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-rw-r--r--test/tvltypes.c751
1 files changed, 749 insertions, 2 deletions
diff --git a/test/tvltypes.c b/test/tvltypes.c
index bfda390..3d49158 100644
--- a/test/tvltypes.c
+++ b/test/tvltypes.c
@@ -97,6 +97,69 @@ void test_vltypes_free_custom(void *_mem, void *info)
/****************************************************************
**
+** test_vltypes_data_create(): Dataset of VL is supposed to
+** fail when fill value is never written to dataset.
+**
+****************************************************************/
+static void
+test_vltypes_dataset_create(void)
+{
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t dcpl; /* Dataset Property list */
+ hid_t dataset; /* Dataset ID */
+ hsize_t dims1[] = {SPACE1_DIM1};
+ hid_t sid1; /* Dataspace ID */
+ hid_t tid1; /* Datatype ID */
+ herr_t ret; /* Generic return value */
+
+ /* Output message about test being performed */
+ MESSAGE(5, ("Testing Dataset of VL Datatype Functionality\n"));
+
+ /* Create file */
+ fid1 = H5Fcreate(FILENAME, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ CHECK(fid1, FAIL, "H5Fcreate");
+
+ /* Create dataspace for datasets */
+ sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL);
+ CHECK(sid1, FAIL, "H5Screate_simple");
+
+ /* Create a datatype to refer to */
+ tid1 = H5Tvlen_create (H5T_NATIVE_UINT);
+ CHECK(tid1, FAIL, "H5Tvlen_create");
+
+ /* Create dataset property list */
+ dcpl=H5Pcreate(H5P_DATASET_CREATE);
+ CHECK(dcpl, FAIL, "H5Pcreate");
+
+ /* Set fill value writting time to be NEVER */
+ ret=H5Pset_fill_time(dcpl, H5D_FILL_TIME_NEVER);
+ CHECK(ret, FAIL, "H5Pset_fill_time");
+
+ /* Create a dataset, supposed to fail */
+ H5E_BEGIN_TRY {
+ dataset=H5Dcreate(fid1,"Dataset1",tid1,sid1,dcpl);
+ } H5E_END_TRY;
+ VERIFY(dataset, FAIL, "H5Dcreate");
+
+ /* Close datatype */
+ ret = H5Tclose(tid1);
+ CHECK(ret, FAIL, "H5Tclose");
+
+ /* Close disk dataspace */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close dataset transfer property list */
+ ret = H5Pclose(dcpl);
+ CHECK(ret, FAIL, "H5Pclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+}
+
+/****************************************************************
+**
** test_vltypes_vlen_atomic(): Test basic VL datatype code.
** Tests VL datatypes of atomic datatypes
**
@@ -148,6 +211,39 @@ test_vltypes_vlen_atomic(void)
ret=H5Dwrite(dataset,tid1,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata);
CHECK(ret, FAIL, "H5Dwrite");
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close datatype */
+ ret = H5Tclose(tid1);
+ CHECK(ret, FAIL, "H5Tclose");
+
+ /* Close disk dataspace */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+
+
+ /* Open the file for data checking */
+ fid1 = H5Fopen(FILENAME, H5F_ACC_RDONLY, H5P_DEFAULT);
+ CHECK(fid1, FAIL, "H5Fopen");
+
+ /* Open a dataset */
+ dataset=H5Dopen(fid1,"Dataset1");
+ CHECK(dataset, FAIL, "H5Dopen");
+
+ /* Get dataspace for datasets */
+ sid1 = H5Dget_space(dataset);
+ CHECK(sid1, FAIL, "H5Dget_space");
+
+ /* Get datatype for dataset */
+ tid1 = H5Dget_type(dataset);
+ CHECK(tid1, FAIL, "H5Dget_type");
+
/* Change to the custom memory allocation routines for reading VL data */
xfer_pid=H5Pcreate(H5P_DATASET_XFER);
CHECK(xfer_pid, FAIL, "H5Pcreate");
@@ -221,8 +317,167 @@ test_vltypes_vlen_atomic(void)
/****************************************************************
**
+** rewrite_vltypes_vlen_atomic(): check memory leak for basic VL datatype.
+** Check memory leak for VL datatypes of atomic datatypes
+**
+****************************************************************/
+static void
+rewrite_vltypes_vlen_atomic(void)
+{
+ hvl_t wdata[SPACE1_DIM1]; /* Information to write */
+ hvl_t rdata[SPACE1_DIM1]; /* Information read in */
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t dataset; /* Dataset ID */
+ hid_t sid1; /* Dataspace ID */
+ hid_t tid1; /* Datatype ID */
+ hid_t xfer_pid; /* Dataset transfer property list ID */
+ hsize_t size; /* Number of bytes which will be used */
+ unsigned i,j; /* counting variables */
+ size_t mem_used=0; /* Memory used during allocation */
+ int increment=4;
+ herr_t ret; /* Generic return value */
+
+ /* Output message about test being performed */
+ MESSAGE(5, ("Check Memory Leak for Basic Atomic VL Datatype Functionality\n"));
+
+ /* Allocate and initialize VL data to write */
+ for(i=0; i<SPACE1_DIM1; i++) {
+ wdata[i].p=malloc((i+increment)*sizeof(unsigned int));
+ wdata[i].len=i+increment;
+ for(j=0; j<(i+increment); j++)
+ ((unsigned int *)wdata[i].p)[j]=i*20+j;
+ } /* end for */
+
+ /* Open file created in test_vltypes_vlen_atomic() */
+ fid1 = H5Fopen(FILENAME, H5F_ACC_RDWR, H5P_DEFAULT);
+ CHECK(fid1, FAIL, "H5Fopen");
+
+ /* Open the dataset created in test_vltypes_vlen_atomic() */
+ dataset=H5Dopen(fid1,"Dataset1");
+ CHECK(dataset, FAIL, "H5Dopen");
+
+ /* Open dataspace for dataset */
+ sid1 = H5Dget_space(dataset);
+ CHECK(sid1, FAIL, "H5Dget_space");
+
+ /* Get datatype for dataset */
+ tid1 = H5Dget_type(dataset);
+ CHECK(tid1, FAIL, "H5Dget_type");
+
+ /* Write dataset to disk */
+ ret=H5Dwrite(dataset,tid1,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata);
+ CHECK(ret, FAIL, "H5Dwrite");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close datatype */
+ ret = H5Tclose(tid1);
+ CHECK(ret, FAIL, "H5Tclose");
+
+ /* Close disk dataspace */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+
+
+ /* Open the file for data checking */
+ fid1 = H5Fopen(FILENAME, H5F_ACC_RDONLY, H5P_DEFAULT);
+ CHECK(fid1, FAIL, "H5Fopen");
+
+ /* Open a dataset */
+ dataset=H5Dopen(fid1,"Dataset1");
+ CHECK(dataset, FAIL, "H5Dopen");
+
+ /* Get dataspace for datasets */
+ sid1 = H5Dget_space(dataset);
+ CHECK(sid1, FAIL, "H5Dget_space");
+
+ /* Get datatype for dataset */
+ tid1 = H5Dget_type(dataset);
+ CHECK(tid1, FAIL, "H5Dget_type");
+
+ /* Change to the custom memory allocation routines for reading VL data */
+ xfer_pid=H5Pcreate(H5P_DATASET_XFER);
+ CHECK(xfer_pid, FAIL, "H5Pcreate");
+
+ ret=H5Pset_vlen_mem_manager(xfer_pid,test_vltypes_alloc_custom,&mem_used,test_vltypes_free_custom,&mem_used);
+ CHECK(ret, FAIL, "H5Pset_vlen_mem_manager");
+
+ /* Make certain the correct amount of memory will be used */
+ ret=H5Dvlen_get_buf_size(dataset,tid1,sid1,&size);
+ CHECK(ret, FAIL, "H5Dvlen_get_buf_size");
+
+ /* 22 elements allocated = 4+5+6+7 elements for each array position */
+ VERIFY(size,22*sizeof(unsigned int),"H5Dvlen_get_buf_size");
+
+ /* Read dataset from disk */
+ ret=H5Dread(dataset,tid1,H5S_ALL,H5S_ALL,xfer_pid,rdata);
+ CHECK(ret, FAIL, "H5Dread");
+
+ /* Make certain the correct amount of memory has been used */
+ /* 22 elements allocated = 4+5+6+7 elements for each array position */
+ VERIFY(mem_used,22*sizeof(unsigned int),"H5Dread");
+
+ /* Compare data read in */
+ for(i=0; i<SPACE1_DIM1; i++) {
+ if(wdata[i].len!=rdata[i].len) {
+ num_errs++;
+ printf("VL data length don't match!, wdata[%d].len=%d, rdata[%d].len=%d\n",(int)i,(int)wdata[i].len,(int)i,(int)rdata[i].len);
+ continue;
+ } /* end if */
+ for(j=0; j<rdata[i].len; j++) {
+ if( ((unsigned int *)wdata[i].p)[j] != ((unsigned int *)rdata[i].p)[j] ) {
+ num_errs++;
+ printf("VL data values don't match!, wdata[%d].p[%d]=%d, rdata[%d].p[%d]=%d\n",(int)i,(int)j, (int)((unsigned int *)wdata[i].p)[j], (int)i,(int)j, (int)((unsigned int *)rdata[i].p)[j]);
+ continue;
+ } /* end if */
+ } /* end for */
+ } /* end for */
+
+ /* Reclaim the read VL data */
+ ret=H5Dvlen_reclaim(tid1,sid1,xfer_pid,rdata);
+ CHECK(ret, FAIL, "H5Dvlen_reclaim");
+
+ /* Make certain the VL memory has been freed */
+ VERIFY(mem_used,0,"H5Dvlen_reclaim");
+
+ /* Reclaim the write VL data */
+ ret=H5Dvlen_reclaim(tid1,sid1,H5P_DEFAULT,wdata);
+ CHECK(ret, FAIL, "H5Dvlen_reclaim");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close datatype */
+ ret = H5Tclose(tid1);
+ CHECK(ret, FAIL, "H5Tclose");
+
+ /* Close disk dataspace */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close dataset transfer property list */
+ ret = H5Pclose(xfer_pid);
+ CHECK(ret, FAIL, "H5Pclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+
+} /* end rewrite_vltypes_vlen_atomic() */
+
+
+
+/****************************************************************
+**
** test_vltypes_vlen_compound(): Test basic VL datatype code.
-** Tests VL datatypes of compound datatypes
+** Test VL datatypes of compound datatypes
**
****************************************************************/
static void
@@ -370,6 +625,154 @@ test_vltypes_vlen_compound(void)
/****************************************************************
**
+** rewrite_vltypes_vlen_compound(): Check memory leak for basic VL datatype.
+** Checks memory leak for VL datatypes of compound datatypes
+**
+****************************************************************/
+static void
+rewrite_vltypes_vlen_compound(void)
+{
+ typedef struct { /* Struct that the VL sequences are composed of */
+ int i;
+ float f;
+ } s1;
+ hvl_t wdata[SPACE1_DIM1]; /* Information to write */
+ hvl_t rdata[SPACE1_DIM1]; /* Information read in */
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t dataset; /* Dataset ID */
+ hid_t sid1; /* Dataspace ID */
+ hid_t tid1, tid2; /* Datatype IDs */
+ hid_t xfer_pid; /* Dataset transfer property list ID */
+ hsize_t size; /* Number of bytes which will be used */
+ unsigned i,j; /* counting variables */
+ size_t mem_used=0; /* Memory used during allocation */
+ int increment=4;
+ herr_t ret; /* Generic return value */
+
+ /* Output message about test being performed */
+ MESSAGE(5, ("Check Memory Leak for Basic Compound VL Datatype Functionality\n"));
+
+ /* Allocate and initialize VL data to write */
+ for(i=0; i<SPACE1_DIM1; i++) {
+ wdata[i].p=malloc((i+increment)*sizeof(s1));
+ wdata[i].len=i+increment;
+ for(j=0; j<(i+increment); j++) {
+ ((s1 *)wdata[i].p)[j].i=i*40+j;
+ ((s1 *)wdata[i].p)[j].f=(float)((i*60+j)/3.0);
+ } /* end for */
+ } /* end for */
+
+ /* Create file */
+ fid1 = H5Fopen(FILENAME, H5F_ACC_RDWR, H5P_DEFAULT);
+ CHECK(fid1, FAIL, "H5Fopen");
+
+ /* Create the base compound type */
+ tid2 = H5Tcreate(H5T_COMPOUND, sizeof(s1));
+ CHECK(tid2, FAIL, "H5Tcreate");
+
+ ret=H5Tinsert(tid2, "i", HOFFSET(s1, i), H5T_NATIVE_INT);
+ CHECK(ret, FAIL, "H5Tinsert");
+ ret=H5Tinsert(tid2, "f", HOFFSET(s1, f), H5T_NATIVE_FLOAT);
+ CHECK(ret, FAIL, "H5Tinsert");
+
+ /* Create a datatype to refer to */
+ tid1 = H5Tvlen_create (tid2);
+ CHECK(tid1, FAIL, "H5Tvlen_create");
+
+ /* Create a dataset */
+ dataset=H5Dopen(fid1,"Dataset1");
+ CHECK(dataset, FAIL, "H5Dopen");
+
+ /* Create dataspace for datasets */
+ sid1 = H5Dget_space(dataset);
+ CHECK(sid1, FAIL, "H5Dget_space");
+
+ /* Write dataset to disk */
+ ret=H5Dwrite(dataset,tid1,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata);
+ CHECK(ret, FAIL, "H5Dwrite");
+
+ /* Change to the custom memory allocation routines for reading VL data */
+ xfer_pid=H5Pcreate(H5P_DATASET_XFER);
+ CHECK(xfer_pid, FAIL, "H5Pcreate");
+
+ ret=H5Pset_vlen_mem_manager(xfer_pid,test_vltypes_alloc_custom,&mem_used,test_vltypes_free_custom,&mem_used);
+ CHECK(ret, FAIL, "H5Pset_vlen_mem_manager");
+
+ /* Make certain the correct amount of memory will be used */
+ ret=H5Dvlen_get_buf_size(dataset,tid1,sid1,&size);
+ CHECK(ret, FAIL, "H5Dvlen_get_buf_size");
+
+ /* 22 elements allocated = 4 + 5 + 6 + 7 elements for each array position */
+ VERIFY(size,22*sizeof(s1),"H5Dvlen_get_buf_size");
+
+ /* Read dataset from disk */
+ ret=H5Dread(dataset,tid1,H5S_ALL,H5S_ALL,xfer_pid,rdata);
+ CHECK(ret, FAIL, "H5Dread");
+
+ /* Make certain the correct amount of memory has been used */
+ /* 22 elements allocated = 4 + 5 + 6 + 7 elements for each array position */
+ VERIFY(mem_used,22*sizeof(s1),"H5Dread");
+
+ /* Compare data read in */
+ for(i=0; i<SPACE1_DIM1; i++) {
+ if(wdata[i].len!=rdata[i].len) {
+ num_errs++;
+ printf("VL data length don't match!, wdata[%d].len=%d, rdata[%d].len=%d\n",(int)i,(int)wdata[i].len,(int)i,(int)rdata[i].len);
+ continue;
+ } /* end if */
+ for(j=0; j<rdata[i].len; j++) {
+ if( ((s1 *)wdata[i].p)[j].i != ((s1 *)rdata[i].p)[j].i ) {
+ num_errs++;
+ printf("VL data values don't match!, wdata[%d].p[%d].i=%d, rdata[%d].p[%d].i=%d\n",(int)i,(int)j, (int)((s1 *)wdata[i].p)[j].i, (int)i,(int)j, (int)((s1 *)rdata[i].p)[j].i);
+ continue;
+ } /* end if */
+ if( ((s1 *)wdata[i].p)[j].f != ((s1 *)rdata[i].p)[j].f ) {
+ num_errs++;
+ printf("VL data values don't match!, wdata[%d].p[%d].f=%f, rdata[%d].p[%d].f=%f\n",(int)i,(int)j, (double)((s1 *)wdata[i].p)[j].f, (int)i,(int)j, (double)((s1 *)rdata[i].p)[j].f);
+ continue;
+ } /* end if */
+ } /* end for */
+ } /* end for */
+
+ /* Reclaim the VL data */
+ ret=H5Dvlen_reclaim(tid1,sid1,xfer_pid,rdata);
+ CHECK(ret, FAIL, "H5Dvlen_reclaim");
+
+ /* Make certain the VL memory has been freed */
+ VERIFY(mem_used,0,"H5Dvlen_reclaim");
+
+ /* Reclaim the write VL data */
+ ret=H5Dvlen_reclaim(tid1,sid1,H5P_DEFAULT,wdata);
+ CHECK(ret, FAIL, "H5Dvlen_reclaim");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close datatype */
+ ret = H5Tclose(tid1);
+ CHECK(ret, FAIL, "H5Tclose");
+
+ /* Close datatype */
+ ret = H5Tclose(tid2);
+ CHECK(ret, FAIL, "H5Tclose");
+
+ /* Close disk dataspace */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close dataset transfer property list */
+ ret = H5Pclose(xfer_pid);
+ CHECK(ret, FAIL, "H5Pclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+
+} /* end rewrite_vltypes_vlen_compound() */
+
+/****************************************************************
+**
** test_vltypes_compound_vlen_atomic(): Test basic VL datatype code.
** Tests compound datatypes with VL datatypes of atomic datatypes.
**
@@ -527,6 +930,165 @@ test_vltypes_compound_vlen_atomic(void)
/****************************************************************
**
+** rewrite_vltypes_compound_vlen_atomic(): Check memory leak for
+** basic VL datatype code.
+** Check memory leak for compound datatypes with VL datatypes
+** of atomic datatypes.
+**
+****************************************************************/
+static void
+rewrite_vltypes_compound_vlen_atomic(void)
+{
+ typedef struct { /* Struct that the VL sequences are composed of */
+ int i;
+ float f;
+ hvl_t v;
+ } s1;
+ s1 wdata[SPACE1_DIM1]; /* Information to write */
+ s1 rdata[SPACE1_DIM1]; /* Information read in */
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t dataset; /* Dataset ID */
+ hid_t sid1; /* Dataspace ID */
+ hid_t tid1, tid2; /* Datatype IDs */
+ hid_t xfer_pid; /* Dataset transfer property list ID */
+ hsize_t size; /* Number of bytes which will be used */
+ unsigned i,j; /* counting variables */
+ size_t mem_used=0; /* Memory used during allocation */
+ int increment=4;
+ herr_t ret; /* Generic return value */
+
+ /* Output message about test being performed */
+ MESSAGE(5, ("Checking memory leak for compound datatype with VL Atomic Datatype Component Functionality\n"));
+
+ /* Allocate and initialize VL data to write */
+ for(i=0; i<SPACE1_DIM1; i++) {
+ wdata[i].i=i*40;
+ wdata[i].f=(float)((i*50)/3.0);
+ wdata[i].v.p=malloc((i+increment)*sizeof(unsigned int));
+ wdata[i].v.len=i+increment;
+ for(j=0; j<(i+increment); j++)
+ ((unsigned int *)wdata[i].v.p)[j]=i*60+j;
+ } /* end for */
+
+ /* Create file */
+ fid1 = H5Fopen(FILENAME, H5F_ACC_RDWR, H5P_DEFAULT);
+ CHECK(fid1, FAIL, "H5Fopen");
+
+ /* Create a VL datatype to refer to */
+ tid1 = H5Tvlen_create (H5T_NATIVE_UINT);
+ CHECK(tid1, FAIL, "H5Tvlen_create");
+
+ /* Create the base compound type */
+ tid2 = H5Tcreate(H5T_COMPOUND, sizeof(s1));
+ CHECK(tid2, FAIL, "H5Tcreate");
+
+ /* Insert fields */
+ ret=H5Tinsert(tid2, "i", HOFFSET(s1, i), H5T_NATIVE_INT);
+ CHECK(ret, FAIL, "H5Tinsert");
+ ret=H5Tinsert(tid2, "f", HOFFSET(s1, f), H5T_NATIVE_FLOAT);
+ CHECK(ret, FAIL, "H5Tinsert");
+ ret=H5Tinsert(tid2, "v", HOFFSET(s1, v), tid1);
+ CHECK(ret, FAIL, "H5Tinsert");
+
+ /* Create a dataset */
+ dataset=H5Dopen(fid1,"Dataset1");
+ CHECK(dataset, FAIL, "H5Dopen");
+
+ /* Create dataspace for datasets */
+ sid1 = H5Dget_space(dataset);
+ CHECK(sid1, FAIL, "H5Dget_space");
+
+ /* Write dataset to disk */
+ ret=H5Dwrite(dataset,tid2,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata);
+ CHECK(ret, FAIL, "H5Dwrite");
+
+ /* Change to the custom memory allocation routines for reading VL data */
+ xfer_pid=H5Pcreate(H5P_DATASET_XFER);
+ CHECK(xfer_pid, FAIL, "H5Pcreate");
+
+ ret=H5Pset_vlen_mem_manager(xfer_pid,test_vltypes_alloc_custom,&mem_used,test_vltypes_free_custom,&mem_used);
+ CHECK(ret, FAIL, "H5Pset_vlen_mem_manager");
+
+ /* Make certain the correct amount of memory will be used */
+ ret=H5Dvlen_get_buf_size(dataset,tid2,sid1,&size);
+ CHECK(ret, FAIL, "H5Dvlen_get_buf_size");
+
+ /* 22 elements allocated = 4+5+6+7 elements for each array position */
+ VERIFY(size, 22*sizeof(unsigned int),"H5Dvlen_get_buf_size");
+
+ /* Read dataset from disk */
+ ret=H5Dread(dataset,tid2,H5S_ALL,H5S_ALL,xfer_pid,rdata);
+ CHECK(ret, FAIL, "H5Dread");
+
+ /* Make certain the correct amount of memory has been used */
+ /* 22 elements allocated = 4+5+6+7 elements for each array position */
+ VERIFY(mem_used,22*sizeof(unsigned int),"H5Dread");
+
+ /* Compare data read in */
+ for(i=0; i<SPACE1_DIM1; i++) {
+ if(wdata[i].i!=rdata[i].i) {
+ num_errs++;
+ printf("Integer components don't match!, wdata[%d].i=%d, rdata[%d].i=%d\n",(int)i,(int)wdata[i].i,(int)i,(int)rdata[i].i);
+ continue;
+ } /* end if */
+ if(wdata[i].f!=rdata[i].f) {
+ num_errs++;
+ printf("Float components don't match!, wdata[%d].f=%f, rdata[%d].f=%f\n",(int)i,(double)wdata[i].f,(int)i,(double)rdata[i].f);
+ continue;
+ } /* end if */
+ if(wdata[i].v.len!=rdata[i].v.len) {
+ num_errs++;
+ printf("VL data length don't match!, wdata[%d].v.len=%d, rdata[%d].v.len=%d\n",(int)i,(int)wdata[i].v.len,(int)i,(int)rdata[i].v.len);
+ continue;
+ } /* end if */
+ for(j=0; j<rdata[i].v.len; j++) {
+ if( ((unsigned int *)wdata[i].v.p)[j] != ((unsigned int *)rdata[i].v.p)[j] ) {
+ num_errs++;
+ printf("VL data values don't match!, wdata[%d].v.p[%d]=%d, rdata[%d].v.p[%d]=%d\n",(int)i,(int)j, (int)((unsigned int *)wdata[i].v.p)[j], (int)i,(int)j, (int)((unsigned int *)rdata[i].v.p)[j]);
+ continue;
+ } /* end if */
+ } /* end for */
+ } /* end for */
+
+ /* Reclaim the VL data */
+ ret=H5Dvlen_reclaim(tid2,sid1,xfer_pid,rdata);
+ CHECK(ret, FAIL, "H5Dvlen_reclaim");
+
+ /* Make certain the VL memory has been freed */
+ VERIFY(mem_used,0,"H5Dvlen_reclaim");
+
+ /* Reclaim the write VL data */
+ ret=H5Dvlen_reclaim(tid2,sid1,H5P_DEFAULT,wdata);
+ CHECK(ret, FAIL, "H5Dvlen_reclaim");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close datatype */
+ ret = H5Tclose(tid2);
+ CHECK(ret, FAIL, "H5Tclose");
+
+ /* Close datatype */
+ ret = H5Tclose(tid1);
+ CHECK(ret, FAIL, "H5Tclose");
+
+ /* Close disk dataspace */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close dataset transfer property list */
+ ret = H5Pclose(xfer_pid);
+ CHECK(ret, FAIL, "H5Pclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+
+} /* end rewrite_vltypes_compound_vlen_atomic() */
+
+/****************************************************************
+**
** test_vltypes_vlen_vlen_atomic(): Test basic VL datatype code.
** Tests VL datatype with VL datatypes of atomic datatypes.
**
@@ -743,6 +1305,186 @@ test_vltypes_vlen_vlen_atomic(void)
/****************************************************************
**
+** rewrite_vltypes_vlen_vlen_atomic(): Test basic VL datatype code.
+** Tests VL datatype with VL datatypes of atomic datatypes.
+**
+****************************************************************/
+static void
+rewrite_vltypes_vlen_vlen_atomic(void)
+{
+ hvl_t wdata[SPACE1_DIM1]; /* Information to write */
+ hvl_t rdata[SPACE1_DIM1]; /* Information read in */
+ hvl_t *t1, *t2; /* Temporary pointer to VL information */
+ hid_t fid1; /* HDF5 File IDs */
+ hid_t dataset; /* Dataset ID */
+ hid_t sid1; /* Dataspace ID */
+ hid_t tid2; /* Datatype IDs */
+ hid_t xfer_pid; /* Dataset transfer property list ID */
+ hsize_t size; /* Number of bytes which will be used */
+ unsigned i,j,k; /* counting variables */
+ size_t mem_used=0; /* Memory used during allocation */
+ herr_t ret; /* Generic return value */
+
+ /* Output message about test being performed */
+ MESSAGE(5, ("Check memory leak for VL Datatypes with VL Atomic Datatype Component Functionality\n"));
+
+ /* Allocate and initialize VL data to write */
+ for(i=0; i<SPACE1_DIM1; i++) {
+ wdata[i].p=malloc((i+1)*sizeof(hvl_t));
+ if(wdata[i].p==NULL) {
+ printf("Cannot allocate memory for VL data! i=%u\n",i);
+ num_errs++;
+ return;
+ } /* end if */
+ wdata[i].len=i+1;
+ for(t1=wdata[i].p,j=0; j<(i+1); j++, t1++) {
+ t1->p=malloc((j+1)*sizeof(unsigned int));
+ if(t1->p==NULL) {
+ printf("Cannot allocate memory for VL data! i=%u, j=%u\n",i,j);
+ num_errs++;
+ return;
+ } /* end if */
+ t1->len=j+1;
+ for(k=0; k<(j+1); k++)
+ ((unsigned int *)t1->p)[k]=i*100+j*10+k;
+ } /* end for */
+ } /* end for */
+
+ /* Open file */
+ fid1 = H5Fopen(FILENAME, H5F_ACC_RDWR, H5P_DEFAULT);
+ CHECK(fid1, FAIL, "H5Fopen");
+
+ /* Open the dataset */
+ dataset=H5Dopen(fid1,"Dataset1");
+ CHECK(dataset, FAIL, "H5Dopen");
+
+ /* Get dataspace for datasets */
+ sid1 = H5Dget_space(dataset);
+ CHECK(sid1, FAIL, "H5Dget_space");
+
+ /* Open datatype of the dataset */
+ tid2 = H5Dget_type(dataset);
+ CHECK(tid2, FAIL, "H5Dget_type");
+
+ /* Write dataset to disk */
+ ret=H5Dwrite(dataset,tid2,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata);
+ CHECK(ret, FAIL, "H5Dwrite");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close datatype */
+ ret = H5Tclose(tid2);
+ CHECK(ret, FAIL, "H5Tclose");
+
+ /* Close disk dataspace */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+
+
+ /* Open the file for data checking */
+ fid1 = H5Fopen(FILENAME, H5F_ACC_RDONLY, H5P_DEFAULT);
+ CHECK(fid1, FAIL, "H5Fopen");
+
+ /* Open a dataset */
+ dataset=H5Dopen(fid1,"Dataset1");
+ CHECK(dataset, FAIL, "H5Dopen");
+
+ /* Get dataspace for datasets */
+ sid1 = H5Dget_space(dataset);
+ CHECK(sid1, FAIL, "H5Dget_space");
+
+ /* Get datatype for dataset */
+ tid2 = H5Dget_type(dataset);
+ CHECK(tid2, FAIL, "H5Dget_type");
+
+ /* Change to the custom memory allocation routines for reading VL data */
+ xfer_pid=H5Pcreate(H5P_DATASET_XFER);
+ CHECK(xfer_pid, FAIL, "H5Pcreate");
+
+ ret=H5Pset_vlen_mem_manager(xfer_pid,test_vltypes_alloc_custom,&mem_used,test_vltypes_free_custom,&mem_used);
+ CHECK(ret, FAIL, "H5Pset_vlen_mem_manager");
+
+ /* Make certain the correct amount of memory was used */
+ ret=H5Dvlen_get_buf_size(dataset,tid2,sid1,&size);
+ CHECK(ret, FAIL, "H5Dvlen_get_buf_size");
+
+ /* 10 hvl_t elements allocated = 1 + 2 + 3 + 4 elements for each array position */
+ /* 20 unsigned int elements allocated = 1 + 3 + 6 + 10 elements */
+ VERIFY(size,((SPACE1_DIM1*(SPACE1_DIM1+1))/2)*sizeof(hvl_t)+vlen_size_func(SPACE1_DIM1)*sizeof(unsigned int),"H5Dvlen_get_buf_size");
+
+ /* Read dataset from disk */
+ ret=H5Dread(dataset,tid2,H5S_ALL,H5S_ALL,xfer_pid,rdata);
+ CHECK(ret, FAIL, "H5Dread");
+
+ /* Make certain the correct amount of memory has been used */
+ /* 10 hvl_t elements allocated = 1 + 2 + 3 + 4 elements for each array position */
+ /* 20 unsigned int elements allocated = 1 + 3 + 6 + 10 elements */
+ VERIFY(mem_used,((SPACE1_DIM1*(SPACE1_DIM1+1))/2)*sizeof(hvl_t)+vlen_size_func(SPACE1_DIM1)*sizeof(unsigned int),"H5Dread");
+
+ /* Compare data read in */
+ for(i=0; i<SPACE1_DIM1; i++) {
+ if(wdata[i].len!=rdata[i].len) {
+ num_errs++;
+ printf("VL data length don't match!, wdata[%d].len=%d, rdata[%d].len=%d\n",(int)i,(int)wdata[i].len,(int)i,(int)rdata[i].len);
+ continue;
+ } /* end if */
+ for(t1=wdata[i].p, t2=rdata[i].p, j=0; j<rdata[i].len; j++, t1++, t2++)
+{
+ if(t1->len!=t2->len) {
+ num_errs++;
+ printf("VL data length don't match!, i=%d, j=%d, t1->len=%d, t2->len=%d\n",(int)i,(int)j,(int)t1->len,(int)t2->len);
+ continue;
+ } /* end if */
+ for(k=0; k<t2->len; k++) {
+ if( ((unsigned int *)t1->p)[k] != ((unsigned int *)t2->p)[k] ) { num_errs++;
+ printf("VL data values don't match!, t1->p[%d]=%d, t2->p[%d]=%d\n",(int)k, (int)((unsigned int *)t1->p)[k], (int)k, (int)((unsigned int *)t2->p)[k]);
+ continue;
+ } /* end if */
+ } /* end for */
+ } /* end for */
+ } /* end for */
+
+ /* Reclaim all the (nested) VL data */
+ ret=H5Dvlen_reclaim(tid2,sid1,xfer_pid,rdata);
+ CHECK(ret, FAIL, "H5Dvlen_reclaim");
+
+ /* Make certain the VL memory has been freed */
+ VERIFY(mem_used,0,"H5Dvlen_reclaim");
+
+ /* Reclaim the write VL data */
+ ret=H5Dvlen_reclaim(tid2,sid1,H5P_DEFAULT,wdata);
+ CHECK(ret, FAIL, "H5Dvlen_reclaim");
+
+ /* Close Dataset */
+ ret = H5Dclose(dataset);
+ CHECK(ret, FAIL, "H5Dclose");
+
+ /* Close datatype */
+ ret = H5Tclose(tid2);
+ CHECK(ret, FAIL, "H5Tclose");
+
+ /* Close disk dataspace */
+ ret = H5Sclose(sid1);
+ CHECK(ret, FAIL, "H5Sclose");
+
+ /* Close dataset transfer property list */
+ ret = H5Pclose(xfer_pid);
+ CHECK(ret, FAIL, "H5Pclose");
+
+ /* Close file */
+ ret = H5Fclose(fid1);
+ CHECK(ret, FAIL, "H5Fclose");
+
+} /* end rewrite_vltypes_vlen_vlen_atomic() */
+
+/****************************************************************
+**
** test_vltypes(): Main VL datatype testing routine.
**
****************************************************************/
@@ -753,10 +1495,16 @@ test_vltypes(void)
MESSAGE(5, ("Testing Variable-Length Datatypes\n"));
/* These next tests use the same file */
+ test_vltypes_dataset_create(); /* Check dataset of VL when fill value
+ * won't be rewritten to it.*/
test_vltypes_vlen_atomic(); /* Test VL atomic datatypes */
+ rewrite_vltypes_vlen_atomic(); /* Check VL memory leak */
test_vltypes_vlen_compound(); /* Test VL compound datatypes */
+ rewrite_vltypes_vlen_compound(); /* Check VL memory leak */
test_vltypes_compound_vlen_atomic(); /* Test compound datatypes with VL atomic components */
+ rewrite_vltypes_compound_vlen_atomic(); /* Check VL memory leak */
test_vltypes_vlen_vlen_atomic(); /* Test VL datatype with VL atomic components */
+ rewrite_vltypes_vlen_vlen_atomic(); /* Check VL memory leak */
} /* test_vltypes() */
@@ -779,4 +1527,3 @@ cleanup_vltypes(void)
{
remove(FILENAME);
}
-