diff options
| -rw-r--r-- | MANIFEST | 1 | ||||
| -rw-r--r-- | release_docs/RELEASE.txt | 11 | ||||
| -rw-r--r-- | tools/h5diff/CMakeTests.cmake | 7 | ||||
| -rw-r--r-- | tools/h5diff/testfiles/h5diff_vlstr.txt | 16 | ||||
| -rw-r--r-- | tools/h5diff/testh5diff.sh.in | 4 | ||||
| -rw-r--r-- | tools/lib/h5diff_array.c | 20 |
6 files changed, 53 insertions, 6 deletions
@@ -2021,6 +2021,7 @@ ./tools/h5diff/testfiles/h5diff_udfail.txt ./tools/h5diff/testfiles/diff_strings1.h5 ./tools/h5diff/testfiles/diff_strings2.h5 +./tools/h5diff/testfiles/h5diff_vlstr.txt #test files for h5repack ./tools/h5repack/testfiles/README diff --git a/release_docs/RELEASE.txt b/release_docs/RELEASE.txt index 792e5b2..cd9a1f5 100644 --- a/release_docs/RELEASE.txt +++ b/release_docs/RELEASE.txt @@ -92,7 +92,7 @@ New Features Support for New Platforms, Languages, and Compilers =================================================== - + Bug Fixes since HDF5-1.8.19 @@ -120,7 +120,14 @@ Bug Fixes since HDF5-1.8.19 Tools ----- - - None + - h5diff + + h5diff segfaulted on compare of a NULL variable length string. + + Improved h5diff compare of strings by adding a check for + NULL strings and setting the lengths to zero. + + (ADB - 2017/07/25, HDFFV-10246) Fortran API diff --git a/tools/h5diff/CMakeTests.cmake b/tools/h5diff/CMakeTests.cmake index 7f6f8c3..e97b78c 100644 --- a/tools/h5diff/CMakeTests.cmake +++ b/tools/h5diff/CMakeTests.cmake @@ -66,6 +66,8 @@ ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/tudfilter2.h5 ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/diff_strings1.h5 ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/diff_strings2.h5 + # tools/testfiles + ${HDF5_TOOLS_DIR}/testfiles/tvlstr.h5 ) set (LIST_OTHER_TEST_FILES @@ -276,6 +278,8 @@ HDFTEST_COPY_FILE("${h5_tstfiles}" "${PROJECT_BINARY_DIR}/PAR/testfiles/${fname}" "h5diff_files") endif () endforeach () + # copy second version of tvlstr.h5 + HDFTEST_COPY_FILE("${HDF5_TOOLS_DIR}/testfiles/tvlstr.h5" "${PROJECT_BINARY_DIR}/testfiles/tvlstr2.h5" "h5diff_files") # @@ -839,6 +843,8 @@ h5diff_801.out.err h5diff_90.out h5diff_90.out.err + h5diff_vlstr.out + h5diff_vlstr.out.err ) set_tests_properties (H5DIFF-clearall-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles") if (NOT "${last_test}" STREQUAL "") @@ -1403,6 +1409,7 @@ ADD_H5_TEST (h5diff_487 1 -v --exclude-path "/group1/dset" h5diff_exclude3-1.h5 # # diff various multiple vlen and fixed strings in a compound type dataset # ############################################################################## ADD_H5_TEST (h5diff_530 0 -v ${COMP_VL_STRS_FILE} ${COMP_VL_STRS_FILE} /group /group_copy) +ADD_H5_TEST (h5diff_vlstr 0 -v tvlstr.h5 tvlstr2.h5) # ############################################################################## # # Test container types (array,vlen) with multiple nested compound types diff --git a/tools/h5diff/testfiles/h5diff_vlstr.txt b/tools/h5diff/testfiles/h5diff_vlstr.txt new file mode 100644 index 0000000..67141f1 --- /dev/null +++ b/tools/h5diff/testfiles/h5diff_vlstr.txt @@ -0,0 +1,16 @@ + +file1 file2 +--------------------------------------- + x x / + x x /Dataset1 + x x /vl_string_type + +group : </> and </> +0 differences found +attribute: <test_scalar of </>> and <test_scalar of </>> +0 differences found +dataset: </Dataset1> and </Dataset1> +0 differences found +datatype: </vl_string_type> and </vl_string_type> +0 differences found +EXIT CODE: 0 diff --git a/tools/h5diff/testh5diff.sh.in b/tools/h5diff/testh5diff.sh.in index 45a7a45..c21cbd7 100644 --- a/tools/h5diff/testh5diff.sh.in +++ b/tools/h5diff/testh5diff.sh.in @@ -120,6 +120,7 @@ $SRC_H5DIFF_TESTFILES/non_comparables1.h5 $SRC_H5DIFF_TESTFILES/non_comparables2.h5 $SRC_H5DIFF_TESTFILES/diff_strings1.h5 $SRC_H5DIFF_TESTFILES/diff_strings2.h5 +$SRC_TOOLS_TESTFILES/tvlstr.h5 " LIST_OTHER_TEST_FILES=" @@ -522,6 +523,8 @@ SKIP() { ############################################################################## # prepare for test COPY_TESTFILES_TO_TESTDIR +# second copy of tvlstr.h5 +$CP -f $SRC_TOOLS_TESTFILES/tvlstr.h5 $TESTDIR/tvlstr2.h5 # ############################################################################ # # Common usage @@ -1097,6 +1100,7 @@ TOOLTEST h5diff_487.txt -v --exclude-path "/group1/dset" h5diff_exclude3-1.h5 h5 # # diff various multiple vlen and fixed strings in a compound type dataset # ############################################################################## TOOLTEST h5diff_530.txt -v h5diff_comp_vl_strs.h5 h5diff_comp_vl_strs.h5 /group /group_copy +TOOLTEST h5diff_vlstr.txt -v tvlstr.h5 tvlstr2.h5 # ############################################################################## # # Test container types (array,vlen) with multiple nested compound types diff --git a/tools/lib/h5diff_array.c b/tools/lib/h5diff_array.c index 1b17382..6480cf6 100644 --- a/tools/lib/h5diff_array.c +++ b/tools/lib/h5diff_array.c @@ -674,21 +674,33 @@ static hsize_t diff_datum(void *_mem1, h5difftrace("diff_datum H5T_STRING variable\n"); /* Get pointer to first string */ s1 = *(char**) mem1; - size1 = HDstrlen(s1); + if(s1) + size1 = HDstrlen(s1); + else + size1 = 0; /* Get pointer to second string */ s2 = *(char**) mem2; - size2 = HDstrlen(s2); + if(s2) + size2 = HDstrlen(s2); + else + size2 = 0; } else if (H5T_STR_NULLTERM == pad) { h5difftrace("diff_datum H5T_STRING null term\n"); /* Get pointer to first string */ s1 = (char*) mem1; - size1 = HDstrlen(s1); + if(s1) + size1 = HDstrlen(s1); + else + size1 = 0; if (size1 > size_mtype) size1 = size_mtype; /* Get pointer to second string */ s2 = (char*) mem2; - size2 = HDstrlen(s2); + if(s2) + size2 = HDstrlen(s2); + else + size2 = 0; if (size2 > size_mtype) size2 = size_mtype; } |