diff options
-rw-r--r-- | MANIFEST | 1 | ||||
-rw-r--r-- | config/intel-osf1 | 180 | ||||
-rw-r--r-- | perform/pio_engine.c | 5 | ||||
-rw-r--r-- | release_docs/RELEASE.txt | 2 | ||||
-rw-r--r-- | test/h5test.c | 5 | ||||
-rw-r--r-- | tools/h5copy/testh5copy.sh | 15 | ||||
-rwxr-xr-x | tools/h5diff/testh5diff.sh | 8 | ||||
-rw-r--r-- | tools/h5dump/testh5dump.sh.in | 17 | ||||
-rw-r--r-- | tools/h5ls/h5ls.c | 3 | ||||
-rwxr-xr-x | tools/h5repack/h5repack.sh.in | 57 |
10 files changed, 27 insertions, 266 deletions
@@ -93,7 +93,6 @@ ./config/ia64-linux-gnu ./config/intel-fflags ./config/intel-flags -./config/intel-osf1 ./config/irix5.x ./config/irix6.x ./config/linux-gnu diff --git a/config/intel-osf1 b/config/intel-osf1 deleted file mode 100644 index 27d89cf..0000000 --- a/config/intel-osf1 +++ /dev/null @@ -1,180 +0,0 @@ -# -*- shell-script -*- -# -# Copyright by The HDF Group. -# Copyright by the Board of Trustees of the University of Illinois. -# All rights reserved. -# -# This file is part of HDF5. The full HDF5 copyright notice, including -# terms governing use, modification, and redistribution, is contained in -# the files COPYING and Copyright.html. COPYING can be found at the root -# of the source code distribution tree; Copyright.html can be found at the -# root level of an installed copy of the electronic HDF5 document set and -# is linked from the top-level documents page. It can also be found at -# http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have -# access to either file, you may request a copy from help@hdfgroup.org. - - -# This file is part of the HDF5 build script. It is processed shortly -# after configure starts and defines, among other things, flags for -# the various compile modes. -# -# See BlankForm in this directory for details. - -# This is for the ASCI RED TFLOPS machine - -# The default compiler is `cicc' -if test "X-" = "X-$CC"; then - CC=cicc - CC_BASENAME=cicc -fi - -# The default archiver is `xar' -AR=${AR:-xar} - -# There is no ranlib -RANLIB=: - -# Additional libraries -LIBS="$LIBS -lnoop_stubs" - -# How to run serial and parallel test programs -# Default parallel tests can fit within 1 processor in -proc 3 mode. -# You may want to use -proc 3 to use fewer physical nodes. -RUNSERIAL=${RUNSERIAL:-"yod -sz 1"} -RUNPARALLEL=${RUNPARALLEL:-"yod -sz 8"} - -# CFLAGS must be set else configure set it to -g -CFLAGS="$CFLAGS" - -# What must *always* be present for things to compile correctly? -# -DH5_TFLOPS: for the Sandia Tflops machine. Had used the builtin -# __PUMAGON__ but H5_TFLOPS is more meaningful. -CPPFLAGS="$CPPFLAGS -DH5_TFLOPS" - -# What compiler flags should be used for code development? -DEBUG_CFLAGS=-g -DEBUG_CPPFLAGS= - -# What compiler flags should be used for building a production -# library? -PROD_CFLAGS=-O -PROD_CPPFLAGS= - -# What compiler flags enable code profiling? -PROFILE_CFLAGS=-pg -PROFILE_CPPFLAGS= - -# Turn off shared lib option. It does not work for TFLOPS yet. -enable_shared="${enable_shared:-no}" - -# Disable stream-vfd option. It does not work for TFLOPS. -enable_stream_vfd="${enable_stream_vfd:-no}" - -# Set this to the width required by printf() to print type `long -# long'. For instance, if the format would be `%lld' then set it to -# `ll' or if the format would be `%qd' set it to `q'. -hdf5_cv_printf_ll=${hdf5_cv_printf_ll='ll'} - -# Cache the sizeof of the following types to save configure time. -# These are verified in test/tconfig in case they change. -ac_cv_type_char=${ac_cv_type_char=yes} -ac_cv_sizeof_char=${ac_cv_sizeof_char='1'} -ac_cv_type_short=${ac_cv_type_short=yes} -ac_cv_sizeof_short=${ac_cv_sizeof_short='2'} -ac_cv_type_int=${ac_cv_type_int=yes} -ac_cv_sizeof_int=${ac_cv_sizeof_int='4'} -ac_cv_type_long=${ac_cv_type_long=yes} -ac_cv_sizeof_long=${ac_cv_sizeof_long='4'} -ac_cv_type_float=${ac_cv_type_float=yes} -ac_cv_sizeof_float=${ac_cv_sizeof_float='4'} -ac_cv_type_double=${ac_cv_type_double=yes} -ac_cv_sizeof_double=${ac_cv_sizeof_double='8'} -ac_cv_type_long_double=${ac_cv_type_long_double=yes} -ac_cv_sizeof_long_double=${ac_cv_sizeof_long_double='8'} -ac_cv_type_long_long=${ac_cv_type_long_long=yes} -ac_cv_sizeof_long_long=${ac_cv_sizeof_long_long='8'} -ac_cv_type_size_t=${ac_cv_type_size_t=yes} -ac_cv_sizeof_size_t=${ac_cv_sizeof_size_t='4'} -ac_cv_type_ssize_t=${ac_cv_type_ssize_t=yes} -ac_cv_sizeof_ssize_t=${ac_cv_sizeof_ssize_t='4'} -ac_cv_type_off_t=${ac_cv_type_off_t=yes} -ac_cv_sizeof_off_t=${ac_cv_sizeof_off_t='4'} - -# Hard set sizeof of the following types to 0 because they are not supported. -ac_cv_type___int64=${ac_cv_type___int64=no} -ac_cv_sizeof___int64=${ac_cv_sizeof___int64='0'} - -# Hard set malloc of zero bytes to no because it does not work. -hdf5_cv_malloc_works=${hdf5_cv_malloc_works='no'} - -# Hard set sizeof_intN_t to 0 because they are not supported. -ac_cv_type_int8_t=${ac_cv_type_int8_t=no} -ac_cv_type_int16_t=${ac_cv_type_int16_t=no} -ac_cv_type_int32_t=${ac_cv_type_int32_t=no} -ac_cv_type_int64_t=${ac_cv_type_int64_t=no} -ac_cv_type_uint8_t=${ac_cv_type_uint8_t=no} -ac_cv_type_uint16_t=${ac_cv_type_uint16_t=no} -ac_cv_type_uint32_t=${ac_cv_type_uint32_t=no} -ac_cv_type_uint64_t=${ac_cv_type_uint64_t=no} -ac_cv_sizeof_int8_t=${ac_cv_sizeof_int8_t='0'} -ac_cv_sizeof_int16_t=${ac_cv_sizeof_int16_t='0'} -ac_cv_sizeof_int32_t=${ac_cv_sizeof_int32_t='0'} -ac_cv_sizeof_int64_t=${ac_cv_sizeof_int64_t='0'} -ac_cv_sizeof_uint8_t=${ac_cv_sizeof_uint8_t='0'} -ac_cv_sizeof_uint16_t=${ac_cv_sizeof_uint16_t='0'} -ac_cv_sizeof_uint32_t=${ac_cv_sizeof_uint32_t='0'} -ac_cv_sizeof_uint64_t=${ac_cv_sizeof_uint64_t='0'} - -# Hard set sizeof_int_leastN_t to 0 because they are not supported. -ac_cv_type_int_least8_t=${ac_cv_type_int_least8_t=no} -ac_cv_type_int_least16_t=${ac_cv_type_int_least16_t=no} -ac_cv_type_int_least32_t=${ac_cv_type_int_least32_t=no} -ac_cv_type_int_least64_t=${ac_cv_type_int_least64_t=no} -ac_cv_type_uint_least8_t=${ac_cv_type_uint_least8_t=no} -ac_cv_type_uint_least16_t=${ac_cv_type_uint_least16_t=no} -ac_cv_type_uint_least32_t=${ac_cv_type_uint_least32_t=no} -ac_cv_type_uint_least64_t=${ac_cv_type_uint_least64_t=no} -ac_cv_sizeof_int_least8_t=${ac_cv_sizeof_int_least8_t='0'} -ac_cv_sizeof_int_least16_t=${ac_cv_sizeof_int_least16_t='0'} -ac_cv_sizeof_int_least32_t=${ac_cv_sizeof_int_least32_t='0'} -ac_cv_sizeof_int_least64_t=${ac_cv_sizeof_int_least64_t='0'} -ac_cv_sizeof_uint_least8_t=${ac_cv_sizeof_uint_least8_t='0'} -ac_cv_sizeof_uint_least16_t=${ac_cv_sizeof_uint_least16_t='0'} -ac_cv_sizeof_uint_least32_t=${ac_cv_sizeof_uint_least32_t='0'} -ac_cv_sizeof_uint_least64_t=${ac_cv_sizeof_uint_least64_t='0'} - -# Hard set sizeof_int_fastN_t to 0 because they are not supported. -ac_cv_type_int_fast8_t=${ac_cv_type_int_fast8_t=no} -ac_cv_type_int_fast16_t=${ac_cv_type_int_fast16_t=no} -ac_cv_type_int_fast32_t=${ac_cv_type_int_fast32_t=no} -ac_cv_type_int_fast64_t=${ac_cv_type_int_fast64_t=no} -ac_cv_type_uint_fast8_t=${ac_cv_type_uint_fast8_t=no} -ac_cv_type_uint_fast16_t=${ac_cv_type_uint_fast16_t=no} -ac_cv_type_uint_fast32_t=${ac_cv_type_uint_fast32_t=no} -ac_cv_type_uint_fast64_t=${ac_cv_type_uint_fast64_t=no} -ac_cv_sizeof_int_fast8_t=${ac_cv_sizeof_int_fast8_t='0'} -ac_cv_sizeof_int_fast16_t=${ac_cv_sizeof_int_fast16_t='0'} -ac_cv_sizeof_int_fast32_t=${ac_cv_sizeof_int_fast32_t='0'} -ac_cv_sizeof_int_fast64_t=${ac_cv_sizeof_int_fast64_t='0'} -ac_cv_sizeof_uint_fast8_t=${ac_cv_sizeof_uint_fast8_t='0'} -ac_cv_sizeof_uint_fast16_t=${ac_cv_sizeof_uint_fast16_t='0'} -ac_cv_sizeof_uint_fast32_t=${ac_cv_sizeof_uint_fast32_t='0'} -ac_cv_sizeof_uint_fast64_t=${ac_cv_sizeof_uint_fast64_t='0'} - -hdf5_cv_system_scope_threads=${hdf5_cv_system_scope_threads="no"} - -# Hard set MPI_File_set_size() working for files over 2GB to no -hdf5_cv_mpi_file_set_size_big=${hdf5_cv_mpi_file_set_size_big='no'} - -# Hard set variables for v1.7 and higher. -# Set gettimeofday_tz to yes. -hdf5_cv_gettimeofday_tz=${hdf5_cv_gettimeofday_tz='yes'} -hdf5_cv_convert_denormal_float=${hdf5_cv_convert_denormal_float='no'} -hdf5_cv_fp_to_ullong_bottom_bit_works=${hdf5_cv_fp_to_ullong_bottom_bit_works='no'} -hdf5_cv_fp_to_ullong_right_maximum=${hdf5_cv_fp_to_ullong_right_maximum='yes'} -hdf5_cv_ldouble_to_uint_works=${hdf5_cv_ldouble_to_uint_works='yes'} -hdf5_cv_sw_ldouble_to_integer_works=${hdf5_cv_sw_ldouble_to_integer_works='yes'} -hdf5_cv_sw_ulong_to_fp_bottom_bit_works=${hdf5_cv_sw_ulong_to_fp_bottom_bit_works='no'} -hdf5_cv_ullong_to_fp_cast_works=${hdf5_cv_ullong_to_fp_cast_works='yes'} -hdf5_cv_ullong_to_ldouble_precision_works=${hdf5_cv_ullong_to_ldouble_precision_works='yes'} -hdf5_cv_fp_to_integer_overflow_works=${hdf5_cv_fp_to_integer_overflow_works='yes'} diff --git a/perform/pio_engine.c b/perform/pio_engine.c index c5214d3..a70ddc3 100644 --- a/perform/pio_engine.c +++ b/perform/pio_engine.c @@ -107,12 +107,7 @@ static int clean_file_g = -1; /*whether to cleanup temporary test */ * is about the best guess. */ #ifndef HDF5_PARAPREFIX -# ifdef __PUMAGON__ -/* For the PFS of TFLOPS */ -# define HDF5_PARAPREFIX "pfs:/pfs_grande/multi/tmp_1" -# else # define HDF5_PARAPREFIX "" -# endif /* __PUMAGON__ */ #endif /* !HDF5_PARAPREFIX */ #ifndef MIN diff --git a/release_docs/RELEASE.txt b/release_docs/RELEASE.txt index 0ac7034..c4e8080 100644 --- a/release_docs/RELEASE.txt +++ b/release_docs/RELEASE.txt @@ -104,6 +104,8 @@ Bug Fixes since HDF5-1.8.3 Configuration ------------- + - Support for TFLOPS, config/intel-osf1, is removed since the TFLOPS + machine has long retired. AKC - 2009/10/06. - Added $(EXEEXT) extension to H5detect when it's executed in the src/Makefile to generate H5Tinit.c so it works correctly on platforms that require the full extension when running executables. diff --git a/test/h5test.c b/test/h5test.c index 360f1d9..03e857f 100644 --- a/test/h5test.c +++ b/test/h5test.c @@ -64,13 +64,8 @@ * is about the best guess. */ #ifndef HDF5_PARAPREFIX -#ifdef __PUMAGON__ -/* For the PFS of TFLOPS */ -#define HDF5_PARAPREFIX "pfs:/pfs_grande/multi/tmp_1" -#else #define HDF5_PARAPREFIX "" #endif -#endif char *paraprefix = NULL; /* for command line option para-prefix */ #ifdef H5_HAVE_PARALLEL MPI_Info h5_io_info_g=MPI_INFO_NULL;/* MPI INFO object for IO */ diff --git a/tools/h5copy/testh5copy.sh b/tools/h5copy/testh5copy.sh index ddb37ee..c374e08 100644 --- a/tools/h5copy/testh5copy.sh +++ b/tools/h5copy/testh5copy.sh @@ -113,7 +113,7 @@ TOOLTEST() rm -f output.out fi fi - + if [ $runh5diff != no ]; then H5DIFFTEST $inputfile $outputfile $7 $9 fi @@ -167,13 +167,8 @@ TOOLTEST_FAIL() H5DIFFTEST() { VERIFY $@ - if [ "`uname -s`" = "TFLOPS O/S" ]; then - $RUNSERIAL $H5DIFF_BIN -q $@ - else - $RUNSERIAL $H5DIFF_BIN -q "$@" - fi + $RUNSERIAL $H5DIFF_BIN -q "$@" RET=$? - if [ $RET != 0 ] ; then echo "*FAILED*" nerrors="`expr $nerrors + 1`" @@ -187,11 +182,7 @@ H5DIFFTEST() H5DIFFTEST_FAIL() { VERIFY $@ - if [ "`uname -s`" = "TFLOPS O/S" ]; then - $RUNSERIAL $H5DIFF_BIN -q $@ - else - $RUNSERIAL $H5DIFF_BIN -q "$@" - fi + $RUNSERIAL $H5DIFF_BIN -q "$@" RET=$? if [ $RET != 1 ] ; then diff --git a/tools/h5diff/testh5diff.sh b/tools/h5diff/testh5diff.sh index 005a736..dec91d3 100755 --- a/tools/h5diff/testh5diff.sh +++ b/tools/h5diff/testh5diff.sh @@ -201,19 +201,13 @@ TOOLTEST() { fi # Run test. - # Tflops interprets "$@" as "" when no parameter is given (e.g., the - # case of missing file name). Changed it to use $@ till Tflops fixes it. #TESTING $H5DIFF $@ ( #echo "#############################" #echo "Expected output for '$H5DIFF $@'" #echo "#############################" #cd $srcdir/testfiles - if [ "`uname -s`" = "TFLOPS O/S" ]; then - eval $RUNCMD $H5DIFF_BIN $@ - else - eval $RUNCMD $H5DIFF_BIN "$@" - fi + eval $RUNCMD $H5DIFF_BIN "$@" ) >$actual 2>$actual_err # save actual and actual_err in case they are needed later. cp $actual $actual_sav diff --git a/tools/h5dump/testh5dump.sh.in b/tools/h5dump/testh5dump.sh.in index 3ffff50..9e6cb01 100644 --- a/tools/h5dump/testh5dump.sh.in +++ b/tools/h5dump/testh5dump.sh.in @@ -161,12 +161,8 @@ DIFFTEST() { PRINT_H5DIFF $@ ( - cd $srcdir/../testfiles - if [ "`uname -s`" = "TFLOPS O/S" ]; then - $RUNSERIAL $H5DIFF_BIN $@ -q - else - $RUNSERIAL $H5DIFF_BIN "$@" -q - fi + cd $srcdir/../testfiles + $RUNSERIAL $H5DIFF_BIN "$@" -q ) RET=$? if [ $RET != 0 ] ; then @@ -198,12 +194,8 @@ IMPORTTEST() PRINT_H5IMPORT $@ ( - cd $srcdir/../testfiles - if [ "`uname -s`" = "TFLOPS O/S" ]; then - $RUNSERIAL $H5IMPORT_BIN $@ - else - $RUNSERIAL $H5IMPORT_BIN "$@" - fi + cd $srcdir/../testfiles + $RUNSERIAL $H5IMPORT_BIN "$@" ) RET=$? if [ $RET != 0 ] ; then @@ -340,6 +332,7 @@ TOOLTEST tnofilename.ddl # tests for super block TOOLTEST tboot1.ddl -H -B -d dset tfcontents1.h5 TOOLTEST tboot2.ddl -B tfcontents2.h5 +TOOLTEST file_space.ddl -B file_space.h5 # test -p with a non existing dataset TOOLTEST tperror.ddl -p -d bogus tfcontents1.h5 diff --git a/tools/h5ls/h5ls.c b/tools/h5ls/h5ls.c index ca0ddcb..a2dc128 100644 --- a/tools/h5ls/h5ls.c +++ b/tools/h5ls/h5ls.c @@ -2109,15 +2109,12 @@ get_width(void) width = w[0]; } #elif defined(H5_HAVE_TIOCGWINSZ) && defined(H5_HAVE_IOCTL) -#ifndef __PUMAGON__ -/* the ioctl() call coredump on TFLOPS. Turn it off for now. */ { /* Unix with ioctl(TIOCGWINSZ) */ struct winsize w; if (ioctl(2, TIOCGWINSZ, &w)>=0 && w.ws_col>0) width = w.ws_col; } -#endif #elif defined(H5_HAVE_TIOCGETD) && defined(H5_HAVE_IOCTL) { /* Unix with ioctl(TIOCGETD) */ diff --git a/tools/h5repack/h5repack.sh.in b/tools/h5repack/h5repack.sh.in index 01c33ef..e9aae81 100755 --- a/tools/h5repack/h5repack.sh.in +++ b/tools/h5repack/h5repack.sh.in @@ -96,11 +96,7 @@ SKIP() { DIFFTEST() { VERIFY $@ - if [ "`uname -s`" = "TFLOPS O/S" ]; then - $RUNSERIAL $H5DIFF_BIN -q $@ - else - $RUNSERIAL $H5DIFF_BIN -q "$@" - fi + $RUNSERIAL $H5DIFF_BIN -q "$@" RET=$? if [ $RET != 0 ] ; then echo "*FAILED*" @@ -116,27 +112,20 @@ DIFFTEST() TOOLTEST() { # Run test. - # Tflops interprets "$@" as "" when no parameter is given (e.g., the - # case of missing file name). Changed it to use $@ till Tflops fixes it. TESTING $H5REPACK $@ infile=$srcdir/testfiles/$1 path=`pwd` outfile=$path/out.$1 shift - if [ "`uname -s`" = "TFLOPS O/S" ]; then - $RUNSERIAL $H5REPACK_BIN $@ $infile $outfile - else - $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile - fi - + $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile RET=$? if [ $RET != 0 ] ; then - echo "*FAILED*" - nerrors="`expr $nerrors + 1`" + echo "*FAILED*" + nerrors="`expr $nerrors + 1`" else - echo " PASSED" - DIFFTEST $infile $outfile + echo " PASSED" + DIFFTEST $infile $outfile fi rm -f $outfile } @@ -146,27 +135,20 @@ TOOLTEST() TOOLTEST0() { # Run test. - # Tflops interprets "$@" as "" when no parameter is given (e.g., the - # case of missing file name). Changed it to use $@ till Tflops fixes it. TESTING $H5REPACK $@ infile=$srcdir/testfiles/$1 path=`pwd` outfile=$path/out.$1 shift - if [ "`uname -s`" = "TFLOPS O/S" ]; then - $RUNSERIAL $H5REPACK_BIN -i $infile -o $outfile $@ - else - $RUNSERIAL $H5REPACK_BIN -i $infile -o $outfile "$@" - fi - + $RUNSERIAL $H5REPACK_BIN -i $infile -o $outfile "$@" RET=$? if [ $RET != 0 ] ; then - echo "*FAILED*" - nerrors="`expr $nerrors + 1`" + echo "*FAILED*" + nerrors="`expr $nerrors + 1`" else - echo " PASSED" - DIFFTEST $infile $outfile + echo " PASSED" + DIFFTEST $infile $outfile fi rm -f $outfile } @@ -178,27 +160,20 @@ TOOLTEST0() TOOLTEST1() { # Run test. - # Tflops interprets "$@" as "" when no parameter is given (e.g., the - # case of missing file name). Changed it to use $@ till Tflops fixes it. TESTING $H5REPACK $@ infile=$srcdir/../testfiles/$1 path=`pwd` outfile=$path/out.$1 shift - if [ "`uname -s`" = "TFLOPS O/S" ]; then - $RUNSERIAL $H5REPACK_BIN $@ $infile $outfile - else - $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile - fi - + $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile RET=$? if [ $RET != 0 ] ; then - echo "*FAILED*" - nerrors="`expr $nerrors + 1`" + echo "*FAILED*" + nerrors="`expr $nerrors + 1`" else - echo " PASSED" - DIFFTEST $infile $outfile + echo " PASSED" + DIFFTEST $infile $outfile fi rm -f $outfile } |