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-rw-r--r--configure.ac6
-rw-r--r--doxygen/Doxyfile.in42
-rw-r--r--doxygen/dox/PredefinedDatatypeTables.dox22
-rw-r--r--doxygen/dox/RFC.dox196
-rw-r--r--doxygen/dox/ReferenceManual.dox139
-rw-r--r--doxygen/examples/menus/core_menu.md (renamed from doxygen/examples/core_menu.md)0
-rw-r--r--doxygen/examples/menus/fortran_menu.md (renamed from doxygen/examples/fortran_menu.md)0
-rw-r--r--doxygen/examples/menus/high_level_menu.md (renamed from doxygen/examples/high_level_menu.md)0
-rw-r--r--doxygen/examples/menus/java_menu.md (renamed from doxygen/examples/java_menu.md)0
-rw-r--r--doxygen/examples/tables/predefinedDatatypes.dox629
-rw-r--r--doxygen/hdf5doxy_layout.xml1
-rw-r--r--src/H5Tmodule.h34
12 files changed, 902 insertions, 167 deletions
diff --git a/configure.ac b/configure.ac
index ab9897b..d66d473 100644
--- a/configure.ac
+++ b/configure.ac
@@ -1239,9 +1239,11 @@ if test "X$HDF5_DOXYGEN" = "Xyes"; then
DOXYGEN_PACKAGE=${PACKAGE_NAME}
DOXYGEN_VERSION_STRING=${PACKAGE_VERSION}
DOXYGEN_DIR='$(SRCDIR)/doxygen'
+ DOXYGEN_INCLUDE_ALIASES_PATH='$(SRCDIR)/doxygen'
DOXYGEN_INCLUDE_ALIASES='$(SRCDIR)/doxygen/aliases'
+ DOXYGEN_VERBATIM_VARS='DOXYGEN_INCLUDE_ALIASES'
DOXYGEN_PROJECT_LOGO='$(SRCDIR)/doxygen/img/HDFG-logo.png'
- DOXYGEN_PROJECT_BRIEF=''
+ DOXYGEN_PROJECT_BRIEF='API Reference'
DOXYGEN_INPUT_DIRECTORY='$(SRCDIR) $(SRCDIR)/doxygen/dox'
DOXYGEN_OPTIMIZE_OUTPUT_FOR_C=YES
DOXYGEN_MACRO_EXPANSION=YES
@@ -1258,7 +1260,7 @@ if test "X$HDF5_DOXYGEN" = "Xyes"; then
DOXYGEN_SEARCHENGINE_URL=
DOXYGEN_STRIP_FROM_PATH='$(SRCDIR)'
DOXYGEN_STRIP_FROM_INC_PATH='$(SRCDIR)'
- DOXYGEN_PREDEFINED='H5_HAVE_DIRECT H5_HAVE_LIBHDFS H5_HAVE_MAP_API H5_HAVE_PARALLEL H5_HAVE_ROS3_VFD H5_DOXYGEN_FORTRAN'
+ DOXYGEN_PREDEFINED='H5_HAVE_DIRECT H5_HAVE_LIBHDFS H5_HAVE_MAP_API H5_HAVE_PARALLEL H5_HAVE_ROS3_VFD H5_DOXYGEN_FORTRAN H5_HAVE_SUBFILING_VFD H5_HAVE_IOC_VFD'
DX_INIT_DOXYGEN([HDF5], [./doxygen/Doxyfile], [hdf5lib_docs])
fi
diff --git a/doxygen/Doxyfile.in b/doxygen/Doxyfile.in
index 08f5545..393507c 100644
--- a/doxygen/Doxyfile.in
+++ b/doxygen/Doxyfile.in
@@ -853,34 +853,20 @@ INPUT_ENCODING = UTF-8
# C comment), *.py, *.pyw, *.f90, *.f95, *.f03, *.f08, *.f18, *.f, *.for, *.vhd,
# *.vhdl, *.ucf, *.qsf and *.ice.
-FILE_PATTERNS = H5*public.h \
- H5*module.h \
- H5*develop.h \
- H5FDcore.h \
- H5FDdirect.h \
- H5FDfamily.h \
- H5FDhdfs.h \
- H5FDioc.h \
- H5FDlog.h \
- H5FDmirror.h \
- H5FDmpi.h \
- H5FDmpio.h \
- H5FDmulti.h \
- H5FDros3.h \
- H5FDsec2.h \
- H5FDsplitter.h \
- H5FDstdio.h \
- H5FDsubfiling.h \
- H5FDwindows.h \
- H5VLconnector.h \
- H5VLconnector_passthru.h \
- H5VLnative.h \
- H5Zdevelop.h \
- H5version.h \
- H5*.java \
- HDF*.java \
- *.F90 \
- *.dox
+FILE_PATTERNS = H5*public.h H5*module.h H5*develop.h H5FD*.h \
+ H5VLconnector.h H5VLconnector_passthru.h H5VLnative.h \
+ H5Zdevelop.h \
+ H5version.h \
+ H5*.java \
+ HDF*.java \
+ *.F90 \
+ *.dox \
+ H5Cpp.h H5AbstractDs.h H5AtomType.h H5Attribute.h H5CommonFG.h H5CompType.h \
+ H5DataSet.h H5DataSpace.h H5DataType.h H5OcreatProp.h H5DaccProp.h H5DcreatProp.h \
+ H5DxferProp.h H5EnumType.h H5Exception.h H5FaccProp.h H5FcreatProp.h H5File.h \
+ H5FloatType.h H5Group.h H5IdComponent.h H5Include.h H5IntType.h H5LcreatProp.h \
+ H5LaccProp.h H5Library.h H5Location.h H5Object.h H5PredType.h H5PropList.h H5StrType.h \
+ H5ArrayType.h H5VarLenType.h
# The RECURSIVE tag can be used to specify whether or not subdirectories should
# be searched for input files as well.
diff --git a/doxygen/dox/PredefinedDatatypeTables.dox b/doxygen/dox/PredefinedDatatypeTables.dox
new file mode 100644
index 0000000..fbafa94
--- /dev/null
+++ b/doxygen/dox/PredefinedDatatypeTables.dox
@@ -0,0 +1,22 @@
+/** \page predefined_datatypes_tables HDF5 Predefined Datatypes
+ *
+ * The following datatypes are predefined in HDF5.
+ *
+ * \snippet{doc} tables/predefinedDatatypes.dox predefined_ieee_datatypes_table
+ *
+ * \snippet{doc} tables/predefinedDatatypes.dox predefined_std_datatypes_table
+ *
+ * \snippet{doc} tables/predefinedDatatypes.dox predefined_unix_datatypes_table
+ *
+ * \snippet{doc} tables/predefinedDatatypes.dox predefined_string_datatypes_table
+ *
+ * \snippet{doc} tables/predefinedDatatypes.dox predefined_intel_datatypes_table
+ *
+ * \snippet{doc} tables/predefinedDatatypes.dox predefined_dec_datatypes_table
+ *
+ * \snippet{doc} tables/predefinedDatatypes.dox predefined_mips_datatypes_table
+ *
+ * \snippet{doc} tables/predefinedDatatypes.dox predefined_native_datatypes_table
+ *
+ * \snippet{doc} tables/predefinedDatatypes.dox predefined_c9x_datatypes_table
+ */
diff --git a/doxygen/dox/RFC.dox b/doxygen/dox/RFC.dox
index 134a221..1b1141b 100644
--- a/doxygen/dox/RFC.dox
+++ b/doxygen/dox/RFC.dox
@@ -1,104 +1,104 @@
/** \page RFC RFCs
<table>
-<tr><th>RFC ID</th><th>Title</th><th>Comments</th></tr>
-<tr> <td>2022-08-19</td> <td>\ref_rfc20220819</td> <td></td></tr>
-<tr> <td>2021-05-28</td> <td>\ref_rfc20210528</td> <td></td></tr>
-<tr> <td>2021-02-19</td> <td>\ref_rfc20210219</td> <td></td></tr>
-<tr> <td>2020-02-13</td> <td>\ref_rfc20200213</td> <td></td></tr>
-<tr> <td>2020-02-10</td> <td>\ref_rfc20200210</td> <td></td></tr>
-<tr> <td>2019-09-23</td> <td>\ref_rfc20190923</td> <td></td></tr>
-<tr> <td>2019-07-15</td> <td>\ref_rfc20190715</td> <td></td> </tr>
-<tr> <td>2019-04-10</td> <td>\ref_rfc20190410</td> <td></td> </tr>
-<tr> <td>2018-12-31</td> <td>\ref_rfc20181231</td> <td></td> </tr>
-<tr> <td>2018-12-20</td> <td>\ref_rfc20181220</td> <td></td> </tr>
-<tr> <td>2018-08-30</td> <td>\ref_rfc20180830</td> <td></td> </tr>
-<tr> <td>2018-08-29</td> <td>\ref_rfc20180829</td> <td></td> </tr>
-<tr> <td>2018-08-15</td> <td>\ref_rfc20180815</td> <td></td> </tr>
-<tr> <td>2018-07-12</td> <td>\ref_rfc20180712</td> <td></td> </tr>
-<tr> <td>2018-06-20</td> <td>\ref_rfc20180620</td> <td></td> </tr>
-<tr> <td>2018-06-10</td> <td>\ref_rfc20180610</td> <td></td> </tr>
-<tr> <td>2018-03-21</td> <td>\ref_rfc20180321</td> <td></td> </tr>
-<tr> <td>2018-01-25</td> <td>\ref_rfc20180125</td> <td></td> </tr>
-<tr> <td>2017-07-07</td> <td>\ref_rfc20170707</td> <td></td> </tr>
-<tr> <td>2016-01-05</td> <td>\ref_rfc20160105</td> <td></td> </tr>
-<tr> <td>2015-09-15</td> <td>\ref_rfc20150915</td> <td></td> </tr>
-<tr> <td>2015-07-09</td> <td>\ref_rfc20150709</td> <td></td> </tr>
-<tr> <td>2015-06-15</td> <td>\ref_rfc20150615</td> <td></td> </tr>
-<tr> <td>2015-04-29</td> <td>\ref_rfc20150429</td> <td></td> </tr>
-<tr> <td>2015-04-24</td> <td>\ref_rfc20150424</td> <td></td> </tr>
-<tr> <td>2015-04-23</td> <td>\ref_rfc20150423</td> <td></td> </tr>
-<tr> <td>2015-03-01</td> <td>\ref_rfc20150301</td> <td></td> </tr>
-<tr> <td>2015-02-12</td> <td>\ref_rfc20150212</td> <td></td> </tr>
-<tr> <td>2015-02-05</td> <td>\ref_rfc20150205</td> <td></td> </tr>
-<tr> <td>2015-02-02</td> <td>\ref_rfc20150202</td> <td></td> </tr>
-<tr> <td>2014-12-10</td> <td>\ref_rfc20141210</td> <td></td> </tr>
-<tr> <td>2014-12-01</td> <td>\ref_rfc20141201</td> <td></td> </tr>
-<tr> <td>2014-09-16</td> <td>\ref_rfc20140916</td> <td></td> </tr>
-<tr> <td>2014-08-27</td> <td>\ref_rfc20140827</td> <td></td> </tr>
-<tr> <td>2014-07-29</td> <td>\ref_rfc20140729</td> <td></td> </tr>
-<tr> <td>2014-07-22</td> <td>\ref_rfc20140722</td> <td></td> </tr>
-<tr> <td>2014-07-17</td> <td>\ref_rfc20140717</td> <td></td> </tr>
-<tr> <td>2014-07-07</td> <td>\ref_rfc20140707</td> <td></td> </tr>
-<tr> <td>2014-05-24</td> <td>\ref_rfc20140524</td> <td></td> </tr>
-<tr> <td>2014-03-18</td> <td>\ref_rfc20140318</td> <td></td> </tr>
-<tr> <td>2014-03-13</td> <td>\ref_rfc20140313</td> <td></td> </tr>
-<tr> <td>2014-02-24</td> <td>\ref_rfc20140224</td> <td></td> </tr>
-<tr> <td>2013-12-11</td> <td>\ref_rfc20131211</td> <td></td> </tr>
-<tr> <td>2013-09-30</td> <td>\ref_rfc20130930</td> <td></td> </tr>
-<tr> <td>2013-09-19</td> <td>\ref_rfc20130919</td> <td></td> </tr>
-<tr> <td>2013-06-30</td> <td>\ref_rfc20130630</td> <td></td> </tr>
-<tr> <td>2013-03-16</td> <td>\ref_rfc20130316</td> <td></td> </tr>
-<tr> <td>2012-11-14</td> <td>\ref_rfc20121114</td> <td></td> </tr>
-<tr> <td>2012-10-24</td> <td>\ref_rfc20121024</td> <td></td> </tr>
-<tr> <td>2012-08-28</td> <td>\ref_rfc20120828</td> <td></td> </tr>
-<tr> <td>2012-05-23</td> <td>\ref_rfc20120523</td> <td></td> </tr>
-<tr> <td>2012-05-01</td> <td>\ref_rfc20120501</td> <td></td> </tr>
-<tr> <td>2012-03-05</td> <td>\ref_rfc20120305</td> <td></td> </tr>
-<tr> <td>2012-02-20</td> <td>\ref_rfc20120220</td> <td></td> </tr>
-<tr> <td>2012-01-20</td> <td>\ref_rfc20120120</td> <td></td> </tr>
-<tr> <td>2012-01-04</td> <td>\ref_rfc20120104</td> <td></td> </tr>
-<tr> <td>2011-11-19</td> <td>\ref_rfc20111119</td> <td></td> </tr>
-<tr> <td>2011-08-25</td> <td>\ref_rfc20110825</td> <td></td> </tr>
-<tr> <td>2011-08-11</td> <td>\ref_rfc20110811</td> <td></td> </tr>
-<tr> <td>2011-07-26</td> <td>\ref_rfc20110726</td> <td></td> </tr>
-<tr> <td>2011-06-14</td> <td>\ref_rfc20110614</td> <td></td> </tr>
-<tr> <td>2011-03-29</td> <td>\ref_rfc20110329</td> <td></td> </tr>
-<tr> <td>2011-01-18</td> <td>\ref_rfc20110118</td> <td></td> </tr>
-<tr> <td>2010-11-22</td> <td>\ref_rfc20101122</td> <td></td> </tr>
-<tr> <td>2010-11-04</td> <td>\ref_rfc20101104</td> <td></td> </tr>
-<tr> <td>2010-10-18</td> <td>\ref_rfc20101018</td> <td></td> </tr>
-<tr> <td>2010-09-02</td> <td>\ref_rfc20100902</td> <td></td> </tr>
-<tr> <td>2010-07-27</td> <td>\ref_rfc20100727</td> <td></td> </tr>
-<tr> <td>2010-07-26</td> <td>\ref_rfc20100726</td> <td></td> </tr>
-<tr> <td>2010-05-11</td> <td>\ref_rfc20100511</td> <td></td> </tr>
-<tr> <td>2010-04-22</td> <td>\ref_rfc20100422</td> <td></td> </tr>
-<tr> <td>2010-03-12</td> <td>\ref_rfc20100312</td> <td></td> </tr>
-<tr> <td>2009-12-18</td> <td>\ref_rfc20091218</td> <td></td> </tr>
-<tr> <td>2009-09-07</td> <td>\ref_rfc20090907</td> <td></td> </tr>
-<tr> <td>2009-06-12</td> <td>\ref_rfc20090612</td> <td></td> </tr>
-<tr> <td>2008-12-18</td> <td>\ref_rfc20081218</td> <td></td> </tr>
-<tr> <td>2008-12-05</td> <td>\ref_rfc20081205</td> <td></td> </tr>
-<tr> <td>2008-10-30</td> <td>\ref_rfc20081030</td> <td></td> </tr>
-<tr> <td>2008-09-15</td> <td>\ref_rfc20080915</td> <td></td> </tr>
-<tr> <td>2008-09-04</td> <td>\ref_rfc20080904</td> <td></td> </tr>
-<tr> <td>2008-07-28</td> <td>\ref_rfc20080728</td> <td></td> </tr>
-<tr> <td>2008-07-23</td> <td>\ref_rfc20080723</td> <td></td> </tr>
-<tr> <td>2008-03-01</td> <td>\ref_rfc20080301</td> <td></td> </tr>
-<tr> <td>2008-02-09</td> <td>\ref_rfc20080209</td> <td></td> </tr>
-<tr> <td>2008-02-06</td> <td>\ref_rfc20080206</td> <td></td> </tr>
-<tr> <td>2007-11-11</td> <td>\ref_rfc20071111</td> <td></td> </tr>
-<tr> <td>2007-10-18</td> <td>\ref_rfc20071018</td> <td></td> </tr>
-<tr> <td>2007-08-01</td> <td>\ref_rfc20070801</td> <td></td> </tr>
-<tr> <td>2007-04-13</td> <td>\ref_rfc20070413</td> <td></td> </tr>
-<tr> <td>2007-01-15</td> <td>\ref_rfc20070115</td> <td></td> </tr>
-<tr> <td>2006-06-23</td> <td>\ref_rfc20060623</td> <td></td> </tr>
-<tr> <td>2006-06-04</td> <td>\ref_rfc20060604</td> <td></td> </tr>
-<tr> <td>2006-05-05</td> <td>\ref_rfc20060505</td> <td></td> </tr>
-<tr> <td>2006-04-10</td> <td>\ref_rfc20060410</td> <td></td> </tr>
-<tr> <td>2006-03-17</td> <td>\ref_rfc20060317</td> <td></td> </tr>
-<tr> <td>2006-01-24</td> <td>\ref_rfc20060124</td> <td></td> </tr>
-<tr> <td>2004-08-11</td> <td>\ref_rfc20040811</td> <td></td> </tr>
+<tr><th>RFC ID</th><th>Title</th></tr>
+<tr> <td>2022-08-19</td> <td>\ref_rfc20220819</td></tr>
+<tr> <td>2021-05-28</td> <td>\ref_rfc20210528</td></tr>
+<tr> <td>2021-02-19</td> <td>\ref_rfc20210219</td></tr>
+<tr> <td>2020-02-13</td> <td>\ref_rfc20200213</td></tr>
+<tr> <td>2020-02-10</td> <td>\ref_rfc20200210</td></tr>
+<tr> <td>2019-09-23</td> <td>\ref_rfc20190923</td></tr>
+<tr> <td>2019-07-15</td> <td>\ref_rfc20190715</td></tr>
+<tr> <td>2019-04-10</td> <td>\ref_rfc20190410</td></tr>
+<tr> <td>2018-12-31</td> <td>\ref_rfc20181231</td></tr>
+<tr> <td>2018-12-20</td> <td>\ref_rfc20181220</td></tr>
+<tr> <td>2018-08-30</td> <td>\ref_rfc20180830</td></tr>
+<tr> <td>2018-08-29</td> <td>\ref_rfc20180829</td></tr>
+<tr> <td>2018-08-15</td> <td>\ref_rfc20180815</td></tr>
+<tr> <td>2018-07-12</td> <td>\ref_rfc20180712</td></tr>
+<tr> <td>2018-06-20</td> <td>\ref_rfc20180620</td></tr>
+<tr> <td>2018-06-10</td> <td>\ref_rfc20180610</td></tr>
+<tr> <td>2018-03-21</td> <td>\ref_rfc20180321</td></tr>
+<tr> <td>2018-01-25</td> <td>\ref_rfc20180125</td></tr>
+<tr> <td>2017-07-07</td> <td>\ref_rfc20170707</td></tr>
+<tr> <td>2016-01-05</td> <td>\ref_rfc20160105</td></tr>
+<tr> <td>2015-09-15</td> <td>\ref_rfc20150915</td></tr>
+<tr> <td>2015-07-09</td> <td>\ref_rfc20150709</td></tr>
+<tr> <td>2015-06-15</td> <td>\ref_rfc20150615</td></tr>
+<tr> <td>2015-04-29</td> <td>\ref_rfc20150429</td></tr>
+<tr> <td>2015-04-24</td> <td>\ref_rfc20150424</td></tr>
+<tr> <td>2015-04-23</td> <td>\ref_rfc20150423</td></tr>
+<tr> <td>2015-03-01</td> <td>\ref_rfc20150301</td></tr>
+<tr> <td>2015-02-12</td> <td>\ref_rfc20150212</td></tr>
+<tr> <td>2015-02-05</td> <td>\ref_rfc20150205</td></tr>
+<tr> <td>2015-02-02</td> <td>\ref_rfc20150202</td></tr>
+<tr> <td>2014-12-10</td> <td>\ref_rfc20141210</td></tr>
+<tr> <td>2014-12-01</td> <td>\ref_rfc20141201</td></tr>
+<tr> <td>2014-09-16</td> <td>\ref_rfc20140916</td></tr>
+<tr> <td>2014-08-27</td> <td>\ref_rfc20140827</td></tr>
+<tr> <td>2014-07-29</td> <td>\ref_rfc20140729</td></tr>
+<tr> <td>2014-07-22</td> <td>\ref_rfc20140722</td></tr>
+<tr> <td>2014-07-17</td> <td>\ref_rfc20140717</td></tr>
+<tr> <td>2014-07-07</td> <td>\ref_rfc20140707</td></tr>
+<tr> <td>2014-05-24</td> <td>\ref_rfc20140524</td></tr>
+<tr> <td>2014-03-18</td> <td>\ref_rfc20140318</td></tr>
+<tr> <td>2014-03-13</td> <td>\ref_rfc20140313</td></tr>
+<tr> <td>2014-02-24</td> <td>\ref_rfc20140224</td></tr>
+<tr> <td>2013-12-11</td> <td>\ref_rfc20131211</td></tr>
+<tr> <td>2013-09-30</td> <td>\ref_rfc20130930</td></tr>
+<tr> <td>2013-09-19</td> <td>\ref_rfc20130919</td></tr>
+<tr> <td>2013-06-30</td> <td>\ref_rfc20130630</td></tr>
+<tr> <td>2013-03-16</td> <td>\ref_rfc20130316</td></tr>
+<tr> <td>2012-11-14</td> <td>\ref_rfc20121114</td></tr>
+<tr> <td>2012-10-24</td> <td>\ref_rfc20121024</td></tr>
+<tr> <td>2012-08-28</td> <td>\ref_rfc20120828</td></tr>
+<tr> <td>2012-05-23</td> <td>\ref_rfc20120523</td></tr>
+<tr> <td>2012-05-01</td> <td>\ref_rfc20120501</td></tr>
+<tr> <td>2012-03-05</td> <td>\ref_rfc20120305</td></tr>
+<tr> <td>2012-02-20</td> <td>\ref_rfc20120220</td></tr>
+<tr> <td>2012-01-20</td> <td>\ref_rfc20120120</td></tr>
+<tr> <td>2012-01-04</td> <td>\ref_rfc20120104</td></tr>
+<tr> <td>2011-11-19</td> <td>\ref_rfc20111119</td></tr>
+<tr> <td>2011-08-25</td> <td>\ref_rfc20110825</td></tr>
+<tr> <td>2011-08-11</td> <td>\ref_rfc20110811</td></tr>
+<tr> <td>2011-07-26</td> <td>\ref_rfc20110726</td></tr>
+<tr> <td>2011-06-14</td> <td>\ref_rfc20110614</td></tr>
+<tr> <td>2011-03-29</td> <td>\ref_rfc20110329</td></tr>
+<tr> <td>2011-01-18</td> <td>\ref_rfc20110118</td></tr>
+<tr> <td>2010-11-22</td> <td>\ref_rfc20101122</td></tr>
+<tr> <td>2010-11-04</td> <td>\ref_rfc20101104</td></tr>
+<tr> <td>2010-10-18</td> <td>\ref_rfc20101018</td></tr>
+<tr> <td>2010-09-02</td> <td>\ref_rfc20100902</td></tr>
+<tr> <td>2010-07-27</td> <td>\ref_rfc20100727</td></tr>
+<tr> <td>2010-07-26</td> <td>\ref_rfc20100726</td></tr>
+<tr> <td>2010-05-11</td> <td>\ref_rfc20100511</td></tr>
+<tr> <td>2010-04-22</td> <td>\ref_rfc20100422</td></tr>
+<tr> <td>2010-03-12</td> <td>\ref_rfc20100312</td></tr>
+<tr> <td>2009-12-18</td> <td>\ref_rfc20091218</td></tr>
+<tr> <td>2009-09-07</td> <td>\ref_rfc20090907</td></tr>
+<tr> <td>2009-06-12</td> <td>\ref_rfc20090612</td></tr>
+<tr> <td>2008-12-18</td> <td>\ref_rfc20081218</td></tr>
+<tr> <td>2008-12-05</td> <td>\ref_rfc20081205</td></tr>
+<tr> <td>2008-10-30</td> <td>\ref_rfc20081030</td></tr>
+<tr> <td>2008-09-15</td> <td>\ref_rfc20080915</td></tr>
+<tr> <td>2008-09-04</td> <td>\ref_rfc20080904</td></tr>
+<tr> <td>2008-07-28</td> <td>\ref_rfc20080728</td></tr>
+<tr> <td>2008-07-23</td> <td>\ref_rfc20080723</td></tr>
+<tr> <td>2008-03-01</td> <td>\ref_rfc20080301</td></tr>
+<tr> <td>2008-02-09</td> <td>\ref_rfc20080209</td></tr>
+<tr> <td>2008-02-06</td> <td>\ref_rfc20080206</td></tr>
+<tr> <td>2007-11-11</td> <td>\ref_rfc20071111</td></tr>
+<tr> <td>2007-10-18</td> <td>\ref_rfc20071018</td></tr>
+<tr> <td>2007-08-01</td> <td>\ref_rfc20070801</td></tr>
+<tr> <td>2007-04-13</td> <td>\ref_rfc20070413</td></tr>
+<tr> <td>2007-01-15</td> <td>\ref_rfc20070115</td></tr>
+<tr> <td>2006-06-23</td> <td>\ref_rfc20060623</td></tr>
+<tr> <td>2006-06-04</td> <td>\ref_rfc20060604</td></tr>
+<tr> <td>2006-05-05</td> <td>\ref_rfc20060505</td></tr>
+<tr> <td>2006-04-10</td> <td>\ref_rfc20060410</td></tr>
+<tr> <td>2006-03-17</td> <td>\ref_rfc20060317</td></tr>
+<tr> <td>2006-01-24</td> <td>\ref_rfc20060124</td></tr>
+<tr> <td>2004-08-11</td> <td>\ref_rfc20040811</td></tr>
</table>
*/
diff --git a/doxygen/dox/ReferenceManual.dox b/doxygen/dox/ReferenceManual.dox
index 7900925..e79de67 100644
--- a/doxygen/dox/ReferenceManual.dox
+++ b/doxygen/dox/ReferenceManual.dox
@@ -8,29 +8,140 @@ The functions provided by the HDF5 API are grouped into the following
<tr valign="top">
<td>
<table>
-<tr valign="top"><td style="border: none;">
-\include{doc} core_menu.md
+<caption>Core Reference Manual Modules</caption>
+<tr><th>Module</th><th colspan="4">Language</th><th>Description</th></tr>
+<tr>
+<th>Attributes (H5A)</th><td>@ref H5A "C"</td><td>@ref H5::Attribute "C++"</td><td>@ref FH5A "Fortran"</td><td>@ref JH5A "Java"</td><td>HDF5 attribute is a small metadata object describing the nature and/or intended usage of a primary data object.
+</td>
+</tr>
+<tr>
+<th>Datasets (H5D)</th><td>@ref H5D "C"</td><td>@ref H5::DataSet "C++"</td><td>@ref FH5D "Fortran"</td><td>@ref JH5D "Java"</td><td>Manage HDF5 datasets, including the transfer of data between memory and disk and the description of dataset properties.
+</td>
+</tr>
+<tr>
+<th>Dataspaces (H5S)</th><td>@ref H5S "C"</td><td>@ref H5::DataSpace "C++"</td><td>@ref FH5S "Fortran"</td><td>@ref JH5S "Java"</td><td>HDF5 dataspaces describe the shape of datasets in memory or in HDF5 files.
+</td>
+</tr>
+<tr>
+<th>Datatypes (H5T)</th><td>@ref H5T "C"</td><td>@ref H5::DataType "C++"</td><td>@ref FH5T "Fortran"</td><td>@ref JH5T "Java"</td><td>HDF5 datatypes describe the element type of HDF5 datasets and attributes.
+</td>
+</tr>
+<tr>
+<th>Error Handling (H5E)</th><td>@ref H5E "C"</td><td>@ref H5::Exception "C++"</td><td>@ref FH5E "Fortran"</td><td>@ref JH5E "Java"</td><td>HDF5 library error reporting.
+</td>
+</tr>
+<tr>
+<th>Event Set (H5ES)</th><td>@ref H5ES "C"</td><td>"C++"</td><td>"Fortran"</td><td>"Java"</td><td>HDF5 event set life cycle used with HDF5 VOL connectors that enable the asynchronous feature in HDF5.
+</td>
+</tr>
+<tr>
+<th>Files (H5F)</th><td>@ref H5F "C"</td><td>@ref H5::H5File "C++"</td><td>@ref FH5F "Fortran"</td><td>@ref JH5F "Java"</td><td>Manage HDF5 files.
+</td>
+</tr>
+<tr>
+<th>Filters (H5Z)</th><td>@ref H5Z "C"</td><td>"C++"</td><td>@ref FH5Z "Fortran"</td><td>@ref JH5Z "Java"</td><td>Manage HDF5 user-defined filters
+</td>
+</tr>
+<tr>
+<th>Groups (H5G)</th><td>@ref H5G "C"</td><td>@ref H5::Group "C++"</td><td>@ref FH5G "Fortran"</td><td>@ref JH5G "Java"</td><td>Manage HDF5 groups.
+</td>
+</tr>
+<tr>
+<th>Identifiers (H5I)</th><td>@ref H5I "C"</td><td>@ref H5::IdComponent "C++"</td><td>@ref FH5I "Fortran"</td><td>@ref JH5I "Java"</td><td>Manage identifiers defined by the HDF5 library.
+</td>
+</tr>
+<tr>
+<th>Library General (%H5)</th><td>@ref H5 "C"</td><td>@ref H5::H5Library "C++"</td><td>@ref FH5 "Fortran"</td><td>@ref JH5 "Java"</td><td>Manage the life cycle of HDF5 library instances.
+</td>
+</tr>
+<tr>
+<th>Links (H5L)</th><td>@ref H5L "C"</td><td>"C++"</td><td>@ref FH5L "Fortran"</td><td>@ref JH5L "Java"</td><td>Manage HDF5 links and link types.
+</td>
+</tr>
+<tr>
+<th>Objects (H5O)</th><td>@ref H5O "C"</td><td>"C++"</td><td>@ref FH5O "Fortran"</td><td>@ref JH5O "Java"</td><td>Manage HDF5 objects (groups, datasets, datatype objects).
+</td>
+</tr>
+<tr>
+<th>Property Lists (H5P)</th><td>@ref H5P "C"</td><td>@ref H5::PropList "C++"</td><td>@ref FH5P "Fortran"</td><td>@ref JH5P "Java"</td><td>HDF5 property lists are the main vehicle to configure the behavior of HDF5 API functions.
+</td>
+</tr>
+<tr>
+<th>Dynamically-loaded Plugins (H5PL)</th><td>@ref H5PL "C"</td><td>"C++"</td><td>"Fortran"</td><td>@ref JH5PL "Java"</td><td>Manage the loading behavior of HDF5 plugins.
+</td>
+</tr>
+<tr>
+<th>References (H5R)</th><td>@ref H5R "C"</td><td>"C++"</td><td>@ref FH5R "Fortran"</td><td>@ref JH5R "Java"</td><td>Manage HDF5 references (HDF5 objects, attributes, and selections on datasets a.k.a. dataset regions).
+</td>
+</tr>
+<tr>
+<th>VOL Connector (H5VL)</th><td>@ref H5VL "C"</td><td>"C++"</td><td>@ref FH5VL "Fortran"</td><td>@ref JH5VL "Java"</td><td>Manage HDF5 VOL connector plugins.
+</td>
+</tr>
+</table>
+<table>
+<caption>High-level Reference Manual Modules</caption>
+<tr><th>Module</th><th colspan="4"></th>Language<th>Description</th></tr>
+<tr>
+<th>HDF5 Lite APIs (H5LT,H5LD)</th><td>@ref H5LT "C"</td><td>"C++"</td><td>@ref FH5LT "Fortran"</td><td>"Java"</td><td>Functions to simplify creating and manipulating datasets, attributes and other features.
+</td>
+</tr>
+<tr>
+<th>HDF5 Images API (H5IM)</th><td>@ref H5IM "C"</td><td>"C++"</td><td>@ref FH5IM "Fortran"</td><td>"Java"</td><td>Creating and manipulating HDF5 datasets intended to be interpreted as images.
+</td>
+</tr>
+<tr>
+<th>HDF5 Table APIs (H5TB)</th><td>@ref H5TB "C"</td><td>"C++"</td><td>@ref FH5TB "Fortran"</td><td>"Java"</td><td>Creating and manipulating HDF5 datasets intended to be interpreted as tables.
+</td>
+</tr>
+<tr>
+<th>HDF5 Packet Table APIs (H5PT)</th><td>@ref H5PT "C"</td><td>"C++"</td><td>"Fortran"</td><td>"Java"</td><td>Creating and manipulating HDF5 datasets to support append- and read-only operations on table data.
+</td>
+</tr>
+<tr>
+<th>HDF5 Dimension Scales APIs (H5DS)</th><td>@ref H5DS "C"</td><td>"C++"</td><td>@ref FH5DS "Fortran"</td><td>"Java"</td><td>Creating and manipulating HDF5 datasets that are associated with the dimension of another HDF5 dataset.
</td>
</tr>
-<tr valign="top"><td style="border: none;">
-<!-- High-level library -->
-\include{doc} high_level_menu.md
+<tr>
+<th>HDF5 Optimizations APIs (H5DO)</th><td>@ref H5DO "C"</td><td>"C++"</td><td>"Fortran"</td><td>"Java"</td><td>Bypassing default HDF5 behavior in order to optimize for specific use cases.
+</td>
+</tr>
+<tr>
+<th>Extensions (H5LR, H5LT)</th><td>@ref H5LR "C"</td><td>"C++"</td><td>"Fortran"</td><td>"Java"</td><td>
+</td>
+</tr>
+</table>
+</td>
+</tr>
+<tr><td>
+<table>
+<caption>Additional Java Reference Manual Modules</caption>
+<tr>
+<td>@ref HDF5CONST</td><td>This class contains C constants and enumerated types of HDF5 library.
</td>
</tr>
-<tr valign="top"><td style="border: none;">
-<!-- Fortran library -->
-\include{doc} fortran_menu.md
+<tr>
+<td>@ref HDFNATIVE</td><td>This class encapsulates native methods to deal with arrays of numbers, converting from numbers to bytes and bytes to numbers.
</td>
</tr>
-<tr valign="top"><td style="border: none;">
-<!-- Java library -->
-\include{doc} java_menu.md
+<tr>
+<td>@ref HDFARRAY</td><td>This is a class for handling multidimensional arrays for HDF.
</td>
</tr>
<tr>
-<td><a href="./deprecated.html">Deprecated functions</a></td>
-<td>Functions with \ref ASYNC</td>
-<td>\ref api-compat-macros</td>
+<td>@ref ERRORS</td><td>The class HDF5Exception returns errors from the Java HDF5 Interface.
+</td>
+</tr>
+</table>
+</td>
+</tr>
+<tr>
+<td>
+\ref predefined_datatypes_tables<br />
+<a href="./deprecated.html">Deprecated functions</a><br />
+Functions with \ref ASYNC<br />
+\ref api-compat-macros
+</td>
</tr>
</table>
diff --git a/doxygen/examples/core_menu.md b/doxygen/examples/menus/core_menu.md
index 3fd7d11..3fd7d11 100644
--- a/doxygen/examples/core_menu.md
+++ b/doxygen/examples/menus/core_menu.md
diff --git a/doxygen/examples/fortran_menu.md b/doxygen/examples/menus/fortran_menu.md
index 8ef4ead..8ef4ead 100644
--- a/doxygen/examples/fortran_menu.md
+++ b/doxygen/examples/menus/fortran_menu.md
diff --git a/doxygen/examples/high_level_menu.md b/doxygen/examples/menus/high_level_menu.md
index d209bf4..d209bf4 100644
--- a/doxygen/examples/high_level_menu.md
+++ b/doxygen/examples/menus/high_level_menu.md
diff --git a/doxygen/examples/java_menu.md b/doxygen/examples/menus/java_menu.md
index 1236838..1236838 100644
--- a/doxygen/examples/java_menu.md
+++ b/doxygen/examples/menus/java_menu.md
diff --git a/doxygen/examples/tables/predefinedDatatypes.dox b/doxygen/examples/tables/predefinedDatatypes.dox
new file mode 100644
index 0000000..2427d0c
--- /dev/null
+++ b/doxygen/examples/tables/predefinedDatatypes.dox
@@ -0,0 +1,629 @@
+/** Predefined Datatypes List
+ *
+//! [predefined_ieee_datatypes_table]
+<table>
+<caption>Predefined IEEE Floating Point Datatypes</caption>
+<tr>
+<th>Datatype</th>
+<th>Description</th>
+</tr>
+<tr>
+<td>#H5T_IEEE_F32BE</td>
+<td>32-bit big-endian IEEE floating point</td>
+</tr>
+<tr>
+<td>#H5T_IEEE_F32LE</td>
+<td>32-bit little-endian IEEE floating point</td>
+</tr>
+<tr>
+<td>#H5T_IEEE_F64BE</td>
+<td>64-bit big-endian IEEE floating point</td>
+</tr>
+<tr>
+<td>#H5T_IEEE_F64LE</td>
+<td>64-bit little-endian IEEE floating point</td>
+</tr>
+</table>
+//! [predefined_ieee_datatypes_table]
+ *
+ *
+//! [predefined_std_datatypes_table]
+<table>
+<caption>Predefined Standard Datatypes</caption>
+<tr>
+<th>Datatype</th>
+<th>Description</th>
+</tr>
+<tr>
+<td>#H5T_STD_I8BE</td>
+<td>8-bit big-endian signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_STD_I8LE</td>
+<td>8-bit little-endian signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_STD_I16BE</td>
+<td>16-bit big-endian signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_STD_I16LE</td>
+<td>16-bit little-endian signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_STD_I32BE</td>
+<td>32-bit big-endian signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_STD_I32LE</td>
+<td>32-bit little-endian signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_STD_I64BE</td>
+<td>64-bit big-endian signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_STD_I64LE</td>
+<td>64-bit little-endian signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_STD_U8BE</td>
+<td>8-bit big-endian unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_STD_U8LE</td>
+<td>8-bit little-endian unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_STD_U16BE</td>
+<td>16-bit big-endian unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_STD_U16LE</td>
+<td>16-bit little-endian unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_STD_U32BE</td>
+<td>32-bit big-endian unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_STD_U32LE</td>
+<td>32-bit little-endian unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_STD_U64BE</td>
+<td>64-bit big-endian unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_STD_U64LE</td>
+<td>64-bit little-endian unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_STD_B8BE</td>
+<td>8-bit big-endian bitfield</td>
+</tr>
+<tr>
+<td>#H5T_STD_B8LE</td>
+<td>8-bit little-endian bitfield</td>
+</tr>
+<tr>
+<td>#H5T_STD_B16BE</td>
+<td>16-bit big-endian bitfield</td>
+</tr>
+<tr>
+<td>#H5T_STD_B16LE</td>
+<td>16-bit little-endian bitfield</td>
+</tr>
+<tr>
+<td>#H5T_STD_B32BE</td>
+<td>32-bit big-endian bitfield</td>
+</tr>
+<tr>
+<td>#H5T_STD_B32LE</td>
+<td>32-bit little-endian bitfield</td>
+</tr>
+<tr>
+<td>#H5T_STD_B64BE</td>
+<td>64-bit big-endian bitfield</td>
+</tr>
+<tr>
+<td>#H5T_STD_B64LE</td>
+<td>64-bit little-endian bitfield</td>
+</tr>
+<tr>
+<td>#H5T_STD_REF_OBJ</td>
+<td>Object reference</td>
+</tr>
+<tr>
+<td>#H5T_STD_REF_DSETREG</td>
+<td>Dataset region reference</td>
+</tr>
+<tr>
+<td>#H5T_STD_REF</td>
+<td>Generic reference</td>
+</tr>
+</table>
+//! [predefined_std_datatypes_table]
+ *
+ *
+//! [predefined_unix_datatypes_table]
+<table>
+<caption>Predefined UNIX-specific Datatypes</caption>
+<tr>
+<th>Datatype</th>
+<th>Description</th>
+</tr>
+<tr>
+<td>#H5T_UNIX_D32BE</td>
+<td>32-bit big-endian</td>
+</tr>
+<tr>
+<td>#H5T_UNIX_D32LE</td>
+<td>32-bit little-endian</td>
+</tr>
+<tr>
+<td>#H5T_UNIX_D64BE</td>
+<td>64-bit big-endian</td>
+</tr>
+<tr>
+<td>#H5T_UNIX_D64LE</td>
+<td>64-bit little-endian</td>
+</tr>
+</table>
+//! [predefined_unix_datatypes_table]
+ *
+ *
+//! [predefined_string_datatypes_table]
+<table>
+<caption>Predefined String Datatypes</caption>
+<tr>
+<th>Datatype</th>
+<th>Description</th>
+</tr>
+<tr>
+<td>#H5T_C_S1</td>
+<td>String datatype in C (size defined in bytes rather than in bits)</td>
+</tr>
+</tr>
+<tr>
+<td>#H5T_FORTRAN_S1</td>
+<td>String datatype in Fortran (as defined for the HDF5 C library)</td>
+</tr>
+</table>
+//! [predefined_string_datatypes_table]
+ *
+ *
+//! [predefined_intel_datatypes_table]
+<table>
+<caption>Predefined Intel-specific Datatypes</caption>
+<tr>
+<th>Datatype</th>
+<th>Description</th>
+</tr>
+<tr>
+<td>#H5T_INTEL_I8</td>
+<td>8-bit little-endian signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_INTEL_I16</td>
+<td>16-bit little-endian signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_INTEL_I32</td>
+<td>32-bit little-endian signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_INTEL_I64</td>
+<td>64-bit little-endian signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_INTEL_U8</td>
+<td>8-bit little-endian unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_INTEL_U16</td>
+<td>16-bit little-endian unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_INTEL_U32</td>
+<td>32-bit little-endian unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_INTEL_U64</td>
+<td>64-bit little-endian unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_INTEL_B8</td>
+<td>8-bit little-endian bitfield</td>
+</tr>
+<tr>
+<td>#H5T_INTEL_B16</td>
+<td>16-bit little-endian bitfield</td>
+</tr>
+<tr>
+<td>#H5T_INTEL_B32</td>
+<td>32-bit little-endian bitfield</td>
+</tr>
+<tr>
+<td>#H5T_INTEL_B64</td>
+<td>64-bit little-endian bitfield</td>
+</tr>
+<tr>
+<td>#H5T_INTEL_F32</td>
+<td>32-bit little-endian IEEE floating point</td>
+</tr>
+<tr>
+<td>#H5T_INTEL_F64</td>
+<td>64-bit little-endian IEEE floating point</td>
+</tr>
+</table>
+//! [predefined_intel_datatypes_table]
+ *
+ *
+//! [predefined_dec_datatypes_table]
+<table>
+<caption>Predefined DEC Alpha-specific Datatypes</caption>
+<tr>
+<th>Datatype</th>
+<th>Description</th>
+</tr>
+<tr>
+<td>#H5T_ALPHA_I8</td>
+<td>8-bit little-endian signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_ALPHA_I16</td>
+<td>16-bit little-endian signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_ALPHA_I32</td>
+<td>32-bit little-endian signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_ALPHA_I64</td>
+<td>64-bit little-endian signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_ALPHA_U8</td>
+<td>8-bit little-endian unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_ALPHA_U16</td>
+<td>16-bit little-endian unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_ALPHA_U32</td>
+<td>32-bit little-endian unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_ALPHA_U64</td>
+<td>64-bit little-endian unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_ALPHA_B8</td>
+<td>8-bit little-endian bitfield</td>
+</tr>
+<tr>
+<td>#H5T_ALPHA_B16</td>
+<td>16-bit little-endian bitfield</td>
+</tr>
+<tr>
+<td>#H5T_ALPHA_B32</td>
+<td>32-bit little-endian bitfield</td>
+</tr>
+<tr>
+<td>#H5T_ALPHA_B64</td>
+<td>64-bit little-endian bitfield</td>
+</tr>
+<tr>
+<td>#H5T_ALPHA_F32</td>
+<td>32-bit little-endian IEEE floating point</td>
+</tr>
+<tr>
+<td>#H5T_ALPHA_F64</td>
+<td>64-bit little-endian IEEE floating point</td>
+</tr>
+</table>
+//! [predefined_dec_datatypes_table]
+ *
+ *
+//! [predefined_openvms_datatypes_table]
+<table>
+<caption>Predefined OpenVMS DEC Alpha-specific Datatypes</caption>
+<tr>
+<th>Datatype</th>
+<th>Description</th>
+</tr>
+<tr>
+<td>#H5T_VAX_F32</td>
+<td>32-bit floating point (Corresponds to F_Floating type)</td>
+</tr>
+<tr>
+<td>#H5T_VAX_F64</td>
+<td>64-bit floating point (Corresponds to G_Floating type)</td>
+</tr>
+</table>
+//! [predefined_openvms_datatypes_table]
+ *
+ *
+//! [predefined_mips_datatypes_table]
+<table>
+<caption>Predefined MIPS-specific Datatypes</caption>
+<tr>
+<th>Datatype</th>
+<th>Description</th>
+</tr>
+<tr>
+<td>#H5T_MIPS_I8</td>
+<td>8-bit big-endian signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_MIPS_I16</td>
+<td>16-bit big-endian signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_MIPS_I32</td>
+<td>32-bit big-endian signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_MIPS_I64</td>
+<td>64-bit big-endian signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_MIPS_U8</td>
+<td>8-bit big-endian unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_MIPS_U16</td>
+<td>16-bit big-endian unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_MIPS_U32</td>
+<td>32-bit big-endian unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_MIPS_U64</td>
+<td>64-bit big-endian unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_MIPS_B8</td>
+<td>8-bit big-endian bitfield</td>
+</tr>
+<tr>
+<td>#H5T_MIPS_B16</td>
+<td>16-bit big-endian bitfield</td>
+</tr>
+<tr>
+<td>#H5T_MIPS_B32</td>
+<td>32-bit big-endian bitfield</td>
+</tr>
+<tr>
+<td>#H5T_MIPS_B64</td>
+<td>64-bit big-endian bitfield</td>
+</tr>
+<tr>
+<td>#H5T_MIPS_F32</td>
+<td>32-bit big-endian IEEE floating point</td>
+</tr>
+<tr>
+<td>#H5T_MIPS_F64</td>
+<td>64-bit big-endian IEEE floating point</td>
+</tr>
+</table>
+//! [predefined_mips_datatypes_table]
+ *
+ *
+//! [predefined_native_datatypes_table]
+<table>
+<caption>Predefined Native Datatypes</caption>
+<tr>
+<th>Datatype</th>
+<th>Description</th>
+</tr>
+<tr>
+<td>#H5T_NATIVE_CHAR</td>
+<td>C-style char</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_SCHAR</td>
+<td>C-style signed char</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_UCHAR</td>
+<td>C-style unsigned signed char</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_SHORT</td>
+<td>C-style short</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_USHORT</td>
+<td>C-style unsigned short</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_INT</td>
+<td>C-style int</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_UINT</td>
+<td>C-style unsigned int</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_LONG</td>
+<td>C-style long</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_ULONG</td>
+<td>C-style unsigned long</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_LLONG</td>
+<td>C-style long long</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_ULLONG</td>
+<td>C-style unsigned long long</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_FLOAT</td>
+<td>C-style float</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_DOUBLE</td>
+<td>C-style double</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_LDOUBLE</td>
+<td>C-style long double</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_B8</td>
+<td>8-bit bitfield based on native types</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_B16</td>
+<td>16-bit bitfield based on native types</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_B32</td>
+<td>32-bit bitfield based on native types</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_B64</td>
+<td>64-bit bitfield based on native types</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_OPAQUE</td>
+<td>opaque unit based on native types</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_HADDR</td>
+<td>address type based on native types</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_HSIZE</td>
+<td>size type based on native types</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_HSSIZE</td>
+<td>signed size type based on native types</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_HERR</td>
+<td>error code type based on native types</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_HBOOL</td>
+<td>Boolean type based on native types</td>
+</tr>
+</table>
+//! [predefined_native_datatypes_table]
+ *
+ *
+//! [predefined_c9x_datatypes_table]
+<table>
+<caption>Predefined ANSI C9x-specific Native Integer Datatypes</caption>
+<tr>
+<th>Datatype</th>
+<th>Description</th>
+</tr>
+<tr>
+<td>#H5T_NATIVE_INT8</td>
+<td>8-bit signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_UINT8</td>
+<td>8-bit unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_INT_LEAST8</td>
+<td>8-bit signed integer (2's complement) with storage to use least amount of space</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_UINT_LEAST8</td>
+<td>8-bit unsigned integer with storage to use least amount of space</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_INT_FAST8</td>
+<td>8-bit signed integer (2's complement) with storage to maximize performance</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_UINT_FAST8</td>
+<td>8-bit unsigned integer with storage to maximize performance</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_INT16</td>
+<td>16-bit signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_UINT16</td>
+<td>16-bit unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_INT_LEAST16</td>
+<td>16-bit signed integer (2's complement) with storage to use least amount of space</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_UINT_LEAST16</td>
+<td>16-bit unsigned integer with storage to use least amount of space</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_INT_FAST16</td>
+<td>16-bit signed integer (2's complement) with storage to maximize performance</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_UINT_FAST16</td>
+<td>16-bit unsigned integer with storage to maximize performance</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_INT32</td>
+<td>32-bit signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_UINT32</td>
+<td>32-bit unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_INT_LEAST32</td>
+<td>32-bit signed integer (2's complement) with storage to use least amount of space</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_UINT_LEAST32</td>
+<td>32-bit unsigned integer with storage to use least amount of space</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_INT_FAST32</td>
+<td>32-bit signed integer (2's complement) with storage to maximize performance</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_UINT_FAST32</td>
+<td>32-bit unsigned integer with storage to maximize performance</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_INT64</td>
+<td>64-bit signed integer (2's complement)</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_UINT64</td>
+<td>64-bit unsigned integer</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_INT_LEAST64</td>
+<td>64-bit signed integer (2's complement) with storage to use least amount of space</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_UINT_LEAST64</td>
+<td>64-bit unsigned integer with storage to use least amount of space</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_INT_FAST64</td>
+<td>64-bit signed integer (2's complement) with storage to maximize performance</td>
+</tr>
+<tr>
+<td>#H5T_NATIVE_UINT_FAST64</td>
+<td>64-bit unsigned integer with storage to maximize performance</td>
+</tr>
+</table>
+//! [predefined_c9x_datatypes_table]
+ *
+ */
diff --git a/doxygen/hdf5doxy_layout.xml b/doxygen/hdf5doxy_layout.xml
index f7c47bf..588052b 100644
--- a/doxygen/hdf5doxy_layout.xml
+++ b/doxygen/hdf5doxy_layout.xml
@@ -6,7 +6,6 @@
<tab type="user" url="@ref GettingStarted" title="Getting started" />
<tab type="user" url="@ref Cookbook" title="Cookbook" />
<tab type="user" url="@ref UG" title="User Guide" />
- <tab type="user" url="https://portal.hdfgroup.org/display/HDF5/HDF5+User+Guides" title="User Guides" />
<tab type="user" url="https://portal.hdfgroup.org/display/HDF5/HDF5+Application+Developer%27s+Guide" title="Application Developer's Guide" />
<tab type="user" url="@ref GLS" title="Glossary" />
<tab type="user" url="@ref RM" title="Reference Manual" />
diff --git a/src/H5Tmodule.h b/src/H5Tmodule.h
index f631007..bc521f1 100644
--- a/src/H5Tmodule.h
+++ b/src/H5Tmodule.h
@@ -3871,26 +3871,6 @@ filled according to the value of this property. The padding can be:
* to HDF5 files and linked to groups as HDF5 datatype objects or so-called
* \Emph{committed datatypes}.
*
- * <table>
- * <tr><th>Create</th><th>Read</th></tr>
- * <tr valign="top">
- * <td>
- * \snippet{lineno} H5T_examples.c create
- * </td>
- * <td>
- * \snippet{lineno} H5T_examples.c read
- * </td>
- * <tr><th>Update</th><th>Delete</th></tr>
- * <tr valign="top">
- * <td>
- * \snippet{lineno} H5T_examples.c update
- * </td>
- * <td>
- * \snippet{lineno} H5T_examples.c delete
- * </td>
- * </tr>
- * </table>
- *
* \defgroup ARRAY Array Datatypes
* \ingroup H5T
* \defgroup ATOM Atomic Datatypes
@@ -3911,33 +3891,36 @@ filled according to the value of this property. The padding can be:
*
* \defgroup PDT Predefined Datatypes
* \ingroup H5T
- * \details What is a predefined HDF5 datatype?
- * \todo Fill in the blanks!
*
* \defgroup PDTCPU By CPU
* \ingroup PDT
* \details CPU-specific datatypes
* \defgroup PDTALPHA DEC Alpha
* \ingroup PDTCPU
+ * \snippet{doc} tables/predefinedDatatypes.dox predefined_dec_datatypes_table
* \defgroup PDTX86 AMD & INTEL
* \ingroup PDTCPU
+ * \snippet{doc} tables/predefinedDatatypes.dox predefined_intel_datatypes_table
* \defgroup PDTMIPS SGI MIPS
* \ingroup PDTCPU
+ * \snippet{doc} tables/predefinedDatatypes.dox predefined_mips_datatypes_table
*
* \defgroup PDTIEEE IEEE
* \ingroup PDT
* \details The IEEE floating point types in big- and little-endian byte orders.
+ * \snippet{doc} tables/predefinedDatatypes.dox predefined_ieee_datatypes_table
*
* \defgroup PDTSTD Standard Datatypes
* \ingroup PDT
* \details These are "standard" types. For instance, signed (2's complement)
* and unsigned integers of various sizes in big- and little-endian
* byte orders.
+ * \snippet{doc} tables/predefinedDatatypes.dox predefined_std_datatypes_table
*
* \defgroup PDTUNIX UNIX-specific Datatypes
* \ingroup PDT
* \details Types which are particular to Unix.
- * \todo Fill in the blanks!
+ * \snippet{doc} tables/predefinedDatatypes.dox predefined_unix_datatypes_table
*
* \defgroup PDTNAT Native Datatypes
* \ingroup PDT
@@ -3951,13 +3934,16 @@ filled according to the value of this property. The padding can be:
* \li The datatype \c LLONG corresponds C's \Code{long long} and
* \c LDOUBLE is \Code{long double}. These types might be the same
* as \c LONG and \c DOUBLE, respectively.
+ * \snippet{doc} tables/predefinedDatatypes.dox predefined_native_datatypes_table
+ *
* \defgroup PDTC9x C9x Integer Datatypes
* \ingroup PDTNAT
* \details C9x integer types
- * \todo Fill in the blanks!
+ * \snippet{doc} tables/predefinedDatatypes.dox predefined_c9x_datatypes_table
*
* \defgroup PDTS Strings
* \ingroup PDT
+ * \snippet{doc} tables/predefinedDatatypes.dox predefined_string_datatypes_table
*
*/
generated by cgit v0.12 at 2024-07-15 18:39:06 (GMT)