diff options
| -rw-r--r-- | test/Makefile.am | 4 | ||||
| -rw-r--r-- | test/Makefile.in | 4 | ||||
| -rw-r--r-- | test/tcoords.c | 745 |
3 files changed, 423 insertions, 330 deletions
diff --git a/test/Makefile.am b/test/Makefile.am index 62b1f92..4f4951c 100644 --- a/test/Makefile.am +++ b/test/Makefile.am @@ -106,8 +106,8 @@ CHECK_CLEANFILES+=cmpd_dset.h5 compact_dataset.h5 dataset.h5 extend.h5 istore.h5 tfile[1-4].h5 th5s[1-3].h5 lheap.h5 fheap.h5 ohdr.h5 stab.h5 \ extern_[1-3].h5 extern_[1-4][ab].raw gheap[0-4].h5 dt_arith[1-2]\ links.h5 links[0-6]*.h5 big.data big[0-9][0-9][0-9][0-9][0-9].h5 \ - stdio.h5 sec2.h5 dtypes[1-8].h5 dt_arith[1-2].h5 tattr.h5 h5 \ - tselect.h5 mtime.h5 unlink.h5 unicode.h5 \ + stdio.h5 sec2.h5 dtypes[1-8].h5 dt_arith[1-2].h5 tattr.h5 \ + tselect.h5 mtime.h5 unlink.h5 unicode.h5 coord.h5 \ fillval_[0-9].h5 fillval.raw mount_[0-9].h5 testmeta.h5 ttime.h5 \ trefer[1-3].h5 tvltypes.h5 tvlstr.h5 tvlstr2.h5 flush.h5 \ enum1.h5 titerate.h5 ttsafe.h5 tarray1.h5 tgenprop.h5 \ diff --git a/test/Makefile.in b/test/Makefile.in index a7617b3..84f0737 100644 --- a/test/Makefile.in +++ b/test/Makefile.in @@ -590,8 +590,8 @@ CHECK_CLEANFILES = *.chkexe *.chklog *.clog cmpd_dset.h5 \ extern_[1-3].h5 extern_[1-4][ab].raw gheap[0-4].h5 \ dt_arith[1-2] links.h5 links[0-6]*.h5 big.data \ big[0-9][0-9][0-9][0-9][0-9].h5 stdio.h5 sec2.h5 \ - dtypes[1-8].h5 dt_arith[1-2].h5 tattr.h5 h5 tselect.h5 \ - mtime.h5 unlink.h5 unicode.h5 fillval_[0-9].h5 fillval.raw \ + dtypes[1-8].h5 dt_arith[1-2].h5 tattr.h5 tselect.h5 mtime.h5 \ + unlink.h5 unicode.h5 coord.h5 fillval_[0-9].h5 fillval.raw \ mount_[0-9].h5 testmeta.h5 ttime.h5 trefer[1-3].h5 tvltypes.h5 \ tvlstr.h5 tvlstr2.h5 flush.h5 enum1.h5 titerate.h5 ttsafe.h5 \ tarray1.h5 tgenprop.h5 tmisc[0-9]*.h5 set_extent_read.h5 \ diff --git a/test/tcoords.c b/test/tcoords.c index 67e7aa1..0b04f6d 100644 --- a/test/tcoords.c +++ b/test/tcoords.c @@ -15,369 +15,462 @@ /*********************************************************** * -* Test program: th5s +* Test program: tcoords * -* Test the element coordinates for dataspace selection. +* Test the element coordinates for dataspace selection. For +* chunked dataset, when the hyperslab selection of some +* dimensions is full, the library optimize it by "flattenning" +* the fully selected dimensions. This program tests if the +* coordinates of selected elements are correctly calculated. * *************************************************************/ #include "testhdf5.h" -/* -** Data used to write the dataset. -*/ - -static int da_buffer[12][1][6][2]; - -static hsize_t da_dims[4] = { 12, 1, 6, 2 }; -static hsize_t da_maxdims[4] = { H5S_UNLIMITED, H5S_UNLIMITED, H5S_UNLIMITED, H5S_UNLIMITED }; -/*static hsize_t da_chunksize[4] = { 3, 1, 2, 1 };*/ -static hsize_t da_chunksize[4] = { 12, 1, 6, 2 }; - -/* -** The dataset end of the selection is done using element selection. -** These are the element locations. -*/ -#ifdef TMP -static hsize_t da_elements[12][4] = { { 11, 0, 0, 0 }, - { 11, 0, 0, 1 }, - { 11, 0, 5, 0 }, - { 11, 0, 5, 1 }, - { 11, 0, 1, 0 }, - { 11, 0, 1, 1 }, - { 11, 0, 2, 0 }, - { 11, 0, 2, 1 }, - { 11, 0, 3, 0 }, - { 11, 0, 3, 1 }, - { 11, 0, 4, 0 }, - { 11, 0, 4, 1 } }; -#else -static hsize_t da_elements[12][4] = { { 11, 0, 0, 0 }, - { 11, 0, 0, 1 }, - { 11, 0, 1, 0 }, - { 11, 0, 1, 1 }, - { 11, 0, 2, 0 }, - { 11, 0, 2, 1 }, - { 11, 0, 3, 0 }, - { 11, 0, 3, 1 }, - { 11, 0, 4, 0 }, - { 11, 0, 4, 1 }, - { 11, 0, 5, 0 }, - { 11, 0, 5, 1 } }; -#endif - -/* -** This is where it gets interesting. +/*********************************************************** ** -** First experiment: the data being read is rank=2, so use two -** dimensions. However, the array is 6x3, while the transfer is 6x2. -** We use a hyperslab to select the subset. This case shows no -** problem. -*/ -static int mem1_buffer[6][3]; - -static hsize_t mem1_dims[2] = { 6, 3}; - -static hsize_t mem1_start[2] = { 0, 0 }; -static hsize_t mem1_count[2] = { 1, 1 }; -static hsize_t mem1_stride[2] = { 1, 1 }; -static hsize_t mem1_block[2] = { 6, 2 }; - - -/* -** Second experiment: the transfer is the same rank as above, but we -** add two dimensions of 1. I.e., the array is 1x1x6x2. In this -** case, the 6x2 selection is over the entire array, not a subset of -** the array. However, we still use hyperslab selection. This case -** shows no problem. -*/ -static int mem2_buffer[1][1][6][2]; - -static hsize_t mem2_dims[4] = { 1, 1, 6, 2 }; - -static hsize_t mem2_start[4] = { 0, 0, 0, 0 }; -static hsize_t mem2_count[4] = { 1, 1, 1, 1 }; -static hsize_t mem2_stride[4] = { 1, 1, 1, 1 }; -static hsize_t mem2_block[4] = { 1, 1, 6, 2 }; - - -/* -** Third experiment: the transfer is the same rank as above, and we -** add two dimensions of 1, but now the array is larger: 1x1x6x3. -** The selection is now over a subset of the array (1x1x6x2). This -** case demonstrates the problem. -*/ -/*static int mem3_buffer[1][1][6][3];*/ -static int mem3_buffer[1][1][6][3]; - -/*static hsize_t mem3_dims[4] = { 1, 1, 6, 3 };*/ -static hsize_t mem3_dims[4] = { 1, 1, 6, 3 }; - -static hsize_t mem3_start[4] = { 0, 0, 0, 0 }; -static hsize_t mem3_count[4] = { 1, 1, 1, 1 }; -static hsize_t mem3_stride[4] = { 1, 1, 1, 1 }; -static hsize_t mem3_block[4] = { 1, 1, 6, 2 }; - -/* -** Fourth experiment: the transfer is the same rank as above, but we -** add two dimensions of 1. I.e., the array is 1x6x3. In this -** case, the 6x2 selection is over the entire array, not a subset of -** the array. However, we still use hyperslab selection. This case -** shows the problem. -*/ -static int mem4_buffer[1][6][3]; - -static hsize_t mem4_dims[3] = { 1, 6, 3 }; - -static hsize_t mem4_start[3] = { 0, 0, 0 }; -static hsize_t mem4_count[3] = { 1, 1, 1 }; -static hsize_t mem4_stride[3] = { 1, 1, 1 }; -static hsize_t mem4_block[3] = { 1, 6, 2 }; - - -/* -** Subroutine to write the dataset. It's probably not important to -** this example, other than to know it's shape. -*/ -void write_dataset() +** test_single_end(): Test full hyperslab selection of only +** one block. +** +*************************************************************/ +static void test_single_end(hid_t file) { - int i; - hid_t fid, dsid, daid, msid, plid; - herr_t rv; - - fid = H5Fcreate("coord.hdf", H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); - if(fid < 0) - { - H5Eprint2(H5E_DEFAULT, stderr); - exit(1); + hid_t sid, plid, did, msid; + herr_t ret; /* Generic error return */ + int i, j, k; + hsize_t da_dims[4] = { 2, 3, 6, 2 }; + hsize_t da_chunksize[4] = { 1, 3, 3, 2 }; + int da_buffer[2][3][6][2]; + + /* For testing the full selection in the fastest-growing end */ + int mem1_buffer[1][1][6][2]; + hsize_t mem1_dims[4] = { 1, 1, 6, 2 }; + hsize_t mem1_start[4] = { 0, 0, 0, 0 }; + hsize_t mem1_count[4] = { 1, 1, 1, 1 }; + hsize_t mem1_stride[4] = { 1, 1, 1, 1 }; + hsize_t mem1_block[4] = { 1, 1, 6, 2 }; + + /* For testing the full selection in the slowest-growing end */ + int mem2_buffer[2][3][1][1]; + hsize_t mem2_dims[4] = { 2, 3, 1, 1 }; + hsize_t mem2_start[4] = { 0, 0, 0, 0 }; + hsize_t mem2_count[4] = { 1, 1, 1, 1 }; + hsize_t mem2_stride[4] = { 1, 1, 1, 1 }; + hsize_t mem2_block[4] = { 2, 3, 1, 1 }; + + /* For testing the full selection in the middle dimensions */ + int mem3_buffer[1][3][6][1]; + hsize_t mem3_dims[4] = { 1, 3, 6, 1 }; + hsize_t mem3_start[4] = { 0, 0, 0, 0 }; + hsize_t mem3_count[4] = { 1, 1, 1, 1 }; + hsize_t mem3_stride[4] = { 1, 1, 1, 1 }; + hsize_t mem3_block[4] = { 1, 3, 6, 1 }; + + /* Create and write the dataset */ + sid = H5Screate_simple(4, da_dims, da_dims); + CHECK(sid, FAIL, "H5Screate_simple"); + + plid = H5Pcreate(H5P_DATASET_CREATE); + CHECK(plid, FAIL, "H5Pcreate"); + + ret = H5Pset_chunk(plid, 4, da_chunksize); + CHECK(ret, FAIL, "H5Pset_chunk"); + + did = H5Dcreate2(file, "single_end", H5T_NATIVE_INT, sid, H5P_DEFAULT, plid, H5P_DEFAULT); + CHECK(did, FAIL, "H5Dcreate2"); + + for(i=0; i<2; i++) { + for(j=0; j<3; j++) { + for(k=0; k<6; k++) { + da_buffer[i][j][k][0] = i*100 + j*10 + k; + da_buffer[i][j][k][0] = i*100 + j*10 + k + 1; + } + } } - /*dsid = H5Screate_simple(4, da_dims, da_maxdims);*/ - dsid = H5Screate_simple(4, da_dims, da_dims); - if(dsid < 0) - { - H5Eprint2(H5E_DEFAULT, stderr); - exit(1); - } + ret = H5Dwrite(did, H5T_NATIVE_INT, sid, sid, H5P_DEFAULT, da_buffer); + CHECK(ret, FAIL, "H5Dwrite"); - plid = H5Pcreate(H5P_DATASET_CREATE); - if(plid < 0) - { - H5Eprint2(H5E_DEFAULT, stderr); - exit(1); - } + ret = H5Dclose(did); + CHECK(ret, FAIL, "H5Dclose"); - rv = H5Pset_layout(plid, H5D_CHUNKED); - if(rv < 0) - { - H5Eprint2(H5E_DEFAULT, stderr); - exit(1); - } + + /* ****** Case 1: ****** + * Testing the full selection in the fastest-growing end */ + did = H5Dopen2(file, "single_end", H5P_DEFAULT); + CHECK(did, FAIL, "H5Dopen"); - rv = H5Pset_chunk(plid, 4, da_chunksize); - if(rv < 0) - { - H5Eprint2(H5E_DEFAULT, stderr); - exit(1); - } + /* Select the elements in the dataset */ + ret = H5Sselect_hyperslab(sid, H5S_SELECT_SET, mem1_start, mem1_stride, mem1_count, mem1_block); + CHECK(ret, FAIL, "H5Sselect_hyperslab"); - daid = H5Dcreate2(fid, "dataset", H5T_NATIVE_INT, dsid, H5P_DEFAULT, plid, H5P_DEFAULT); - if(daid < 0) - { - H5Eprint2(H5E_DEFAULT, stderr); - exit(1); - } + msid = H5Screate_simple(4, mem1_dims, mem1_dims); + CHECK(msid, FAIL, "H5Screate_simple"); - /* - ** We'll only be interested in the front plane ([0][0][0-5[0-1]) so - ** we only initialize that. - */ - for(i = 0; i < 12; i++) - { - int j; - for(j = 0; j < 6; j++) - { - da_buffer[i][0][j][0] = j * 10; - da_buffer[i][0][j][1] = j * 10 + 1; - } - } + ret = H5Sselect_all(msid); + CHECK(ret, FAIL, "H5Sselect_all"); - msid = H5Screate_simple(4, da_dims, da_dims); - if(msid < 0) - { - H5Eprint2(H5E_DEFAULT, stderr); - exit(1); - } + ret = H5Dread(did, H5T_NATIVE_INT, msid, sid, H5P_DEFAULT, mem1_buffer); + CHECK(ret, FAIL, "H5Dread"); - rv = H5Dwrite(daid, H5T_NATIVE_INT, msid, dsid, H5P_DEFAULT, da_buffer); - if(rv < 0) - { - H5Eprint2(H5E_DEFAULT, stderr); - exit(1); - } + ret = H5Dclose(did); + CHECK(ret, FAIL, "H5Dclose"); - rv = H5Dclose(daid); - if(rv < 0) - { - H5Eprint2(H5E_DEFAULT, stderr); - exit(1); - } + ret = H5Sclose(msid); + CHECK(ret, FAIL, "H5Sclose"); - rv = H5Fclose(fid); - if(rv < 0) - { - H5Eprint2(H5E_DEFAULT, stderr); - exit(1); - } + for(i=0; i<6; i++) + for(j=0; j<2; j++) + if(da_buffer[0][0][i][j] != mem1_buffer[0][0][i][j]) { + TestErrPrintf("Read different values than written at index 0,0,%d,%d\n", i, j); + } + + /* ****** Case 2: ****** + * Testing the full selection in the slowest-growing end */ + did = H5Dopen2(file, "single_end", H5P_DEFAULT); + CHECK(did, FAIL, "H5Dopen"); + + /* Select the elements in the dataset */ + ret = H5Sselect_hyperslab(sid, H5S_SELECT_SET, mem2_start, mem2_stride, mem2_count, mem2_block); + CHECK(ret, FAIL, "H5Sselect_hyperslab"); + + msid = H5Screate_simple(4, mem2_dims, mem2_dims); + CHECK(msid, FAIL, "H5Screate_simple"); + + ret = H5Sselect_all(msid); + CHECK(ret, FAIL, "H5Sselect_all"); + + ret = H5Dread(did, H5T_NATIVE_INT, msid, sid, H5P_DEFAULT, mem2_buffer); + CHECK(ret, FAIL, "H5Dread"); + + ret = H5Dclose(did); + CHECK(ret, FAIL, "H5Dclose"); + + ret = H5Sclose(msid); + CHECK(ret, FAIL, "H5Sclose"); + + for(i=0; i<2; i++) + for(j=0; j<3; j++) + if(da_buffer[i][j][0][0] != mem2_buffer[i][j][0][0]) { + TestErrPrintf("Read different values than written at index %d,%d,0,0\n", i, j); + } + + /* ****** Case 3: ****** + * Testing the full selection in the middle dimensions */ + did = H5Dopen2(file, "single_end", H5P_DEFAULT); + CHECK(did, FAIL, "H5Dopen"); + + /* Select the elements in the dataset */ + ret = H5Sselect_hyperslab(sid, H5S_SELECT_SET, mem3_start, mem3_stride, mem3_count, mem3_block); + CHECK(ret, FAIL, "H5Sselect_hyperslab"); + + msid = H5Screate_simple(4, mem3_dims, mem3_dims); + CHECK(msid, FAIL, "H5Screate_simple"); + + ret = H5Sselect_all(msid); + CHECK(ret, FAIL, "H5Sselect_all"); + + ret = H5Dread(did, H5T_NATIVE_INT, msid, sid, H5P_DEFAULT, mem3_buffer); + CHECK(ret, FAIL, "H5Dread"); + + ret = H5Dclose(did); + CHECK(ret, FAIL, "H5Dclose"); + + ret = H5Sclose(msid); + CHECK(ret, FAIL, "H5Sclose"); + + for(i=0; i<3; i++) + for(j=0; j<6; j++) + if(da_buffer[0][i][j][0] != mem3_buffer[0][i][j][0]) { + TestErrPrintf("Read different values than written at index 0,%d,%d,0\n", i, j); + } + + + ret = H5Sclose(sid); + CHECK(ret, FAIL, "H5Sclose"); + + ret = H5Pclose(plid); + CHECK(ret, FAIL, "H5Pclose"); } -/* -** Read a dataset using the provided parameters. -*/ -void read_dataset(int rank, - int* buffer, - hsize_t* mdims, - hsize_t* start, - hsize_t* count, - hsize_t* stride, - hsize_t* block) + +/*********************************************************** +** +** test_multiple_end(): Test full hyperslab selection of +** multiple blocks. +** +*************************************************************/ +static void test_multiple_ends(hid_t file) { - hid_t fid, dsid, daid, msid, plid; - herr_t rv; - - fid = H5Fopen("coord.hdf", H5F_ACC_RDONLY, H5P_DEFAULT); - if(fid < 0) - { - H5Eprint2(H5E_DEFAULT, stderr); - exit(1); - } + hid_t sid, plid, did, msid; + herr_t ret; /* Generic error return */ + int i, j, k, l, m, n, p; + hsize_t da_dims[8] = { 4, 5, 3, 4, 2, 3, 6, 2 }; + hsize_t da_chunksize[8] = { 1, 5, 3, 2, 2, 3, 3, 2 }; + int da_buffer[4][5][3][4][2][3][6][2]; + + /* For testing the full selections in the fastest-growing end and in the middle dimensions */ + int mem1_buffer[1][1][1][4][2][1][6][2]; + hsize_t mem1_dims[8] = { 1, 1, 1, 4, 2, 1, 6, 2 }; + hsize_t mem1_start[8] = { 0, 0, 0, 0, 0, 0, 0, 0 }; + hsize_t mem1_count[8] = { 1, 1, 1, 1, 1, 1, 1, 1 }; + hsize_t mem1_stride[8] = { 1, 1, 1, 1, 1, 1, 1, 1 }; + hsize_t mem1_block[8] = { 1, 1, 1, 4, 2, 1, 6, 2 }; + + /* For testing the full selections in the slowest-growing end and in the middle dimensions */ + int mem2_buffer[4][5][1][4][2][1][1][1]; + hsize_t mem2_dims[8] = { 4, 5, 1, 4, 2, 1, 1, 1 }; + hsize_t mem2_start[8] = { 0, 0, 0, 0, 0, 0, 0, 0 }; + hsize_t mem2_count[8] = { 1, 1, 1, 1, 1, 1, 1, 1 }; + hsize_t mem2_stride[8] = { 1, 1, 1, 1, 1, 1, 1, 1 }; + hsize_t mem2_block[8] = { 4, 5, 1, 4, 2, 1, 1, 1 }; + + /* For testing two unadjacent full selections in the middle dimensions */ + int mem3_buffer[1][5][3][1][1][3][6][1]; + hsize_t mem3_dims[8] = { 1, 5, 3, 1, 1, 3, 6, 1 }; + hsize_t mem3_start[8] = { 0, 0, 0, 0, 0, 0, 0, 0 }; + hsize_t mem3_count[8] = { 1, 1, 1, 1, 1, 1, 1, 1 }; + hsize_t mem3_stride[8] = { 1, 1, 1, 1, 1, 1, 1, 1 }; + hsize_t mem3_block[8] = { 1, 5, 3, 1, 1, 3, 6, 1 }; + + /* For testing the full selections in the fastest-growing end and the slowest-growing end */ + int mem4_buffer[4][5][1][1][1][1][6][2]; + hsize_t mem4_dims[8] = { 4, 5, 1, 1, 1, 1, 6, 2 }; + hsize_t mem4_start[8] = { 0, 0, 0, 0, 0, 0, 0, 0 }; + hsize_t mem4_count[8] = { 1, 1, 1, 1, 1, 1, 1, 1 }; + hsize_t mem4_stride[8] = { 1, 1, 1, 1, 1, 1, 1, 1 }; + hsize_t mem4_block[8] = { 4, 5, 1, 1, 1, 1, 6, 2 }; + + /* For testing the full selections in the fastest-growing end and slowest-growing end, + * also in the middle dimensions */ + int mem5_buffer[4][5][1][4][2][1][6][2]; + hsize_t mem5_dims[8] = { 4, 5, 1, 4, 2, 1, 6, 2 }; + hsize_t mem5_start[8] = { 0, 0, 0, 0, 0, 0, 0, 0 }; + hsize_t mem5_count[8] = { 1, 1, 1, 1, 1, 1, 1, 1 }; + hsize_t mem5_stride[8] = { 1, 1, 1, 1, 1, 1, 1, 1 }; + hsize_t mem5_block[8] = { 4, 5, 1, 4, 2, 1, 6, 2 }; + + /* Create and write the dataset */ + sid = H5Screate_simple(8, da_dims, da_dims); + CHECK(sid, FAIL, "H5Screate_simple"); + + plid = H5Pcreate(H5P_DATASET_CREATE); + CHECK(plid, FAIL, "H5Pcreate"); + + ret = H5Pset_chunk(plid, 8, da_chunksize); + CHECK(ret, FAIL, "H5Pset_chunk"); + + did = H5Dcreate2(file, "multiple_ends", H5T_NATIVE_INT, sid, H5P_DEFAULT, plid, H5P_DEFAULT); + CHECK(did, FAIL, "H5Dcreate2"); + + for(i=0; i<4; i++) + for(j=0; j<5; j++) + for(k=0; k<3; k++) + for(l=0; l<4; l++) + for(m=0; m<2; m++) + for(n=0; n<3; n++) + for(p=0; p<6; p++) { + da_buffer[i][j][k][l][m][n][p][0] = i*1000000 + j*100000 + k*10000 + l*1000 + m*100 + n*10 + p; + da_buffer[i][j][k][l][m][n][p][1] = i*1000000 + j*100000 + k*10000 + l*1000 + m*100 + n*10 + p + 1; + } + + ret = H5Dwrite(did, H5T_NATIVE_INT, sid, sid, H5P_DEFAULT, da_buffer); + CHECK(ret, FAIL, "H5Dwrite"); + + ret = H5Dclose(did); + CHECK(ret, FAIL, "H5Dclose"); + + /* ****** Case 1: ****** + * Testing the full selections in the fastest-growing end and in the middle dimensions*/ + did = H5Dopen2(file, "multiple_ends", H5P_DEFAULT); + CHECK(did, FAIL, "H5Dopen"); + + /* Select the elements in the dataset */ + ret = H5Sselect_hyperslab(sid, H5S_SELECT_SET, mem1_start, mem1_stride, mem1_count, mem1_block); + CHECK(ret, FAIL, "H5Sselect_hyperslab"); + + msid = H5Screate_simple(8, mem1_dims, mem1_dims); + CHECK(msid, FAIL, "H5Screate_simple"); + + ret = H5Sselect_all(msid); + CHECK(ret, FAIL, "H5Sselect_all"); + + ret = H5Dread(did, H5T_NATIVE_INT, msid, sid, H5P_DEFAULT, mem1_buffer); + CHECK(ret, FAIL, "H5Dread"); + + ret = H5Dclose(did); + CHECK(ret, FAIL, "H5Dclose"); + + ret = H5Sclose(msid); + CHECK(ret, FAIL, "H5Sclose"); + + for(i=0; i<4; i++) + for(j=0; j<2; j++) + for(k=0; k<6; k++) + for(l=0; l<2; l++) + if(da_buffer[0][0][0][i][j][0][k][l] != mem1_buffer[0][0][0][i][j][0][k][l]) { + TestErrPrintf("Read different values than written at index 0,0,0,%d,%d,0,%d,%d\n", i, j, k, l); + } + + /* ****** Case 2: ****** + * Testing the full selections in the slowest-growing end and in the middle dimensions*/ + did = H5Dopen2(file, "multiple_ends", H5P_DEFAULT); + CHECK(did, FAIL, "H5Dopen"); + + /* Select the elements in the dataset */ + ret = H5Sselect_hyperslab(sid, H5S_SELECT_SET, mem2_start, mem2_stride, mem2_count, mem2_block); + CHECK(ret, FAIL, "H5Sselect_hyperslab"); + + msid = H5Screate_simple(8, mem2_dims, mem2_dims); + CHECK(msid, FAIL, "H5Screate_simple"); + + ret = H5Sselect_all(msid); + CHECK(ret, FAIL, "H5Sselect_all"); + + ret = H5Dread(did, H5T_NATIVE_INT, msid, sid, H5P_DEFAULT, mem2_buffer); + CHECK(ret, FAIL, "H5Dread"); + + ret = H5Dclose(did); + CHECK(ret, FAIL, "H5Dclose"); + + ret = H5Sclose(msid); + CHECK(ret, FAIL, "H5Sclose"); + + for(i=0; i<4; i++) + for(j=0; j<5; j++) + for(k=0; k<4; k++) + for(l=0; l<2; l++) + if(da_buffer[i][j][0][k][l][0][0][0] != mem2_buffer[i][j][0][k][l][0][0][0]) { + TestErrPrintf("Read different values than written at index %d,%d,0,%d,%d,0,0,0\n", i, j, k, l); + } + + /* ****** Case 3: ****** + * Testing two unadjacent full selections in the middle dimensions */ + did = H5Dopen2(file, "multiple_ends", H5P_DEFAULT); + CHECK(did, FAIL, "H5Dopen"); - daid = H5Dopen2(fid, "dataset", H5P_DEFAULT); - if(daid < 0) - { - H5Eprint2(H5E_DEFAULT, stderr); - exit(1); - } + /* Select the elements in the dataset */ + ret = H5Sselect_hyperslab(sid, H5S_SELECT_SET, mem3_start, mem3_stride, mem3_count, mem3_block); + CHECK(ret, FAIL, "H5Sselect_hyperslab"); + msid = H5Screate_simple(8, mem3_dims, mem3_dims); + CHECK(msid, FAIL, "H5Screate_simple"); - dsid = H5Dget_space(daid); - if(dsid < 0) - { - H5Eprint2(H5E_DEFAULT, stderr); - exit(1); - } + ret = H5Sselect_all(msid); + CHECK(ret, FAIL, "H5Sselect_all"); - /* - ** Element selection is used to select 18 elements from the dataset. - */ -#ifdef TMP - rv = H5Sselect_elements(dsid, H5S_SELECT_SET, 12, (const hsize_t**)da_elements); -#else - rv = H5Sselect_hyperslab(dsid, H5S_SELECT_SET, mem2_start, mem2_stride, mem2_count, mem2_block); -#endif - if(rv < 0) - { - H5Eprint2(H5E_DEFAULT, stderr); - exit(1); - } + ret = H5Dread(did, H5T_NATIVE_INT, msid, sid, H5P_DEFAULT, mem3_buffer); + CHECK(ret, FAIL, "H5Dread"); - msid = H5Screate_simple(rank, mdims, mdims); - if(dsid < 0) - { - H5Eprint2(H5E_DEFAULT, stderr); - exit(1); - } + ret = H5Dclose(did); + CHECK(ret, FAIL, "H5Dclose"); - /* - ** The element selection above is combined with hyperslab - ** selection. The selection is always be a contiguous block. (See - ** above.) - */ - rv = H5Sselect_hyperslab(msid, H5S_SELECT_SET, start, stride, count, block); - if(rv < 0) - { - H5Eprint2(H5E_DEFAULT, stderr); - exit(1); - } + ret = H5Sclose(msid); + CHECK(ret, FAIL, "H5Sclose"); - rv = H5Dread(daid, H5T_NATIVE_INT, msid, dsid, H5P_DEFAULT, buffer); - if(rv < 0) - { - H5Eprint2(H5E_DEFAULT, stderr); - exit(1); - } + for(i=0; i<5; i++) + for(j=0; j<3; j++) + for(k=0; k<3; k++) + for(l=0; l<6; l++) + if(da_buffer[0][i][j][0][0][k][l][0] != mem3_buffer[0][i][j][0][0][k][l][0]) { + TestErrPrintf("Read different values than written at index 0,%d,%d,0,0,%d,%d,0\n", i, j, k, l); + } - rv = H5Dclose(daid); - if(rv < 0) - { - H5Eprint2(H5E_DEFAULT, stderr); - exit(1); - } + /* ****** Case 4: ****** + * Testing the full selections in the fastest-growing end and the slowest-growing end */ + did = H5Dopen2(file, "multiple_ends", H5P_DEFAULT); + CHECK(did, FAIL, "H5Dopen"); - rv = H5Fclose(fid); - if(rv < 0) - { - H5Eprint2(H5E_DEFAULT, stderr); - exit(1); - } + /* Select the elements in the dataset */ + ret = H5Sselect_hyperslab(sid, H5S_SELECT_SET, mem4_start, mem4_stride, mem4_count, mem4_block); + CHECK(ret, FAIL, "H5Sselect_hyperslab"); + + msid = H5Screate_simple(8, mem4_dims, mem4_dims); + CHECK(msid, FAIL, "H5Screate_simple"); + + ret = H5Sselect_all(msid); + CHECK(ret, FAIL, "H5Sselect_all"); + + ret = H5Dread(did, H5T_NATIVE_INT, msid, sid, H5P_DEFAULT, mem4_buffer); + CHECK(ret, FAIL, "H5Dread"); + + ret = H5Dclose(did); + CHECK(ret, FAIL, "H5Dclose"); + + ret = H5Sclose(msid); + CHECK(ret, FAIL, "H5Sclose"); + + for(i=0; i<4; i++) + for(j=0; j<5; j++) + for(k=0; k<6; k++) + for(l=0; l<2; l++) + if(da_buffer[i][j][0][0][0][0][k][l] != mem4_buffer[i][j][0][0][0][0][k][l]) { + TestErrPrintf("Read different values than written at index %d,%d,0,0,0,0,%d,%d\n", i, j, k, l); + } + + + /* ****** Case 5: ****** + * Testing the full selections in the fastest-growing end and the slowest-growing end, + * and also in the middle dimensions */ + did = H5Dopen2(file, "multiple_ends", H5P_DEFAULT); + CHECK(did, FAIL, "H5Dopen"); + + /* Select the elements in the dataset */ + ret = H5Sselect_hyperslab(sid, H5S_SELECT_SET, mem5_start, mem5_stride, mem5_count, mem5_block); + CHECK(ret, FAIL, "H5Sselect_hyperslab"); + + msid = H5Screate_simple(8, mem5_dims, mem5_dims); + CHECK(msid, FAIL, "H5Screate_simple"); + + ret = H5Sselect_all(msid); + CHECK(ret, FAIL, "H5Sselect_all"); + + ret = H5Dread(did, H5T_NATIVE_INT, msid, sid, H5P_DEFAULT, mem5_buffer); + CHECK(ret, FAIL, "H5Dread"); + + ret = H5Dclose(did); + CHECK(ret, FAIL, "H5Dclose"); + + ret = H5Sclose(msid); + CHECK(ret, FAIL, "H5Sclose"); + + for(i=0; i<4; i++) + for(j=0; j<5; j++) + for(k=0; k<4; k++) + for(l=0; l<2; l++) + for(m=0; m<6; m++) + for(n=0; n<2; n++) + if(da_buffer[i][j][0][k][l][0][m][n] != mem5_buffer[i][j][0][k][l][0][m][n]) { + TestErrPrintf("Read different values than written at index %d,%d,0,%d,%d,0,%d,%d\n", i, j, k, l, m, n); + } + + + ret = H5Sclose(sid); + CHECK(ret, FAIL, "H5Sclose"); + + ret = H5Pclose(plid); + CHECK(ret, FAIL, "H5Pclose"); } + +/**************************************************************** +** +** test_coords(): Main testing routine. +** +****************************************************************/ void test_coords(void) { - int i, j; - - write_dataset(); - - /* 1. - ** Use a rank=2 in memory array. (See above) - */ - memset(mem1_buffer, 0, sizeof(mem1_buffer)); - read_dataset(2, (int*)mem1_buffer, mem1_dims, mem1_start, mem1_count, mem1_stride, mem1_block); - for(i = 0; i < 6; i++) - { - for(j=0; j<2; j++) - if(da_buffer[11][0][i][j] != mem1_buffer[i][j]) - TestErrPrintf(" %3d %3d\n", mem1_buffer[i][j], mem1_buffer[i][j]); - } - - /* 2. - ** Use a rank=4 in memory array. Make the array smaller and select - ** the whole array. (See above) - */ - memset(mem2_buffer, 0, sizeof(mem2_buffer)); - read_dataset(4, (int*)mem2_buffer, mem2_dims, mem2_start, mem2_count, mem2_stride, mem2_block); - for(i = 0; i < 6; i++) - { - for(j=0; j<2; j++) - if(da_buffer[11][0][i][j] != mem2_buffer[0][0][i][j]) - TestErrPrintf(" %3d %3d\n", mem2_buffer[0][0][i][j], mem2_buffer[0][0][i][j]); - } - - /* 3. - ** Use a rank=4 in memory array, but don't select the whole array. (See above) - */ - memset(mem3_buffer, 0, sizeof(mem3_buffer)); - read_dataset(4, (int*)mem3_buffer, mem3_dims, mem3_start, mem3_count, mem3_stride, mem3_block); - for(i = 0; i < 6; i++) - { - for(j=0; j<2; j++) - if(da_buffer[11][0][i][j] != mem3_buffer[0][0][i][j]) - TestErrPrintf(" %3d %3d\n", mem3_buffer[0][0][i][j], mem3_buffer[0][0][i][j]); + hid_t fid; + herr_t ret; /* Generic error return */ - } + fid = H5Fcreate("coord.h5", H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); + CHECK(fid, FAIL, "H5Fcreate"); - /* 4. - ** Use a rank=3 in memory array. (See above) - */ - memset(mem4_buffer, 0, sizeof(mem4_buffer)); - read_dataset(3, (int*)mem4_buffer, mem4_dims, mem4_start, mem4_count, mem4_stride, mem4_block); - for(i = 0; i < 6; i++) - { - for(j=0; j<2; j++) - if(da_buffer[11][0][i][j] != mem4_buffer[0][i][j]) - TestErrPrintf(" %3d %3d\n", mem4_buffer[0][i][j], mem4_buffer[0][i][j]); - } + test_single_end(fid); + test_multiple_ends(fid); + ret = H5Fclose(fid); + CHECK(ret, FAIL, "H5Fclose"); } @@ -398,5 +491,5 @@ void test_coords(void) void cleanup_coords(void) { - remove("coord.hdf"); + remove("coord.h5"); } |