diff options
51 files changed, 261 insertions, 277 deletions
diff --git a/src/H5Apkg.h b/src/H5Apkg.h index 4216fa3..de57e79 100644 --- a/src/H5Apkg.h +++ b/src/H5Apkg.h @@ -74,7 +74,7 @@ /****************************/ /* Define the shared attribute structure */ typedef struct H5A_shared_t { - unsigned version; /* Version to encode attribute with */ + uint8_t version; /* Version to encode attribute with */ char *name; /* Attribute's name */ H5T_cset_t encoding; /* Character encoding of attribute name */ diff --git a/src/H5Bcache.c b/src/H5Bcache.c index 99930e6..a3b49e9 100644 --- a/src/H5Bcache.c +++ b/src/H5Bcache.c @@ -109,7 +109,7 @@ H5B_serialize(const H5F_t *f, const H5B_t *bt) HDassert(f); HDassert(bt); HDassert(bt->rc_shared); - shared=(H5B_shared_t *)H5RC_GET_OBJ(bt->rc_shared); + shared = (H5B_shared_t *)H5RC_GET_OBJ(bt->rc_shared); HDassert(shared); p = shared->page; @@ -131,10 +131,10 @@ H5B_serialize(const H5F_t *f, const H5B_t *bt) H5F_addr_encode(f, &p, bt->right); /* child keys and pointers */ - native=bt->native; - for (u = 0; u < bt->nchildren; ++u) { + native = bt->native; + for(u = 0; u < bt->nchildren; ++u) { /* encode the key */ - if (shared->type->encode(f, bt, p, native) < 0) + if(shared->type->encode(f, bt, p, native) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTENCODE, FAIL, "unable to encode B-tree key") p += shared->sizeof_rkey; native += shared->type->sizeof_nkey; @@ -142,9 +142,9 @@ H5B_serialize(const H5F_t *f, const H5B_t *bt) /* encode the child address */ H5F_addr_encode(f, &p, bt->child[u]); } /* end for */ - if(bt->nchildren>0) { + if(bt->nchildren > 0) { /* Encode the final key */ - if (shared->type->encode(f, bt, p, native) < 0) + if(shared->type->encode(f, bt, p, native) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTENCODE, FAIL, "unable to encode B-tree key") } /* end if */ @@ -187,29 +187,29 @@ H5B_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, const void *_type, void *udata) HDassert(type); HDassert(type->get_shared); - if (NULL==(bt = H5FL_MALLOC(H5B_t))) - HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed") + if(NULL == (bt = H5FL_MALLOC(H5B_t))) + HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed") HDmemset(&bt->cache_info,0,sizeof(H5AC_info_t)); - if((bt->rc_shared=(type->get_shared)(f, udata))==NULL) - HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, NULL, "can't retrieve B-tree node buffer") - shared=(H5B_shared_t *)H5RC_GET_OBJ(bt->rc_shared); + if(NULL == (bt->rc_shared=(type->get_shared)(f, udata))) + HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "can't retrieve B-tree node buffer") + shared = (H5B_shared_t *)H5RC_GET_OBJ(bt->rc_shared); HDassert(shared); - if (NULL==(bt->native=H5FL_BLK_MALLOC(native_block,shared->sizeof_keys)) || - NULL==(bt->child=H5FL_SEQ_MALLOC(haddr_t,(size_t)shared->two_k))) - HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed") + if(NULL == (bt->native = H5FL_BLK_MALLOC(native_block, shared->sizeof_keys)) || + NULL == (bt->child = H5FL_SEQ_MALLOC(haddr_t, (size_t)shared->two_k))) + HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed") - if (H5F_block_read(f, H5FD_MEM_BTREE, addr, shared->sizeof_rnode, dxpl_id, shared->page)<0) + if(H5F_block_read(f, H5FD_MEM_BTREE, addr, shared->sizeof_rnode, dxpl_id, shared->page)<0) HGOTO_ERROR(H5E_BTREE, H5E_READERROR, NULL, "can't read B-tree node") p = shared->page; /* magic number */ - if (HDmemcmp(p, H5B_MAGIC, (size_t)H5_SIZEOF_MAGIC)) + if(HDmemcmp(p, H5B_MAGIC, (size_t)H5_SIZEOF_MAGIC)) HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, NULL, "wrong B-tree signature") p += 4; /* node type and level */ - if (*p++ != (uint8_t)type->id) + if(*p++ != (uint8_t)type->id) HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, NULL, "incorrect B-tree node type") bt->level = *p++; @@ -221,22 +221,22 @@ H5B_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, const void *_type, void *udata) H5F_addr_decode(f, (const uint8_t **) &p, &(bt->right)); /* the child/key pairs */ - native=bt->native; - for (u = 0; u < bt->nchildren; u++) { + native = bt->native; + for(u = 0; u < bt->nchildren; u++) { /* Decode native key value */ - if ((type->decode) (f, bt, p, native) < 0) + if((type->decode)(f, bt, p, native) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTDECODE, NULL, "unable to decode key") p += shared->sizeof_rkey; native += type->sizeof_nkey; /* Decode address value */ H5F_addr_decode(f, (const uint8_t **) &p, bt->child + u); - } + } /* end for */ /* Decode final key */ - if(bt->nchildren>0) { + if(bt->nchildren > 0) { /* Decode native key value */ - if ((type->decode) (f, bt, p, native) < 0) + if((type->decode)(f, bt, p, native) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTDECODE, NULL, "unable to decode key") } /* end if */ @@ -244,8 +244,8 @@ H5B_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, const void *_type, void *udata) ret_value = bt; done: - if (!ret_value && bt) - (void)H5B_dest(f,bt); + if(!ret_value && bt) + (void)H5B_dest(f, bt); FUNC_LEAVE_NOAPI(ret_value) } /* end H5B_load() */ /*lint !e818 Can't make udata a pointer to const */ @@ -286,8 +286,8 @@ H5B_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr, H5B_t *bt, uns HDassert(shared->type); HDassert(shared->type->encode); - if (bt->cache_info.is_dirty) { - if (H5B_serialize(f, bt) < 0) + if(bt->cache_info.is_dirty) { + if(H5B_serialize(f, bt) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTSERIALIZE, FAIL, "unable to serialize B-tree") /* @@ -295,14 +295,14 @@ H5B_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr, H5B_t *bt, uns * bother writing data for the child entries that don't exist or * for the final unchanged children. */ - if (H5F_block_write(f, H5FD_MEM_BTREE, addr, shared->sizeof_rnode, dxpl_id, shared->page) < 0) + if(H5F_block_write(f, H5FD_MEM_BTREE, addr, shared->sizeof_rnode, dxpl_id, shared->page) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFLUSH, FAIL, "unable to save B-tree node to disk") bt->cache_info.is_dirty = FALSE; } /* end if */ - if (destroy) - if (H5B_dest(f,bt) < 0) + if(destroy) + if(H5B_dest(f,bt) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFREE, FAIL, "unable to destroy B-tree node") done: @@ -356,9 +356,9 @@ H5B_dest(H5F_t *f, H5B_t *bt) /* Release resources for B-tree node */ H5FL_SEQ_FREE(haddr_t, bt->child); - (void)H5FL_BLK_FREE(native_block, bt->native); + bt->native = H5FL_BLK_FREE(native_block, bt->native); H5RC_DEC(bt->rc_shared); - (void)H5FL_FREE(H5B_t, bt); + bt = H5FL_FREE(H5B_t, bt); done: FUNC_LEAVE_NOAPI(ret_value) @@ -393,8 +393,8 @@ H5B_clear(H5F_t *f, H5B_t *bt, hbool_t destroy) /* Reset the dirty flag. */ bt->cache_info.is_dirty = FALSE; - if (destroy) - if (H5B_dest(f, bt) < 0) + if(destroy) + if(H5B_dest(f, bt) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFREE, FAIL, "unable to destroy B-tree node") done: @@ -417,7 +417,7 @@ done: *------------------------------------------------------------------------- */ static herr_t -H5B_compute_size(const H5F_t *f, const H5B_t *bt, size_t *size_ptr) +H5B_compute_size(const H5F_t UNUSED *f, const H5B_t *bt, size_t *size_ptr) { H5B_shared_t *shared; /* Pointer to shared B-tree info */ @@ -427,7 +427,7 @@ H5B_compute_size(const H5F_t *f, const H5B_t *bt, size_t *size_ptr) HDassert(f); HDassert(bt); HDassert(bt->rc_shared); - shared=(H5B_shared_t *)H5RC_GET_OBJ(bt->rc_shared); + shared = (H5B_shared_t *)H5RC_GET_OBJ(bt->rc_shared); HDassert(shared); HDassert(shared->type); HDassert(size_ptr); @@ -437,3 +437,4 @@ H5B_compute_size(const H5F_t *f, const H5B_t *bt, size_t *size_ptr) FUNC_LEAVE_NOAPI(SUCCEED) } /* H5B_compute_size() */ + diff --git a/src/H5Dbtree.c b/src/H5Dbtree.c index 7dfc288..c9561f2 100644 --- a/src/H5Dbtree.c +++ b/src/H5Dbtree.c @@ -1464,6 +1464,7 @@ H5D_btree_debug(H5F_t *f, hid_t dxpl_id, haddr_t addr, FILE * stream, int indent /* Reset "fake" storage info */ HDmemset(&storage, 0, sizeof(storage)); + storage.idx_type = H5D_CHUNK_BTREE; /* Allocate the shared structure */ if(H5D_btree_shared_create(f, &storage, ndims) < 0) diff --git a/src/H5Dchunk.c b/src/H5Dchunk.c index fa96aac..b22a097 100644 --- a/src/H5Dchunk.c +++ b/src/H5Dchunk.c @@ -374,7 +374,7 @@ done: *------------------------------------------------------------------------- */ static herr_t -H5D_chunk_construct(H5F_t *f, H5D_t *dset) +H5D_chunk_construct(H5F_t UNUSED *f, H5D_t *dset) { const H5T_t *type = dset->shared->type; /* Convenience pointer to dataset's datatype */ hsize_t max_dim[H5O_LAYOUT_NDIMS]; /* Maximum size of data in elements */ @@ -336,7 +336,7 @@ H5E_get_stack(void) FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5E_get_stack) - estack = pthread_getspecific(H5TS_errstk_key_g); + estack = (H5E_t *)pthread_getspecific(H5TS_errstk_key_g); if(!estack) { /* no associated value with current thread - create one */ diff --git a/src/H5EAdbg.c b/src/H5EAdbg.c index d9d0a4c..0ac4807 100644 --- a/src/H5EAdbg.c +++ b/src/H5EAdbg.c @@ -183,7 +183,7 @@ END_FUNC(PKG) /* end H5EA__hdr_debug() */ */ BEGIN_FUNC(PKG, ERR, herr_t, SUCCEED, FAIL, -H5EA__iblock_debug(H5F_t *f, hid_t dxpl_id, haddr_t addr, FILE *stream, int indent, +H5EA__iblock_debug(H5F_t *f, hid_t dxpl_id, haddr_t UNUSED addr, FILE *stream, int indent, int fwidth, const H5EA_class_t *cls, haddr_t hdr_addr)) /* Local variables */ diff --git a/src/H5EAhdr.c b/src/H5EAhdr.c index 1e01601..f821476 100644 --- a/src/H5EAhdr.c +++ b/src/H5EAhdr.c @@ -50,8 +50,10 @@ /* Local Macros */ /****************/ +#ifndef NDEBUG /* Max. # of bits for max. nelmts index */ #define H5EA_MAX_NELMTS_IDX_MAX 64 +#endif /* NDEBUG */ /* # of elements in a data block for a particular super block */ #define H5EA_SBLK_DBLK_NELMTS(s, m) \ diff --git a/src/H5Eint.c b/src/H5Eint.c index 52f8aac..831d51b 100644 --- a/src/H5Eint.c +++ b/src/H5Eint.c @@ -275,7 +275,7 @@ H5E_walk1_cb(int n, H5E_error1_t *err_desc, void *client_data) fprintf(stream, "thread 0"); } /* end block */ #elif defined(H5_HAVE_THREADSAFE) - fprintf(stream, "thread %lu", HDpthread_self_ulong()); + fprintf(stream, "thread %lu", (unsigned long)HDpthread_self_ulong()); #else fprintf(stream, "thread 0"); #endif @@ -392,7 +392,7 @@ H5E_walk2_cb(unsigned n, const H5E_error2_t *err_desc, void *client_data) fprintf(stream, "thread 0"); } /* end block */ #elif defined(H5_HAVE_THREADSAFE) - fprintf(stream, "thread %lu", HDpthread_self_ulong()); + fprintf(stream, "thread %lu", (unsigned long)HDpthread_self_ulong()); #else fprintf(stream, "thread 0"); #endif @@ -1717,7 +1717,6 @@ H5FD_get_fs_type_map(const H5FD_t *file, H5FD_mem_t *type_map) FUNC_ENTER_NOAPI(H5FD_get_fs_type_map, FAIL) /* Sanity check */ - HDassert(file); HDassert(file && file->cls); HDassert(type_map); diff --git a/src/H5FDpublic.h b/src/H5FDpublic.h index 52d7eb9..fde8556 100644 --- a/src/H5FDpublic.h +++ b/src/H5FDpublic.h @@ -26,23 +26,8 @@ #define H5_HAVE_VFL 1 /*define a convenient app feature test*/ #define H5FD_VFD_DEFAULT 0 /* Default VFL driver value */ -/* - * Types of allocation requests. The values larger than H5FD_MEM_DEFAULT - * should not change other than adding new types to the end. These numbers - * might appear in files. - */ -typedef enum H5FD_mem_t { - H5FD_MEM_NOLIST = -1, /*must be negative*/ - H5FD_MEM_DEFAULT = 0, /*must be zero*/ - H5FD_MEM_SUPER = 1, - H5FD_MEM_BTREE = 2, - H5FD_MEM_DRAW = 3, - H5FD_MEM_GHEAP = 4, - H5FD_MEM_LHEAP = 5, - H5FD_MEM_OHDR = 6, - - H5FD_MEM_NTYPES /*must be last*/ -} H5FD_mem_t; +/* Types of allocation requests: see H5Fpublic.h */ +typedef enum H5F_mem_t H5FD_mem_t; /* Map "fractal heap" header blocks to 'ohdr' type file memory, since its * a fair amount of work to add a new kind of file memory and they are similar @@ -290,12 +290,12 @@ H5FO_mark(const H5F_t *f, haddr_t addr, hbool_t deleted) PURPOSE Check if an object is marked to be deleted when it is closed USAGE - htri_t H5FO_marked(f,addr) + hbool_t H5FO_marked(f,addr) const H5F_t *f; IN: File opened object is in haddr_t addr; IN: Address of object to delete RETURNS - Returns a TRUE/FALSE on success, negative on failure + Returns a TRUE/FALSE on success DESCRIPTION Checks if the object is currently in the "opened objects" tree and whether its marks for deletion from the file when it is closed. @@ -304,11 +304,11 @@ H5FO_mark(const H5F_t *f, haddr_t addr, hbool_t deleted) EXAMPLES REVISION LOG --------------------------------------------------------------------------*/ -htri_t +hbool_t H5FO_marked(const H5F_t *f, haddr_t addr) { H5FO_open_obj_t *open_obj; /* Information about open object */ - htri_t ret_value = FAIL; /* Return value */ + hbool_t ret_value = FALSE; /* Return value */ FUNC_ENTER_NOAPI_NOFUNC(H5FO_marked) @@ -320,7 +320,7 @@ H5FO_marked(const H5F_t *f, haddr_t addr) /* Get the object node from the container */ if(NULL != (open_obj = (H5FO_open_obj_t *)H5SL_search(f->shared->open_objs, &addr))) - ret_value = open_obj->deleted; + ret_value = (htri_t)open_obj->deleted; FUNC_LEAVE_NOAPI(ret_value) } /* end H5FO_marked() */ diff --git a/src/H5FOprivate.h b/src/H5FOprivate.h index 9458a56..4648f02 100644 --- a/src/H5FOprivate.h +++ b/src/H5FOprivate.h @@ -41,7 +41,7 @@ H5_DLL void *H5FO_opened(const H5F_t *f, haddr_t addr); H5_DLL herr_t H5FO_insert(const H5F_t *f, haddr_t addr, void *obj, hbool_t delete_flag); H5_DLL herr_t H5FO_delete(H5F_t *f, hid_t dxpl_id, haddr_t addr); H5_DLL herr_t H5FO_mark(const H5F_t *f, haddr_t addr, hbool_t deleted); -H5_DLL htri_t H5FO_marked(const H5F_t *f, haddr_t addr); +H5_DLL hbool_t H5FO_marked(const H5F_t *f, haddr_t addr); H5_DLL herr_t H5FO_dest(const H5F_t *f); H5_DLL herr_t H5FO_top_create(H5F_t *f); H5_DLL herr_t H5FO_top_incr(const H5F_t *f, haddr_t addr); diff --git a/src/H5FSsection.c b/src/H5FSsection.c index 9ad6c70..51229cb 100644 --- a/src/H5FSsection.c +++ b/src/H5FSsection.c @@ -27,6 +27,7 @@ #define H5FS_PACKAGE /*suppress error about including H5FSpkg */ + /***********/ /* Headers */ /***********/ @@ -36,15 +37,11 @@ #include "H5MFprivate.h" /* File memory management */ #include "H5Vprivate.h" /* Vectors and arrays */ + /****************/ /* Local Macros */ /****************/ -/* #define QAK */ - -/* Default starting size of section buffer */ -#define H5FS_SINFO_SIZE_DEFAULT 64 - /******************/ /* Local Typedefs */ @@ -87,6 +84,7 @@ static herr_t H5FS_sect_merge(H5FS_t *fspace, H5FS_section_info_t **sect, static htri_t H5FS_sect_find_node(H5FS_t *fspace, hsize_t request, H5FS_section_info_t **node); static herr_t H5FS_sect_serialize_size(H5FS_t *fspace); + /*********************/ /* Package Variables */ /*********************/ @@ -178,8 +176,9 @@ done: /* Release bins for skip lists */ if(sinfo->bins) sinfo->bins = H5FL_SEQ_FREE(H5FS_bin_t, sinfo->bins); + /* Release free space section info */ - H5FL_FREE(H5FS_sinfo_t, sinfo); + sinfo = H5FL_FREE(H5FS_sinfo_t, sinfo); } /* end if */ FUNC_LEAVE_NOAPI(ret_value) diff --git a/src/H5Faccum.c b/src/H5Faccum.c index 9529e0c..d4e142b 100644 --- a/src/H5Faccum.c +++ b/src/H5Faccum.c @@ -597,7 +597,7 @@ done: *------------------------------------------------------------------------- */ herr_t -H5F_accum_free(H5F_t *f, hid_t dxpl_id, H5FD_mem_t type, haddr_t addr, +H5F_accum_free(H5F_t *f, hid_t dxpl_id, H5FD_mem_t UNUSED type, haddr_t addr, hsize_t size) { herr_t ret_value = SUCCEED; /* Return value */ diff --git a/src/H5Fprivate.h b/src/H5Fprivate.h index 512d1b13..2323936 100644 --- a/src/H5Fprivate.h +++ b/src/H5Fprivate.h @@ -498,6 +498,7 @@ H5_DLL hbool_t H5F_use_latest_format(const H5F_t *f); H5_DLL H5F_close_degree_t H5F_get_fc_degree(const H5F_t *f); H5_DLL hbool_t H5F_store_msg_crt_idx(const H5F_t *f); H5_DLL hbool_t H5F_is_tmp_addr(const H5F_t *f, haddr_t addr); +H5_DLL hbool_t H5F_use_tmp_space(const H5F_t *f); /* Functions that retrieve values from VFD layer */ H5_DLL hbool_t H5F_has_feature(const H5F_t *f, unsigned feature); diff --git a/src/H5Fpublic.h b/src/H5Fpublic.h index 287e9b5..e23ad2d 100644 --- a/src/H5Fpublic.h +++ b/src/H5Fpublic.h @@ -111,6 +111,24 @@ typedef struct H5F_info_t { } sohm; } H5F_info_t; +/* + * Types of allocation requests. The values larger than H5FD_MEM_DEFAULT + * should not change other than adding new types to the end. These numbers + * might appear in files. + */ +typedef enum H5F_mem_t { + H5FD_MEM_NOLIST = -1, /*must be negative*/ + H5FD_MEM_DEFAULT = 0, /*must be zero*/ + H5FD_MEM_SUPER = 1, + H5FD_MEM_BTREE = 2, + H5FD_MEM_DRAW = 3, + H5FD_MEM_GHEAP = 4, + H5FD_MEM_LHEAP = 5, + H5FD_MEM_OHDR = 6, + + H5FD_MEM_NTYPES /*must be last*/ +} H5F_mem_t; + /* Library's file format versions */ typedef enum H5F_libver_t { H5F_LIBVER_EARLIEST, /* Use the earliest possible format for storing objects */ diff --git a/src/H5Gcache.c b/src/H5Gcache.c index c17c97f..6d497b6 100644 --- a/src/H5Gcache.c +++ b/src/H5Gcache.c @@ -312,7 +312,7 @@ H5G_node_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr, H5G_node_ /* entries */ if(H5G_ent_encode_vec(f, &p, sym->entry, sym->nsyms) < 0) HGOTO_ERROR(H5E_SYM, H5E_CANTENCODE, FAIL, "can't serialize") - HDmemset(p, 0, size - (p - node)); + HDmemset(p, 0, size - (size_t)(p - node)); /* Write the serialized symbol table node. */ if(H5F_block_write(f, H5FD_MEM_BTREE, addr, size, dxpl_id, node) < 0) diff --git a/src/H5Gcompact.c b/src/H5Gcompact.c index 9ecd6c1..26773cb 100644 --- a/src/H5Gcompact.c +++ b/src/H5Gcompact.c @@ -523,7 +523,7 @@ H5G_compact_lookup(H5O_loc_t *oloc, const char *name, H5O_link_t *lnk, HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "error iterating over link messages") /* Determine if we found the link we were looking for */ - ret_value = udata.found; + ret_value = (htri_t)udata.found; done: FUNC_LEAVE_NOAPI(ret_value) diff --git a/src/H5Glink.c b/src/H5Glink.c index 7051453..37a0ede 100644 --- a/src/H5Glink.c +++ b/src/H5Glink.c @@ -377,7 +377,7 @@ H5G_link_to_info(const H5O_link_t *lnk, H5L_info_t *info) if((cb_ret = (link_class->query_func)(lnk->name, lnk->u.ud.udata, lnk->u.ud.size, NULL, (size_t)0)) < 0) HGOTO_ERROR(H5E_LINK, H5E_CALLBACK, FAIL, "query buffer size callback returned failure") - info->u.val_size = cb_ret; + info->u.val_size = (size_t)cb_ret; } /* end if */ else info->u.val_size = 0; diff --git a/src/H5Gnode.c b/src/H5Gnode.c index fe381fd..a58c66a 100644 --- a/src/H5Gnode.c +++ b/src/H5Gnode.c @@ -299,31 +299,31 @@ static herr_t H5G_node_create(H5F_t *f, hid_t dxpl_id, H5B_ins_t UNUSED op, void *_lt_key, void UNUSED *_udata, void *_rt_key, haddr_t *addr_p/*out*/) { - H5G_node_key_t *lt_key = (H5G_node_key_t *) _lt_key; - H5G_node_key_t *rt_key = (H5G_node_key_t *) _rt_key; - H5G_node_t *sym = NULL; - hsize_t size = 0; - herr_t ret_value=SUCCEED; /* Return value */ + H5G_node_key_t *lt_key = (H5G_node_key_t *)_lt_key; + H5G_node_key_t *rt_key = (H5G_node_key_t *)_rt_key; + H5G_node_t *sym = NULL; + hsize_t size = 0; + herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI_NOINIT(H5G_node_create); /* * Check arguments. */ - assert(f); - assert(H5B_INS_FIRST == op); + HDassert(f); + HDassert(H5B_INS_FIRST == op); if(NULL == (sym = H5FL_CALLOC(H5G_node_t))) - HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed"); + HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed") size = H5G_node_size_real(f); if(HADDR_UNDEF == (*addr_p = H5MF_alloc(f, H5FD_MEM_BTREE, dxpl_id, size))) - HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to allocate file space"); + HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to allocate file space") sym->entry = H5FL_SEQ_CALLOC(H5G_entry_t, (size_t)(2 * H5F_SYM_LEAF_K(f))); - if(NULL==sym->entry) - HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed"); + if(NULL == sym->entry) + HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed") if(H5AC_set(f, dxpl_id, H5AC_SNODE, *addr_p, sym, H5AC__NO_FLAGS_SET) < 0) - HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to cache symbol table leaf node"); + HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to cache symbol table leaf node") /* * The left and right symbols in an empty tree are both the * empty string stored at offset zero by the H5G functions. This @@ -339,13 +339,13 @@ done: if(ret_value < 0) { if(sym != NULL) { if(sym->entry != NULL) - H5FL_SEQ_FREE(H5G_entry_t, sym->entry); - (void)H5FL_FREE(H5G_node_t, sym); + sym->entry = H5FL_SEQ_FREE(H5G_entry_t, sym->entry); + sym = H5FL_FREE(H5G_node_t, sym); } /* end if */ } /* end if */ - FUNC_LEAVE_NOAPI(ret_value); -} + FUNC_LEAVE_NOAPI(ret_value) +} /* end H5G_node_create() */ /*------------------------------------------------------------------------- @@ -636,7 +636,7 @@ H5G_node_insert(H5F_t *f, hid_t dxpl_id, haddr_t addr, */ rt = sn->nsyms; while(lt < rt) { - idx = (lt + rt) / 2; + idx = (int)((lt + rt) / 2); s = base + sn->entry[idx].name_off; /* Check if symbol is already present */ @@ -644,9 +644,9 @@ H5G_node_insert(H5F_t *f, hid_t dxpl_id, haddr_t addr, HGOTO_ERROR(H5E_SYM, H5E_CANTINSERT, H5B_INS_ERROR, "symbol is already present in symbol table") if (cmp < 0) - rt = idx; + rt = (unsigned)idx; else - lt = idx + 1; + lt = (unsigned)(idx + 1); } /* end while */ idx += cmp > 0 ? 1 : 0; @@ -689,15 +689,17 @@ H5G_node_insert(H5F_t *f, hid_t dxpl_id, haddr_t addr, insert_into = sn; if(idx == (int)H5F_SYM_LEAF_K(f)) md_key->offset = ent.name_off; - } else { + } /* end if */ + else { idx -= H5F_SYM_LEAF_K(f); insert_into = snrt; - if(idx == (int)H5F_SYM_LEAF_K (f)) { + if(idx == (int)H5F_SYM_LEAF_K(f)) { rt_key->offset = ent.name_off; *rt_key_changed = TRUE; } /* end if */ } /* end else */ - } else { + } /* end if */ + else { /* Where to insert the new entry? */ ret_value = H5B_INS_NOOP; sn_flags |= H5AC__DIRTIED_FLAG; diff --git a/src/H5HFdblock.c b/src/H5HFdblock.c index 3a911d6..e0a1069 100644 --- a/src/H5HFdblock.c +++ b/src/H5HFdblock.c @@ -35,6 +35,7 @@ /***********/ #include "H5private.h" /* Generic Functions */ #include "H5Eprivate.h" /* Error handling */ +#include "H5Fprivate.h" /* File access */ #include "H5HFpkg.h" /* Fractal heaps */ #include "H5MFprivate.h" /* File memory management */ #include "H5Vprivate.h" /* Vectors and arrays */ diff --git a/src/H5HFhdr.c b/src/H5HFhdr.c index 4fd527d..d1f2675 100644 --- a/src/H5HFhdr.c +++ b/src/H5HFhdr.c @@ -43,6 +43,7 @@ /* Local Macros */ /****************/ +#ifndef NDEBUG /* Limit on the size of the max. direct block size */ /* (This is limited to 32-bits currently, because I think it's unlikely to * need to be larger, the 32-bit limit for H5V_log2_of2(n), and @@ -55,6 +56,8 @@ * need to be larger, and its encoded with a maxiumum of 16-bits - QAK) */ #define H5HF_WIDTH_LIMIT (64 * 1024) +#endif /* NDEBUG */ + /******************/ /* Local Typedefs */ @@ -219,7 +222,7 @@ H5HF_hdr_finish_init_phase1(H5HF_hdr_t *hdr) HDassert(hdr); /* Compute/cache some values */ - hdr->heap_off_size = H5HF_SIZEOF_OFFSET_BITS(hdr->man_dtable.cparam.max_index); + hdr->heap_off_size = (uint8_t)H5HF_SIZEOF_OFFSET_BITS(hdr->man_dtable.cparam.max_index); if(H5HF_dtable_init(&hdr->man_dtable) < 0) HGOTO_ERROR(H5E_HEAP, H5E_CANTINIT, FAIL, "can't initialize doubling table info") diff --git a/src/H5HFhuge.c b/src/H5HFhuge.c index 60c6c9f..792a865 100644 --- a/src/H5HFhuge.c +++ b/src/H5HFhuge.c @@ -68,20 +68,12 @@ /* Local v2 B-tree operations */ static herr_t H5HF_huge_bt2_create(H5HF_hdr_t *hdr, hid_t dxpl_id); -/* v2 B-tree function callbacks (in H5HFbtree2.c) */ -H5_DLL herr_t H5HF_huge_bt2_indir_found(const void *nrecord, void *op_data); -H5_DLL herr_t H5HF_huge_bt2_indir_remove(const void *nrecord, void *op_data); -H5_DLL herr_t H5HF_huge_bt2_filt_indir_found(const void *nrecord, void *op_data); -H5_DLL herr_t H5HF_huge_bt2_filt_indir_remove(const void *nrecord, void *op_data); -H5_DLL herr_t H5HF_huge_bt2_dir_remove(const void *nrecord, void *op_data); -H5_DLL herr_t H5HF_huge_bt2_filt_dir_found(const void *nrecord, void *op_data); -H5_DLL herr_t H5HF_huge_bt2_filt_dir_remove(const void *nrecord, void *op_data); - /* Local 'huge' object support routines */ static hsize_t H5HF_huge_new_id(H5HF_hdr_t *hdr); static herr_t H5HF_huge_op_real(H5HF_hdr_t *hdr, hid_t dxpl_id, const uint8_t *id, hbool_t is_read, H5HF_operator_t op, void *op_data); + /*********************/ /* Package Variables */ /*********************/ diff --git a/src/H5HFiblock.c b/src/H5HFiblock.c index c0fa1e4..8969aae 100644 --- a/src/H5HFiblock.c +++ b/src/H5HFiblock.c @@ -35,6 +35,7 @@ /***********/ #include "H5private.h" /* Generic Functions */ #include "H5Eprivate.h" /* Error handling */ +#include "H5Fprivate.h" /* File access */ #include "H5HFpkg.h" /* Fractal heaps */ #include "H5MFprivate.h" /* File memory management */ #include "H5Vprivate.h" /* Vectors and arrays */ diff --git a/src/H5HFpkg.h b/src/H5HFpkg.h index 2997b3a..3fe3ad2 100644 --- a/src/H5HFpkg.h +++ b/src/H5HFpkg.h @@ -351,9 +351,9 @@ typedef struct H5HF_hdr_t { hbool_t huge_ids_direct; /* Flag to indicate that 'huge' object's offset & length are stored directly in heap ID */ size_t tiny_max_len; /* Max. size of tiny objects for this heap */ hbool_t tiny_len_extended; /* Flag to indicate that 'tiny' object's length is stored in extended form (i.e. w/extra byte) */ - unsigned char huge_id_size; /* Size of 'huge' heap IDs (in bytes) */ - unsigned char heap_off_size; /* Size of heap offsets (in bytes) */ - unsigned char heap_len_size; /* Size of heap ID lengths (in bytes) */ + uint8_t huge_id_size; /* Size of 'huge' heap IDs (in bytes) */ + uint8_t heap_off_size; /* Size of heap offsets (in bytes) */ + uint8_t heap_len_size; /* Size of heap ID lengths (in bytes) */ } H5HF_hdr_t; /* Common indirect block doubling table entry */ @@ -640,6 +640,15 @@ H5_DLL herr_t H5HF_huge_remove(H5HF_hdr_t *fh, hid_t dxpl_id, const uint8_t *id) H5_DLL herr_t H5HF_huge_term(H5HF_hdr_t *hdr, hid_t dxpl_id); H5_DLL herr_t H5HF_huge_delete(H5HF_hdr_t *hdr, hid_t dxpl_id); +/* 'Huge' object v2 B-tree function callbacks */ +H5_DLL herr_t H5HF_huge_bt2_indir_found(const void *nrecord, void *op_data); +H5_DLL herr_t H5HF_huge_bt2_indir_remove(const void *nrecord, void *op_data); +H5_DLL herr_t H5HF_huge_bt2_filt_indir_found(const void *nrecord, void *op_data); +H5_DLL herr_t H5HF_huge_bt2_filt_indir_remove(const void *nrecord, void *op_data); +H5_DLL herr_t H5HF_huge_bt2_dir_remove(const void *nrecord, void *op_data); +H5_DLL herr_t H5HF_huge_bt2_filt_dir_found(const void *nrecord, void *op_data); +H5_DLL herr_t H5HF_huge_bt2_filt_dir_remove(const void *nrecord, void *op_data); + /* 'Tiny' object routines */ H5_DLL herr_t H5HF_tiny_init(H5HF_hdr_t *hdr); H5_DLL herr_t H5HF_tiny_insert(H5HF_hdr_t *hdr, size_t obj_size, const void *obj, @@ -186,20 +186,18 @@ H5HG_create (H5F_t *f, hid_t dxpl_id, size_t size) heap->addr = addr; heap->size = size; - if (NULL==(heap->chunk = H5FL_BLK_MALLOC (gheap_chunk,size))) - HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, HADDR_UNDEF, \ - "memory allocation failed"); + if(NULL == (heap->chunk = H5FL_BLK_MALLOC(gheap_chunk, size))) + HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, HADDR_UNDEF, "memory allocation failed") #ifdef H5_CLEAR_MEMORY HDmemset(heap->chunk, 0, size); #endif /* H5_CLEAR_MEMORY */ - heap->nalloc = H5HG_NOBJS (f, size); + heap->nalloc = H5HG_NOBJS(f, size); heap->nused = 1; /* account for index 0, which is used for the free object */ - if (NULL==(heap->obj = H5FL_SEQ_MALLOC (H5HG_obj_t,heap->nalloc))) - HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, HADDR_UNDEF, \ - "memory allocation failed"); + if(NULL == (heap->obj = H5FL_SEQ_MALLOC(H5HG_obj_t, heap->nalloc))) + HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, HADDR_UNDEF, "memory allocation failed") /* Initialize the header */ - HDmemcpy (heap->chunk, H5HG_MAGIC, (size_t)H5_SIZEOF_MAGIC); + HDmemcpy(heap->chunk, H5HG_MAGIC, (size_t)H5_SIZEOF_MAGIC); p = heap->chunk + H5_SIZEOF_MAGIC; *p++ = H5HG_VERSION; *p++ = 0; /*reserved*/ diff --git a/src/H5HGcache.c b/src/H5HGcache.c index 22374ce..f3d0f3a 100644 --- a/src/H5HGcache.c +++ b/src/H5HGcache.c @@ -173,7 +173,8 @@ H5HG_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, const void UNUSED * udata1, nalloc = H5HG_NOBJS(f, heap->size); if(NULL == (heap->obj = H5FL_SEQ_MALLOC(H5HG_obj_t, nalloc))) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed") - heap->obj[0].size = heap->obj[0].nrefs = 0; + heap->obj[0].nrefs = 0; + heap->obj[0].size = 0; heap->obj[0].begin = NULL; heap->nalloc = nalloc; @@ -378,11 +378,11 @@ H5HP_create(H5HP_type_t heap_type) done: /* Error cleanup */ - if(ret_value==NULL) { - if(new_heap!=NULL) { - if(new_heap->heap!=NULL) - H5FL_SEQ_FREE(H5HP_ent_t,new_heap->heap); - (void)H5FL_FREE(H5HP_t,new_heap); + if(NULL ==ret_value) { + if(NULL != new_heap) { + if(NULL != new_heap->heap) + new_heap->heap = H5FL_SEQ_FREE(H5HP_ent_t, new_heap->heap); + new_heap = H5FL_FREE(H5HP_t, new_heap); } /* end if */ } /* end if */ @@ -772,20 +772,20 @@ H5HP_incr(H5HP_t *heap, unsigned amt, void *_obj) assert(heap->heap[0].obj==NULL); /* Get the location of the object in the heap */ - obj_loc=obj->heap_loc; - assert(obj_loc>0 && obj_loc<=heap->nobjs); + obj_loc = obj->heap_loc; + assert(obj_loc > 0 && obj_loc <= heap->nobjs); /* Change the heap object's priority */ - heap->heap[obj_loc].val+=amt; + heap->heap[obj_loc].val += (int)amt; /* Restore heap condition */ - if(heap->type==H5HP_MAX_HEAP) { - if(H5HP_swim_max(heap,obj_loc)<0) - HGOTO_ERROR(H5E_HEAP, H5E_CANTRESTORE, FAIL, "unable to restore heap condition"); + if(H5HP_MAX_HEAP == heap->type) { + if(H5HP_swim_max(heap, obj_loc) < 0) + HGOTO_ERROR(H5E_HEAP, H5E_CANTRESTORE, FAIL, "unable to restore heap condition") } /* end if */ else { - if(H5HP_sink_min(heap,obj_loc)<0) - HGOTO_ERROR(H5E_HEAP, H5E_CANTRESTORE, FAIL, "unable to restore heap condition"); + if(H5HP_sink_min(heap, obj_loc) < 0) + HGOTO_ERROR(H5E_HEAP, H5E_CANTRESTORE, FAIL, "unable to restore heap condition") } /* end else */ done: @@ -910,10 +910,10 @@ H5HP_close(H5HP_t *heap) HDassert(NULL == heap->heap[0].obj); /* Free internal structures for heap */ - H5FL_SEQ_FREE(H5HP_ent_t, heap->heap); + heap->heap = H5FL_SEQ_FREE(H5HP_ent_t, heap->heap); /* Free actual heap object */ - (void)H5FL_FREE(H5HP_t, heap); + heap = H5FL_FREE(H5HP_t, heap); FUNC_LEAVE_NOAPI(SUCCEED) } /* end H5HP_close() */ diff --git a/src/H5Lexternal.c b/src/H5Lexternal.c index 8637429..57414c7 100644 --- a/src/H5Lexternal.c +++ b/src/H5Lexternal.c @@ -482,7 +482,7 @@ H5L_extern_query(const char UNUSED * link_name, const void *_udata, size_t udata } /* end if */ /* Set return value */ - ret_value = udata_size; + ret_value = (ssize_t)udata_size; done: FUNC_LEAVE_NOAPI(ret_value) @@ -394,6 +394,7 @@ HDfprintf(stderr, "%s: Leaving: ret_value = %a, size = %Hu\n", FUNC, ret_value, #ifdef H5MF_ALLOC_DEBUG_DUMP H5MF_sects_dump(f, dxpl_id, stderr); #endif /* H5MF_ALLOC_DEBUG_DUMP */ + FUNC_LEAVE_NOAPI(ret_value) } /* end H5MF_alloc() */ diff --git a/src/H5MFaggr.c b/src/H5MFaggr.c index 0f8a374..fa5014bc 100644 --- a/src/H5MFaggr.c +++ b/src/H5MFaggr.c @@ -86,10 +86,6 @@ * Programmer: Quincey Koziol * Thursday, December 13, 2007 * - * Modifications: - * Vailin Choi, July 29th, 2008 - * The whole routine is modified to handle alignment - * *------------------------------------------------------------------------- */ haddr_t @@ -133,13 +129,13 @@ HDfprintf(stderr, "%s: aggr = {%a, %Hu, %Hu}\n", FUNC, aggr->addr, aggr->tot_siz #endif /* H5MF_AGGR_DEBUG */ alignment = f->shared->alignment; - if (!((alignment > 1) && (size >= f->shared->threshold))) + if(!((alignment > 1) && (size >= f->shared->threshold))) alignment = 0; /* no alignment */ - if (alignment && aggr->addr > 0 && aggr->size > 0 && (mis_align = aggr->addr % alignment)) { + if(alignment && aggr->addr > 0 && aggr->size > 0 && (mis_align = aggr->addr % alignment)) { frag_addr = aggr->addr; frag_size = alignment - mis_align; - } + } /* end if */ alloc_type = aggr->feature_flag == H5FD_FEAT_AGGREGATE_METADATA ? H5FD_MEM_DEFAULT : H5FD_MEM_DRAW; other_alloc_type = other_aggr->feature_flag == H5FD_FEAT_AGGREGATE_METADATA ? H5FD_MEM_DEFAULT : H5FD_MEM_DRAW; @@ -155,7 +151,7 @@ HDfprintf(stderr, "%s: aggr = {%a, %Hu, %Hu}\n", FUNC, aggr->addr, aggr->tot_siz if(H5F_addr_gt((aggr->addr + aggr->size + ext_size), f->shared->tmp_addr)) HGOTO_ERROR(H5E_RESOURCE, H5E_BADRANGE, HADDR_UNDEF, "'normal' file space allocation request will overlap into 'temporary' file space") - if ((aggr->addr > 0) && (extended=H5FD_try_extend(f->shared->lf, alloc_type, aggr->addr + aggr->size, ext_size)) < 0) + if ((aggr->addr > 0) && (extended = H5FD_try_extend(f->shared->lf, alloc_type, aggr->addr + aggr->size, ext_size)) < 0) HGOTO_ERROR(H5E_RESOURCE, H5E_CANTALLOC, HADDR_UNDEF, "can't extending space") else if (extended) { /* aggr->size is unchanged */ @@ -176,7 +172,7 @@ HDfprintf(stderr, "%s: aggr = {%a, %Hu, %Hu}\n", FUNC, aggr->addr, aggr->tot_siz other_aggr->addr = 0; other_aggr->tot_size = 0; other_aggr->size = 0; - } + } /* end if */ if(HADDR_UNDEF == (new_space = H5FD_alloc(f->shared->lf, dxpl_id, type, size, &eoa_frag_addr, &eoa_frag_size))) HGOTO_ERROR(H5E_VFL, H5E_CANTALLOC, HADDR_UNDEF, "can't allocate aggregation block") @@ -193,14 +189,14 @@ HDfprintf(stderr, "%s: aggr = {%a, %Hu, %Hu}\n", FUNC, aggr->addr, aggr->tot_siz HDfprintf(stderr, "%s: Allocating block\n", FUNC); #endif /* H5MF_AGGR_DEBUG */ - if (frag_size > (ext_size - size)) + if(frag_size > (ext_size - size)) ext_size += (frag_size - (ext_size - size)); /* Check for overlapping into file's temporary allocation space */ if(H5F_addr_gt((aggr->addr + aggr->size + ext_size), f->shared->tmp_addr)) HGOTO_ERROR(H5E_RESOURCE, H5E_BADRANGE, HADDR_UNDEF, "'normal' file space allocation request will overlap into 'temporary' file space") - if ((aggr->addr > 0) && (extended = H5FD_try_extend(f->shared->lf, alloc_type, aggr->addr + aggr->size, ext_size)) < 0) + if((aggr->addr > 0) && (extended = H5FD_try_extend(f->shared->lf, alloc_type, aggr->addr + aggr->size, ext_size)) < 0) HGOTO_ERROR(H5E_RESOURCE, H5E_CANTALLOC, HADDR_UNDEF, "can't extending space") else if (extended) { aggr->addr += frag_size; @@ -211,7 +207,7 @@ HDfprintf(stderr, "%s: Allocating block\n", FUNC); if(H5F_addr_gt((eoa + aggr->alloc_size), f->shared->tmp_addr)) HGOTO_ERROR(H5E_RESOURCE, H5E_BADRANGE, HADDR_UNDEF, "'normal' file space allocation request will overlap into 'temporary' file space") - if ((other_aggr->size > 0) && (H5F_addr_eq((other_aggr->addr + other_aggr->size), eoa)) && + if((other_aggr->size > 0) && (H5F_addr_eq((other_aggr->addr + other_aggr->size), eoa)) && ((other_aggr->tot_size - other_aggr->size) >= other_aggr->alloc_size)) { if(H5FD_free(f->shared->lf, dxpl_id, other_alloc_type, other_aggr->addr, other_aggr->size) < 0) @@ -219,7 +215,7 @@ HDfprintf(stderr, "%s: Allocating block\n", FUNC); other_aggr->addr = 0; other_aggr->tot_size = 0; other_aggr->size = 0; - } + } /* end if */ if(HADDR_UNDEF == (new_space = H5FD_alloc(f->shared->lf, dxpl_id, alloc_type, aggr->alloc_size, &eoa_frag_addr, &eoa_frag_size))) HGOTO_ERROR(H5E_VFL, H5E_CANTALLOC, HADDR_UNDEF, "can't allocate aggregation block") @@ -233,7 +229,6 @@ HDfprintf(stderr, "%s: Allocating block\n", FUNC); aggr->addr = new_space; aggr->size = aggr->alloc_size; aggr->tot_size = aggr->alloc_size; - } /* end else */ /* Allocate space out of the metadata block */ @@ -243,12 +238,12 @@ HDfprintf(stderr, "%s: Allocating block\n", FUNC); } /* end else */ /* freeing any possible fragment due to file allocation */ - if (eoa_frag_size) + if(eoa_frag_size) if(H5MF_xfree(f, type, dxpl_id, eoa_frag_addr, eoa_frag_size) < 0) HGOTO_ERROR(H5E_VFL, H5E_CANTFREE, HADDR_UNDEF, "can't free eoa fragment") /* freeing any possible fragment due to alignment in the block after extension */ - if (extended && frag_size) + if(extended && frag_size) if(H5MF_xfree(f, type, dxpl_id, frag_addr, frag_size) < 0) HGOTO_ERROR(H5E_VFL, H5E_CANTFREE, HADDR_UNDEF, "can't free aggregation fragment") } /* end if */ @@ -262,7 +257,7 @@ HDfprintf(stderr, "%s: Allocating block\n", FUNC); if (frag_size) if(H5MF_xfree(f, type, dxpl_id, frag_addr, frag_size) < 0) HGOTO_ERROR(H5E_VFL, H5E_CANTFREE, HADDR_UNDEF, "can't free aggregation fragment") - } + } /* end else */ } /* end if */ else { /* Check for overlapping into file's temporary allocation space */ @@ -272,7 +267,7 @@ HDfprintf(stderr, "%s: Allocating block\n", FUNC); /* Allocate data from the file */ if(HADDR_UNDEF == (ret_value = H5FD_alloc(f->shared->lf, dxpl_id, type, size, &eoa_frag_addr, &eoa_frag_size))) HGOTO_ERROR(H5E_RESOURCE, H5E_CANTALLOC, HADDR_UNDEF, "can't allocate file space") - if (eoa_frag_size) + if(eoa_frag_size) if(H5MF_xfree(f, type, dxpl_id, eoa_frag_addr, eoa_frag_size) < 0) HGOTO_ERROR(H5E_VFL, H5E_CANTFREE, HADDR_UNDEF, "can't free eoa fragment") } /* end else */ @@ -426,7 +421,7 @@ done: *------------------------------------------------------------------------- */ herr_t -H5MF_aggr_absorb(const H5F_t *f, H5F_blk_aggr_t *aggr, H5MF_free_section_t *sect, +H5MF_aggr_absorb(const H5F_t UNUSED *f, H5F_blk_aggr_t *aggr, H5MF_free_section_t *sect, hbool_t allow_sect_absorb) { FUNC_ENTER_NOAPI_NOFUNC(H5MF_aggr_absorb) @@ -549,7 +544,7 @@ herr_t H5MF_aggr_reset(H5F_t *f, hid_t dxpl_id, H5F_blk_aggr_t *aggr) { H5FD_mem_t alloc_type; /* Type of file memory to work with */ - herr_t ret_value = SUCCEED; /* Return value */ + herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI(H5MF_aggr_reset, FAIL) diff --git a/src/H5MFsection.c b/src/H5MFsection.c index 200195a..0dc43c3 100644 --- a/src/H5MFsection.c +++ b/src/H5MFsection.c @@ -528,4 +528,3 @@ done: FUNC_LEAVE_NOAPI((H5FS_section_info_t *)ret_value) } /* end H5MF_sect_simple_split() */ - @@ -1449,11 +1449,12 @@ H5O_link_oh(H5F_t *f, int adjust, hid_t dxpl_id, H5O_t *oh, unsigned *oh_flags) *oh_flags = H5AC__DELETED_FLAG | H5AC__FREE_FILE_SPACE_FLAG; } /* end else */ } /* end if */ - } else { + } /* end if */ + else { /* A new object, or one that will be deleted */ - if(oh->nlink == 0) { - /* Check if the object is current open, but marked for deletion */ - if(H5FO_marked(f, addr) > 0) { + if(0 == oh->nlink) { + /* Check if the object is currently open, but marked for deletion */ + if(H5FO_marked(f, addr)) { /* Remove "delete me" flag on the object */ if(H5FO_mark(f, addr, FALSE) < 0) HGOTO_ERROR(H5E_OHDR, H5E_CANTDELETE, FAIL, "can't mark object for deletion") @@ -1496,7 +1497,7 @@ H5O_link_oh(H5F_t *f, int adjust, hid_t dxpl_id, H5O_t *oh, unsigned *oh_flags) } /* end if */ /* Set return value */ - ret_value = oh->nlink; + ret_value = (int)oh->nlink; done: FUNC_LEAVE_NOAPI(ret_value); @@ -2934,5 +2935,3 @@ done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5O_visit() */ - - diff --git a/src/H5Oalloc.c b/src/H5Oalloc.c index b2d38da..6c8c931 100644 --- a/src/H5Oalloc.c +++ b/src/H5Oalloc.c @@ -163,7 +163,7 @@ H5O_add_gap(H5O_t *oh, unsigned chunkno, unsigned idx, /* Check if we need to extend message table to hold the new null message */ if(oh->nmesgs >= oh->alloc_nmesgs) if(H5O_alloc_msgs(oh, (size_t)1) < 0) - HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, UFAIL, "can't allocate more space for messages") + HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "can't allocate more space for messages") /* Increment new gap size */ oh->chunk[chunkno].gap += new_gap_size; @@ -329,7 +329,7 @@ H5O_alloc_null(H5O_t *oh, unsigned null_idx, const H5O_msg_class_t *new_type, /* Add the gap to the chunk */ if(H5O_add_gap(oh, alloc_msg->chunkno, null_idx, alloc_msg->raw + alloc_msg->raw_size, gap_size) < 0) - HGOTO_ERROR(H5E_OHDR, H5E_CANTINSERT, UFAIL, "can't insert gap in chunk") + HGOTO_ERROR(H5E_OHDR, H5E_CANTINSERT, FAIL, "can't insert gap in chunk") } /* end if */ else { size_t new_mesg_size = new_size + H5O_SIZEOF_MSGHDR_OH(oh); /* Total size of newly allocated message */ @@ -338,7 +338,7 @@ H5O_alloc_null(H5O_t *oh, unsigned null_idx, const H5O_msg_class_t *new_type, /* Check if we need to extend message table to hold the new null message */ if(oh->nmesgs >= oh->alloc_nmesgs) { if(H5O_alloc_msgs(oh, (size_t)1) < 0) - HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, UFAIL, "can't allocate more space for messages") + HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "can't allocate more space for messages") /* "Retarget" 'alloc_msg' pointer into newly re-allocated array of messages */ alloc_msg = &oh->mesg[null_idx]; @@ -361,7 +361,7 @@ H5O_alloc_null(H5O_t *oh, unsigned null_idx, const H5O_msg_class_t *new_type, if(H5O_eliminate_gap(oh, null_msg, ((oh->chunk[null_chunkno].image + oh->chunk[null_chunkno].size) - (H5O_SIZEOF_CHKSUM_OH(oh) + oh->chunk[null_chunkno].gap)), oh->chunk[null_chunkno].gap) < 0) - HGOTO_ERROR(H5E_OHDR, H5E_CANTREMOVE, UFAIL, "can't eliminate gap in chunk") + HGOTO_ERROR(H5E_OHDR, H5E_CANTREMOVE, FAIL, "can't eliminate gap in chunk") /* Set the gap size to zero for the chunk */ oh->chunk[null_chunkno].gap = 0; diff --git a/src/H5Ocache.c b/src/H5Ocache.c index d396896..c0c1bfa 100644 --- a/src/H5Ocache.c +++ b/src/H5Ocache.c @@ -509,7 +509,7 @@ H5O_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, const void UNUSED * _udata1, HDassert(nullcnt == 0); /* Set gap information for chunk */ - oh->chunk[chunkno].gap = (eom_ptr - p); + oh->chunk[chunkno].gap = (size_t)(eom_ptr - p); /* Increment location in chunk */ p += oh->chunk[chunkno].gap; diff --git a/src/H5Ocopy.c b/src/H5Ocopy.c index 2926c6b..807d147 100644 --- a/src/H5Ocopy.c +++ b/src/H5Ocopy.c @@ -543,7 +543,7 @@ H5O_copy_header_real(const H5O_loc_t *oloc_src, H5O_loc_t *oloc_dst /*out */, /* Check if the chunk's data portion is too small */ dst_oh_gap = dst_oh_null = 0; if(dst_oh_size < H5O_MIN_SIZE) { - size_t delta = (H5O_MIN_SIZE - dst_oh_size); /* Delta in chunk size needed */ + size_t delta = (size_t)(H5O_MIN_SIZE - dst_oh_size); /* Delta in chunk size needed */ /* Sanity check */ HDassert((oh_dst->flags & H5O_HDR_CHUNK0_SIZE) == H5O_HDR_CHUNK0_1); diff --git a/src/H5Odtype.c b/src/H5Odtype.c index 83dbabc..a9812690 100644 --- a/src/H5Odtype.c +++ b/src/H5Odtype.c @@ -579,8 +579,8 @@ done: if(ret_value < 0) { if(dt != NULL) { if(dt->shared != NULL) - H5FL_FREE(H5T_shared_t, dt->shared); - H5FL_FREE(H5T_t, dt); + dt->shared = H5FL_FREE(H5T_shared_t, dt->shared); + dt = H5FL_FREE(H5T_t, dt); } /* end if */ } /* end if */ diff --git a/src/H5Pfcpl.c b/src/H5Pfcpl.c index a7956e7..4d576c6 100644 --- a/src/H5Pfcpl.c +++ b/src/H5Pfcpl.c @@ -758,15 +758,15 @@ H5Pset_shared_mesg_index(hid_t plist_id, unsigned index_num, unsigned mesg_type_ /* Check arguments */ if(mesg_type_flags > H5O_SHMESG_ALL_FLAG) - HGOTO_ERROR(H5E_ARGS, H5E_BADRANGE, FAIL, "unrecognized flags in mesg_type_flags"); + HGOTO_ERROR(H5E_ARGS, H5E_BADRANGE, FAIL, "unrecognized flags in mesg_type_flags") /* Get the plist structure */ if(NULL == (plist = H5P_object_verify(plist_id,H5P_FILE_CREATE))) - HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID"); + HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") /* Read the current number of indexes */ if(H5P_get(plist, H5F_CRT_SHMSG_NINDEXES_NAME, &nindexes) < 0) - HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get number of indexes"); + HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get number of indexes") /* Range check */ if(index_num >= nindexes) @@ -784,9 +784,9 @@ H5Pset_shared_mesg_index(hid_t plist_id, unsigned index_num, unsigned mesg_type_ /* Write arrays back to plist */ if(H5P_set(plist, H5F_CRT_SHMSG_INDEX_TYPES_NAME, type_flags) < 0) - HGOTO_ERROR(H5E_PLIST, H5E_CANTSET, FAIL, "can't set index type flags"); + HGOTO_ERROR(H5E_PLIST, H5E_CANTSET, FAIL, "can't set index type flags") if(H5P_set(plist, H5F_CRT_SHMSG_INDEX_MINSIZE_NAME, minsizes) < 0) - HGOTO_ERROR(H5E_PLIST, H5E_CANTSET, FAIL, "can't set min mesg sizes"); + HGOTO_ERROR(H5E_PLIST, H5E_CANTSET, FAIL, "can't set min mesg sizes") done: FUNC_LEAVE_API(ret_value) @@ -845,7 +845,7 @@ H5Pget_shared_mesg_index(hid_t plist_id, unsigned index_num, unsigned *mesg_type done: FUNC_LEAVE_API(ret_value); -} +} /* end H5Pset_shared_mesg_index() */ /*------------------------------------------------------------------------- @@ -905,7 +905,7 @@ H5Pset_shared_mesg_phase_change(hid_t plist_id, unsigned max_list, unsigned min_ done: FUNC_LEAVE_API(ret_value); -} +} /* end H5Pset_shared_mesg_phase_change() */ /*------------------------------------------------------------------------- @@ -946,5 +946,5 @@ H5Pget_shared_mesg_phase_change(hid_t plist_id, unsigned *max_list, unsigned *mi done: FUNC_LEAVE_API(ret_value); -} +} /* end H5Pget_shared_mesg_phase_change() */ diff --git a/test/freespace.c b/test/freespace.c index 79a0864..29a1dc2 100644 --- a/test/freespace.c +++ b/test/freespace.c @@ -2791,3 +2791,4 @@ error: } H5E_END_TRY; return (1); } /* main() */ + @@ -2824,8 +2824,9 @@ test_mf_aggr_alloc6(const char *env_h5_drvr, hid_t fapl) if(NULL == (f = (H5F_t *)H5I_object(file))) FAIL_STACK_ERROR - /* Allocate first block from meta_aggr */ type = H5FD_MEM_SUPER; + + /* Allocate first block from meta_aggr */ addr1 = H5MF_alloc(f, type, H5P_DATASET_XFER_DEFAULT, (hsize_t)TEST_BLOCK_SIZE30); H5MF_aggr_query(f, &(f->shared->meta_aggr), &ma_addr, &ma_size); @@ -5798,11 +5799,11 @@ error: int main(void) { - hid_t fapl = -1; /* File access property list for data files */ - hid_t new_fapl = -1; /* File access property list for alignment & aggr setting */ - unsigned nerrors = 0; /* Cumulative error count */ - test_type_t curr_test; - const char *env_h5_drvr; /* File Driver value from environment */ + hid_t fapl = -1; /* File access property list for data files */ + hid_t new_fapl = -1; /* File access property list for alignment & aggr setting */ + unsigned nerrors = 0; /* Cumulative error count */ + test_type_t curr_test; /* Current test being worked on */ + const char *env_h5_drvr; /* File Driver value from environment */ /* Get the VFD to use */ env_h5_drvr = HDgetenv("HDF5_DRIVER"); @@ -5849,10 +5850,7 @@ main(void) nerrors += test_mf_aggr_extend(env_h5_drvr, fapl); nerrors += test_mf_aggr_absorb(env_h5_drvr, fapl); - /* - * tests for alignment - */ - + /* Tests for alignment */ for(curr_test = TEST_NORMAL; curr_test < TEST_NTESTS; curr_test++) { switch(curr_test) { @@ -5869,6 +5867,7 @@ main(void) default: TEST_ERROR; + break; } /* end switch */ nerrors += test_mf_align_eoa(env_h5_drvr, fapl, new_fapl); diff --git a/tools/h5dump/h5dump.c b/tools/h5dump/h5dump.c index a8b6832..beacdbb 100644 --- a/tools/h5dump/h5dump.c +++ b/tools/h5dump/h5dump.c @@ -731,10 +731,11 @@ table_list_add(hid_t oid, unsigned long file_no) { size_t idx; /* Index of table to use */ find_objs_t info; - void *tmp_ptr; /* Allocate space if necessary */ if(table_list.nused == table_list.nalloc) { + void *tmp_ptr; + table_list.nalloc = MAX(1, table_list.nalloc * 2); if(NULL == (tmp_ptr = HDrealloc(table_list.tables, table_list.nalloc * sizeof(table_list.tables[0])))) return -1; @@ -1441,7 +1442,7 @@ dump_selected_attr(hid_t loc_id, const char *name) int j; j = (int)HDstrlen(name) - 1; - obj_name = HDmalloc((size_t)j + 2); + obj_name = (char *)HDmalloc((size_t)j + 2); /* find the last / */ while(name[j] != '/' && j >= 0) @@ -1533,7 +1534,7 @@ dump_all_cb(hid_t group, const char *name, const H5L_info_t *linfo, void UNUSED herr_t ret = SUCCEED; /* Build the object's path name */ - obj_path = HDmalloc(HDstrlen(prefix) + HDstrlen(name) + 2); + obj_path = (char *)HDmalloc(HDstrlen(prefix) + HDstrlen(name) + 2); HDassert(obj_path); HDstrcpy(obj_path, prefix); HDstrcat(obj_path, "/"); @@ -1692,7 +1693,7 @@ dump_all_cb(hid_t group, const char *name, const H5L_info_t *linfo, void UNUSED switch(linfo->type) { case H5L_TYPE_SOFT: indentation(indent); - targbuf = HDmalloc(linfo->u.val_size); + targbuf = (char *)HDmalloc(linfo->u.val_size); HDassert(targbuf); if(!doxml) { @@ -1722,7 +1723,7 @@ dump_all_cb(hid_t group, const char *name, const H5L_info_t *linfo, void UNUSED char *t_link_path; int res; - t_link_path = HDmalloc(HDstrlen(prefix) + linfo->u.val_size + 1); + t_link_path = (char *)HDmalloc(HDstrlen(prefix) + linfo->u.val_size + 1); if(targbuf[0] == '/') HDstrcpy(t_link_path, targbuf); else { @@ -1785,7 +1786,7 @@ dump_all_cb(hid_t group, const char *name, const H5L_info_t *linfo, void UNUSED break; case H5L_TYPE_EXTERNAL: - targbuf = HDmalloc(linfo->u.val_size); + targbuf = (char *)HDmalloc(linfo->u.val_size); HDassert(targbuf); indentation(indent); @@ -2057,7 +2058,7 @@ dump_group(hid_t gid, const char *name) } - tmp = HDmalloc(HDstrlen(prefix) + HDstrlen(name) + 2); + tmp = (char *)HDmalloc(HDstrlen(prefix) + HDstrlen(name) + 2); HDstrcpy(tmp, prefix); indentation(indent); begin_obj(dump_header_format->groupbegin, name, dump_header_format->groupblockbegin); @@ -2714,9 +2715,7 @@ dump_dcpl(hid_t dcpl_id,hid_t type_id, hid_t obj_id) hsize_t dims[H5S_MAX_RANK]; int ndims = H5Sget_simple_extent_dims( sid, dims, NULL); hsize_t nelmts = 1; - hsize_t size; double ratio = 0; - hssize_t a, b; int ok = 0; /* only print the compression ratio for these filters */ @@ -2739,19 +2738,18 @@ dump_dcpl(hid_t dcpl_id,hid_t type_id, hid_t obj_id) if (ndims && ok ) { + hsize_t uncomp_size; for (i = 0; i < ndims; i++) { nelmts *= dims[i]; } - size = nelmts * datum_size; - - a = size; b = storage_size; + uncomp_size = nelmts * datum_size; /* compression ratio = uncompressed size / compressed size */ - if (b!=0) - ratio = (double) a / (double) b; + if (storage_size != 0) + ratio = (double) uncomp_size / (double) storage_size; HDfprintf(stdout, "SIZE %Hu (%.3f:1 COMPRESSION)\n ", storage_size, ratio); diff --git a/tools/h5repack/h5repack_copy.c b/tools/h5repack/h5repack_copy.c index 73f57e3..0fb8fc8 100644 --- a/tools/h5repack/h5repack_copy.c +++ b/tools/h5repack/h5repack_copy.c @@ -930,16 +930,12 @@ int do_copy_objects(hid_t fidin, /* only print the compression ration if there was a filter request */ if (apply_s && apply_f && req_filter) { - hssize_t a, b; - /* get the storage size of the output dataset */ dsize_out=H5Dget_storage_size(dset_out); /* compression ratio = uncompressed size / compressed size */ - - a = dsize_in; b = dsize_out; - if (b!=0) - ratio = (double) a / (double) b; + if (dsize_out!=0) + ratio = (double) dsize_in / (double) dsize_out; print_dataset_info(dcpl_out,travt->objs[i].name,ratio,1); } diff --git a/tools/h5repack/h5repack_main.c b/tools/h5repack/h5repack_main.c index f55bd2e..d9ec7ad 100644 --- a/tools/h5repack/h5repack_main.c +++ b/tools/h5repack/h5repack_main.c @@ -411,13 +411,12 @@ void parse_command_line(int argc, const char **argv, pack_opt_t* options) case 'b': - options->ublock_size = atol( opt_arg ); + options->ublock_size = (hsize_t)atol( opt_arg ); break; case 't': - options->threshold = atol( opt_arg ); - + options->threshold = (hsize_t)atol( opt_arg ); break; case 'a': diff --git a/tools/h5repack/h5repacktst.c b/tools/h5repack/h5repacktst.c index b36afde..d28750c 100644 --- a/tools/h5repack/h5repacktst.c +++ b/tools/h5repack/h5repacktst.c @@ -1507,7 +1507,6 @@ int main (void) SKIPPED(); #endif - /*------------------------------------------------------------------------- * test file with userblock *------------------------------------------------------------------------- @@ -1529,8 +1528,6 @@ int main (void) PASSED(); - - /*------------------------------------------------------------------------- * clean temporary test files *------------------------------------------------------------------------- diff --git a/tools/h5stat/h5stat.c b/tools/h5stat/h5stat.c index 315c558..75481ff 100644 --- a/tools/h5stat/h5stat.c +++ b/tools/h5stat/h5stat.c @@ -51,7 +51,7 @@ typedef struct iter_t { unsigned long uniq_groups; /* Number of unique groups */ unsigned long uniq_dsets; /* Number of unique datasets */ - unsigned long uniq_types; /* Number of unique named datatypes */ + unsigned long uniq_dtypes; /* Number of unique named datatypes */ unsigned long uniq_links; /* Number of unique links */ unsigned long uniq_others; /* Number of other unique objects */ @@ -64,11 +64,11 @@ typedef struct iter_t { hsize_t max_attrs; /* Maximum attributes from a group */ unsigned long num_small_attrs[SIZE_SMALL_ATTRS]; /* Size of small attributes tracked */ - unsigned attr_nbins; - unsigned long *attr_bins; + unsigned attr_nbins; /* Number of bins for attribute counts */ + unsigned long *attr_bins; /* Pointer to array of bins for attribute counts */ - unsigned long max_dset_rank; /* Maximum rank of dataset */ - unsigned long dset_rank_count[H5S_MAX_RANK]; /* Number of datasets of each rank */ + unsigned max_dset_rank; /* Maximum rank of dataset */ + unsigned long dset_rank_count[H5S_MAX_RANK]; /* Number of datasets of each rank */ hsize_t max_dset_dims; /* Maximum dimension size of dataset */ unsigned long small_dset_dims[SIZE_SMALL_DSETS]; /* Size of dimensions of small datasets tracked */ unsigned long dset_layouts[H5D_NLAYOUTS]; /* Type of storage for each dataset */ @@ -79,6 +79,7 @@ typedef struct iter_t { unsigned long *dset_dim_bins; /* Pointer to array of bins for dataset dimensions */ ohdr_info_t dset_ohdr_info; /* Object header information for datasets */ hsize_t dset_storage_size; /* Size of raw data for datasets */ + ohdr_info_t dtype_ohdr_info; /* Object header information for datatypes */ hsize_t groups_btree_storage_size; /* btree size for group */ hsize_t groups_heap_storage_size; /* heap size for group */ hsize_t attrs_btree_storage_size; /* btree size for attributes (1.8) */ @@ -110,7 +111,7 @@ struct handler_t { }; -static const char *s_opts ="AFfhGgDdTO:V"; +static const char *s_opts ="ADdFfhGgTO:V"; static struct long_options l_opts[] = { {"help", no_arg, 'h'}, {"hel", no_arg, 'h'}, @@ -192,13 +193,6 @@ leave(int ret) static void usage(const char *prog) { fflush(stdout); - fprintf(stdout, "\n"); - fprintf(stdout, "This tool is under development. For detailed information\n"); - fprintf(stdout, "please see the specification document at\n"); - fprintf(stdout, "http://hdf.ncsa.uiuc.edu/RFC/h5stat/h5stat-spec.pdf\n"); - fprintf(stdout, "\n"); - fprintf(stdout, "Please send your comments and questions to help@hdfgroup.org\n"); - fprintf(stdout, "\n"); fprintf(stdout, "Usage: %s [OPTIONS] file\n", prog); fprintf(stdout, "\n"); fprintf(stdout, " OPTIONS\n"); @@ -277,7 +271,7 @@ attribute_stats(iter_t *iter, const H5O_info_t *oi) /* Add attribute count to proper bin */ bin = ceil_log10((unsigned long)oi->num_attrs); if((bin + 1) > iter->attr_nbins) { - iter->attr_bins = realloc(iter->attr_bins, (bin + 1) * sizeof(unsigned long)); + iter->attr_bins = (unsigned long *)realloc(iter->attr_bins, (bin + 1) * sizeof(unsigned long)); assert(iter->attr_bins); /* Initialize counts for intermediate bins */ @@ -349,7 +343,7 @@ group_stats(iter_t *iter, const char *name, const H5O_info_t *oi) bin = ceil_log10((unsigned long)ginfo.nlinks); if((bin + 1) > iter->group_nbins) { /* Allocate more storage for info about dataset's datatype */ - iter->group_bins = realloc(iter->group_bins, (bin + 1) * sizeof(unsigned long)); + iter->group_bins = (unsigned long *)realloc(iter->group_bins, (bin + 1) * sizeof(unsigned long)); assert(iter->group_bins); /* Initialize counts for intermediate bins */ @@ -451,7 +445,7 @@ dataset_stats(iter_t *iter, const char *name, const H5O_info_t *oi) /* Check for larger rank of dataset */ if((unsigned)ndims > iter->max_dset_rank) - iter->max_dset_rank = ndims; + iter->max_dset_rank = (unsigned)ndims; /* Track the number of datasets with each rank */ (iter->dset_rank_count[ndims])++; @@ -466,7 +460,7 @@ dataset_stats(iter_t *iter, const char *name, const H5O_info_t *oi) bin = ceil_log10((unsigned long)dims[0]); if((bin + 1) > iter->dset_dim_nbins) { /* Allocate more storage for info about dataset's datatype */ - iter->dset_dim_bins = realloc(iter->dset_dim_bins, (bin + 1) * sizeof(unsigned long)); + iter->dset_dim_bins = (unsigned long *)realloc(iter->dset_dim_bins, (bin + 1) * sizeof(unsigned long)); assert(iter->dset_dim_bins); /* Initialize counts for intermediate bins */ @@ -503,7 +497,7 @@ dataset_stats(iter_t *iter, const char *name, const H5O_info_t *oi) iter->dset_ntypes++; /* Allocate more storage for info about dataset's datatype */ - iter->dset_type_info = realloc(iter->dset_type_info, iter->dset_ntypes * sizeof(dtype_info_t)); + iter->dset_type_info = (dtype_info_t *)realloc(iter->dset_type_info, iter->dset_ntypes * sizeof(dtype_info_t)); assert(iter->dset_type_info); /* Initialize information about datatype */ @@ -537,7 +531,7 @@ dataset_stats(iter_t *iter, const char *name, const H5O_info_t *oi) assert (num_ext >= 0); if(num_ext) - iter->nexternal = iter->nexternal + num_ext; + iter->nexternal += (unsigned long)num_ext; /* Track different filters */ if((nfltr = H5Pget_nfilters(dcpl)) >= 0) { @@ -561,6 +555,31 @@ dataset_stats(iter_t *iter, const char *name, const H5O_info_t *oi) return 0; } /* end dataset_stats() */ +/*------------------------------------------------------------------------- + * Function: datatype_stats + * + * Purpose: Gather statistics about the datatype + * + * Return: Success: 0 + * Failure: -1 + * + * Programmer: Vailin Choi; July 7th, 2009 + * + *------------------------------------------------------------------------- + */ +static herr_t +datatype_stats(iter_t *iter, const H5O_info_t *oi) +{ + /* Gather statistics about this type of object */ + iter->uniq_dtypes++; + + /* Get object header information */ + iter->dtype_ohdr_info.total_size += oi->hdr.space.total; + iter->dtype_ohdr_info.free_size += oi->hdr.space.free; + + return 0; +} /* end datatype_stats() */ + /*------------------------------------------------------------------------- * Function: obj_stats @@ -598,8 +617,7 @@ obj_stats(const char *path, const H5O_info_t *oi, const char *already_visited, break; case H5O_TYPE_NAMED_DATATYPE: - /* Gather statistics about this type of object */ - iter->uniq_types++; + datatype_stats(iter, oi); break; default: @@ -661,10 +679,6 @@ lnk_stats(const char UNUSED *path, const H5L_info_t *li, void *_iter) * Programmer: Elena Pourmal * Saturday, August 12, 2006 * - * Modifications: - * Vailin Choi 12 July 2007 - * Added 'A' option to display attribute info - * *------------------------------------------------------------------------- */ static struct handler_t * @@ -674,7 +688,7 @@ parse_command_line(int argc, const char *argv[]) struct handler_t *hand; /* Allocate space to hold the command line info */ - hand = calloc((size_t)argc, sizeof(struct handler_t)); + hand = (struct handler_t *)calloc((size_t)argc, sizeof(struct handler_t)); /* parse command line options */ while ((opt = get_option(argc, argv, s_opts, l_opts)) != EOF) { @@ -801,7 +815,7 @@ print_file_info(const iter_t *iter) printf("File information\n"); printf("\t# of unique groups: %lu\n", iter->uniq_groups); printf("\t# of unique datasets: %lu\n", iter->uniq_dsets); - printf("\t# of unique named dataypes: %lu\n", iter->uniq_types); + printf("\t# of unique named dataypes: %lu\n", iter->uniq_dtypes); printf("\t# of unique links: %lu\n", iter->uniq_links); printf("\t# of unique other: %lu\n", iter->uniq_others); printf("\tMax. # of links to object: %lu\n", iter->max_links); @@ -823,14 +837,6 @@ print_file_info(const iter_t *iter) * Programmer: Elena Pourmal * Saturday, August 12, 2006 * - * Modifications: - * Vailin Choi 12 July 2007 - * Print storage info for: - * 1. btree/heap storage for groups and attributes - * 2. btree storage for chunked dataset - * 3. hdr/btree/list/heap storage for SOHM table - * 4. superblock extension size - * *------------------------------------------------------------------------- */ static herr_t @@ -841,6 +847,8 @@ print_file_metadata(const iter_t *iter) iter->group_ohdr_info.free_size); HDfprintf(stdout, "\tDatasets: %Hu/%Hu\n", iter->dset_ohdr_info.total_size, iter->dset_ohdr_info.free_size); + HDfprintf(stdout, "\tDatatypes: %Hu/%Hu\n", iter->dtype_ohdr_info.total_size, + iter->dtype_ohdr_info.free_size); printf("Storage information:\n"); HDfprintf(stdout, "\tGroups:\n"); @@ -999,7 +1007,7 @@ print_dataset_info(const iter_t *iter) if(iter->uniq_dsets > 0) { printf("Dataset dimension information:\n"); - printf("\tMax. rank of datasets: %lu\n", iter->max_dset_rank); + printf("\tMax. rank of datasets: %u\n", iter->max_dset_rank); printf("\tDataset ranks:\n"); for(u = 0; u < H5S_MAX_RANK; u++) if(iter->dset_rank_count[u] > 0) @@ -1091,8 +1099,6 @@ print_dataset_info(const iter_t *iter) * Programmer: Elena Pourmal * Saturday, August 12, 2006 * - * Modifications: - * *------------------------------------------------------------------------- */ static void @@ -1163,15 +1169,6 @@ print_statistics(const char *name, const iter_t *iter) print_file_statistics(iter); } -/*------------------------------------------------------------------------- - * - * Modifications: - * bug #1253; Oct 6th 2008; Vailin Choi - * Call print_statistics() when objects/links are successfully traversed. - * Otherwise, return warning message. - * - *------------------------------------------------------------------------- - */ int main(int argc, const char *argv[]) diff --git a/tools/h5stat/testfiles/h5stat_filters-F.ddl b/tools/h5stat/testfiles/h5stat_filters-F.ddl index 544d0c7..6bc6cc2 100644 --- a/tools/h5stat/testfiles/h5stat_filters-F.ddl +++ b/tools/h5stat/testfiles/h5stat_filters-F.ddl @@ -5,6 +5,7 @@ Filename: h5stat_filters.h5 Object header size: (total/unused) Groups: 48/8 Datasets: 4936/1344 + Datatypes: 80/0 Storage information: Groups: B-tree/List: 1200 diff --git a/tools/h5stat/testfiles/h5stat_filters.ddl b/tools/h5stat/testfiles/h5stat_filters.ddl index 8afdf82..8243a23 100644 --- a/tools/h5stat/testfiles/h5stat_filters.ddl +++ b/tools/h5stat/testfiles/h5stat_filters.ddl @@ -13,6 +13,7 @@ File information Object header size: (total/unused) Groups: 48/8 Datasets: 4936/1344 + Datatypes: 80/0 Storage information: Groups: B-tree/List: 1200 diff --git a/tools/h5stat/testfiles/h5stat_help1.ddl b/tools/h5stat/testfiles/h5stat_help1.ddl index 0841572..0a86b4c 100644 --- a/tools/h5stat/testfiles/h5stat_help1.ddl +++ b/tools/h5stat/testfiles/h5stat_help1.ddl @@ -1,13 +1,6 @@ ############################# Expected output for 'h5stat -h' ############################# - -This tool is under development. For detailed information -please see the specification document at -http://hdf.ncsa.uiuc.edu/RFC/h5stat/h5stat-spec.pdf - -Please send your comments and questions to help@hdfgroup.org - Usage: h5stat [OPTIONS] file OPTIONS diff --git a/tools/h5stat/testfiles/h5stat_help2.ddl b/tools/h5stat/testfiles/h5stat_help2.ddl index 1e6295b..e41eb9e 100644 --- a/tools/h5stat/testfiles/h5stat_help2.ddl +++ b/tools/h5stat/testfiles/h5stat_help2.ddl @@ -1,13 +1,6 @@ ############################# Expected output for 'h5stat --help' ############################# - -This tool is under development. For detailed information -please see the specification document at -http://hdf.ncsa.uiuc.edu/RFC/h5stat/h5stat-spec.pdf - -Please send your comments and questions to help@hdfgroup.org - Usage: h5stat [OPTIONS] file OPTIONS diff --git a/tools/h5stat/testfiles/h5stat_newgrat.ddl b/tools/h5stat/testfiles/h5stat_newgrat.ddl index 5ba2e7f..f87f297 100644 --- a/tools/h5stat/testfiles/h5stat_newgrat.ddl +++ b/tools/h5stat/testfiles/h5stat_newgrat.ddl @@ -13,6 +13,7 @@ File information Object header size: (total/unused) Groups: 5145147/3220092 Datasets: 414/312 + Datatypes: 0/0 Storage information: Groups: B-tree/List: 470054 diff --git a/tools/h5stat/testfiles/h5stat_tsohm.ddl b/tools/h5stat/testfiles/h5stat_tsohm.ddl index 56524e1..577dfdd 100644 --- a/tools/h5stat/testfiles/h5stat_tsohm.ddl +++ b/tools/h5stat/testfiles/h5stat_tsohm.ddl @@ -13,6 +13,7 @@ File information Object header size: (total/unused) Groups: 51/2 Datasets: 852/447 + Datatypes: 0/0 Storage information: Groups: B-tree/List: 872 |