 100644
--- a/tools/h5diff/testfiles/h5diff_604.txt
+++ b/tools/h5diff/testfiles/h5diff_604.txt
@@ -1,2 +1,3 @@
dataset: </g1/dset3> and </g1/dset4>
6 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_605.txt b/tools/h5diff/testfiles/h5diff_605.txt
index 554f2ed..db14532 100644
--- a/tools/h5diff/testfiles/h5diff_605.txt
+++ b/tools/h5diff/testfiles/h5diff_605.txt
@@ -1,2 +1,3 @@
dataset: </g1/dset3> and </g1/dset4>
6 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_606.txt b/tools/h5diff/testfiles/h5diff_606.txt
index ab317bd..ab8039e 100644
--- a/tools/h5diff/testfiles/h5diff_606.txt
+++ b/tools/h5diff/testfiles/h5diff_606.txt
@@ -4,64 +4,99 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[obj2]]
file2 File name of the second HDF5 file
[obj1] Name of an HDF5 object, in absolute path
[obj2] Name of an HDF5 object, in absolute path
+
OPTIONS
- -h, --help Print a usage message and exit
- -V, --version Print version number and exit
- -r, --report Report mode. Print differences
- -v, --verbose Verbose mode. Print differences, list of objects
- -q, --quiet Quiet mode. Do not do output
- -l, --link-follow Follow link(s)
+ -h, --help Print a usage message and exit.
+ -V, --version Print version number and exit.
+ -r, --report Report mode. Print differences.
+ -v, --verbose Verbose mode. Print differences, list of objects.
+ -q, --quiet Quiet mode. Do not produce output.
+ --follow-links Follow symbolic links (soft links and external links)
+ and compare the links' target objects.
+ If symbolic link(s) with the same name exist in the
+ files being compared, then determine whether the
+ target of each link is an existing object (dataset,
+ group, or named datatype) or the link is a dangling
+ link (a soft or external link pointing to a target
+ object that does not yet exist).
+ - If both symbolic links are dangling links, they
+ are treated as being the same; by default, h5diff
+ returns an exit code of 0. If, however,
+ --no-dangling-links is used with --follow-links,
+ this situation is treated as an error and h5diff
+ returns an exit code of 2.
+ - If only one of the two links is a dangling link,
+ they are treated as being different and h5diff
+ returns an exit code of 1. If, however,
+ --no-dangling-links is used with --follow-links,
+ this situation is treated as an error and h5diff
+ returns an exit code of 2.
+ - If both symbolic links point to existing objects,
+ h5diff compares the two objects.
+ If any symbolic link specified in the call to h5diff
+ does not exist, h5diff treats it as an error and
+ returns an exit code of 2.
+ --no-dangling-links Must be used with --follow-links option;
+ otherwise, h5diff shows error message and returns
+ an exit code of 2.
+ Check for any symbolic links (soft links or external
+ links) that do not resolve to an existing object
+ (dataset, group, or named datatype). If any
+ dangling link is found, this situation is treated as
+ an error and h5diff returns an exit code of 2.
-c, --compare List objects that are not comparable
-N, --nan Avoid NaNs detection
- -n C, --count=C Print differences up to C number, C is a positive integer.
- -d D, --delta=D Print difference if (|a-b| > D), D is a positive number.
- -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive number.
+ -n C, --count=C Print differences up to C number, C is a positive
+ integer.
+ -d D, --delta=D Print difference if (|a-b| > D), D is a positive
+ number.
+ -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive
+ number.
--use-system-epsilon Print difference if (|a-b| > EPSILON),
- where EPSILON (FLT_EPSILON or FLT_EPSILON) is the system epsilon value.
- If the system epsilon is not defined, use the value below:
+ where EPSILON (FLT_EPSILON or FLT_EPSILON) is the
+ system epsilon value.
+ If the system epsilon is not defined, use the value
+ below:
FLT_EPSILON = 1.19209E-07 for float
DBL_EPSILON = 2.22045E-16 for double
- -d, -p, and --use-system-epsilon options are used for comparing floating point values.
- By default, strict equality is used. Use -p or -d to set specific tolerance.
+ -d, -p, and --use-system-epsilon options are used for
+ comparing floating point values.
+ By default, strict equality is used. Use -p or -d to
+ set specific tolerance.
Modes of output:
-
Default mode: print the number of differences found and where they occured
-r Report mode: print the above plus the differences
-v Verbose mode: print the above plus a list of objects and warnings
-q Quiet mode: do not print output
Compare criteria
-
- If no objects [obj1[obj2]] are specified, h5diff only compares objects
- with the same absolute path in both files
+ If no objects [obj1[obj2]] are specified, h5diff only compares objects
+ with the same absolute path in both files
The compare criteria is:
- 1) datasets: numerical array differences 2) groups: name string difference
- 3) datatypes: the return value of H5Tequal 4) links: name string difference
- of the linked value
+ 1) datasets: numerical array differences
+ 2) groups: name string difference
+ 3) datatypes: the return value of H5Tequal
+ 4) links: name string difference of the linked value as default
+ (refer to --follow-links option).
- Return exit code:
-
- 1 if differences found, 0 if no differences, 2 if error
+ Exit code:
+ 0 if no differences, 1 if differences found, 2 if error
Examples of use:
-
1) h5diff file1 file2 /g1/dset1 /g1/dset2
-
Compares object '/g1/dset1' in file1 with '/g1/dset2' in file2
2) h5diff file1 file2 /g1/dset1
-
Compares object '/g1/dset1' in both files
3) h5diff file1 file2
-
Compares all objects in both files
- Note) file1 and file2 can be the same file. Use
-
- h5diff file1 file1 /g1/dset1 /g1/dset2
-
- to compare '/g1/dset1' and '/g1/dset2' in the same file
+ Notes:
+ file1 and file2 can be the same file.
+ Use h5diff file1 file1 /g1/dset1 /g1/dset2 to compare
+ '/g1/dset1' and '/g1/dset2' in the same file
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_607.txt b/tools/h5diff/testfiles/h5diff_607.txt
index 554f2ed..db14532 100644
--- a/tools/h5diff/testfiles/h5diff_607.txt
+++ b/tools/h5diff/testfiles/h5diff_607.txt
@@ -1,2 +1,3 @@
dataset: </g1/dset3> and </g1/dset4>
6 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_608.txt b/tools/h5diff/testfiles/h5diff_608.txt
index 554f2ed..db14532 100644
--- a/tools/h5diff/testfiles/h5diff_608.txt
+++ b/tools/h5diff/testfiles/h5diff_608.txt
@@ -1,2 +1,3 @@
dataset: </g1/dset3> and </g1/dset4>
6 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_609.txt b/tools/h5diff/testfiles/h5diff_609.txt
index e69de29..eca5994 100644
--- a/tools/h5diff/testfiles/h5diff_609.txt
+++ b/tools/h5diff/testfiles/h5diff_609.txt
@@ -0,0 +1 @@
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_610.txt b/tools/h5diff/testfiles/h5diff_610.txt
index 554f2ed..db14532 100644
--- a/tools/h5diff/testfiles/h5diff_610.txt
+++ b/tools/h5diff/testfiles/h5diff_610.txt
@@ -1,2 +1,3 @@
dataset: </g1/dset3> and </g1/dset4>
6 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_612.txt b/tools/h5diff/testfiles/h5diff_612.txt
index 875e17e..686ff15 100644
--- a/tools/h5diff/testfiles/h5diff_612.txt
+++ b/tools/h5diff/testfiles/h5diff_612.txt
@@ -4,64 +4,99 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[obj2]]
file2 File name of the second HDF5 file
[obj1] Name of an HDF5 object, in absolute path
[obj2] Name of an HDF5 object, in absolute path
+
OPTIONS
- -h, --help Print a usage message and exit
- -V, --version Print version number and exit
- -r, --report Report mode. Print differences
- -v, --verbose Verbose mode. Print differences, list of objects
- -q, --quiet Quiet mode. Do not do output
- -l, --link-follow Follow link(s)
+ -h, --help Print a usage message and exit.
+ -V, --version Print version number and exit.
+ -r, --report Report mode. Print differences.
+ -v, --verbose Verbose mode. Print differences, list of objects.
+ -q, --quiet Quiet mode. Do not produce output.
+ --follow-links Follow symbolic links (soft links and external links)
+ and compare the links' target objects.
+ If symbolic link(s) with the same name exist in the
+ files being compared, then determine whether the
+ target of each link is an existing object (dataset,
+ group, or named datatype) or the link is a dangling
+ link (a soft or external link pointing to a target
+ object that does not yet exist).
+ - If both symbolic links are dangling links, they
+ are treated as being the same; by default, h5diff
+ returns an exit code of 0. If, however,
+ --no-dangling-links is used with --follow-links,
+ this situation is treated as an error and h5diff
+ returns an exit code of 2.
+ - If only one of the two links is a dangling link,
+ they are treated as being different and h5diff
+ returns an exit code of 1. If, however,
+ --no-dangling-links is used with --follow-links,
+ this situation is treated as an error and h5diff
+ returns an exit code of 2.
+ - If both symbolic links point to existing objects,
+ h5diff compares the two objects.
+ If any symbolic link specified in the call to h5diff
+ does not exist, h5diff treats it as an error and
+ returns an exit code of 2.
+ --no-dangling-links Must be used with --follow-links option;
+ otherwise, h5diff shows error message and returns
+ an exit code of 2.
+ Check for any symbolic links (soft links or external
+ links) that do not resolve to an existing object
+ (dataset, group, or named datatype). If any
+ dangling link is found, this situation is treated as
+ an error and h5diff returns an exit code of 2.
-c, --compare List objects that are not comparable
-N, --nan Avoid NaNs detection
- -n C, --count=C Print differences up to C number, C is a positive integer.
- -d D, --delta=D Print difference if (|a-b| > D), D is a positive number.
- -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive number.
+ -n C, --count=C Print differences up to C number, C is a positive
+ integer.
+ -d D, --delta=D Print difference if (|a-b| > D), D is a positive
+ number.
+ -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive
+ number.
--use-system-epsilon Print difference if (|a-b| > EPSILON),
- where EPSILON (FLT_EPSILON or FLT_EPSILON) is the system epsilon value.
- If the system epsilon is not defined, use the value below:
+ where EPSILON (FLT_EPSILON or FLT_EPSILON) is the
+ system epsilon value.
+ If the system epsilon is not defined, use the value
+ below:
FLT_EPSILON = 1.19209E-07 for float
DBL_EPSILON = 2.22045E-16 for double
- -d, -p, and --use-system-epsilon options are used for comparing floating point values.
- By default, strict equality is used. Use -p or -d to set specific tolerance.
+ -d, -p, and --use-system-epsilon options are used for
+ comparing floating point values.
+ By default, strict equality is used. Use -p or -d to
+ set specific tolerance.
Modes of output:
-
Default mode: print the number of differences found and where they occured
-r Report mode: print the above plus the differences
-v Verbose mode: print the above plus a list of objects and warnings
-q Quiet mode: do not print output
Compare criteria
-
- If no objects [obj1[obj2]] are specified, h5diff only compares objects
- with the same absolute path in both files
+ If no objects [obj1[obj2]] are specified, h5diff only compares objects
+ with the same absolute path in both files
The compare criteria is:
- 1) datasets: numerical array differences 2) groups: name string difference
- 3) datatypes: the return value of H5Tequal 4) links: name string difference
- of the linked value
+ 1) datasets: numerical array differences
+ 2) groups: name string difference
+ 3) datatypes: the return value of H5Tequal
+ 4) links: name string difference of the linked value as default
+ (refer to --follow-links option).
- Return exit code:
-
- 1 if differences found, 0 if no differences, 2 if error
+ Exit code:
+ 0 if no differences, 1 if differences found, 2 if error
Examples of use:
-
1) h5diff file1 file2 /g1/dset1 /g1/dset2
-
Compares object '/g1/dset1' in file1 with '/g1/dset2' in file2
2) h5diff file1 file2 /g1/dset1
-
Compares object '/g1/dset1' in both files
3) h5diff file1 file2
-
Compares all objects in both files
- Note) file1 and file2 can be the same file. Use
-
- h5diff file1 file1 /g1/dset1 /g1/dset2
-
- to compare '/g1/dset1' and '/g1/dset2' in the same file
+ Notes:
+ file1 and file2 can be the same file.
+ Use h5diff file1 file1 /g1/dset1 /g1/dset2 to compare
+ '/g1/dset1' and '/g1/dset2' in the same file
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_613.txt b/tools/h5diff/testfiles/h5diff_613.txt
index 554f2ed..db14532 100644
--- a/tools/h5diff/testfiles/h5diff_613.txt
+++ b/tools/h5diff/testfiles/h5diff_613.txt
@@ -1,2 +1,3 @@
dataset: </g1/dset3> and </g1/dset4>
6 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_614.txt b/tools/h5diff/testfiles/h5diff_614.txt
index 554f2ed..db14532 100644
--- a/tools/h5diff/testfiles/h5diff_614.txt
+++ b/tools/h5diff/testfiles/h5diff_614.txt
@@ -1,2 +1,3 @@
dataset: </g1/dset3> and </g1/dset4>
6 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_615.txt b/tools/h5diff/testfiles/h5diff_615.txt
index 258124a..cf779c5 100644
--- a/tools/h5diff/testfiles/h5diff_615.txt
+++ b/tools/h5diff/testfiles/h5diff_615.txt
@@ -4,64 +4,99 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[obj2]]
file2 File name of the second HDF5 file
[obj1] Name of an HDF5 object, in absolute path
[obj2] Name of an HDF5 object, in absolute path
+
OPTIONS
- -h, --help Print a usage message and exit
- -V, --version Print version number and exit
- -r, --report Report mode. Print differences
- -v, --verbose Verbose mode. Print differences, list of objects
- -q, --quiet Quiet mode. Do not do output
- -l, --link-follow Follow link(s)
+ -h, --help Print a usage message and exit.
+ -V, --version Print version number and exit.
+ -r, --report Report mode. Print differences.
+ -v, --verbose Verbose mode. Print differences, list of objects.
+ -q, --quiet Quiet mode. Do not produce output.
+ --follow-links Follow symbolic links (soft links and external links)
+ and compare the links' target objects.
+ If symbolic link(s) with the same name exist in the
+ files being compared, then determine whether the
+ target of each link is an existing object (dataset,
+ group, or named datatype) or the link is a dangling
+ link (a soft or external link pointing to a target
+ object that does not yet exist).
+ - If both symbolic links are dangling links, they
+ are treated as being the same; by default, h5diff
+ returns an exit code of 0. If, however,
+ --no-dangling-links is used with --follow-links,
+ this situation is treated as an error and h5diff
+ returns an exit code of 2.
+ - If only one of the two links is a dangling link,
+ they are treated as being different and h5diff
+ returns an exit code of 1. If, however,
+ --no-dangling-links is used with --follow-links,
+ this situation is treated as an error and h5diff
+ returns an exit code of 2.
+ - If both symbolic links point to existing objects,
+ h5diff compares the two objects.
+ If any symbolic link specified in the call to h5diff
+ does not exist, h5diff treats it as an error and
+ returns an exit code of 2.
+ --no-dangling-links Must be used with --follow-links option;
+ otherwise, h5diff shows error message and returns
+ an exit code of 2.
+ Check for any symbolic links (soft links or external
+ links) that do not resolve to an existing object
+ (dataset, group, or named datatype). If any
+ dangling link is found, this situation is treated as
+ an error and h5diff returns an exit code of 2.
-c, --compare List objects that are not comparable
-N, --nan Avoid NaNs detection
- -n C, --count=C Print differences up to C number, C is a positive integer.
- -d D, --delta=D Print difference if (|a-b| > D), D is a positive number.
- -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive number.
+ -n C, --count=C Print differences up to C number, C is a positive
+ integer.
+ -d D, --delta=D Print difference if (|a-b| > D), D is a positive
+ number.
+ -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive
+ number.
--use-system-epsilon Print difference if (|a-b| > EPSILON),
- where EPSILON (FLT_EPSILON or FLT_EPSILON) is the system epsilon value.
- If the system epsilon is not defined, use the value below:
+ where EPSILON (FLT_EPSILON or FLT_EPSILON) is the
+ system epsilon value.
+ If the system epsilon is not defined, use the value
+ below:
FLT_EPSILON = 1.19209E-07 for float
DBL_EPSILON = 2.22045E-16 for double
- -d, -p, and --use-system-epsilon options are used for comparing floating point values.
- By default, strict equality is used. Use -p or -d to set specific tolerance.
+ -d, -p, and --use-system-epsilon options are used for
+ comparing floating point values.
+ By default, strict equality is used. Use -p or -d to
+ set specific tolerance.
Modes of output:
-
Default mode: print the number of differences found and where they occured
-r Report mode: print the above plus the differences
-v Verbose mode: print the above plus a list of objects and warnings
-q Quiet mode: do not print output
Compare criteria
-
- If no objects [obj1[obj2]] are specified, h5diff only compares objects
- with the same absolute path in both files
+ If no objects [obj1[obj2]] are specified, h5diff only compares objects
+ with the same absolute path in both files
The compare criteria is:
- 1) datasets: numerical array differences 2) groups: name string difference
- 3) datatypes: the return value of H5Tequal 4) links: name string difference
- of the linked value
+ 1) datasets: numerical array differences
+ 2) groups: name string difference
+ 3) datatypes: the return value of H5Tequal
+ 4) links: name string difference of the linked value as default
+ (refer to --follow-links option).
- Return exit code:
-
- 1 if differences found, 0 if no differences, 2 if error
+ Exit code:
+ 0 if no differences, 1 if differences found, 2 if error
Examples of use:
-
1) h5diff file1 file2 /g1/dset1 /g1/dset2
-
Compares object '/g1/dset1' in file1 with '/g1/dset2' in file2
2) h5diff file1 file2 /g1/dset1
-
Compares object '/g1/dset1' in both files
3) h5diff file1 file2
-
Compares all objects in both files
- Note) file1 and file2 can be the same file. Use
-
- h5diff file1 file1 /g1/dset1 /g1/dset2
-
- to compare '/g1/dset1' and '/g1/dset2' in the same file
+ Notes:
+ file1 and file2 can be the same file.
+ Use h5diff file1 file1 /g1/dset1 /g1/dset2 to compare
+ '/g1/dset1' and '/g1/dset2' in the same file
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_616.txt b/tools/h5diff/testfiles/h5diff_616.txt
index 47a1364..3bc194a 100644
--- a/tools/h5diff/testfiles/h5diff_616.txt
+++ b/tools/h5diff/testfiles/h5diff_616.txt
@@ -1,2 +1,3 @@
dataset: </g1/dset3> and </g1/dset4>
2 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_617.txt b/tools/h5diff/testfiles/h5diff_617.txt
index 47a1364..3bc194a 100644
--- a/tools/h5diff/testfiles/h5diff_617.txt
+++ b/tools/h5diff/testfiles/h5diff_617.txt
@@ -1,2 +1,3 @@
dataset: </g1/dset3> and </g1/dset4>
2 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_618.txt b/tools/h5diff/testfiles/h5diff_618.txt
index e69de29..eca5994 100644
--- a/tools/h5diff/testfiles/h5diff_618.txt
+++ b/tools/h5diff/testfiles/h5diff_618.txt
@@ -0,0 +1 @@
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_619.txt b/tools/h5diff/testfiles/h5diff_619.txt
index 554f2ed..db14532 100644
--- a/tools/h5diff/testfiles/h5diff_619.txt
+++ b/tools/h5diff/testfiles/h5diff_619.txt
@@ -1,2 +1,3 @@
dataset: </g1/dset3> and </g1/dset4>
6 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_621.txt b/tools/h5diff/testfiles/h5diff_621.txt
index 1fd7f08..041bb7b 100644
--- a/tools/h5diff/testfiles/h5diff_621.txt
+++ b/tools/h5diff/testfiles/h5diff_621.txt
@@ -4,64 +4,99 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[obj2]]
file2 File name of the second HDF5 file
[obj1] Name of an HDF5 object, in absolute path
[obj2] Name of an HDF5 object, in absolute path
+
OPTIONS
- -h, --help Print a usage message and exit
- -V, --version Print version number and exit
- -r, --report Report mode. Print differences
- -v, --verbose Verbose mode. Print differences, list of objects
- -q, --quiet Quiet mode. Do not do output
- -l, --link-follow Follow link(s)
+ -h, --help Print a usage message and exit.
+ -V, --version Print version number and exit.
+ -r, --report Report mode. Print differences.
+ -v, --verbose Verbose mode. Print differences, list of objects.
+ -q, --quiet Quiet mode. Do not produce output.
+ --follow-links Follow symbolic links (soft links and external links)
+ and compare the links' target objects.
+ If symbolic link(s) with the same name exist in the
+ files being compared, then determine whether the
+ target of each link is an existing object (dataset,
+ group, or named datatype) or the link is a dangling
+ link (a soft or external link pointing to a target
+ object that does not yet exist).
+ - If both symbolic links are dangling links, they
+ are treated as being the same; by default, h5diff
+ returns an exit code of 0. If, however,
+ --no-dangling-links is used with --follow-links,
+ this situation is treated as an error and h5diff
+ returns an exit code of 2.
+ - If only one of the two links is a dangling link,
+ they are treated as being different and h5diff
+ returns an exit code of 1. If, however,
+ --no-dangling-links is used with --follow-links,
+ this situation is treated as an error and h5diff
+ returns an exit code of 2.
+ - If both symbolic links point to existing objects,
+ h5diff compares the two objects.
+ If any symbolic link specified in the call to h5diff
+ does not exist, h5diff treats it as an error and
+ returns an exit code of 2.
+ --no-dangling-links Must be used with --follow-links option;
+ otherwise, h5diff shows error message and returns
+ an exit code of 2.
+ Check for any symbolic links (soft links or external
+ links) that do not resolve to an existing object
+ (dataset, group, or named datatype). If any
+ dangling link is found, this situation is treated as
+ an error and h5diff returns an exit code of 2.
-c, --compare List objects that are not comparable
-N, --nan Avoid NaNs detection
- -n C, --count=C Print differences up to C number, C is a positive integer.
- -d D, --delta=D Print difference if (|a-b| > D), D is a positive number.
- -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive number.
+ -n C, --count=C Print differences up to C number, C is a positive
+ integer.
+ -d D, --delta=D Print difference if (|a-b| > D), D is a positive
+ number.
+ -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive
+ number.
--use-system-epsilon Print difference if (|a-b| > EPSILON),
- where EPSILON (FLT_EPSILON or FLT_EPSILON) is the system epsilon value.
- If the system epsilon is not defined, use the value below:
+ where EPSILON (FLT_EPSILON or FLT_EPSILON) is the
+ system epsilon value.
+ If the system epsilon is not defined, use the value
+ below:
FLT_EPSILON = 1.19209E-07 for float
DBL_EPSILON = 2.22045E-16 for double
- -d, -p, and --use-system-epsilon options are used for comparing floating point values.
- By default, strict equality is used. Use -p or -d to set specific tolerance.
+ -d, -p, and --use-system-epsilon options are used for
+ comparing floating point values.
+ By default, strict equality is used. Use -p or -d to
+ set specific tolerance.
Modes of output:
-
Default mode: print the number of differences found and where they occured
-r Report mode: print the above plus the differences
-v Verbose mode: print the above plus a list of objects and warnings
-q Quiet mode: do not print output
Compare criteria
-
- If no objects [obj1[obj2]] are specified, h5diff only compares objects
- with the same absolute path in both files
+ If no objects [obj1[obj2]] are specified, h5diff only compares objects
+ with the same absolute path in both files
The compare criteria is:
- 1) datasets: numerical array differences 2) groups: name string difference
- 3) datatypes: the return value of H5Tequal 4) links: name string difference
- of the linked value
+ 1) datasets: numerical array differences
+ 2) groups: name string difference
+ 3) datatypes: the return value of H5Tequal
+ 4) links: name string difference of the linked value as default
+ (refer to --follow-links option).
- Return exit code:
-
- 1 if differences found, 0 if no differences, 2 if error
+ Exit code:
+ 0 if no differences, 1 if differences found, 2 if error
Examples of use:
-
1) h5diff file1 file2 /g1/dset1 /g1/dset2
-
Compares object '/g1/dset1' in file1 with '/g1/dset2' in file2
2) h5diff file1 file2 /g1/dset1
-
Compares object '/g1/dset1' in both files
3) h5diff file1 file2
-
Compares all objects in both files
- Note) file1 and file2 can be the same file. Use
-
- h5diff file1 file1 /g1/dset1 /g1/dset2
-
- to compare '/g1/dset1' and '/g1/dset2' in the same file
+ Notes:
+ file1 and file2 can be the same file.
+ Use h5diff file1 file1 /g1/dset1 /g1/dset2 to compare
+ '/g1/dset1' and '/g1/dset2' in the same file
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_622.txt b/tools/h5diff/testfiles/h5diff_622.txt
index bf15c2a..923bab5 100644
--- a/tools/h5diff/testfiles/h5diff_622.txt
+++ b/tools/h5diff/testfiles/h5diff_622.txt
@@ -4,64 +4,99 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[obj2]]
file2 File name of the second HDF5 file
[obj1] Name of an HDF5 object, in absolute path
[obj2] Name of an HDF5 object, in absolute path
+
OPTIONS
- -h, --help Print a usage message and exit
- -V, --version Print version number and exit
- -r, --report Report mode. Print differences
- -v, --verbose Verbose mode. Print differences, list of objects
- -q, --quiet Quiet mode. Do not do output
- -l, --link-follow Follow link(s)
+ -h, --help Print a usage message and exit.
+ -V, --version Print version number and exit.
+ -r, --report Report mode. Print differences.
+ -v, --verbose Verbose mode. Print differences, list of objects.
+ -q, --quiet Quiet mode. Do not produce output.
+ --follow-links Follow symbolic links (soft links and external links)
+ and compare the links' target objects.
+ If symbolic link(s) with the same name exist in the
+ files being compared, then determine whether the
+ target of each link is an existing object (dataset,
+ group, or named datatype) or the link is a dangling
+ link (a soft or external link pointing to a target
+ object that does not yet exist).
+ - If both symbolic links are dangling links, they
+ are treated as being the same; by default, h5diff
+ returns an exit code of 0. If, however,
+ --no-dangling-links is used with --follow-links,
+ this situation is treated as an error and h5diff
+ returns an exit code of 2.
+ - If only one of the two links is a dangling link,
+ they are treated as being different and h5diff
+ returns an exit code of 1. If, however,
+ --no-dangling-links is used with --follow-links,
+ this situation is treated as an error and h5diff
+ returns an exit code of 2.
+ - If both symbolic links point to existing objects,
+ h5diff compares the two objects.
+ If any symbolic link specified in the call to h5diff
+ does not exist, h5diff treats it as an error and
+ returns an exit code of 2.
+ --no-dangling-links Must be used with --follow-links option;
+ otherwise, h5diff shows error message and returns
+ an exit code of 2.
+ Check for any symbolic links (soft links or external
+ links) that do not resolve to an existing object
+ (dataset, group, or named datatype). If any
+ dangling link is found, this situation is treated as
+ an error and h5diff returns an exit code of 2.
-c, --compare List objects that are not comparable
-N, --nan Avoid NaNs detection
- -n C, --count=C Print differences up to C number, C is a positive integer.
- -d D, --delta=D Print difference if (|a-b| > D), D is a positive number.
- -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive number.
+ -n C, --count=C Print differences up to C number, C is a positive
+ integer.
+ -d D, --delta=D Print difference if (|a-b| > D), D is a positive
+ number.
+ -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive
+ number.
--use-system-epsilon Print difference if (|a-b| > EPSILON),
- where EPSILON (FLT_EPSILON or FLT_EPSILON) is the system epsilon value.
- If the system epsilon is not defined, use the value below:
+ where EPSILON (FLT_EPSILON or FLT_EPSILON) is the
+ system epsilon value.
+ If the system epsilon is not defined, use the value
+ below:
FLT_EPSILON = 1.19209E-07 for float
DBL_EPSILON = 2.22045E-16 for double
- -d, -p, and --use-system-epsilon options are used for comparing floating point values.
- By default, strict equality is used. Use -p or -d to set specific tolerance.
+ -d, -p, and --use-system-epsilon options are used for
+ comparing floating point values.
+ By default, strict equality is used. Use -p or -d to
+ set specific tolerance.
Modes of output:
-
Default mode: print the number of differences found and where they occured
-r Report mode: print the above plus the differences
-v Verbose mode: print the above plus a list of objects and warnings
-q Quiet mode: do not print output
Compare criteria
-
- If no objects [obj1[obj2]] are specified, h5diff only compares objects
- with the same absolute path in both files
+ If no objects [obj1[obj2]] are specified, h5diff only compares objects
+ with the same absolute path in both files
The compare criteria is:
- 1) datasets: numerical array differences 2) groups: name string difference
- 3) datatypes: the return value of H5Tequal 4) links: name string difference
- of the linked value
+ 1) datasets: numerical array differences
+ 2) groups: name string difference
+ 3) datatypes: the return value of H5Tequal
+ 4) links: name string difference of the linked value as default
+ (refer to --follow-links option).
- Return exit code:
-
- 1 if differences found, 0 if no differences, 2 if error
+ Exit code:
+ 0 if no differences, 1 if differences found, 2 if error
Examples of use:
-
1) h5diff file1 file2 /g1/dset1 /g1/dset2
-
Compares object '/g1/dset1' in file1 with '/g1/dset2' in file2
2) h5diff file1 file2 /g1/dset1
-
Compares object '/g1/dset1' in both files
3) h5diff file1 file2
-
Compares all objects in both files
- Note) file1 and file2 can be the same file. Use
-
- h5diff file1 file1 /g1/dset1 /g1/dset2
-
- to compare '/g1/dset1' and '/g1/dset2' in the same file
+ Notes:
+ file1 and file2 can be the same file.
+ Use h5diff file1 file1 /g1/dset1 /g1/dset2 to compare
+ '/g1/dset1' and '/g1/dset2' in the same file
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_623.txt b/tools/h5diff/testfiles/h5diff_623.txt
index 5186dcc..405a211 100644
--- a/tools/h5diff/testfiles/h5diff_623.txt
+++ b/tools/h5diff/testfiles/h5diff_623.txt
@@ -4,64 +4,99 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[obj2]]
file2 File name of the second HDF5 file
[obj1] Name of an HDF5 object, in absolute path
[obj2] Name of an HDF5 object, in absolute path
+
OPTIONS
- -h, --help Print a usage message and exit
- -V, --version Print version number and exit
- -r, --report Report mode. Print differences
- -v, --verbose Verbose mode. Print differences, list of objects
- -q, --quiet Quiet mode. Do not do output
- -l, --link-follow Follow link(s)
+ -h, --help Print a usage message and exit.
+ -V, --version Print version number and exit.
+ -r, --report Report mode. Print differences.
+ -v, --verbose Verbose mode. Print differences, list of objects.
+ -q, --quiet Quiet mode. Do not produce output.
+ --follow-links Follow symbolic links (soft links and external links)
+ and compare the links' target objects.
+ If symbolic link(s) with the same name exist in the
+ files being compared, then determine whether the
+ target of each link is an existing object (dataset,
+ group, or named datatype) or the link is a dangling
+ link (a soft or external link pointing to a target
+ object that does not yet exist).
+ - If both symbolic links are dangling links, they
+ are treated as being the same; by default, h5diff
+ returns an exit code of 0. If, however,
+ --no-dangling-links is used with --follow-links,
+ this situation is treated as an error and h5diff
+ returns an exit code of 2.
+ - If only one of the two links is a dangling link,
+ they are treated as being different and h5diff
+ returns an exit code of 1. If, however,
+ --no-dangling-links is used with --follow-links,
+ this situation is treated as an error and h5diff
+ returns an exit code of 2.
+ - If both symbolic links point to existing objects,
+ h5diff compares the two objects.
+ If any symbolic link specified in the call to h5diff
+ does not exist, h5diff treats it as an error and
+ returns an exit code of 2.
+ --no-dangling-links Must be used with --follow-links option;
+ otherwise, h5diff shows error message and returns
+ an exit code of 2.
+ Check for any symbolic links (soft links or external
+ links) that do not resolve to an existing object
+ (dataset, group, or named datatype). If any
+ dangling link is found, this situation is treated as
+ an error and h5diff returns an exit code of 2.
-c, --compare List objects that are not comparable
-N, --nan Avoid NaNs detection
- -n C, --count=C Print differences up to C number, C is a positive integer.
- -d D, --delta=D Print difference if (|a-b| > D), D is a positive number.
- -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive number.
+ -n C, --count=C Print differences up to C number, C is a positive
+ integer.
+ -d D, --delta=D Print difference if (|a-b| > D), D is a positive
+ number.
+ -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive
+ number.
--use-system-epsilon Print difference if (|a-b| > EPSILON),
- where EPSILON (FLT_EPSILON or FLT_EPSILON) is the system epsilon value.
- If the system epsilon is not defined, use the value below:
+ where EPSILON (FLT_EPSILON or FLT_EPSILON) is the
+ system epsilon value.
+ If the system epsilon is not defined, use the value
+ below:
FLT_EPSILON = 1.19209E-07 for float
DBL_EPSILON = 2.22045E-16 for double
- -d, -p, and --use-system-epsilon options are used for comparing floating point values.
- By default, strict equality is used. Use -p or -d to set specific tolerance.
+ -d, -p, and --use-system-epsilon options are used for
+ comparing floating point values.
+ By default, strict equality is used. Use -p or -d to
+ set specific tolerance.
Modes of output:
-
Default mode: print the number of differences found and where they occured
-r Report mode: print the above plus the differences
-v Verbose mode: print the above plus a list of objects and warnings
-q Quiet mode: do not print output
Compare criteria
-
- If no objects [obj1[obj2]] are specified, h5diff only compares objects
- with the same absolute path in both files
+ If no objects [obj1[obj2]] are specified, h5diff only compares objects
+ with the same absolute path in both files
The compare criteria is:
- 1) datasets: numerical array differences 2) groups: name string difference
- 3) datatypes: the return value of H5Tequal 4) links: name string difference
- of the linked value
+ 1) datasets: numerical array differences
+ 2) groups: name string difference
+ 3) datatypes: the return value of H5Tequal
+ 4) links: name string difference of the linked value as default
+ (refer to --follow-links option).
- Return exit code:
-
- 1 if differences found, 0 if no differences, 2 if error
+ Exit code:
+ 0 if no differences, 1 if differences found, 2 if error
Examples of use:
-
1) h5diff file1 file2 /g1/dset1 /g1/dset2
-
Compares object '/g1/dset1' in file1 with '/g1/dset2' in file2
2) h5diff file1 file2 /g1/dset1
-
Compares object '/g1/dset1' in both files
3) h5diff file1 file2
-
Compares all objects in both files
- Note) file1 and file2 can be the same file. Use
-
- h5diff file1 file1 /g1/dset1 /g1/dset2
-
- to compare '/g1/dset1' and '/g1/dset2' in the same file
+ Notes:
+ file1 and file2 can be the same file.
+ Use h5diff file1 file1 /g1/dset1 /g1/dset2 to compare
+ '/g1/dset1' and '/g1/dset2' in the same file
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_624.txt b/tools/h5diff/testfiles/h5diff_624.txt
index d646a25..dc7c83b 100644
--- a/tools/h5diff/testfiles/h5diff_624.txt
+++ b/tools/h5diff/testfiles/h5diff_624.txt
@@ -4,64 +4,99 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[obj2]]
file2 File name of the second HDF5 file
[obj1] Name of an HDF5 object, in absolute path
[obj2] Name of an HDF5 object, in absolute path
+
OPTIONS
- -h, --help Print a usage message and exit
- -V, --version Print version number and exit
- -r, --report Report mode. Print differences
- -v, --verbose Verbose mode. Print differences, list of objects
- -q, --quiet Quiet mode. Do not do output
- -l, --link-follow Follow link(s)
+ -h, --help Print a usage message and exit.
+ -V, --version Print version number and exit.
+ -r, --report Report mode. Print differences.
+ -v, --verbose Verbose mode. Print differences, list of objects.
+ -q, --quiet Quiet mode. Do not produce output.
+ --follow-links Follow symbolic links (soft links and external links)
+ and compare the links' target objects.
+ If symbolic link(s) with the same name exist in the
+ files being compared, then determine whether the
+ target of each link is an existing object (dataset,
+ group, or named datatype) or the link is a dangling
+ link (a soft or external link pointing to a target
+ object that does not yet exist).
+ - If both symbolic links are dangling links, they
+ are treated as being the same; by default, h5diff
+ returns an exit code of 0. If, however,
+ --no-dangling-links is used with --follow-links,
+ this situation is treated as an error and h5diff
+ returns an exit code of 2.
+ - If only one of the two links is a dangling link,
+ they are treated as being different and h5diff
+ returns an exit code of 1. If, however,
+ --no-dangling-links is used with --follow-links,
+ this situation is treated as an error and h5diff
+ returns an exit code of 2.
+ - If both symbolic links point to existing objects,
+ h5diff compares the two objects.
+ If any symbolic link specified in the call to h5diff
+ does not exist, h5diff treats it as an error and
+ returns an exit code of 2.
+ --no-dangling-links Must be used with --follow-links option;
+ otherwise, h5diff shows error message and returns
+ an exit code of 2.
+ Check for any symbolic links (soft links or external
+ links) that do not resolve to an existing object
+ (dataset, group, or named datatype). If any
+ dangling link is found, this situation is treated as
+ an error and h5diff returns an exit code of 2.
-c, --compare List objects that are not comparable
-N, --nan Avoid NaNs detection
- -n C, --count=C Print differences up to C number, C is a positive integer.
- -d D, --delta=D Print difference if (|a-b| > D), D is a positive number.
- -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive number.
+ -n C, --count=C Print differences up to C number, C is a positive
+ integer.
+ -d D, --delta=D Print difference if (|a-b| > D), D is a positive
+ number.
+ -p R, --relative=R Print difference if (|(a-b)/b| > R), R is a positive
+ number.
--use-system-epsilon Print difference if (|a-b| > EPSILON),
- where EPSILON (FLT_EPSILON or FLT_EPSILON) is the system epsilon value.
- If the system epsilon is not defined, use the value below:
+ where EPSILON (FLT_EPSILON or FLT_EPSILON) is the
+ system epsilon value.
+ If the system epsilon is not defined, use the value
+ below:
FLT_EPSILON = 1.19209E-07 for float
DBL_EPSILON = 2.22045E-16 for double
- -d, -p, and --use-system-epsilon options are used for comparing floating point values.
- By default, strict equality is used. Use -p or -d to set specific tolerance.
+ -d, -p, and --use-system-epsilon options are used for
+ comparing floating point values.
+ By default, strict equality is used. Use -p or -d to
+ set specific tolerance.
Modes of output:
-
Default mode: print the number of differences found and where they occured
-r Report mode: print the above plus the differences
-v Verbose mode: print the above plus a list of objects and warnings
-q Quiet mode: do not print output
Compare criteria
-
- If no objects [obj1[obj2]] are specified, h5diff only compares objects
- with the same absolute path in both files
+ If no objects [obj1[obj2]] are specified, h5diff only compares objects
+ with the same absolute path in both files
The compare criteria is:
- 1) datasets: numerical array differences 2) groups: name string difference
- 3) datatypes: the return value of H5Tequal 4) links: name string difference
- of the linked value
+ 1) datasets: numerical array differences
+ 2) groups: name string difference
+ 3) datatypes: the return value of H5Tequal
+ 4) links: name string difference of the linked value as default
+ (refer to --follow-links option).
- Return exit code:
-
- 1 if differences found, 0 if no differences, 2 if error
+ Exit code:
+ 0 if no differences, 1 if differences found, 2 if error
Examples of use:
-
1) h5diff file1 file2 /g1/dset1 /g1/dset2
-
Compares object '/g1/dset1' in file1 with '/g1/dset2' in file2
2) h5diff file1 file2 /g1/dset1
-
Compares object '/g1/dset1' in both files
3) h5diff file1 file2
-
Compares all objects in both files
- Note) file1 and file2 can be the same file. Use
-
- h5diff file1 file1 /g1/dset1 /g1/dset2
-
- to compare '/g1/dset1' and '/g1/dset2' in the same file
+ Notes:
+ file1 and file2 can be the same file.
+ Use h5diff file1 file1 /g1/dset1 /g1/dset2 to compare
+ '/g1/dset1' and '/g1/dset2' in the same file
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_625.txt b/tools/h5diff/testfiles/h5diff_625.txt
index 47a1364..3bc194a 100644
--- a/tools/h5diff/testfiles/h5diff_625.txt
+++ b/tools/h5diff/testfiles/h5diff_625.txt
@@ -1,2 +1,3 @@
dataset: </g1/dset3> and </g1/dset4>
2 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_626.txt b/tools/h5diff/testfiles/h5diff_626.txt
index be392ae..6494066 100644
--- a/tools/h5diff/testfiles/h5diff_626.txt
+++ b/tools/h5diff/testfiles/h5diff_626.txt
@@ -1,2 +1,3 @@
dataset: </g1/dset3> and </g1/dset4>
3 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_627.txt b/tools/h5diff/testfiles/h5diff_627.txt
index 554f2ed..db14532 100644
--- a/tools/h5diff/testfiles/h5diff_627.txt
+++ b/tools/h5diff/testfiles/h5diff_627.txt
@@ -1,2 +1,3 @@
dataset: </g1/dset3> and </g1/dset4>
6 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_628.txt b/tools/h5diff/testfiles/h5diff_628.txt
index 74decda..e11d8ee 100644
--- a/tools/h5diff/testfiles/h5diff_628.txt
+++ b/tools/h5diff/testfiles/h5diff_628.txt
@@ -1,2 +1,3 @@
dataset: </g1/dset3> and </g1/dset4>
1 differences found
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_629.txt b/tools/h5diff/testfiles/h5diff_629.txt
index 4e67f57..7b9b2d8 100644
--- a/tools/h5diff/testfiles/h5diff_629.txt
+++ b/tools/h5diff/testfiles/h5diff_629.txt
@@ -1 +1,2 @@
h5diff: <file1.h6>: unable to open file
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_70.txt b/tools/h5diff/testfiles/h5diff_70.txt
index 30dbefe..7abcddd 100644
--- a/tools/h5diff/testfiles/h5diff_70.txt
+++ b/tools/h5diff/testfiles/h5diff_70.txt
@@ -2029,3 +2029,4 @@ position float3D of </g1> float3D of </g1> difference
Some objects are not comparable
--------------------------------
Use -c for a list of objects.
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_80.txt b/tools/h5diff/testfiles/h5diff_80.txt
index 33090df..1c55b1a 100644
--- a/tools/h5diff/testfiles/h5diff_80.txt
+++ b/tools/h5diff/testfiles/h5diff_80.txt
@@ -878,3 +878,4 @@ point #4 (2,8) (1,7)
Some objects are not comparable
--------------------------------
Use -c for a list of objects.
+EXIT CODE: 1
diff --git a/tools/h5diff/testfiles/h5diff_90.txt b/tools/h5diff/testfiles/h5diff_90.txt
index e6bfa14..fb23843 100644
--- a/tools/h5diff/testfiles/h5diff_90.txt
+++ b/tools/h5diff/testfiles/h5diff_90.txt
@@ -53,3 +53,4 @@ Not comparable: </g2/dset9> or </g2/dset9> is an empty dataset
Some objects are not comparable
--------------------------------
Use -c for a list of objects.
+EXIT CODE: 0
diff --git a/tools/h5diff/testfiles/h5diff_danglelinks1.h5 b/tools/h5diff/testfiles/h5diff_danglelinks1.h5
new file mode 100644
index 0000000..8cbaac1
--- /dev/null
+++ b/tools/h5diff/testfiles/h5diff_danglelinks1.h5
Binary files differ
diff --git a/tools/h5diff/testfiles/h5diff_danglelinks2.h5 b/tools/h5diff/testfiles/h5diff_danglelinks2.h5
new file mode 100644
index 0000000..f634210
--- /dev/null
+++ b/tools/h5diff/testfiles/h5diff_danglelinks2.h5
Binary files differ
diff --git a/tools/h5diff/testh5diff.sh b/tools/h5diff/testh5diff.sh
index 9986585..d34931d 100755
--- a/tools/h5diff/testh5diff.sh
+++ b/tools/h5diff/testh5diff.sh
@@ -23,6 +23,11 @@
# Pedro Vicente Nunes:
# 10/25/2005: Added test #9
# 11/27/2006: Added test #10, #11
+# Jonathan Kim:
+# Improved to use single line
+# Improved to check exit code (only serial mode, not necessary for parallel)
+# Added test 400 - 425 (links with --follow-links option)
+# Added test 450 - 459 (dangling links)
###############################################################################
@@ -47,6 +52,8 @@ FILE15=h5diff_extlink_src.h5
FILE16=h5diff_extlink_trg.h5
FILE17=h5diff_ext2softlink_src.h5
FILE18=h5diff_ext2softlink_trg.h5
+DANGLE_LINK_FILE1=h5diff_danglelinks1.h5
+DANGLE_LINK_FILE2=h5diff_danglelinks2.h5
TESTNAME=h5diff
EXIT_SUCCESS=0
@@ -192,9 +199,9 @@ TOOLTEST() {
actual_err_sav=${actual_err}-sav
shift
if test -n "$pmode"; then
- RUNCMD=$RUNPARALLEL
+ RUNCMD=$RUNPARALLEL
else
- RUNCMD=$RUNSERIAL
+ RUNCMD=$RUNSERIAL
fi
# Run test.
@@ -206,32 +213,44 @@ TOOLTEST() {
cd $srcdir/testfiles
eval $RUNCMD $H5DIFF_BIN "$@"
) >$actual 2>$actual_err
+ EXIT_CODE=$?
# save actual and actual_err in case they are needed later.
cp $actual $actual_sav
STDOUT_FILTER $actual
cp $actual_err $actual_err_sav
STDERR_FILTER $actual_err
cat $actual_err >> $actual
+ # don't add exit code check in pmode, as it causes failure. (exit code
+ # is from mpirun not tool)
+ # if any problem occurs relate to an exit code, it will be caught in
+ # serial mode, so the test is fullfilled.
+ if test -z "$pmode"; then
+ echo "EXIT CODE: $EXIT_CODE" >> $actual
+ fi
if [ ! -f $expect ]; then
- # Create the expect file if it doesn't yet exist.
+ # Create the expect file if it doesn't yet exist.
echo " CREATED"
- cp $actual $expect
+ cp $actual $expect
elif $CMP $expect $actual; then
- echo " PASSED"
+ echo " PASSED"
elif test -z "$pmode"; then
- echo "*FAILED*"
- echo " Expected result ($expect) differs from actual result ($actual)"
- nerrors="`expr $nerrors + 1`"
- test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /'
+ echo "*FAILED*"
+ echo " Expected result ($expect) differs from actual result ($actual)"
+ nerrors="`expr $nerrors + 1`"
+ test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /'
else
- # parallel mode output are often of different ordering from serial
- # output. If the sorted expected and actual files compare the same,
- # it is safe to assume the actual output match the expected file.
- expect_sorted=expect_sorted
- actual_sorted=actual_sorted
- sort $expect -o $expect_sorted
- sort $actual -o $actual_sorted
+ # parallel mode output are often of different ordering from serial
+ # output. If the sorted expected and actual files compare the same,
+ # it is safe to assume the actual output match the expected file.
+ expect_sorted=expect_sorted
+ actual_sorted=actual_sorted
+ sort $expect -o $expect_sorted
+ sort $actual -o $actual_sorted
+ # remove "EXIT CODE:" line from expect file. test for exit code
+ # is done by serial mode.
+ grep -v "EXIT CODE:" $expect_sorted > $expect_sorted.noexit
+ mv $expect_sorted.noexit $expect_sorted
if $CMP $expect_sorted $actual_sorted; then
echo " PASSED"
else
@@ -265,6 +284,7 @@ SKIP() {
}
+
##############################################################################
# The tests
# To avoid the printing of the complete full path of the test file, that hides
@@ -536,134 +556,130 @@ TOOLTEST h5diff_206.txt -c $FILE2 $FILE2 g2/dset7 g2/dset8
TOOLTEST h5diff_207.txt -c $FILE2 $FILE2 g2/dset8 g2/dset9
# ##############################################################################
-# # Links compare without -l (link follow)
+# # Links compare without --follow-links nor --no-dangling-links
# ##############################################################################
# test for bug1749
TOOLTEST h5diff_300.txt -v $FILE12 $FILE12 /link_g1 /link_g2
# ##############################################################################
-# # Links compare with -l (link follow)
+# # Links compare with --follow-links Only
# ##############################################################################
# soft links file to file
-TOOLTEST h5diff_400.txt -l -v $FILE13 $FILE13
+TOOLTEST h5diff_400.txt --follow-links -v $FILE13 $FILE13
# softlink vs dset"
-TOOLTEST h5diff_401.txt -l -v $FILE13 $FILE13 /softlink_dset1_1 /target_dset2
-
+TOOLTEST h5diff_401.txt --follow-links -v $FILE13 $FILE13 /softlink_dset1_1 /target_dset2
# dset vs softlink"
-TOOLTEST h5diff_402.txt -l -v $FILE13 $FILE13 /target_dset2 /softlink_dset1_1
-
+TOOLTEST h5diff_402.txt --follow-links -v $FILE13 $FILE13 /target_dset2 /softlink_dset1_1
# softlink vs softlink"
-TOOLTEST h5diff_403.txt -l -v $FILE13 $FILE13 /softlink_dset1_1 /softlink_dset2
-
+TOOLTEST h5diff_403.txt --follow-links -v $FILE13 $FILE13 /softlink_dset1_1 /softlink_dset2
# extlink vs extlink (FILE)"
-if test -n "$pmode"; then
- # TODO: Skip below test due to hang in prarllel mode
- echo "Skip below test due to hang in prarllel mode"
- SKIP -l -v $FILE15 $FILE15
-else
- TOOLTEST h5diff_404.txt -l -v $FILE15 $FILE15
-fi
-
+TOOLTEST h5diff_404.txt --follow-links -v $FILE15 $FILE15
# extlink vs dset"
-TOOLTEST h5diff_405.txt -l -v $FILE15 $FILE16 /ext_link_dset1 /target_group2/x_dset
-
+TOOLTEST h5diff_405.txt --follow-links -v $FILE15 $FILE16 /ext_link_dset1 /target_group2/x_dset
# dset vs extlink"
-TOOLTEST h5diff_406.txt -l -v $FILE16 $FILE15 /target_group2/x_dset /ext_link_dset1
-
+TOOLTEST h5diff_406.txt --follow-links -v $FILE16 $FILE15 /target_group2/x_dset /ext_link_dset1
# extlink vs extlink"
-TOOLTEST h5diff_407.txt -l -v $FILE15 $FILE15 /ext_link_dset1 /ext_link_dset2
-
+TOOLTEST h5diff_407.txt --follow-links -v $FILE15 $FILE15 /ext_link_dset1 /ext_link_dset2
# softlink vs extlink"
-TOOLTEST h5diff_408.txt -l -v $FILE13 $FILE15 /softlink_dset1_1 /ext_link_dset2
-
+TOOLTEST h5diff_408.txt --follow-links -v $FILE13 $FILE15 /softlink_dset1_1 /ext_link_dset2
# extlink vs softlink "
-TOOLTEST h5diff_409.txt -l -v $FILE15 $FILE13 /ext_link_dset2 /softlink_dset1_1
-
+TOOLTEST h5diff_409.txt --follow-links -v $FILE15 $FILE13 /ext_link_dset2 /softlink_dset1_1
# linked_softlink vs linked_softlink (FILE)"
-TOOLTEST h5diff_410.txt -l -v $FILE14 $FILE14
-
+TOOLTEST h5diff_410.txt --follow-links -v $FILE14 $FILE14
# dset2 vs linked_softlink_dset1"
-TOOLTEST h5diff_411.txt -l -v $FILE14 $FILE14 /target_dset2 /softlink1_to_slink2
-
+TOOLTEST h5diff_411.txt --follow-links -v $FILE14 $FILE14 /target_dset2 /softlink1_to_slink2
# linked_softlink_dset1 vs dset2"
-TOOLTEST h5diff_412.txt -l -v $FILE14 $FILE14 /softlink1_to_slink2 /target_dset2
-
+TOOLTEST h5diff_412.txt --follow-links -v $FILE14 $FILE14 /softlink1_to_slink2 /target_dset2
# linked_softlink_to_dset1 vs linked_softlink_to_dset2"
-TOOLTEST h5diff_413.txt -l -v $FILE14 $FILE14 /softlink1_to_slink2 /softlink2_to_slink2
-
+TOOLTEST h5diff_413.txt --follow-links -v $FILE14 $FILE14 /softlink1_to_slink2 /softlink2_to_slink2
# group vs linked_softlink_group1"
-TOOLTEST h5diff_414.txt -l -v $FILE14 $FILE14 /target_group /softlink3_to_slink2
-
+TOOLTEST h5diff_414.txt --follow-links -v $FILE14 $FILE14 /target_group /softlink3_to_slink2
# linked_softlink_group1 vs group"
-TOOLTEST h5diff_415.txt -l -v $FILE14 $FILE14 /softlink3_to_slink2 /target_group
-
+TOOLTEST h5diff_415.txt --follow-links -v $FILE14 $FILE14 /softlink3_to_slink2 /target_group
# linked_softlink_to_group1 vs linked_softlink_to_group2"
-TOOLTEST h5diff_416.txt -l -v $FILE14 $FILE14 /softlink3_to_slink2 /softlink4_to_slink2
-
+TOOLTEST h5diff_416.txt --follow-links -v $FILE14 $FILE14 /softlink3_to_slink2 /softlink4_to_slink2
# non-exist-softlink vs softlink"
-TOOLTEST h5diff_417.txt -l -v $FILE13 $FILE13 /softlink_noexist /softlink_dset2
-
+TOOLTEST h5diff_417.txt --follow-links -v $FILE13 $FILE13 /softlink_noexist /softlink_dset2
# softlink vs non-exist-softlink"
-TOOLTEST h5diff_418.txt -l -v $FILE13 $FILE13 /softlink_dset2 /softlink_noexist
-
+TOOLTEST h5diff_418.txt --follow-links -v $FILE13 $FILE13 /softlink_dset2 /softlink_noexist
# non-exist-extlink_file vs extlink"
-if test -n "$pmode"; then
- # TODO: Skip below test due to hang in prarllel mode
- echo "Skip below test due to hang in prarllel mode"
- SKIP -l -v $FILE15 $FILE15 /ext_link_noexist2 /ext_link_dset2
-else
- TOOLTEST h5diff_419.txt -l -v $FILE15 $FILE15 /ext_link_noexist2 /ext_link_dset2
-fi
-
+TOOLTEST h5diff_419.txt --follow-links -v $FILE15 $FILE15 /ext_link_noexist2 /ext_link_dset2
# exlink vs non-exist-extlink_file"
-if test -n "$pmode"; then
- # TODO: Skip below test due to hang in prarllel mode
- echo "Skip below test due to hang in prarllel mode"
- SKIP -l -v $FILE15 $FILE15 /ext_link_dset2 /ext_link_noexist2
-else
- TOOLTEST h5diff_420.txt -l -v $FILE15 $FILE15 /ext_link_dset2 /ext_link_noexist2
-fi
-
+TOOLTEST h5diff_420.txt --follow-links -v $FILE15 $FILE15 /ext_link_dset2 /ext_link_noexist2
# extlink vs non-exist-extlink_obj"
-TOOLTEST h5diff_421.txt -l -v $FILE15 $FILE15 /ext_link_dset2 /ext_link_noexist1
-
+TOOLTEST h5diff_421.txt --follow-links -v $FILE15 $FILE15 /ext_link_dset2 /ext_link_noexist1
# non-exist-extlink_obj vs extlink"
-TOOLTEST h5diff_422.txt -l -v $FILE15 $FILE15 /ext_link_noexist1 /ext_link_dset2
-
+TOOLTEST h5diff_422.txt --follow-links -v $FILE15 $FILE15 /ext_link_noexist1 /ext_link_dset2
# extlink_to_softlink_to_dset1 vs dset2"
-TOOLTEST h5diff_423.txt -l -v $FILE17 $FILE18 /ext_link_to_slink1 /dset2
-
+TOOLTEST h5diff_423.txt --follow-links -v $FILE17 $FILE18 /ext_link_to_slink1 /dset2
# dset2 vs extlink_to_softlink_to_dset1"
-TOOLTEST h5diff_424.txt -l -v $FILE18 $FILE17 /dset2 /ext_link_to_slink1
-
+TOOLTEST h5diff_424.txt --follow-links -v $FILE18 $FILE17 /dset2 /ext_link_to_slink1
# extlink_to_softlink_to_dset1 vs extlink_to_softlink_to_dset2"
-TOOLTEST h5diff_425.txt -l -v $FILE17 $FILE17 /ext_link_to_slink1 /ext_link_to_slink2
+TOOLTEST h5diff_425.txt --follow-links -v $FILE17 $FILE17 /ext_link_to_slink1 /ext_link_to_slink2
+
+
+# ##############################################################################
+# # Dangling links compare (--follow-links and --no-dangling-links)
+# ##############################################################################
+# dangling links --follow-links (FILE to FILE)
+TOOLTEST h5diff_450.txt --follow-links -v $DANGLE_LINK_FILE1 $DANGLE_LINK_FILE2
+
+# dangling links --follow-links and --no-dangling-links (FILE to FILE)
+TOOLTEST h5diff_451.txt --follow-links -v --no-dangling-links $DANGLE_LINK_FILE1 $DANGLE_LINK_FILE2
+
+# try --no-dangling-links without --follow-links options
+if test -n "$pmode"; then
+ # Skip this. Investigate later why act differently in pmode.
+ SKIP --no-dangling-links $FILE13 $FILE13
+else
+ TOOLTEST h5diff_452.txt --no-dangling-links $FILE13 $FILE13
+fi
+
+# dangling link found for soft links (FILE to FILE)
+TOOLTEST h5diff_453.txt --follow-links -v --no-dangling-links $FILE13 $FILE13
+
+# dangling link found for soft links (obj to obj)
+TOOLTEST h5diff_454.txt --follow-links -v --no-dangling-links $FILE13 $FILE13 /softlink_dset2 /softlink_noexist
+
+# dangling link found for soft links (obj to obj) Both dangle links
+TOOLTEST h5diff_455.txt --follow-links -v --no-dangling-links $FILE13 $FILE13 /softlink_noexist /softlink_noexist
+
+# dangling link found for ext links (FILE to FILE)
+TOOLTEST h5diff_456.txt --follow-links -v --no-dangling-links $FILE15 $FILE15
+
+# dangling link found for ext links (obj to obj). target file exist
+TOOLTEST h5diff_457.txt --follow-links -v --no-dangling-links $FILE15 $FILE15 /ext_link_dset1 /ext_link_noexist1
+
+# dangling link found for ext links (obj to obj). target file NOT exist
+TOOLTEST h5diff_458.txt --follow-links -v --no-dangling-links $FILE15 $FILE15 /ext_link_dset1 /ext_link_noexist2
+# dangling link found for ext links (obj to obj). Both dangle links
+TOOLTEST h5diff_459.txt --follow-links -v --no-dangling-links $FILE15 $FILE15 /ext_link_noexist1 /ext_link_noexist2
# ##############################################################################
diff --git a/tools/lib/h5diff.c b/tools/lib/h5diff.c
index 26e769c..4129e33 100644
--- a/tools/lib/h5diff.c
+++ b/tools/lib/h5diff.c
@@ -27,24 +27,21 @@ typedef enum toolname_t {
/* this struct can be used to differntiate among tools if necessary */
typedef struct {
h5tool_toolname_t toolname;
- int mode;
+ int msg_mode;
} h5tool_opt_t;
-/* To return link's target info
+/* To return link info
* Functions:
- * H5tools_get_softlink_target_info()
- * H5tools_get_extlink_target_info()
+ * H5tools_get_link_info()
* Note: this may be move to h5tools code if used by other tools
*/
typedef struct {
- const char *buf; /* IN: must be allocated along with H5Lget_info[li.u.val_size] */
- H5O_type_t type; /* OUT: target type */
- const char *path; /* OUT: target name */
- int is_path_malloced; /* VAR: Set to TRUE if path is malloced, so can be freed by checking this later. Needed when ext-link's target is soft-link */
- const char *extfile; /* OUT: if external link, external filename */
- hid_t extfile_id; /* OUT: if external link, external file id */
- h5tool_opt_t opt; /* IN: options */
-} h5tool_link_trg_info_t;
+ H5O_type_t trg_type; /* OUT: target type */
+ const char *trg_path; /* OUT: target obj path. This must be freed
+ * when used with H5tools_get_link_info() */
+ H5L_info_t linfo; /* OUT: link info */
+ h5tool_opt_t opt; /* IN: options */
+} h5tool_link_info_t;
/*
* Debug printf macros. The prefix allows output filtering by test scripts.
*/
@@ -90,6 +87,21 @@ do_print_objname (const char *OBJ, const char *path1, const char *path2)
parallel_print("%-7s: <%s> and <%s>\n", OBJ, path1, path2);
}
+/*-------------------------------------------------------------------------
+ * Function: print_warn
+ *
+ * Purpose: check print warning condition.
+ * Return:
+ * 1 if verbose mode
+ * 0 if not verbos mode
+ * Programmer: Jonathan Kim
+ * Date: Feb 4, 2010
+ *-------------------------------------------------------------------------
+ */
+static int print_warn(diff_opt_t *options)
+{
+ return ((options->m_verbose))?1:0;
+}
#ifdef H5_HAVE_PARALLEL
@@ -108,9 +120,9 @@ do_print_objname (const char *OBJ, const char *path1, const char *path2)
*/
void phdiff_dismiss_workers(void)
{
- int i;
- for(i=1; i<g_nTasks; i++)
- MPI_Send(NULL, 0, MPI_BYTE, i, MPI_TAG_END, MPI_COMM_WORLD);
+ int i;
+ for(i=1; i<g_nTasks; i++)
+ MPI_Send(NULL, 0, MPI_BYTE, i, MPI_TAG_END, MPI_COMM_WORLD);
}
@@ -130,31 +142,29 @@ void phdiff_dismiss_workers(void)
*/
void print_manager_output(void)
{
- /* If there was something we buffered, let's print it now */
- if( (outBuffOffset>0) && g_Parallel)
- {
- printf("%s", outBuff);
-
- if(overflow_file)
- {
- int tmp;
-
- rewind(overflow_file);
- while((tmp = getc(overflow_file)) >= 0)
- putchar(tmp);
-
- fclose(overflow_file);
- overflow_file = NULL;
- }
-
- fflush(stdout);
- memset(outBuff, 0, OUTBUFF_SIZE);
- outBuffOffset = 0;
- }
- else if( (outBuffOffset>0) && !g_Parallel)
- {
- fprintf(stderr, "h5diff error: outBuffOffset>0, but we're not in parallel!\n");
- }
+ /* If there was something we buffered, let's print it now */
+ if( (outBuffOffset>0) && g_Parallel)
+ {
+ printf("%s", outBuff);
+
+ if(overflow_file)
+ {
+ int tmp;
+ rewind(overflow_file);
+ while((tmp = getc(overflow_file)) >= 0)
+ putchar(tmp);
+ fclose(overflow_file);
+ overflow_file = NULL;
+ }
+
+ fflush(stdout);
+ memset(outBuff, 0, OUTBUFF_SIZE);
+ outBuffOffset = 0;
+ }
+ else if( (outBuffOffset>0) && !g_Parallel)
+ {
+ fprintf(stderr, "h5diff error: outBuffOffset>0, but we're not in parallel!\n");
+ }
}
/*-------------------------------------------------------------------------
@@ -174,253 +184,147 @@ void print_manager_output(void)
static void print_incoming_data(void)
{
- char data[PRINT_DATA_MAX_SIZE+1];
- int incomingMessage;
- MPI_Status Status;
-
- do
- {
- MPI_Iprobe(MPI_ANY_SOURCE, MPI_TAG_PRINT_DATA, MPI_COMM_WORLD, &incomingMessage, &Status);
- if(incomingMessage)
- {
- memset(data, 0, PRINT_DATA_MAX_SIZE+1);
- MPI_Recv(data, PRINT_DATA_MAX_SIZE, MPI_CHAR, Status.MPI_SOURCE, MPI_TAG_PRINT_DATA, MPI_COMM_WORLD, &Status);
-
- printf("%s", data);
- }
- } while(incomingMessage);
+ char data[PRINT_DATA_MAX_SIZE+1];
+ int incomingMessage;
+ MPI_Status Status;
+
+ do
+ {
+ MPI_Iprobe(MPI_ANY_SOURCE, MPI_TAG_PRINT_DATA, MPI_COMM_WORLD, &incomingMessage, &Status);
+ if(incomingMessage)
+ {
+ memset(data, 0, PRINT_DATA_MAX_SIZE+1);
+ MPI_Recv(data, PRINT_DATA_MAX_SIZE, MPI_CHAR, Status.MPI_SOURCE, MPI_TAG_PRINT_DATA, MPI_COMM_WORLD, &Status);
+
+ printf("%s", data);
+ }
+ } while(incomingMessage);
}
#endif
/*-------------------------------------------------------------------------
- * Function: H5tools_get_softlink_target_info
+ * Function: H5tools_get_link_info
*
- * Purpose: Get target object's type and path from soft-link path
+ * Purpose: Get link (soft, external) info and its target object type
+ (dataset, group, named datatype) and path, if exist
*
* Patameters:
- * - [IN] fileid : soft-link file id
- * - [IN] linkpath : soft-link's source path
- * - [IN] h5li : soft-link's source H5L_info_t
- * - [OUT] trg_info: returning target info (refer to struct)
+ * - [IN] fileid : link file id
+ * - [IN] linkpath : link path
+ * - [OUT] h5li : link's info (H5L_info_t)
+ * - [OUT] link_info: returning target object info (h5tool_link_info_t)
*
- * Return:
- * Success - 1 and return data via trg_info struct
- * Fail - 0
+ * Return:
+ * 1 : Succed to get link info.
+ * 0 : Detected as a dangling link
+ * -1 : H5 API failed.
*
- * Note:
- * trg_info->buf must be allocated along with H5Lget_info[li.u.val_size]
- * before passing to this function.
+ * NOTE:
+ * link_info->trg_path must be freed out of this function
*
* Programmer: Jonathan Kim
*
- * Date: Jan 20, 2010
+ * Date: Feb 8, 2010
*-------------------------------------------------------------------------*/
-static int H5tools_get_softlink_target_info(hid_t file_id, const char * linkpath, H5L_info_t h5li, h5tool_link_trg_info_t *s_trg_info)
+static int H5tools_get_link_info(hid_t file_id, const char * linkpath, h5tool_link_info_t *link_info)
{
- H5O_type_t otype = H5O_TYPE_UNKNOWN;
- H5O_info_t oinfo;
- H5L_info_t linfo;
- int ret = 0; /* init to fail */
+ int Ret = -1; /* init to fail */
+ htri_t l_ret;
+ H5O_info_t trg_oinfo;
+ hid_t fapl;
+ hid_t lapl = H5P_DEFAULT;
+ /* init */
+ link_info->trg_type = H5O_TYPE_UNKNOWN;
- if((H5Lexists(file_id, linkpath, H5P_DEFAULT) <= 0))
+ if(H5Lget_info(file_id, linkpath, &(link_info->linfo), H5P_DEFAULT) < 0)
{
- parallel_print("error: \"%s\" doesn't exist \n",linkpath);
+ if(link_info->opt.msg_mode==1)
+ parallel_print("Warning: unable to get link info from <%s>\n",linkpath);
goto out;
}
- if(H5Lget_info(file_id, linkpath, &linfo, H5P_DEFAULT) < 0)
+ /* check if link name exist */
+ if((H5Lexists(file_id, linkpath, H5P_DEFAULT) <= 0))
{
- parallel_print("error: unable to get link info from \"%s\"\n",linkpath);
+ if(link_info->opt.msg_mode==1)
+ parallel_print("Warning: link <%s> doesn't exist \n",linkpath);
goto out;
}
- /* get target name for softlink */
- if(linfo.type == H5L_TYPE_SOFT)
- {
- /* s_trg_info->buf should be already allocated out of
- * this function and free when done */
- if(H5Lget_val(file_id, linkpath, s_trg_info->buf, h5li.u.val_size, H5P_DEFAULT) < 0)
- {
- parallel_print("error: unable to get link value from \"%s\"\n",s_trg_info->path);
- goto out;
- }
- /* target path */
- s_trg_info->path = s_trg_info->buf;
- }
- /* if obj is hard link, will still get the type */
- else if (linfo.type == H5L_TYPE_HARD)
- {
- s_trg_info->path = linkpath;
- }
-
- /*--------------------------------------------------------------
- * if link target or object exit, get type
- */
- if((H5Lexists(file_id, s_trg_info->path, H5P_DEFAULT) == TRUE))
- {
-
- if(H5Oget_info_by_name(file_id, s_trg_info->path, &oinfo, H5P_DEFAULT) < 0)
- {
- parallel_print("error: unable to get object information for \"%s\"\n", s_trg_info->path);
- goto out;
- }
-
- otype = oinfo.type;
-
-
- /* check unknown type */
- if (otype < H5O_TYPE_GROUP || otype >=H5O_TYPE_NTYPES)
- {
- parallel_print("<%s> is unknown type\n", s_trg_info->path);
- goto out;
- }
- }
- else
- {
- parallel_print("warn: link target \"%s\" doesn't exist \n", s_trg_info->path);
- }
-
- /* set target obj type to return */
- s_trg_info->type = otype;
-
- /* succeed */
- ret = 1;
-out:
- return ret;
-}
-
-/*-------------------------------------------------------------------------
- * Function: H5tools_get_extlink_target_info
- *
- * Purpose: Get target object's type, path, file_id and filename from
- * external-link
- *
- * Patameters:
- * - [IN] fileid : external-link source file-id
- * - [IN] linkpath : external-link source path
- * - [IN] h5li : external-link source H5L_info_t
- * - [OUT] trg_info : returning target info (refer to struct)
- *
- * Return:
- * Success - 1 and return data via trg_info struct
- * Fail - 0
- *
- * Note:
- * - trg_info->buf must be allocated along with H5Lget_info[li.u.val_size]
- * before passing to this function.
- * - if target is soft-link, trg_info->path will be malloced. so check if
- * trg_info->is_path_malloced==TRUE, then free trg_info->path along with freeing
- * trg_info->buf outside of this function.
- *
- * Programmer: Jonathan Kim
- *
- * Date: Jan 20, 2010
- *-------------------------------------------------------------------------*/
-static int H5tools_get_extlink_target_info(hid_t fileid, const char *linkpath, H5L_info_t h5li, h5tool_link_trg_info_t *trg_info)
-{
-
- hid_t extfile_id;
- const char *extlink_file;
- const char *extlink_path;
- h5tool_link_trg_info_t soft_trg_info;
- H5L_info_t slinfo;
- int ret=0; /* init to Fail */
+ /* trg_path must be freed out of this function when finished using */
+ link_info->trg_path = (char*)HDcalloc(link_info->linfo.u.val_size, sizeof(char));
+ HDassert(link_info->trg_path);
- /* init */
- HDmemset(&soft_trg_info, 0, sizeof(h5tool_link_trg_info_t));
- trg_info->type = H5O_TYPE_UNKNOWN;
-
- if(H5Lget_val(fileid, linkpath, trg_info->buf, h5li.u.val_size, H5P_DEFAULT) < 0)
+ /* get link value */
+ if(H5Lget_val(file_id, linkpath, link_info->trg_path, link_info->linfo.u.val_size, H5P_DEFAULT) < 0)
{
- parallel_print("error: unable to get link value from \"%s\"\n",linkpath);
+ if(link_info->opt.msg_mode==1)
+ parallel_print("Warning: unable to get link value from <%s>\n",linkpath);
goto out;
}
- /*---------------------------------------
- * get target filename and object path
+
+ /*-----------------------------------------------------
+ * if link type is external link use different lapl to
+ * follow object in other file
*/
- if(H5Lunpack_elink_val(trg_info->buf, h5li.u.val_size, NULL, &extlink_file, &extlink_path)<0)
+ if (link_info->linfo.type == H5L_TYPE_EXTERNAL)
{
- parallel_print("error: unable to unpack external link value\n");
- goto out;
+ fapl = H5Pcreate(H5P_FILE_ACCESS);
+ H5Pset_fapl_sec2(fapl);
+ lapl = H5Pcreate(H5P_LINK_ACCESS);
+ H5Pset_elink_fapl(lapl, fapl);
}
- /* return target filename and obj path */
- trg_info->path = extlink_path;
- trg_info->extfile = extlink_file;
-
- /* ---------------------------------
- * get file id from external file
- * mimicked from h5diff() for Parallel code
- * , but not sure if it's needed
+ /*--------------------------------------------------------------
+ * if link's target object exist, get type
*/
- H5E_BEGIN_TRY
+ /* check if target object exist */
+ l_ret = H5Oexists_by_name(file_id, linkpath, lapl);
+
+ /* detect dangling link */
+ if(l_ret == FALSE)
{
- /* open file */
- if((extfile_id = h5tools_fopen(extlink_file, H5F_ACC_RDONLY, H5P_DEFAULT, NULL, NULL, (size_t)0)) < 0)
- {
- parallel_print("error: <%s>: unable to open file\n", extlink_file);
-#ifdef H5_HAVE_PARALLEL
- if(g_Parallel)
- /* Let tasks know that they won't be needed */
- phdiff_dismiss_workers();
-#endif
+ Ret = 0;
goto out;
- } /* end if */
- } H5E_END_TRY;
-
- /* get external file id */
- trg_info->extfile_id = extfile_id;
-
- /* --------------------------------------------------
- * check if target is soft link, if so allocate buffer
- */
- if((H5Lexists(trg_info->extfile_id, trg_info->path, H5P_DEFAULT) <= 0))
- {
- parallel_print("error: \"%s\" doesn't exist \n", trg_info->path);
- goto out;
}
- if(H5Lget_info(trg_info->extfile_id, trg_info->path, &slinfo, H5P_DEFAULT) < 0)
+ /* function failed */
+ else if (l_ret < 0)
{
- parallel_print("error: unable to get link info from \"%s\"\n", trg_info->path);
- goto out;
+ goto out;
}
- /* if ext-link's target is soft-link */
- if(slinfo.type == H5L_TYPE_SOFT)
+ /* get target object info */
+ if(H5Oget_info_by_name(file_id, linkpath, &trg_oinfo, lapl) < 0)
{
- size_t bufsize = (h5li.u.val_size > slinfo.u.val_size)?h5li.u.val_size:slinfo.u.val_size;
- soft_trg_info.buf = (char*)HDcalloc(bufsize, sizeof(char));
- HDassert(trg_info->path);
+ if(link_info->opt.msg_mode==1)
+ parallel_print("Warning: unable to get object information for <%s>\n", linkpath);
+ goto out;
}
- /* get target obj type */
- if(H5tools_get_softlink_target_info(trg_info->extfile_id, trg_info->path, h5li, &soft_trg_info)==0)
+ /* check unknown type */
+ if (trg_oinfo.type < H5O_TYPE_GROUP || trg_oinfo.type >=H5O_TYPE_NTYPES)
{
- parallel_print("error: unable to get link info from \"%s\"\n", trg_info->path);
+ if(link_info->opt.msg_mode==1)
+ parallel_print("Warning: target object of <%s> is unknown type\n", linkpath);
goto out;
- }
+ }
- /* target obj type */
- trg_info->type = soft_trg_info.type;
+ /* set target obj type to return */
+ link_info->trg_type = trg_oinfo.type;
- /* if ext-link's target is soft-link */
- if(slinfo.type == H5L_TYPE_SOFT)
+ /* succeed */
+ Ret = 1;
+out:
+ if (link_info->linfo.type == H5L_TYPE_EXTERNAL)
{
- trg_info->path = HDstrdup(soft_trg_info.buf);
- HDassert(trg_info->path);
- /* set TRUE so this can be freed later */
- trg_info->is_path_malloced = TRUE;
+ H5Pclose(fapl);
+ H5Pclose(lapl);
}
- /* Success */
- ret=1;
-out:
- if(soft_trg_info.buf)
- HDfree(soft_trg_info.buf);
-
- return ret;
+ return Ret;
}
+
/*-------------------------------------------------------------------------
* Function: h5diff
*
@@ -451,13 +355,6 @@ hsize_t h5diff(const char *fname1,
HDmemset(filenames, 0, 1024 * 2);
- if(options->m_quiet && (options->m_verbose || options->m_report))
- {
- parallel_print("Error: -q (quiet mode) cannot be added to verbose or report modes\n");
- options->err_stat=1;
- return 0;
- } /* end if */
-
/*-------------------------------------------------------------------------
* open the files first; if they are not valid, no point in continuing
*-------------------------------------------------------------------------
@@ -468,7 +365,7 @@ hsize_t h5diff(const char *fname1,
{
/* open file 1 */
- if((file1_id = h5tools_fopen(fname1, H5F_ACC_RDONLY, H5P_DEFAULT, NULL, NULL, (size_t)0)) < 0)
+ if((file1_id = h5tools_fopen(fname1, H5F_ACC_RDONLY, H5P_DEFAULT, NULL, NULL, (size_t)0)) < 0)
{
parallel_print("h5diff: <%s>: unable to open file\n", fname1);
@@ -484,8 +381,8 @@ hsize_t h5diff(const char *fname1,
/* open file 2 */
-
- if((file2_id = h5tools_fopen(fname2, H5F_ACC_RDONLY, H5P_DEFAULT, NULL, NULL, (size_t)0)) < 0)
+
+ if((file2_id = h5tools_fopen(fname2, H5F_ACC_RDONLY, H5P_DEFAULT, NULL, NULL, (size_t)0)) < 0)
{
parallel_print("h5diff: <%s>: unable to open file\n", fname2);
@@ -546,12 +443,10 @@ hsize_t h5diff(const char *fname1,
info2,
options);
} /* end if */
-
/*-------------------------------------------------------------------------
* compare all
*-------------------------------------------------------------------------
*/
-
else
{
#ifdef H5_HAVE_PARALLEL
@@ -715,14 +610,14 @@ hsize_t diff_match(hid_t file1_id,
* 2) the graph must match, i.e same names (absolute path)
* 3) objects with the same name must be of the same type
*-------------------------------------------------------------------------
- */
-
+ */
+
/* number of different objects */
if ( info1->nused != info2->nused )
{
options->contents = 0;
}
-
+
/* objects in one file and not the other */
for( i = 0; i < table->nobjs; i++)
{
@@ -733,7 +628,7 @@ hsize_t diff_match(hid_t file1_id,
}
/* objects with the same name but different HDF5 types */
- for( i = 0; i < table->nobjs; i++)
+ for( i = 0; i < table->nobjs; i++)
{
if ( table->objs[i].flags[0] && table->objs[i].flags[1] )
{
@@ -751,8 +646,8 @@ hsize_t diff_match(hid_t file1_id,
*-------------------------------------------------------------------------
*/
#ifdef H5_HAVE_PARALLEL
-{
- char *workerTasks = HDmalloc((g_nTasks - 1) * sizeof(char));
+ {
+ char *workerTasks = (char*)HDmalloc((g_nTasks - 1) * sizeof(char));
int n;
int busyTasks = 0;
struct diffs_found nFoundbyWorker;
@@ -1043,7 +938,7 @@ hsize_t diff_match(hid_t file1_id,
h5diffdebug("done with if block\n");
free(workerTasks);
-}
+ }
#endif /* H5_HAVE_PARALLEL */
/* free table */
@@ -1061,9 +956,10 @@ hsize_t diff_match(hid_t file1_id,
* Return: Number of differences found
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
- *
* Date: May 9, 2003
*
+ * Programmer: Jonathan Kim
+ * - add following links feature (Feb 11,2010)
*-------------------------------------------------------------------------
*/
@@ -1081,30 +977,20 @@ hsize_t diff_compare(hid_t file1_id,
int f2 = 0;
hsize_t nfound = 0;
ssize_t i,j;
+ int l_ret;
+ int is_dangle_link1 = 0;
+ int is_dangle_link2 = 0;
/* local variables for diff() */
- hid_t l_fileid1=file1_id;
- hid_t l_fileid2=file2_id;
h5trav_type_t obj1type, obj2type;
- const char *obj1name, *obj2name;
-
- /* softlink info to get target name and type */
- h5tool_link_trg_info_t softlinkinfo1;
- h5tool_link_trg_info_t softlinkinfo2;
- /* external link file id */
- hid_t extfile1_id = (-1);
- hid_t extfile2_id = (-1);
- h5tool_link_trg_info_t extlinkinfo1;
- h5tool_link_trg_info_t extlinkinfo2;
+ /* to get link info */
+ h5tool_link_info_t linkinfo1;
+ h5tool_link_info_t linkinfo2;
- /* init softlink info */
- HDmemset(&softlinkinfo1, 0, sizeof(h5tool_link_trg_info_t));
- HDmemset(&softlinkinfo2, 0, sizeof(h5tool_link_trg_info_t));
-
- /* init external link info */
- HDmemset(&extlinkinfo1, 0, sizeof(h5tool_link_trg_info_t));
- HDmemset(&extlinkinfo2, 0, sizeof(h5tool_link_trg_info_t));
+ /* init link info struct */
+ HDmemset(&linkinfo1, 0, sizeof(h5tool_link_info_t));
+ HDmemset(&linkinfo2, 0, sizeof(h5tool_link_info_t));
i = h5trav_getindex (info1, obj1_name);
j = h5trav_getindex (info2, obj2_name);
@@ -1128,206 +1014,220 @@ hsize_t diff_compare(hid_t file1_id,
}
/* use the name with "/" first, as obtained by iterator function */
- obj1name = info1->paths[i].path;
- obj2name = info2->paths[j].path;
+ obj1_name = info1->paths[i].path;
+ obj2_name = info2->paths[j].path;
obj1type = info1->paths[i].type;
obj2type = info2->paths[j].type;
/*-----------------------------------------------------------------
- * follow link option, compare with target object
+ * follow link option, compare with target object
*/
- if (options->linkfollow)
+ if (options->follow_links)
{
- H5L_info_t li1, li2;
+ /* pass how to handle printing warning to linkinfo option */
+ if(print_warn(options))
+ linkinfo1.opt.msg_mode = linkinfo2.opt.msg_mode = 1;
/*------------------------------------------------------------
* Soft links
*------------------------------------------------------------*/
- /*------------------------
- * if object1 softlink
- */
+ /*--------------------------
+ * if object1 soft link */
if (obj1type == H5TRAV_TYPE_LINK)
{
- if(H5Lget_info(file1_id, obj1_name, &li1, H5P_DEFAULT) < 0)
+ /* get type of target object */
+ l_ret = H5tools_get_link_info(file1_id, obj1_name, &linkinfo1);
+ /* dangling link */
+ if (l_ret == 0)
{
- parallel_print("error: unable to get link info from \"%s\"\n",obj1_name);
- goto out;
+ if (options->no_dangle_links)
+ {
+ /* gangling link is error */
+ if(options->m_verbose)
+ parallel_print("Warning: <%s> is a dangling link.\n", obj1_name);
+ options->err_stat = 1;
+ goto out;
+ }
+ else
+ is_dangle_link1 = 1;
}
-
- softlinkinfo1.buf = (char*)HDcalloc(li1.u.val_size, sizeof(char));
- HDassert(softlinkinfo1.buf);
-
- /* get type and name of target object */
- if(H5tools_get_softlink_target_info(file1_id, obj1_name, li1, &softlinkinfo1)==0)
+ /* fail */
+ else if(l_ret < 0)
{
- parallel_print("error: unable to get softlink info from \"%s\"\n",obj1_name);
+ options->err_stat = 1;
goto out;
}
-
- /* set target name and type to pass diff() */
- obj1type = softlinkinfo1.type;
- obj1name = softlinkinfo1.path;
+ else /* OK */
+ {
+ /* target type for diff() */
+ obj1type = linkinfo1.trg_type;
+ }
}
-
- /*------------------------
- * if object2 is softlink
- */
+
+ /*-----------------------------
+ * if object2 is soft link */
if (obj2type == H5TRAV_TYPE_LINK)
{
- if(H5Lget_info(file2_id, obj2_name, &li2, H5P_DEFAULT) < 0)
+ /* get type target object */
+ l_ret = H5tools_get_link_info(file2_id, obj2_name, &linkinfo2);
+ /* dangling link */
+ if (l_ret == 0)
{
- parallel_print("error: unable to get link info from \"%s\"\n",obj2_name);
- goto out;
+ if (options->no_dangle_links)
+ {
+ /* gangling link is error */
+ if(options->m_verbose)
+ parallel_print("Warning: <%s> is a dangling link.\n", obj2_name);
+ options->err_stat = 1;
+ goto out;
+ }
+ else
+ is_dangle_link2=1;
}
-
-
- softlinkinfo2.buf = (char*)HDcalloc(li2.u.val_size, sizeof(char));
- HDassert(softlinkinfo2.buf);
-
- /* get type and name of target object */
- if(H5tools_get_softlink_target_info(file2_id, obj2_name, li2, &softlinkinfo2)==0)
+ /* fail */
+ else if(l_ret < 0)
{
- parallel_print("error: unable to get softlink info from \"%s\"\n",obj2_name);
+ options->err_stat = 1;
goto out;
}
-
- /* set target name and type to pass diff() */
- obj2type = softlinkinfo2.type;
- obj2name = softlinkinfo2.path;
+ else /* OK */
+ {
+ /* target type for diff() */
+ obj2type = linkinfo2.trg_type;
+ }
}
/*------------------------------------------------------------
* External links
*------------------------------------------------------------*/
- /*-------------------------------
- * if object1 is external link
- */
+ /*--------------------------------
+ * if object1 is external link */
if (obj1type == H5TRAV_TYPE_UDLINK)
{
- if(H5Lget_info(file1_id, obj1_name, &li1, H5P_DEFAULT) < 0)
- {
- parallel_print("error: unable to get link info from \"%s\"\n",obj1_name);
- goto out;
- }
-
- /* for external link */
- if(li1.type == H5L_TYPE_EXTERNAL)
+ /* get type and name of target object */
+ l_ret = H5tools_get_link_info(file1_id, obj1_name, &linkinfo1);
+ /* dangling link */
+ if (l_ret == 0)
{
- extlinkinfo1.buf = (char*)HDcalloc(li1.u.val_size, sizeof(char));
- HDassert(extlinkinfo1.buf);
-
- /* get type and name of target object */
- if(H5tools_get_extlink_target_info(file1_id, obj1_name, li1, &extlinkinfo1)==0)
+ if (options->no_dangle_links)
{
- parallel_print("error: unable to get external link info from \"%s\"\n",obj1_name);
+ /* gangling link is error */
+ if(options->m_verbose)
+ parallel_print("Warning: <%s> is a dangling link.\n", obj1_name);
+ options->err_stat = 1;
goto out;
}
-
- /* if valid actual object */
- if (extlinkinfo1.type < H5O_TYPE_GROUP || extlinkinfo1.type >= H5O_TYPE_NTYPES)
- {
- if (options->m_verbose)
- {
- parallel_print("<%s> is invaild type\n", obj1_name);
- }
- goto out;
- }
-
- /* set target fileid, name and type to pass diff() */
- l_fileid1 = extlinkinfo1.extfile_id;
- obj1name = extlinkinfo1.path;
- obj1type = extlinkinfo1.type;
+ else
+ is_dangle_link1 = 1;
}
- }
-
- /*-------------------------------
- * if object2 is external link
- */
- if (obj2type == H5TRAV_TYPE_UDLINK)
- {
- if(H5Lget_info(file2_id, obj2_name, &li2, H5P_DEFAULT) < 0)
+ /* fail */
+ else if(l_ret < 0)
{
- parallel_print("error: unable to get link info from \"%s\"\n",obj2_name);
+ options->err_stat = 1;
goto out;
}
- /* for external link */
- if(li2.type == H5L_TYPE_EXTERNAL)
+ else /* OK */
{
- extlinkinfo2.buf = (char*)HDcalloc(li2.u.val_size, sizeof(char));
- HDassert(extlinkinfo2.buf);
+ /* for external link */
+ if(linkinfo1.linfo.type == H5L_TYPE_EXTERNAL)
+ obj1type = linkinfo1.trg_type;
+ }
+ }
- /* get type and name of target object */
- if(H5tools_get_extlink_target_info(file2_id, obj2_name, li2, &extlinkinfo2)==0)
- {
- parallel_print("error: unable to get external link info from \"%s\"\n",obj2_name);
- goto out;
- }
- /* if valid actual object */
- if (extlinkinfo2.type < H5O_TYPE_GROUP || extlinkinfo2.type >= H5O_TYPE_NTYPES)
+ /*--------------------------------
+ * if object2 is external link */
+ if (obj2type == H5TRAV_TYPE_UDLINK)
+ {
+ /* get type and name of target object */
+ l_ret = H5tools_get_link_info(file2_id, obj2_name, &linkinfo2);
+ /* dangling link */
+ if (l_ret == 0)
+ {
+ if (options->no_dangle_links)
{
- if (options->m_verbose)
- {
- parallel_print("<%s> is invaild type\n", obj2_name);
- }
+ /* gangling link is error */
+ if(options->m_verbose)
+ parallel_print("Warning: <%s> is a dangling link.\n", obj2_name);
+ options->err_stat = 1;
goto out;
}
-
- /* set target fileid, name and type to pass diff() */
- l_fileid2 = extlinkinfo2.extfile_id;
- obj2name = extlinkinfo2.path;
- obj2type = extlinkinfo2.type;
+ else
+ is_dangle_link2 = 1;
+ }
+ /* fail */
+ else if(l_ret < 0)
+ {
+ options->err_stat = 1;
+ goto out;
+ }
+ else /* OK */
+ {
+ /* for external link */
+ if(linkinfo2.linfo.type == H5L_TYPE_EXTERNAL)
+ obj2type = linkinfo2.trg_type;
}
}
- } /* end of linkfollow */
-
+ /* found dangling link */
+ if (is_dangle_link1 || is_dangle_link2)
+ goto out;
+ } /* end of follow_links */
+
/* objects are not the same type */
if (obj1type != obj2type)
{
if (options->m_verbose||options->m_list_not_cmp)
{
parallel_print("<%s> is of type %s and <%s> is of type %s\n",
- obj1name, get_type(obj1type), obj2name,
- get_type(obj2type));
+ obj1_name, get_type(obj1type),
+ obj2_name, get_type(obj2type));
}
options->not_cmp=1;
goto out;
}
- nfound = diff(l_fileid1, obj1name,
- l_fileid2, obj2name,
+ nfound = diff(file1_id, obj1_name,
+ file2_id, obj2_name,
options, obj1type);
out:
- /* free soft link buffer */
- if (softlinkinfo1.buf)
- HDfree(softlinkinfo1.buf);
- if (softlinkinfo2.buf)
- HDfree(softlinkinfo2.buf);
- /* free external link buffer */
- if (extlinkinfo1.buf);
+ /*-------------------------------
+ * handle dangling link(s) */
+ /* both obj1 and obj2 are dangling links */
+ if(is_dangle_link1 && is_dangle_link2)
{
- HDfree(extlinkinfo1.buf);
- /* case for ext-link's target is soft-link */
- if(extlinkinfo1.is_path_malloced)
- HDfree(extlinkinfo1.path);
+ if(print_objname(options, nfound))
+ {
+ do_print_objname("dangling link", obj1_name, obj2_name);
+ print_found(nfound);
+ }
}
- if (extlinkinfo2.buf);
+ /* obj1 is dangling link */
+ else if (is_dangle_link1)
{
- HDfree(extlinkinfo2.buf);
- /* case for ext-link's target is soft-link */
- if(extlinkinfo2.is_path_malloced)
- HDfree(extlinkinfo2.path);
+ if(options->m_verbose)
+ parallel_print("obj1 <%s> is a dangling link.\n", obj1_name);
+ nfound++;
+ if(print_objname(options, nfound))
+ print_found(nfound);
}
-
- /* close external file */
- H5E_BEGIN_TRY
+ /* obj2 is dangling link */
+ else if (is_dangle_link2)
{
- H5Fclose(extfile1_id);
- H5Fclose(extfile2_id);
- } H5E_END_TRY;
+ if(options->m_verbose)
+ parallel_print("obj2 <%s> is a dangling link.\n", obj2_name);
+ nfound++;
+ if(print_objname(options, nfound))
+ print_found(nfound);
+ }
+
+ /* free link info buffer */
+ if (linkinfo1.trg_path)
+ HDfree(linkinfo1.trg_path);
+ if (linkinfo2.trg_path)
+ HDfree(linkinfo2.trg_path);
return nfound;
}
@@ -1346,9 +1246,10 @@ out:
* Return: Number of differences found
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
- *
* Date: May 9, 2003
*
+ * Programmer: Jonathan Kim
+ * - add following links feature (Feb 11,2010)
*-------------------------------------------------------------------------
*/
@@ -1364,24 +1265,28 @@ hsize_t diff(hid_t file1_id,
hid_t grp1_id = (-1);
hid_t grp2_id = (-1);
int ret;
+ int is_dangle_link1 = 0;
+ int is_dangle_link2 = 0;
hsize_t nfound = 0;
- char *extlinkbuf1=NULL;
- char *extlinkbuf2=NULL;
- /* used in soft link case (H5TRAV_TYPE_LINK) */
- h5tool_link_trg_info_t softlinkinfo1;
- h5tool_link_trg_info_t softlinkinfo2;
- /*init */
- HDmemset(&softlinkinfo1,0,sizeof(h5tool_link_trg_info_t));
- HDmemset(&softlinkinfo2,0,sizeof(h5tool_link_trg_info_t));
+ /* to get link info */
+ h5tool_link_info_t linkinfo1;
+ h5tool_link_info_t linkinfo2;
+
+ /*init link info struct */
+ HDmemset(&linkinfo1,0,sizeof(h5tool_link_info_t));
+ HDmemset(&linkinfo2,0,sizeof(h5tool_link_info_t));
+ /* pass how to handle printing warnings to linkinfo option */
+ if(print_warn(options))
+ linkinfo1.opt.msg_mode = linkinfo2.opt.msg_mode = 1;
switch(type)
{
- /*-------------------------------------------------------------------------
+ /*----------------------------------------------------------------------
* H5TRAV_TYPE_DATASET
- *-------------------------------------------------------------------------
+ *----------------------------------------------------------------------
*/
case H5TRAV_TYPE_DATASET:
/* verbose (-v) and report (-r) mode */
@@ -1404,14 +1309,14 @@ hsize_t diff(hid_t file1_id,
if (!options->not_cmp && nfound)
{
do_print_objname("dataset", path1, path2);
- print_found(nfound);
+ print_found(nfound);
}
}
break;
- /*-------------------------------------------------------------------------
+ /*----------------------------------------------------------------------
* H5TRAV_TYPE_NAMED_DATATYPE
- *-------------------------------------------------------------------------
+ *----------------------------------------------------------------------
*/
case H5TRAV_TYPE_NAMED_DATATYPE:
if((type1_id = H5Topen2(file1_id, path1, H5P_DEFAULT)) < 0)
@@ -1432,10 +1337,11 @@ hsize_t diff(hid_t file1_id,
if(options->m_verbose)
print_found(nfound);
- /*-------------------------------------------------------------------------
+ /*-----------------------------------------------------------------
* compare attributes
- * the if condition refers to cases when the dataset is a referenced object
- *-------------------------------------------------------------------------
+ * the if condition refers to cases when the dataset is a
+ * referenced object
+ *-----------------------------------------------------------------
*/
if(path1)
nfound += diff_attr(type1_id, type2_id, path1, path2, options);
@@ -1446,9 +1352,9 @@ hsize_t diff(hid_t file1_id,
goto out;
break;
- /*-------------------------------------------------------------------------
+ /*----------------------------------------------------------------------
* H5TRAV_TYPE_GROUP
- *-------------------------------------------------------------------------
+ *----------------------------------------------------------------------
*/
case H5TRAV_TYPE_GROUP:
ret = HDstrcmp(path1, path2);
@@ -1468,10 +1374,11 @@ hsize_t diff(hid_t file1_id,
if((grp2_id = H5Gopen2(file2_id, path2, H5P_DEFAULT)) < 0)
goto out;
- /*-------------------------------------------------------------------------
+ /*-----------------------------------------------------------------
* compare attributes
- * the if condition refers to cases when the dataset is a referenced object
- *-------------------------------------------------------------------------
+ * the if condition refers to cases when the dataset is a
+ * referenced object
+ *-----------------------------------------------------------------
*/
if(path1)
nfound += diff_attr(grp1_id, grp2_id, path1, path2, options);
@@ -1483,42 +1390,54 @@ hsize_t diff(hid_t file1_id,
break;
- /*-------------------------------------------------------------------------
+ /*----------------------------------------------------------------------
* H5TRAV_TYPE_LINK
- *-------------------------------------------------------------------------
+ *----------------------------------------------------------------------
*/
case H5TRAV_TYPE_LINK:
{
- H5L_info_t li1, li2;
-
- if(H5Lget_info(file1_id, path1, &li1, H5P_DEFAULT) < 0)
+ /* get type and name of target object */
+ ret = H5tools_get_link_info(file1_id, path1, &linkinfo1);
+ /* dangling link */
+ if (ret == 0)
{
- parallel_print("error: unable to get link info from \"%s\"\n", path1);
- goto out;
+ if (options->no_dangle_links)
+ {
+ /* gangling link is error */
+ if(options->m_verbose)
+ parallel_print("Warning: <%s> is a dangling link.\n", path1);
+ goto out;
+ }
+ else
+ is_dangle_link1 = 1;
}
- if(H5Lget_info(file2_id, path2, &li2, H5P_DEFAULT) < 0)
- {
- parallel_print("error: unable to get link info from \"%s\"\n", path2);
+ else if (ret < 0)
goto out;
- }
-
- softlinkinfo1.buf = (char*)HDcalloc(li1.u.val_size, sizeof(char));
- HDassert(softlinkinfo1.buf);
- softlinkinfo2.buf = (char*)HDcalloc(li2.u.val_size, sizeof(char));
- HDassert(softlinkinfo2.buf);
- if(H5tools_get_softlink_target_info(file1_id,path1,li1,&softlinkinfo1)==0)
+ /* get type and name of target object */
+ ret = H5tools_get_link_info(file2_id, path2, &linkinfo2);
+ /* dangling link */
+ if (ret == 0)
{
- parallel_print("error: unable to get softlink info from \"%s\"\n", path1);
- goto out;
+ if (options->no_dangle_links)
+ {
+ /* gangling link is error */
+ if(options->m_verbose)
+ parallel_print("Warning: <%s> is a dangling link.\n", path2);
+ goto out;
+ }
+ else
+ is_dangle_link2 = 1;
}
- if(H5tools_get_softlink_target_info(file2_id,path2,li2,&softlinkinfo2)==0)
- {
- parallel_print("error: unable to get softlink info from \"%s\"\n", path2);
+ else if (ret < 0)
goto out;
- }
+
- ret = HDstrcmp(softlinkinfo1.path, softlinkinfo2.path);
+ /* found dangling link */
+ if (is_dangle_link1 || is_dangle_link2)
+ goto out2;
+
+ ret = HDstrcmp(linkinfo1.trg_path, linkinfo2.trg_path);
/* if the target link name is not same then the links are "different" */
nfound = (ret != 0) ? 1 : 0;
@@ -1526,115 +1445,124 @@ hsize_t diff(hid_t file1_id,
if(print_objname(options, nfound))
do_print_objname("link", path1, path2);
- if (options->linkfollow)
+ if (options->follow_links)
{
/* objects are not the same type */
- if (softlinkinfo1.type != softlinkinfo2.type)
+ if (linkinfo1.trg_type != linkinfo2.trg_type)
{
if (options->m_verbose||options->m_list_not_cmp)
{
- parallel_print("<%s> is of type %d and <%s> is of type %d\n", softlinkinfo1.path, softlinkinfo1.type, softlinkinfo2.path, softlinkinfo2.type);
+ parallel_print("<%s> is of type %s and <%s> is of type %s\n", path1, get_type(linkinfo1.trg_type), path2, get_type(linkinfo2.trg_type));
}
options->not_cmp=1;
goto out;
}
- nfound += diff(file1_id, softlinkinfo1.path,
- file2_id, softlinkinfo2.path,
- options, softlinkinfo1.type);
+ /* call self to compare target object */
+ nfound += diff(file1_id, path1,
+ file2_id, path2,
+ options, linkinfo1.trg_type);
}
/* always print the number of differences found in verbose mode */
if(options->m_verbose)
print_found(nfound);
- HDfree(softlinkinfo1.buf);
- HDfree(softlinkinfo2.buf);
+ /* free link info buffer */
+ HDfree(linkinfo1.trg_path);
+ HDfree(linkinfo2.trg_path);
}
break;
- /*-------------------------------------------------------------------------
+ /*----------------------------------------------------------------------
* H5TRAV_TYPE_UDLINK
- *-------------------------------------------------------------------------
+ *----------------------------------------------------------------------
*/
case H5TRAV_TYPE_UDLINK:
{
- H5L_info_t li1, li2;
-
- if(H5Lget_info(file1_id, path1, &li1, H5P_DEFAULT) < 0)
+ /* get type and name of target object */
+ ret = H5tools_get_link_info(file1_id, path1, &linkinfo1);
+ /* dangling link */
+ if (ret == 0)
{
- parallel_print("error: unable to get udlink info from \"%s\"\n", path1);
- goto out;
+ if (options->no_dangle_links)
+ {
+ /* gangling link is error */
+ if(options->m_verbose)
+ parallel_print("Warning: <%s> is a dangling link.\n", path1);
+ goto out;
+ }
+ else
+ is_dangle_link1=1;
}
- if(H5Lget_info(file2_id, path2, &li2, H5P_DEFAULT) < 0)
- {
- parallel_print("error: unable to get udlink info from \"%s\"\n", path2);
+ else if (ret < 0)
goto out;
- }
- /* Only external links will have a query function registered */
- if(li1.type == H5L_TYPE_EXTERNAL && li2.type == H5L_TYPE_EXTERNAL)
+ /* get type and name of target object */
+ ret = H5tools_get_link_info(file2_id, path2, &linkinfo2);
+ /* dangling link */
+ if (ret == 0)
{
-
- extlinkbuf1 = (char*)HDcalloc(li1.u.val_size, sizeof(char));
- HDassert(extlinkbuf1);
- extlinkbuf2 = (char*)HDcalloc(li2.u.val_size, sizeof(char));
- HDassert(extlinkbuf2);
-
- if(H5Lget_val(file1_id, path1, extlinkbuf1, li1.u.val_size, H5P_DEFAULT) < 0)
- {
- parallel_print("error: unable to get link value from \"%s\"\n",path1);
- goto out;
- } /* end if */
- if(H5Lget_val(file2_id, path2, extlinkbuf2, li2.u.val_size, H5P_DEFAULT) < 0)
+ if (options->no_dangle_links)
{
- parallel_print("error: unable to get link value from \"%s\"\n",path2);
+ /* gangling link is error */
+ if(options->m_verbose)
+ parallel_print("Warning: <%s> is a dangling link.\n", path2);
goto out;
- } /* end if */
+ }
+ else
+ is_dangle_link2=1;
+ }
+ else if (ret < 0)
+ goto out;
+
+ /* found dangling link */
+ if (is_dangle_link1 || is_dangle_link2)
+ goto out2;
+ /* Only external links will have a query function registered */
+ if(linkinfo1.linfo.type == H5L_TYPE_EXTERNAL && linkinfo2.linfo.type == H5L_TYPE_EXTERNAL)
+ {
/* If the buffers are the same size, compare them */
- if(li1.u.val_size == li2.u.val_size)
+ if(linkinfo1.linfo.u.val_size == linkinfo2.linfo.u.val_size)
{
- ret = HDmemcmp(extlinkbuf1, extlinkbuf2, li1.u.val_size);
+ ret = HDmemcmp(linkinfo1.trg_path, linkinfo2.trg_path, linkinfo1.linfo.u.val_size);
}
else
ret = 1;
- /* if "extlinkbuf1" != "extlinkbuf2" then the links are "different" */
+ /* if "linkinfo1.trg_path" != "linkinfo2.trg_path" then the links
+ * are "different" extlinkinfo#.path is combination string of
+ * file_name and obj_name
+ */
nfound = (ret != 0) ? 1 : 0;
if(print_objname(options, nfound))
do_print_objname("external link", path1, path2);
- if (options->linkfollow)
+ if (options->follow_links)
{
- const char *extlink_file1;
- const char *extlink_path1;
- const char *extlink_file2;
- const char *extlink_path2;
-
- /* get file name and obj path */
- if(H5Lunpack_elink_val(extlinkbuf1, li1.u.val_size, NULL, &extlink_file1, &extlink_path1)<0)
+ /* objects are not the same type */
+ if (linkinfo1.trg_type != linkinfo2.trg_type)
{
- parallel_print("error: unable to unpack external link value of obj1\n");
- goto out;
- }
-
- /* get file name and obj path */
- if(H5Lunpack_elink_val(extlinkbuf2, li2.u.val_size, NULL, &extlink_file2, &extlink_path2)<0)
- {
- parallel_print("error: unable to unpack external link value of obj2\n");
+ if (options->m_verbose||options->m_list_not_cmp)
+ {
+ parallel_print("<%s> is of type %s and <%s> is of type %s\n", path1, get_type(linkinfo1.trg_type), path2, get_type(linkinfo2.trg_type));
+ }
+ options->not_cmp=1;
goto out;
}
- nfound = h5diff(extlink_file1, extlink_file2,
- extlink_path1, extlink_path2, options);
- }
+ nfound = diff(file1_id, path1,
+ file2_id, path2,
+ options, linkinfo1.trg_type);
+ }
- HDfree(extlinkbuf1);
- HDfree(extlinkbuf2);
+ /* free link info buffer */
+ HDfree(linkinfo1.trg_path);
+ HDfree(linkinfo2.trg_path);
} /* end if */
- else
+ else
{
/* If one or both of these links isn't an external link, we can only
* compare information from H5Lget_info since we don't have a query
@@ -1643,7 +1571,8 @@ hsize_t diff(hid_t file1_id,
* If the link classes or the buffer length are not the
* same, the links are "different"
*/
- if((li1.type != li2.type) || (li1.u.val_size != li2.u.val_size))
+ if((linkinfo1.linfo.type != linkinfo2.linfo.type) ||
+ (linkinfo1.linfo.u.val_size != linkinfo2.linfo.u.val_size))
nfound = 1;
else
nfound = 0;
@@ -1671,17 +1600,43 @@ hsize_t diff(hid_t file1_id,
out:
options->err_stat = 1;
- /* free buf used for softlink */
- if (softlinkinfo1.buf)
- HDfree(softlinkinfo1.buf);
- if (softlinkinfo2.buf)
- HDfree(softlinkinfo2.buf);
-
- /* free buf used for softlink */
- if (extlinkbuf1)
- HDfree(extlinkbuf1);
- if (extlinkbuf2)
- HDfree(extlinkbuf2);
+out2:
+ /*-----------------------------------
+ * handle dangling link(s)
+ */
+ /* both path1 and path2 are dangling links */
+ if(is_dangle_link1 && is_dangle_link2)
+ {
+ if(print_objname(options, nfound))
+ {
+ do_print_objname("dangling link", path1, path2);
+ print_found(nfound);
+ }
+ }
+ /* path1 is dangling link */
+ else if (is_dangle_link1)
+ {
+ if(options->m_verbose)
+ parallel_print("obj1 <%s> is a dangling link.\n", path1);
+ nfound++;
+ if(print_objname(options, nfound))
+ print_found(nfound);
+ }
+ /* path2 is dangling link */
+ else if (is_dangle_link2)
+ {
+ if(options->m_verbose)
+ parallel_print("obj2 <%s> is a dangling link.\n", path2);
+ nfound++;
+ if(print_objname(options, nfound))
+ print_found(nfound);
+ }
+
+ /* free link info buffer */
+ if (linkinfo1.trg_path)
+ HDfree(linkinfo1.trg_path);
+ if (linkinfo2.trg_path)
+ HDfree(linkinfo2.trg_path);
/* close */
/* disable error reporting */
diff --git a/tools/lib/h5diff.h b/tools/lib/h5diff.h
index 090d3d9..6718d9a 100644
--- a/tools/lib/h5diff.h
+++ b/tools/lib/h5diff.h
@@ -35,7 +35,8 @@ typedef struct {
double percent; /* relative error value */
int n; /* count, compare up to count */
hsize_t count; /* count value */
- int linkfollow; /* link follow*/
+ int follow_links; /* follow symbolic links */
+ int no_dangle_links; /* return error when find dangling link */
int err_stat; /* an error ocurred (1, error, 0, no error) */
int cmn_objs; /* do we have common objects */
int not_cmp; /* are the objects comparable */