summaryrefslogtreecommitdiffstats
diff options
context:
space:
mode:
-rw-r--r--src/H5Sall.c2
-rw-r--r--src/H5Shyper.c52
-rw-r--r--src/H5Spoint.c2
-rw-r--r--src/H5Sprivate.h8
-rw-r--r--src/H5Sselect.c2
-rw-r--r--src/H5TB.c8
6 files changed, 38 insertions, 36 deletions
diff --git a/src/H5Sall.c b/src/H5Sall.c
index f35b23b..0f9e768 100644
--- a/src/H5Sall.c
+++ b/src/H5Sall.c
@@ -494,7 +494,7 @@ H5S_all_release (H5S_t *space)
REVISION LOG
--------------------------------------------------------------------------*/
hsize_t
-H5S_all_npoints (H5S_t *space)
+H5S_all_npoints (const H5S_t *space)
{
intn i; /* Counters */
hsize_t ret_value;
diff --git a/src/H5Shyper.c b/src/H5Shyper.c
index e1d3109..14a4bb6 100644
--- a/src/H5Shyper.c
+++ b/src/H5Shyper.c
@@ -30,8 +30,8 @@ typedef struct {
H5S_sel_iter_t *iter;
size_t nelmts;
H5D_transfer_t xfer_mode;
- void *_buf;
- void *tconv_buf;
+ const void *src;
+ void *dst;
H5S_hyper_bound_t **lo_bounds;
H5S_hyper_bound_t **hi_bounds;
} H5S_hyper_fhyper_info_t;
@@ -153,7 +153,7 @@ printf("%s: check 1.1, bound_count=%d\n",FUNC,bound_count);
/* Check if we've allocated the array yet */
if(num_reg==0) {
/* Allocate array */
- ret_value=H5MM_malloc(sizeof(H5S_hyper_node_t));
+ ret_value=H5MM_malloc(sizeof(H5S_hyper_region_t));
/* Initialize with first region */
ret_value[0].start=lo_bounds[0][i].bound;
@@ -167,7 +167,7 @@ printf("%s: check 1.1, bound_count=%d\n",FUNC,bound_count);
ret_value[curr_reg].end=MAX(hi_bounds[0][i].bound,ret_value[curr_reg].end);
else { /* no overlap with previous region, add new region */
/* Enlarge array */
- ret_value=H5MM_realloc(ret_value,sizeof(H5S_hyper_node_t)*(num_reg+1));
+ ret_value=H5MM_realloc(ret_value,sizeof(H5S_hyper_region_t)*(num_reg+1));
/* Initialize with new region */
ret_value[num_reg].start=lo_bounds[0][i].bound;
@@ -318,7 +318,7 @@ printf("%s: check 2.1, i=%d\n",FUNC,(int)i);
if (H5F_arr_read (fhyper_info->f, fhyper_info->layout,
fhyper_info->comp, fhyper_info->efl, hsize, hsize, zero,
file_offset, fhyper_info->xfer_mode,
- fhyper_info->_buf/*out*/)<0) {
+ fhyper_info->dst/*out*/)<0) {
HRETURN_ERROR (H5E_DATASPACE, H5E_READERROR, 0, "read error");
}
#ifdef QAK
@@ -326,7 +326,7 @@ printf("%s: check 2.2\n",FUNC);
#endif /* QAK */
/* Advance the pointer in the buffer */
- fhyper_info->_buf=((uint8 *)fhyper_info->_buf)+((regions[i].end-regions[i].start)+1)*fhyper_info->elmt_size;
+ fhyper_info->dst=((uint8 *)fhyper_info->dst)+((regions[i].end-regions[i].start)+1)*fhyper_info->elmt_size;
/* Increment the number of elements read */
num_read+=(regions[i].end-regions[i].start)+1;
@@ -439,7 +439,8 @@ printf("%s: check 1.0\n", FUNC);
fhyper_info.iter=file_iter;
fhyper_info.nelmts=nelmts;
fhyper_info.xfer_mode=xfer_mode;
- fhyper_info._buf=_buf;
+ fhyper_info.src=NULL;
+ fhyper_info.dst=_buf;
fhyper_info.lo_bounds=lo_bounds;
fhyper_info.hi_bounds=hi_bounds;
@@ -530,12 +531,12 @@ H5S_hyper_fwrite (intn dim, H5S_hyper_fhyper_info_t *fhyper_info)
if (H5F_arr_write (fhyper_info->f, fhyper_info->layout,
fhyper_info->comp, fhyper_info->efl, hsize, hsize, zero,
file_offset, fhyper_info->xfer_mode,
- fhyper_info->_buf)<0) {
+ fhyper_info->src)<0) {
HRETURN_ERROR (H5E_DATASPACE, H5E_WRITEERROR, 0, "write error");
}
/* Advance the pointer in the buffer */
- fhyper_info->_buf=((uint8 *)fhyper_info->_buf)+((regions[i].end-regions[i].start)+1)*fhyper_info->elmt_size;
+ fhyper_info->src=((uint8 *)fhyper_info->src)+((regions[i].end-regions[i].start)+1)*fhyper_info->elmt_size;
/* Increment the number of elements read */
num_written+=(regions[i].end-regions[i].start)+1;
@@ -639,7 +640,8 @@ printf("%s: check 1.0\n", FUNC);
fhyper_info.iter=file_iter;
fhyper_info.nelmts=nelmts;
fhyper_info.xfer_mode=xfer_mode;
- fhyper_info._buf=_buf;
+ fhyper_info.src=_buf;
+ fhyper_info.dst=NULL;
fhyper_info.lo_bounds=lo_bounds;
fhyper_info.hi_bounds=hi_bounds;
@@ -674,7 +676,7 @@ printf("%s: check 1.0\n", FUNC);
static size_t
H5S_hyper_mread (intn dim, H5S_hyper_fhyper_info_t *fhyper_info)
{
- hssize_t mem_size[H5O_LAYOUT_NDIMS]; /*size of memory buffer*/
+ hsize_t mem_size[H5O_LAYOUT_NDIMS]; /*size of memory buffer*/
hssize_t mem_offset[H5O_LAYOUT_NDIMS]; /*offset of slab in memory*/
hsize_t hsize[H5O_LAYOUT_NDIMS]; /*size of hyperslab */
hssize_t zero[H5O_LAYOUT_NDIMS]; /*zero */
@@ -713,7 +715,7 @@ for(i=0; i<num_regions; i++)
/* Set up hyperslab I/O parameters which apply to all regions */
/* Set up the size of the memory space */
- HDmemcpy(mem_size,fhyper_info->space->extent.u.simple.size,fhyper_info->space->extent.u.simple.rank*sizeof(hssize_t));
+ HDmemcpy(mem_size,fhyper_info->space->extent.u.simple.size,fhyper_info->space->extent.u.simple.rank*sizeof(hsize_t));
mem_size[fhyper_info->space->extent.u.simple.rank]=fhyper_info->elmt_size;
/* Copy the location of the region in the file */
@@ -740,13 +742,13 @@ printf("%s: check 2.1, i=%d\n",FUNC,(int)i);
* Gather from memory.
*/
if (H5V_hyper_copy (fhyper_info->space->extent.u.simple.rank+1,
- hsize, hsize, zero, fhyper_info->tconv_buf,
- mem_size, mem_offset, fhyper_info->_buf)<0) {
+ hsize, hsize, zero, fhyper_info->dst,
+ mem_size, mem_offset, fhyper_info->src)<0) {
HRETURN_ERROR (H5E_DATASPACE, H5E_READERROR, 0, "unable to gather data from memory");
}
/* Advance the pointer in the buffer */
- fhyper_info->tconv_buf=((uint8 *)fhyper_info->tconv_buf)+((regions[i].end-regions[i].start)+1)*fhyper_info->elmt_size;
+ fhyper_info->dst=((uint8 *)fhyper_info->dst)+((regions[i].end-regions[i].start)+1)*fhyper_info->elmt_size;
/* Increment the number of elements read */
num_read+=(regions[i].end-regions[i].start)+1;
@@ -863,8 +865,8 @@ printf("%s: check 3.2, lo[%d][%d]=%d, hi[%d][%d]=%d\n",FUNC,i,j,(int)lo_bounds[i
fhyper_info.space=mem_space;
fhyper_info.iter=mem_iter;
fhyper_info.nelmts=nelmts;
- fhyper_info._buf=_buf;
- fhyper_info.tconv_buf=_tconv_buf;
+ fhyper_info.src=_buf;
+ fhyper_info.dst=_tconv_buf;
fhyper_info.lo_bounds=lo_bounds;
fhyper_info.hi_bounds=hi_bounds;
@@ -905,7 +907,7 @@ printf("%s: check 5.0\n",FUNC);
static size_t
H5S_hyper_mwrite (intn dim, H5S_hyper_fhyper_info_t *fhyper_info)
{
- hssize_t mem_size[H5O_LAYOUT_NDIMS]; /*size of memory buffer*/
+ hsize_t mem_size[H5O_LAYOUT_NDIMS]; /*size of memory buffer*/
hssize_t mem_offset[H5O_LAYOUT_NDIMS]; /*offset of slab in file*/
hsize_t hsize[H5O_LAYOUT_NDIMS]; /*size of hyperslab */
hssize_t zero[H5O_LAYOUT_NDIMS]; /*zero */
@@ -942,7 +944,7 @@ for(i=0; i<num_regions; i++)
/* Set up hyperslab I/O parameters which apply to all regions */
/* Set up the size of the memory space */
- HDmemcpy(mem_size,fhyper_info->space->extent.u.simple.size,fhyper_info->space->extent.u.simple.rank*sizeof(hssize_t));
+ HDmemcpy(mem_size,fhyper_info->space->extent.u.simple.size,fhyper_info->space->extent.u.simple.rank*sizeof(hsize_t));
mem_size[fhyper_info->space->extent.u.simple.rank]=fhyper_info->elmt_size;
/* Copy the location of the region in the file */
@@ -969,13 +971,13 @@ printf("%s: check 3.0\n",FUNC);
* Gather from memory.
*/
if (H5V_hyper_copy (fhyper_info->space->extent.u.simple.rank+1,
- hsize, mem_size, mem_offset, fhyper_info->_buf,
- hsize, zero, fhyper_info->tconv_buf)<0) {
+ hsize, mem_size, mem_offset, fhyper_info->dst,
+ hsize, zero, fhyper_info->src)<0) {
HRETURN_ERROR (H5E_DATASPACE, H5E_READERROR, 0, "unable to gather data from memory");
}
/* Advance the pointer in the buffer */
- fhyper_info->tconv_buf=((uint8 *)fhyper_info->tconv_buf)+((regions[i].end-regions[i].start)+1)*fhyper_info->elmt_size;
+ fhyper_info->src=((uint8 *)fhyper_info->src)+((regions[i].end-regions[i].start)+1)*fhyper_info->elmt_size;
/* Increment the number of elements read */
num_read+=(regions[i].end-regions[i].start)+1;
@@ -1066,8 +1068,8 @@ H5S_hyper_mscat (const void *_tconv_buf, size_t elmt_size,
fhyper_info.space=mem_space;
fhyper_info.iter=mem_iter;
fhyper_info.nelmts=nelmts;
- fhyper_info._buf=_buf;
- fhyper_info.tconv_buf=_tconv_buf;
+ fhyper_info.src=_tconv_buf;
+ fhyper_info.dst=_buf;
fhyper_info.lo_bounds=lo_bounds;
fhyper_info.hi_bounds=hi_bounds;
@@ -1384,7 +1386,7 @@ done:
REVISION LOG
--------------------------------------------------------------------------*/
hsize_t
-H5S_point_npoints (H5S_t *space)
+H5S_point_npoints (const H5S_t *space)
{
FUNC_ENTER (H5S_point_npoints, 0);
diff --git a/src/H5Spoint.c b/src/H5Spoint.c
index 86b1bc9..58e5a60 100644
--- a/src/H5Spoint.c
+++ b/src/H5Spoint.c
@@ -444,7 +444,7 @@ done:
REVISION LOG
--------------------------------------------------------------------------*/
hsize_t
-H5S_hyper_npoints (H5S_t *space)
+H5S_hyper_npoints (const H5S_t *space)
{
FUNC_ENTER (H5S_hyper_npoints, 0);
diff --git a/src/H5Sprivate.h b/src/H5Sprivate.h
index a523405..74a6187 100644
--- a/src/H5Sprivate.h
+++ b/src/H5Sprivate.h
@@ -221,7 +221,7 @@ herr_t H5S_release_simple(H5S_simple_t *simple);
herr_t H5S_extent_copy(H5S_extent_t *dst, const H5S_extent_t *src);
herr_t H5S_select_copy (H5S_t *dst, const H5S_t *src);
herr_t H5S_select_release (H5S_t *space);
-hsize_t H5S_select_npoints (H5S_t *space);
+hsize_t H5S_select_npoints (const H5S_t *space);
intn H5S_extend (H5S_t *space, const hsize_t *size);
/* Conversion functions for simple data spaces */
@@ -279,7 +279,7 @@ herr_t H5S_point_mscat (const void *_tconv_buf, size_t elmt_size,
const H5S_t *mem_space, H5S_sel_iter_t *mem_iter,
size_t nelmts, void *_buf/*out*/);
herr_t H5S_point_release (H5S_t *space);
-hsize_t H5S_point_npoints (H5S_t *space);
+hsize_t H5S_point_npoints (const H5S_t *space);
/* "All" select functions */
herr_t H5S_all_init (const struct H5O_layout_t *layout,
@@ -303,7 +303,7 @@ herr_t H5S_all_mscat (const void *_tconv_buf, size_t elmt_size,
const H5S_t *mem_space, H5S_sel_iter_t *mem_iter,
size_t nelmts, void *_buf/*out*/);
herr_t H5S_all_release (H5S_t *space);
-hsize_t H5S_all_npoints (H5S_t *space);
+hsize_t H5S_all_npoints (const H5S_t *space);
/* Hyperslab selection functions */
herr_t H5S_hyper_init (const struct H5O_layout_t *layout,
@@ -328,6 +328,6 @@ herr_t H5S_hyper_mscat (const void *_tconv_buf, size_t elmt_size,
size_t nelmts, void *_buf/*out*/);
herr_t H5S_hyper_add (H5S_t *space, hssize_t *start, hssize_t *size);
herr_t H5S_hyper_release (H5S_t *space);
-hsize_t H5S_hyper_npoints (H5S_t *space);
+hsize_t H5S_hyper_npoints (const H5S_t *space);
#endif
diff --git a/src/H5Sselect.c b/src/H5Sselect.c
index e07b60b..cfed797 100644
--- a/src/H5Sselect.c
+++ b/src/H5Sselect.c
@@ -356,7 +356,7 @@ hsize_t H5Sselect_npoints (hid_t spaceid)
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
-hsize_t H5S_select_npoints (H5S_t *space)
+hsize_t H5S_select_npoints (const H5S_t *space)
{
herr_t ret_value=FAIL; /* return value */
diff --git a/src/H5TB.c b/src/H5TB.c
index 627f755..b689ee7 100644
--- a/src/H5TB.c
+++ b/src/H5TB.c
@@ -200,7 +200,7 @@ hid_t H5TBget_buf(hsize_t size, hbool_t resize)
if(curr!=NULL) {
void * old_ptr=curr->buf;
- if((curr->buf = H5MM_xrealloc(curr->buf, size))==NULL) {
+ if((curr->buf = H5MM_realloc(curr->buf, size))==NULL) {
curr->buf=old_ptr; /* restore pointer if no memory available */
HRETURN_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL,
"unable to allocate space for temporary buffer");
@@ -213,12 +213,12 @@ hid_t H5TBget_buf(hsize_t size, hbool_t resize)
/* No blocks in the list are acceptable */
/* (either too small or not able to be resized) */
if(curr==NULL) {
- if((new=H5MM_xcalloc(1,sizeof(H5TB_t)))==NULL)
+ if((new=H5MM_calloc(sizeof(H5TB_t)))==NULL)
HRETURN_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL,
"unable to allocate space for temporary buffer struct");
new->inuse=TRUE;
new->size=size;
- if((new->buf=H5MM_xmalloc(size))==NULL) {
+ if((new->buf=H5MM_malloc(size))==NULL) {
H5MM_xfree(new); /* free structure */
HRETURN_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL,
"unable to allocate space for temporary buffer");
@@ -349,7 +349,7 @@ herr_t H5TBresize_ptr(hid_t tbid, hsize_t size)
old_ptr=tbuf->buf;
/* Try to resize buffer to new size */
- if((tbuf->buf = H5MM_xrealloc(tbuf->buf, size))==NULL) {
+ if((tbuf->buf = H5MM_realloc(tbuf->buf, size))==NULL) {
tbuf->buf=old_ptr; /* restore pointer if no memory available */
HRETURN_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL,
"unable to allocate space for temporary buffer");