diff options
| -rw-r--r-- | README.md | 2 | ||||
| -rw-r--r-- | c++/src/cpp_doc_config | 2 | ||||
| -rw-r--r-- | config/cmake/scripts/HDF5config.cmake | 2 | ||||
| -rw-r--r-- | configure.ac | 2 | ||||
| -rw-r--r-- | java/src/hdf/hdf5lib/H5.java | 4 | ||||
| -rw-r--r-- | java/test/TestH5.java | 4 | ||||
| -rw-r--r-- | release_docs/HISTORY-1_14.txt | 735 | ||||
| -rw-r--r-- | release_docs/README_HPC | 26 | ||||
| -rw-r--r-- | release_docs/RELEASE.txt | 376 | ||||
| -rw-r--r-- | src/H5public.h | 4 | ||||
| -rw-r--r-- | tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_version_test.ddl | 14 |
11 files changed, 773 insertions, 398 deletions
@@ -1,4 +1,4 @@ -HDF5 version 1.14.1-1 currently under development +HDF5 version 1.14.2-1 currently under development  diff --git a/c++/src/cpp_doc_config b/c++/src/cpp_doc_config index 0d08858..4b99cdd 100644 --- a/c++/src/cpp_doc_config +++ b/c++/src/cpp_doc_config @@ -38,7 +38,7 @@ PROJECT_NAME = # could be handy for archiving the generated documentation or if some version # control system is used. -PROJECT_NUMBER = "1.14.1-1, currently under development" +PROJECT_NUMBER = "1.14.2-1, currently under development" # Using the PROJECT_BRIEF tag one can provide an optional one line description # for a project that appears at the top of each page and should give viewer a diff --git a/config/cmake/scripts/HDF5config.cmake b/config/cmake/scripts/HDF5config.cmake index 708e45f..30d187e 100644 --- a/config/cmake/scripts/HDF5config.cmake +++ b/config/cmake/scripts/HDF5config.cmake @@ -37,7 +37,7 @@ cmake_minimum_required (VERSION 3.18) # CTEST_SOURCE_NAME - source folder ############################################################################## -set (CTEST_SOURCE_VERSION "1.14.1") +set (CTEST_SOURCE_VERSION "1.14.2") set (CTEST_SOURCE_VERSEXT "-1") ############################################################################## diff --git a/configure.ac b/configure.ac index c94f2b9..f9349ee 100644 --- a/configure.ac +++ b/configure.ac @@ -22,7 +22,7 @@ AC_PREREQ([2.69]) ## NOTE: Do not forget to change the version number here when we do a ## release!!! ## -AC_INIT([HDF5], [1.14.1-1], [help@hdfgroup.org]) +AC_INIT([HDF5], [1.14.2-1], [help@hdfgroup.org]) AC_CONFIG_SRCDIR([src/H5.c]) AC_CONFIG_HEADERS([src/H5config.h]) diff --git a/java/src/hdf/hdf5lib/H5.java b/java/src/hdf/hdf5lib/H5.java index 274dd5c..045ce67 100644 --- a/java/src/hdf/hdf5lib/H5.java +++ b/java/src/hdf/hdf5lib/H5.java @@ -231,7 +231,7 @@ import org.slf4j.LoggerFactory; * which prints out the HDF5 error stack, as described in the HDF5 C API <i><b>@ref H5Eprint()</b>.</i> This * may be used by Java exception handlers to print out the HDF5 error stack. <hr> * - * @version HDF5 1.14.1 <BR> + * @version HDF5 1.14.2 <BR> * <b>See also: </b> * @ref HDFARRAY hdf.hdf5lib.HDFArray<br /> * @ref HDF5CONST hdf.hdf5lib.HDF5Constants<br /> @@ -273,7 +273,7 @@ public class H5 implements java.io.Serializable { * </ul> * Make sure to update the versions number when a different library is used. */ - public final static int LIB_VERSION[] = {1, 14, 1}; + public final static int LIB_VERSION[] = {1, 14, 2}; /** * @ingroup JH5 diff --git a/java/test/TestH5.java b/java/test/TestH5.java index 7333ad0..864a329 100644 --- a/java/test/TestH5.java +++ b/java/test/TestH5.java @@ -313,7 +313,7 @@ public class TestH5 { @Test public void testH5get_libversion() { - int libversion[] = {1, 14, 1}; + int libversion[] = {1, 14, 2}; try { H5.H5get_libversion(libversion); @@ -354,7 +354,7 @@ public class TestH5 { @Test public void testH5check_version() { - int majnum = 1, minnum = 14, relnum = 1; + int majnum = 1, minnum = 14, relnum = 2; try { H5.H5check_version(majnum, minnum, relnum); diff --git a/release_docs/HISTORY-1_14.txt b/release_docs/HISTORY-1_14.txt index f012f47..0c8d51d 100644 --- a/release_docs/HISTORY-1_14.txt +++ b/release_docs/HISTORY-1_14.txt @@ -3,10 +3,745 @@ HDF5 History This file contains development history of the HDF5 1.14 branch +02. Release Information for hdf5-1.14.1 01. Release Information for hdf5-1.14.0 [Search on the string '%%%%' for section breaks of each release.] +%%%%1.14.1%%%% + +HDF5 version 1.14.1-2 released on 2023-05-11 +================================================================================ +HDF5 1.14.1-2 is a patch release for HDF5 1.14.1. The only change in the patch +release is that Autoconf 2.71 was used to generate the Autotools build files, +which allows building with Intel's oneAPI. + + +INTRODUCTION +============ + +This document describes the differences between this release and the previous +HDF5 release. It contains information on the platforms tested and known +problems in this release. For more details check the HISTORY*.txt files in the +HDF5 source. + +Note that documentation in the links below will be updated at the time of each +final release. + +Links to HDF5 documentation can be found on The HDF5 web page: + + https://portal.hdfgroup.org/display/HDF5/HDF5 + +The official HDF5 releases can be obtained from: + + https://www.hdfgroup.org/downloads/hdf5/ + +Changes from release to release and new features in the HDF5-1.14.x release series +can be found at: + + https://portal.hdfgroup.org/display/HDF5/Release+Specific+Information + +If you have any questions or comments, please send them to the HDF Help Desk: + + help@hdfgroup.org + + +CONTENTS +======== + +- New Features +- Support for new platforms and languages +- Bug Fixes since HDF5-1.14.0 +- Platforms Tested +- Known Problems +- CMake vs. Autotools installations + + +New Features +============ + + Configuration: + ------------- + - Added new CMake options for building and running HDF5 API tests + (Experimental) + + HDF5 API tests are an experimental feature, primarily targeted + toward HDF5 VOL connector authors, that is currently being developed. + These tests exercise the HDF5 API and are being integrated back + into the HDF5 library from the HDF5 VOL tests repository + (https://github.com/HDFGroup/vol-tests). To support this feature, + the following new options have been added to CMake: + + * HDF5_TEST_API: ON/OFF (Default: OFF) + + Controls whether the HDF5 API tests will be built. These tests + will only be run during testing of HDF5 if the HDF5_TEST_SERIAL + (for serial tests) and HDF5_TEST_PARALLEL (for parallel tests) + options are enabled. + + * HDF5_TEST_API_INSTALL: ON/OFF (Default: OFF) + + Controls whether the HDF5 API test executables will be installed + on the system alongside the HDF5 library. This option is currently + not functional. + + * HDF5_TEST_API_ENABLE_ASYNC: ON/OFF (Default: OFF) + + Controls whether the HDF5 Async API tests will be built. These + tests will only be run if the VOL connector used supports Async + operations. + + * HDF5_TEST_API_ENABLE_DRIVER: ON/OFF (Default: OFF) + + Controls whether to build the HDF5 API test driver program. This + test driver program is useful for VOL connectors that use a + client/server model where the server needs to be up and running + before the VOL connector can function. This option is currently + not functional. + + * HDF5_TEST_API_SERVER: String (Default: "") + + Used to specify a path to the server executable that the test + driver program should execute. + + - Added support for CMake presets file. + + CMake supports two main files, CMakePresets.json and CMakeUserPresets.json, + that allow users to specify common configure options and share them with others. + HDF added a CMakePresets.json file of a typical configuration and support + file, config/cmake-presets/hidden-presets.json. + Also added a section to INSTALL_CMake.txt with very basic explanation of the + process to use CMakePresets. + + - Deprecated and removed old SZIP library in favor of LIBAEC library + + LIBAEC library has been used in HDF5 binaries as the szip library of choice + for a few years. We are removing the options for using the old SZIP library. + + Also removed the config/cmake/FindSZIP.cmake file. + + - Enabled instrumentation of the library by default in CMake for parallel + debug builds + + HDF5 can be configured to instrument portions of the parallel library to + aid in debugging. Autotools builds of HDF5 turn this capability on by + default for parallel debug builds and off by default for other build types. + CMake has been updated to match this behavior. + + - Added new option to build libaec and zlib inline with CMake. + + Using the CMake FetchContent module, the external filters can populate + content at configure time via any method supported by the ExternalProject + module. Whereas ExternalProject_Add() downloads at build time, the + FetchContent module makes content available immediately, allowing the + configure step to use the content in commands like add_subdirectory(), + include() or file() operations. + + The HDF options (and defaults) for using this are: + BUILD_SZIP_WITH_FETCHCONTENT:BOOL=OFF + LIBAEC_USE_LOCALCONTENT:BOOL=OFF + BUILD_ZLIB_WITH_FETCHCONTENT:BOOL=OFF + ZLIB_USE_LOCALCONTENT:BOOL=OFF + + The CMake variables to control the path and file names: + LIBAEC_TGZ_ORIGPATH:STRING + LIBAEC_TGZ_ORIGNAME:STRING + ZLIB_TGZ_ORIGPATH:STRING + ZLIB_TGZ_ORIGNAME:STRING + + See the CMakeFilters.cmake and config/cmake/cacheinit.cmake files for usage. + + + Library: + -------- + - Added a Subfiling VFD configuration file prefix environment variable + + The Subfiling VFD now checks for values set in a new environment + variable "H5FD_SUBFILING_CONFIG_FILE_PREFIX" to determine if the + application has specified a pathname prefix to apply to the file + path for its configuration file. For example, this can be useful + for cases where the application wishes to write subfiles to a + machine's node-local storage while placing the subfiling configuration + file on a file system readable by all machine nodes. + + - Added H5Pset_selection_io(), H5Pget_selection_io(), and + H5Pget_no_selection_io_cause() API functions to manage the selection I/O + feature. This can be used to enable collective I/O with type conversion, + or it can be used with custom VFDs that support vector or selection I/O. + + - Added H5Pset_modify_write_buf() and H5Pget_modify_write_buf() API + functions to allow the library to modify the contents of write buffers, in + order to avoid malloc/memcpy. Currently only used for type conversion + with selection I/O. + + + Parallel Library: + ----------------- + - + + + Fortran Library: + ---------------- + - Fortran async APIs H5A, H5D, H5ES, H5G, H5F, H5L and H5O were added. + + - Added Fortran APIs: + h5pset_selection_io_f, h5pget_selection_io_f + h5pset_modify_write_buf_f, h5pget_modify_write_buf_f + + C++ Library: + ------------ + - + + + Java Library: + ------------- + - + + + Tools: + ------ + - + + + High-Level APIs: + ---------------- + - + + + C Packet Table API: + ------------------- + - + + + Internal header file: + --------------------- + - + + + Documentation: + -------------- + - Ported the existing VOL Connector Author Guide document to doxygen. + + Added new dox file, VOLConnGuide.dox. + + +Support for new platforms, languages and compilers +================================================== + - + + +Bug Fixes since HDF5-1.14.0 release +=================================== + Library + ------- + - Fixed a bug in H5Ocopy that could generate invalid HDF5 files + + H5Ocopy was missing a check to determine whether the new object's + object header version is greater than version 1. Without this check, + copying of objects with object headers that are smaller than a + certain size would cause H5Ocopy to create an object header for the + new object that has a gap in the header data. According to the + HDF5 File Format Specification, this is not allowed for version + 1 of the object header format. + + Fixes GitHub issue #2653 + + - Fixed H5Pget_vol_cap_flags and H5Pget_vol_id to accept H5P_DEFAULT + + H5Pget_vol_cap_flags and H5Pget_vol_id were updated to correctly + accept H5P_DEFAULT for the 'plist_id' FAPL parameter. Previously, + they would fail if provided with H5P_DEFAULT as the FAPL. + + - Fixed ROS3 VFD anonymous credential usage with h5dump and h5ls + + ROS3 VFD anonymous credential functionality became broken in h5dump + and h5ls in the HDF5 1.14.0 release with the added support for VFD + plugins, which changed the way that the tools handled setting of + credential information that the VFD uses. The tools could be + provided the command-line option of "--s3-cred=(,,)" as a workaround + for anonymous credential usage, but the documentation for this + option stated that anonymous credentials could be used by simply + omitting the option. The latter functionality has been restored. + + Fixes GitHub issue #2406 + + - Fixed memory leaks when processing malformed object header continuation messages + + Malformed object header continuation messages can result in a too-small + buffer being passed to the decode function, which could lead to reading + past the end of the buffer. Additionally, errors in processing these + malformed messages can lead to allocated memory not being cleaned up. + + This fix adds bounds checking and cleanup code to the object header + continuation message processing. + + Fixes GitHub issue #2604 + + - Fixed memory leaks, aborts, and overflows in H5O EFL decode + + The external file list code could call assert(), read past buffer + boundaries, and not properly clean up resources when parsing malformed + external data files messages. + + This fix cleans up allocated memory, adds buffer bounds checks, and + converts asserts to HDF5 error checking. + + Fixes GitHub issue #2605 + + - Fixed potential heap buffer overflow in decoding of link info message + + Detections of buffer overflow were added for decoding version, index + flags, link creation order value, and the next three addresses. The + checkings will remove the potential invalid read of any of these + values that could be triggered by a malformed file. + + Fixes GitHub issue #2603 + + - Memory leak + + Memory leak was detected when running h5dump with "pov". The memory was allocated + via H5FL__malloc() in hdf5/src/H5FL.c + + The fuzzed file "pov" was an HDF5 file containing an illegal continuation message. + When deserializing the object header chunks for the file, memory is allocated for the + array of continuation messages (cont_msg_info->msgs) in continuation message info struct. + As error is encountered in loading the illegal message, the memory allocated for + cont_msg_info->msgs needs to be freed. + + Fixes GitHub issue #2599 + + - Fixed memory leaks that could occur when reading a dataset from a + malformed file + + When attempting to read layout, pline, and efl information for a + dataset, memory leaks could occur if attempting to read pline/efl + information threw an error, which is due to the memory that was + allocated for pline and efl not being properly cleaned up on error. + + Fixes GitHub issue #2602 + + - Fixed potential heap buffer overrun in group info header decoding from malformed file + + H5O__ginfo_decode could sometimes read past allocated memory when parsing a + group info message from the header of a malformed file. + + It now checks buffer size before each read to properly throw an error in these cases. + + Fixes GitHub issue #2601 + + - Fixed potential buffer overrun issues in some object header decode routines + + Several checks were added to H5O__layout_decode and H5O__sdspace_decode to + ensure that memory buffers don't get overrun when decoding buffers read from + a (possibly corrupted) HDF5 file. + + - Fixed issues in the Subfiling VFD when using the SELECT_IOC_EVERY_NTH_RANK + or SELECT_IOC_TOTAL I/O concentrator selection strategies + + Multiple bugs involving these I/O concentrator selection strategies + were fixed, including: + + * A bug that caused the selection strategy to be altered when + criteria for the strategy was specified in the + H5FD_SUBFILING_IOC_SELECTION_CRITERIA environment variable as + a single value, rather than in the old and undocumented + 'integer:integer' format + * Two bugs which caused a request for 'N' I/O concentrators to + result in 'N - 1' I/O concentrators being assigned, which also + lead to issues if only 1 I/O concentrator was requested + + Also added a regression test for these two I/O concentrator selection + strategies to prevent future issues. + + - Fixed a heap buffer overflow that occurs when reading from + a dataset with a compact layout within a malformed HDF5 file + + During opening of a dataset that has a compact layout, the + library allocates a buffer that stores the dataset's raw data. + The dataset's object header that gets written to the file + contains information about how large of a buffer the library + should allocate. If this object header is malformed such that + it causes the library to allocate a buffer that is too small + to hold the dataset's raw data, future I/O to the dataset can + result in heap buffer overflows. To fix this issue, an extra + check is now performed for compact datasets to ensure that + the size of the allocated buffer matches the expected size + of the dataset's raw data (as calculated from the dataset's + dataspace and datatype information). If the two sizes do not + match, opening of the dataset will fail. + + Fixes GitHub issue #2606 + + - Fixed a memory corruption issue that can occur when reading + from a dataset using a hyperslab selection in the file + dataspace and a point selection in the memory dataspace + + When reading from a dataset using a hyperslab selection in + the dataset's file dataspace and a point selection in the + dataset's memory dataspace where the file dataspace's "rank" + is greater than the memory dataspace's "rank", memory corruption + could occur due to an incorrect number of selection points + being copied when projecting the point selection onto the + hyperslab selection's dataspace. + + - Fixed an issue with collective metadata writes of global heap data + + New test failures in parallel netCDF started occurring with debug + builds of HDF5 due to an assertion failure and this was reported in + GitHub issue #2433. The assertion failure began happening after the + collective metadata write pathway in the library was updated to use + vector I/O so that parallel-enabled HDF5 Virtual File Drivers (other + than the existing MPI I/O VFD) can support collective metadata writes. + + The assertion failure was fixed by updating collective metadata writes + to treat global heap metadata as raw data, as done elsewhere in the + library. + + Fixes GitHub issue #2433 + + - Fix CVE-2021-37501 / GHSA-rfgw-5vq3-wrjf + + Check for overflow when calculating on-disk attribute data size. + + A bogus hdf5 file may contain dataspace messages with sizes + which lead to the on-disk data sizes to exceed what is addressable. + When calculating the size, make sure, the multiplication does not + overflow. + The test case was crafted in a way that the overflow caused the + size to be 0. + + Fixes GitHub issue #2458 + + - Fixed buffer overflow error in image decoding function. + + The error occurred in the function for decoding address from the specified + buffer, which is called many times from the function responsible for image + decoding. The length of the buffer is known in the image decoding function, + but no checks are produced, so the buffer overflow can occur in many places, + including callee functions for address decoding. + + The error was fixed by inserting corresponding checks for buffer overflow. + + Fixes GitHub issue #2432 + + + Java Library + ------------ + - + + + Configuration + ------------- + - Fixed syntax of generator expressions used by CMake + + Add quotes around the generator expression should allow CMake to + correctly parse the expression. Generator expressions are typically + parsed after command arguments. If a generator expression contains + spaces, new lines, semicolons or other characters that may be + interpreted as command argument separators, the whole expression + should be surrounded by quotes when passed to a command. Failure to + do so may result in the expression being split and it may no longer + be recognized as a generator expression. + + Fixes GitHub issue #2906 + + - Fixed improper include of Subfiling VFD build directory + + With the release of the Subfiling Virtual File Driver feature, compiler + flags were added to the Autotools build's CPPFLAGS and AM_CPPFLAGS + variables to always include the Subfiling VFD source code directory, + regardless of whether the VFD is enabled and built or not. These flags + are needed because the header files for the VFD contain macros that are + assumed to always be available, such as H5FD_SUBFILING_NAME, so the + header files are unconditionally included in the HDF5 library. However, + these flags are only needed when building HDF5, so they belong in the + H5_CPPFLAGS variable instead. Inclusion in the CPPFLAGS and AM_CPPFLAGS + variables would export these flags to the h5cc and h5c++ wrapper scripts, + as well as the libhdf5.settings file, which would break builds of software + that use HDF5 and try to use or parse information out of these files after + deleting temporary HDF5 build directories. + + Fixes GitHub issues #2422 and #2621 + + - Correct the CMake generated pkg-config file + + The pkg-config file generated by CMake had the order and placement of the + libraries wrong. Also added support for debug library names. + + Changed the order of Libs.private libraries so that dependencies come after + dependents. Did not move the compression libraries into Requires.private + because there was not a way to determine if the compression libraries had + supported pkconfig files. Still recommend that the CMake config file method + be used for building projects with CMake. + + Fixes GitHub issues #1546 and #2259 + + - Force lowercase Fortran module file names + + The Cray Fortran compiler uses uppercase Fortran module file names, which + caused CMake installs to fail. A compiler option was added to use lowercase + instead. + + + Tools + ----- + - Names of objects with square brackets will have trouble without the + special argument, --no-compact-subset, on the h5dump command line. + + h5diff did not have this option and now it has been added. + + Fixes GitHub issue #2682 + + - In the tools traverse function - an error in either visit call + will bypass the cleanup of the local data variables. + + Replaced the H5TOOLS_GOTO_ERROR with just H5TOOLS_ERROR. + + Fixes GitHub issue #2598 + + + Performance + ------------- + - + + + Fortran API + ----------- + - + + High-Level Library + ------------------ + - + + + Fortran High-Level APIs + ----------------------- + - + + + Documentation + ------------- + - + + + F90 APIs + -------- + - + + + C++ APIs + -------- + - + + + Testing + ------- + - + + +Platforms Tested +=================== + + Linux 5.16.14-200.fc35 GNU gcc (GCC) 11.2.1 20220127 (Red Hat 11.2.1-9) + #1 SMP x86_64 GNU/Linux GNU Fortran (GCC) 11.2.1 20220127 (Red Hat 11.2.1-9) + Fedora35 clang version 13.0.0 (Fedora 13.0.0-3.fc35) + (cmake and autotools) + + Linux 5.11.0-34-generic GNU gcc (GCC) 9.3.0-17ubuntu1 + #36-Ubuntu SMP x86_64 GNU/Linux GNU Fortran (GCC) 9.3.0-17ubuntu1 + Ubuntu 20.04 Ubuntu clang version 10.0.0-4 + (cmake and autotools) + + Linux 5.3.18-150300-cray_shasta_c cray-mpich/8.1.16 + #1 SMP x86_64 GNU/Linux Cray clang 14.0.0 + (crusher) GCC 11.2.0 + (cmake) + + Linux 4.14.0-115.35.1.1chaos openmpi 4.0.5 + #1 SMP aarch64 GNU/Linux GCC 9.2.0 (ARM-build-5) + (stria) GCC 7.2.0 (Spack GCC) + (cmake) + + Linux 4.14.0-115.35.1.3chaos spectrum-mpi/rolling-release + #1 SMP ppc64le GNU/Linux clang 12.0.1 + (vortex) GCC 8.3.1 + XL 16.1.1 + (cmake) + + Linux-4.14.0-115.21.2 spectrum-mpi/rolling-release + #1 SMP ppc64le GNU/Linux clang 12.0.1, 14.0.5 + (lassen) GCC 8.3.1 + XL 16.1.1.2, 2021,09.22, 2022.08.05 + (cmake) + + Linux-4.12.14-197.99-default cray-mpich/7.7.14 + #1 SMP x86_64 GNU/Linux cce 12.0.3 + (theta) GCC 11.2.0 + llvm 9.0 + Intel 19.1.2 + + Linux 3.10.0-1160.36.2.el7.ppc64 gcc (GCC) 4.8.5 20150623 (Red Hat 4.8.5-39) + #1 SMP ppc64be GNU/Linux g++ (GCC) 4.8.5 20150623 (Red Hat 4.8.5-39) + Power8 (echidna) GNU Fortran (GCC) 4.8.5 20150623 (Red Hat 4.8.5-39) + + Linux 3.10.0-1160.24.1.el7 GNU C (gcc), Fortran (gfortran), C++ (g++) + #1 SMP x86_64 GNU/Linux compilers: + Centos7 Version 4.8.5 20150623 (Red Hat 4.8.5-4) + (jelly/kituo/moohan) Version 4.9.3, Version 5.3.0, Version 6.3.0, + Version 7.2.0, Version 8.3.0, Version 9.1.0 + Intel(R) C (icc), C++ (icpc), Fortran (icc) + compilers: + Version 17.0.0.098 Build 20160721 + GNU C (gcc) and C++ (g++) 4.8.5 compilers + with NAG Fortran Compiler Release 6.1(Tozai) + Intel(R) C (icc) and C++ (icpc) 17.0.0.098 compilers + with NAG Fortran Compiler Release 6.1(Tozai) + MPICH 3.1.4 compiled with GCC 4.9.3 + MPICH 3.3 compiled with GCC 7.2.0 + OpenMPI 2.1.6 compiled with icc 18.0.1 + OpenMPI 3.1.3 and 4.0.0 compiled with GCC 7.2.0 + PGI C, Fortran, C++ for 64-bit target on + x86_64; + Version 19.10-0 + (autotools and cmake) + + Linux-3.10.0-1160.0.0.1chaos openmpi-4.1.2 + #1 SMP x86_64 GNU/Linux clang 6.0.0, 11.0.1 + (quartz) GCC 7.3.0, 8.1.0 + Intel 19.0.4, 2022.2, oneapi.2022.2 + + Linux-3.10.0-1160.71.1.1chaos openmpi/4.1 + #1 SMP x86_64 GNU/Linux GCC 7.2.0 + (skybridge) Intel/19.1 + (cmake) + + Linux-3.10.0-1160.66.1.1chaos openmpi/4.1 + #1 SMP x86_64 GNU/Linux GCC 7.2.0 + (attaway) Intel/19.1 + (cmake) + + Linux-3.10.0-1160.59.1.1chaos openmpi/4.1 + #1 SMP x86_64 GNU/Linux Intel/19.1 + (chama) (cmake) + + macOS Apple M1 11.6 Apple clang version 12.0.5 (clang-1205.0.22.11) + Darwin 20.6.0 arm64 gfortran GNU Fortran (Homebrew GCC 11.2.0) 11.1.0 + (macmini-m1) Intel icc/icpc/ifort version 2021.3.0 202106092021.3.0 20210609 + + macOS Big Sur 11.3.1 Apple clang version 12.0.5 (clang-1205.0.22.9) + Darwin 20.4.0 x86_64 gfortran GNU Fortran (Homebrew GCC 10.2.0_3) 10.2.0 + (bigsur-1) Intel icc/icpc/ifort version 2021.2.0 20210228 + + macOS High Sierra 10.13.6 Apple LLVM version 10.0.0 (clang-1000.10.44.4) + 64-bit gfortran GNU Fortran (GCC) 6.3.0 + (bear) Intel icc/icpc/ifort version 19.0.4.233 20190416 + + macOS Sierra 10.12.6 Apple LLVM version 9.0.0 (clang-900.39.2) + 64-bit gfortran GNU Fortran (GCC) 7.4.0 + (kite) Intel icc/icpc/ifort version 17.0.2 + + Mac OS X El Capitan 10.11.6 Apple clang version 7.3.0 from Xcode 7.3 + 64-bit gfortran GNU Fortran (GCC) 5.2.0 + (osx1011test) Intel icc/icpc/ifort version 16.0.2 + + + Linux 2.6.32-573.22.1.el6 GNU C (gcc), Fortran (gfortran), C++ (g++) + #1 SMP x86_64 GNU/Linux compilers: + Centos6 Version 4.4.7 20120313 + (platypus) Version 4.9.3, 5.3.0, 6.2.0 + MPICH 3.1.4 compiled with GCC 4.9.3 + PGI C, Fortran, C++ for 64-bit target on + x86_64; + Version 19.10-0 + + Windows 10 x64 Visual Studio 2015 w/ Intel C/C++/Fortran 18 (cmake) + Visual Studio 2017 w/ Intel C/C++/Fortran 19 (cmake) + Visual Studio 2019 w/ clang 12.0.0 + with MSVC-like command-line (C/C++ only - cmake) + Visual Studio 2019 w/ Intel C/C++/Fortran oneAPI 2022 (cmake) + Visual Studio 2022 w/ clang 15.0.1 + with MSVC-like command-line (C/C++ only - cmake) + Visual Studio 2022 w/ Intel C/C++/Fortran oneAPI 2022 (cmake) + Visual Studio 2019 w/ MSMPI 10.1 (C only - cmake) + + +Known Problems +============== + + CMake files do not behave correctly with paths containing spaces. + Do not use spaces in paths because the required escaping for handling spaces + results in very complex and fragile build files. + ADB - 2019/05/07 + + At present, metadata cache images may not be generated by parallel + applications. Parallel applications can read files with metadata cache + images, but since this is a collective operation, a deadlock is possible + if one or more processes do not participate. + + CPP ptable test fails on both VS2017 and VS2019 with Intel compiler, JIRA + issue: HDFFV-10628. This test will pass with VS2015 with Intel compiler. + + The subsetting option in ph5diff currently will fail and should be avoided. + The subsetting option works correctly in serial h5diff. + + Several tests currently fail on certain platforms: + MPI_TEST-t_bigio fails with spectrum-mpi on ppc64le platforms. + + MPI_TEST-t_subfiling_vfd and MPI_TEST_EXAMPLES-ph5_subfiling fail with + cray-mpich on theta and with XL compilers on ppc64le platforms. + + MPI_TEST_testphdf5_tldsc fails with cray-mpich 7.7 on cori and theta. + + Known problems in previous releases can be found in the HISTORY*.txt files + in the HDF5 source. Please report any new problems found to + help@hdfgroup.org. + + +CMake vs. Autotools installations +================================= +While both build systems produce similar results, there are differences. +Each system produces the same set of folders on linux (only CMake works +on standard Windows); bin, include, lib and share. Autotools places the +COPYING and RELEASE.txt file in the root folder, CMake places them in +the share folder. + +The bin folder contains the tools and the build scripts. Additionally, CMake +creates dynamic versions of the tools with the suffix "-shared". Autotools +installs one set of tools depending on the "--enable-shared" configuration +option. + build scripts + ------------- + Autotools: h5c++, h5cc, h5fc + CMake: h5c++, h5cc, h5hlc++, h5hlcc + +The include folder holds the header files and the fortran mod files. CMake +places the fortran mod files into separate shared and static subfolders, +while Autotools places one set of mod files into the include folder. Because +CMake produces a tools library, the header files for tools will appear in +the include folder. + +The lib folder contains the library files, and CMake adds the pkgconfig +subfolder with the hdf5*.pc files used by the bin/build scripts created by +the CMake build. CMake separates the C interface code from the fortran code by +creating C-stub libraries for each Fortran library. In addition, only CMake +installs the tools library. The names of the szip libraries are different +between the build systems. + +The share folder will have the most differences because CMake builds include +a number of CMake specific files for support of CMake's find_package and support +for the HDF5 Examples CMake project. + +The issues with the gif tool are: + HDFFV-10592 CVE-2018-17433 + HDFFV-10593 CVE-2018-17436 + HDFFV-11048 CVE-2020-10809 +These CVE issues have not yet been addressed and are avoided by not building +the gif tool by default. Enable building the High-Level tools with these options: + autotools: --enable-hlgiftools + cmake: HDF5_BUILD_HL_GIF_TOOLS=ON + + + %%%%1.14.0%%%% HDF5 version 1.14.0 released on 2022-12-28 diff --git a/release_docs/README_HPC b/release_docs/README_HPC index c2be492..e3728a6 100644 --- a/release_docs/README_HPC +++ b/release_docs/README_HPC @@ -39,9 +39,6 @@ If no branch is specified, then the 'develop' version will be checked out. If no source directory is specified, then the source will be located in the 'hdf5' directory. The CMake scripts expect the source to be in a directory named hdf5-<version string>, where 'version string' uses the format '1.xx.xx'. -For example, for the current 'develop' version, the "hdf5" directory should -be renamed "hdf5-1.13.0", or for the first hdf5_1_12_0 pre-release version, -it should be renamed "hdf5-1.12.0-5". If the version number is not known a priori, the version string can be obtained by running bin/h5vers in the top level directory of the source clone, and @@ -65,15 +62,15 @@ scripts on compute nodes and to cross-compile for compute node hardware using a cross-compiling emulator. The setup steps will make default settings for parallel or serial only builds available to the CMake command. - 1. For the current 'develop' version the "hdf5" directory should be renamed - "hdf5-1.13.0". + 1. The "hdf5" directory should be renamed hdf5-<version string>. For + further explanation see section II. 2. Three cmake script files need to be copied to the working directory, or have symbolic links to them, created in the working directory: - hdf5-1.13.0/config/cmake/scripts/HDF5config.cmake - hdf5-1.13.0/config/cmake/scripts/CTestScript.cmake - hdf5-1.13.0/config/cmake/scripts/HDF5options.cmake + hdf5-<version string>/config/cmake/scripts/HDF5config.cmake + hdf5-<version string>/config/cmake/scripts/CTestScript.cmake + hdf5-<version string>/config/cmake/scripts/HDF5options.cmake should be copied to the working directory. @@ -82,7 +79,7 @@ parallel or serial only builds available to the CMake command. CTestScript.cmake HDF5config.cmake HDF5options.cmake - hdf5-1.13.0 + hdf5-<version string> Additionally, when the ctest command runs [1], it will add a build directory in the working directory. @@ -145,7 +142,8 @@ cori, another CrayXC40, that line is replaced by "#SBATCH -C knl,quad,cache". For cori (and other machines), the values in LOCAL_BATCH_SCRIPT_NAME and LOCAL_BATCH_SCRIPT_PARALLEL_NAME in the config/cmake/scripts/HPC/sbatch-HDF5options.cmake file can be replaced by cori_knl_ctestS.sl and cori_knl_ctestS.sl, or the lines -can be edited in the batch files in hdf5-1.13.0/bin/batch. +can be edited in the batch files in hdf5-<version string>/bin/batch (see section II +for version string explanation). ======================================================================== V. Manual alternatives @@ -153,11 +151,11 @@ V. Manual alternatives If using ctest is undesirable, one can create a build directory and run the cmake configure command, for example -"/projects/Mutrino/hpcsoft/cle6.0/common/cmake/3.18/bin/cmake" --C "<working directory>/hdf5-1.14.x/config/cmake/cacheinit.cmake" +"/projects/Mutrino/hpcsoft/cle6.0/common/cmake/<CMake version>/bin/cmake" +-C "<working directory>/hdf5-<version string>/config/cmake/cacheinit.cmake" -DCMAKE_BUILD_TYPE:STRING=Release -DHDF5_BUILD_FORTRAN:BOOL=ON -DHDF5_BUILD_JAVA:BOOL=OFF --DCMAKE_INSTALL_PREFIX:PATH=<working directory>/HDF_Group/HDF5/1.14.x +-DCMAKE_INSTALL_PREFIX:PATH=<working directory>/HDF_Group/HDF5/<version string> -DHDF5_ENABLE_Z_LIB_SUPPORT:BOOL=OFF -DHDF5_ENABLE_SZIP_SUPPORT:BOOL=OFF -DHDF5_ENABLE_PARALLEL:BOOL=ON -DHDF5_BUILD_CPP_LIB:BOOL=OFF -DHDF5_BUILD_JAVA:BOOL=OFF -DHDF5_ENABLE_THREADSAFE:BOOL=OFF @@ -168,7 +166,7 @@ configure command, for example -DLOCAL_BATCH_SCRIPT_NAME:STRING=knl_ctestS.sl -DLOCAL_BATCH_SCRIPT_PARALLEL_NAME:STRING=knl_ctestP.sl -DSITE:STRING=mutrino -DBUILDNAME:STRING=par-knl_GCC493-SHARED-Linux-4.4.156-94.61.1.16335.0.PTF.1107299-default-x86_64 -"-GUnix Makefiles" "" "<working directory>/hdf5-1.14.x" +"-GUnix Makefiles" "" "<working directory>/hdf5-<version string>" followed by make and batch jobs to run tests. diff --git a/release_docs/RELEASE.txt b/release_docs/RELEASE.txt index d956a1e..a163f35 100644 --- a/release_docs/RELEASE.txt +++ b/release_docs/RELEASE.txt @@ -1,4 +1,4 @@ -HDF5 version 1.14.1-1 currently under development +HDF5 version 1.14.2-1 currently under development ================================================================================ @@ -47,117 +47,12 @@ New Features Configuration: ------------- - - Added new CMake options for building and running HDF5 API tests - (Experimental) - - HDF5 API tests are an experimental feature, primarily targeted - toward HDF5 VOL connector authors, that is currently being developed. - These tests exercise the HDF5 API and are being integrated back - into the HDF5 library from the HDF5 VOL tests repository - (https://github.com/HDFGroup/vol-tests). To support this feature, - the following new options have been added to CMake: - - * HDF5_TEST_API: ON/OFF (Default: OFF) - - Controls whether the HDF5 API tests will be built. These tests - will only be run during testing of HDF5 if the HDF5_TEST_SERIAL - (for serial tests) and HDF5_TEST_PARALLEL (for parallel tests) - options are enabled. - - * HDF5_TEST_API_INSTALL: ON/OFF (Default: OFF) - - Controls whether the HDF5 API test executables will be installed - on the system alongside the HDF5 library. This option is currently - not functional. - - * HDF5_TEST_API_ENABLE_ASYNC: ON/OFF (Default: OFF) - - Controls whether the HDF5 Async API tests will be built. These - tests will only be run if the VOL connector used supports Async - operations. - - * HDF5_TEST_API_ENABLE_DRIVER: ON/OFF (Default: OFF) - - Controls whether to build the HDF5 API test driver program. This - test driver program is useful for VOL connectors that use a - client/server model where the server needs to be up and running - before the VOL connector can function. This option is currently - not functional. - - * HDF5_TEST_API_SERVER: String (Default: "") - - Used to specify a path to the server executable that the test - driver program should execute. - - - Added support for CMake presets file. - - CMake supports two main files, CMakePresets.json and CMakeUserPresets.json, - that allow users to specify common configure options and share them with others. - HDF added a CMakePresets.json file of a typical configuration and support - file, config/cmake-presets/hidden-presets.json. - Also added a section to INSTALL_CMake.txt with very basic explanation of the - process to use CMakePresets. - - - Deprecated and removed old SZIP library in favor of LIBAEC library - - LIBAEC library has been used in HDF5 binaries as the szip library of choice - for a few years. We are removing the options for using the old SZIP library. - - Also removed the config/cmake/FindSZIP.cmake file. - - - Enabled instrumentation of the library by default in CMake for parallel - debug builds - - HDF5 can be configured to instrument portions of the parallel library to - aid in debugging. Autotools builds of HDF5 turn this capability on by - default for parallel debug builds and off by default for other build types. - CMake has been updated to match this behavior. - - - Added new option to build libaec and zlib inline with CMake. - - Using the CMake FetchContent module, the external filters can populate - content at configure time via any method supported by the ExternalProject - module. Whereas ExternalProject_Add() downloads at build time, the - FetchContent module makes content available immediately, allowing the - configure step to use the content in commands like add_subdirectory(), - include() or file() operations. - - The HDF options (and defaults) for using this are: - BUILD_SZIP_WITH_FETCHCONTENT:BOOL=OFF - LIBAEC_USE_LOCALCONTENT:BOOL=OFF - BUILD_ZLIB_WITH_FETCHCONTENT:BOOL=OFF - ZLIB_USE_LOCALCONTENT:BOOL=OFF - - The CMake variables to control the path and file names: - LIBAEC_TGZ_ORIGPATH:STRING - LIBAEC_TGZ_ORIGNAME:STRING - ZLIB_TGZ_ORIGPATH:STRING - ZLIB_TGZ_ORIGNAME:STRING - - See the CMakeFilters.cmake and config/cmake/cacheinit.cmake files for usage. + - Library: -------- - - Added a Subfiling VFD configuration file prefix environment variable - - The Subfiling VFD now checks for values set in a new environment - variable "H5FD_SUBFILING_CONFIG_FILE_PREFIX" to determine if the - application has specified a pathname prefix to apply to the file - path for its configuration file. For example, this can be useful - for cases where the application wishes to write subfiles to a - machine's node-local storage while placing the subfiling configuration - file on a file system readable by all machine nodes. - - - Added H5Pset_selection_io(), H5Pget_selection_io(), and - H5Pget_no_selection_io_cause() API functions to manage the selection I/O - feature. This can be used to enable collective I/O with type conversion, - or it can be used with custom VFDs that support vector or selection I/O. - - - Added H5Pset_modify_write_buf() and H5Pget_modify_write_buf() API - functions to allow the library to modify the contents of write buffers, in - order to avoid malloc/memcpy. Currently only used for type conversion - with selection I/O. + - Parallel Library: @@ -167,11 +62,8 @@ New Features Fortran Library: ---------------- - - Fortran async APIs H5A, H5D, H5ES, H5G, H5F, H5L and H5O were added. + - - - Added Fortran APIs: - h5pset_selection_io_f, h5pget_selection_io_f - h5pset_modify_write_buf_f, h5pget_modify_write_buf_f C++ Library: ------------ @@ -205,9 +97,7 @@ New Features Documentation: -------------- - - Ported the existing VOL Connector Author Guide document to doxygen. - - Added new dox file, VOLConnGuide.dox. + - Support for new platforms, languages and compilers @@ -215,199 +105,11 @@ Support for new platforms, languages and compilers - -Bug Fixes since HDF5-1.14.0 release +Bug Fixes since HDF5-1.14.1 release =================================== Library ------- - - Fixed a bug in H5Ocopy that could generate invalid HDF5 files - - H5Ocopy was missing a check to determine whether the new object's - object header version is greater than version 1. Without this check, - copying of objects with object headers that are smaller than a - certain size would cause H5Ocopy to create an object header for the - new object that has a gap in the header data. According to the - HDF5 File Format Specification, this is not allowed for version - 1 of the object header format. - - Fixes GitHub issue #2653 - - - Fixed H5Pget_vol_cap_flags and H5Pget_vol_id to accept H5P_DEFAULT - - H5Pget_vol_cap_flags and H5Pget_vol_id were updated to correctly - accept H5P_DEFAULT for the 'plist_id' FAPL parameter. Previously, - they would fail if provided with H5P_DEFAULT as the FAPL. - - - Fixed ROS3 VFD anonymous credential usage with h5dump and h5ls - - ROS3 VFD anonymous credential functionality became broken in h5dump - and h5ls in the HDF5 1.14.0 release with the added support for VFD - plugins, which changed the way that the tools handled setting of - credential information that the VFD uses. The tools could be - provided the command-line option of "--s3-cred=(,,)" as a workaround - for anonymous credential usage, but the documentation for this - option stated that anonymous credentials could be used by simply - omitting the option. The latter functionality has been restored. - - Fixes GitHub issue #2406 - - - Fixed memory leaks when processing malformed object header continuation messages - - Malformed object header continuation messages can result in a too-small - buffer being passed to the decode function, which could lead to reading - past the end of the buffer. Additionally, errors in processing these - malformed messages can lead to allocated memory not being cleaned up. - - This fix adds bounds checking and cleanup code to the object header - continuation message processing. - - Fixes GitHub issue #2604 - - - Fixed memory leaks, aborts, and overflows in H5O EFL decode - - The external file list code could call assert(), read past buffer - boundaries, and not properly clean up resources when parsing malformed - external data files messages. - - This fix cleans up allocated memory, adds buffer bounds checks, and - converts asserts to HDF5 error checking. - - Fixes GitHub issue #2605 - - - Fixed potential heap buffer overflow in decoding of link info message - - Detections of buffer overflow were added for decoding version, index - flags, link creation order value, and the next three addresses. The - checkings will remove the potential invalid read of any of these - values that could be triggered by a malformed file. - - Fixes GitHub issue #2603 - - - Memory leak - - Memory leak was detected when running h5dump with "pov". The memory was allocated - via H5FL__malloc() in hdf5/src/H5FL.c - - The fuzzed file "pov" was an HDF5 file containing an illegal continuation message. - When deserializing the object header chunks for the file, memory is allocated for the - array of continuation messages (cont_msg_info->msgs) in continuation message info struct. - As error is encountered in loading the illegal message, the memory allocated for - cont_msg_info->msgs needs to be freed. - - Fixes GitHub issue #2599 - - - Fixed memory leaks that could occur when reading a dataset from a - malformed file - - When attempting to read layout, pline, and efl information for a - dataset, memory leaks could occur if attempting to read pline/efl - information threw an error, which is due to the memory that was - allocated for pline and efl not being properly cleaned up on error. - - Fixes GitHub issue #2602 - - - Fixed potential heap buffer overrun in group info header decoding from malformed file - - H5O__ginfo_decode could sometimes read past allocated memory when parsing a - group info message from the header of a malformed file. - - It now checks buffer size before each read to properly throw an error in these cases. - - Fixes GitHub issue #2601 - - - Fixed potential buffer overrun issues in some object header decode routines - - Several checks were added to H5O__layout_decode and H5O__sdspace_decode to - ensure that memory buffers don't get overrun when decoding buffers read from - a (possibly corrupted) HDF5 file. - - - Fixed issues in the Subfiling VFD when using the SELECT_IOC_EVERY_NTH_RANK - or SELECT_IOC_TOTAL I/O concentrator selection strategies - - Multiple bugs involving these I/O concentrator selection strategies - were fixed, including: - - * A bug that caused the selection strategy to be altered when - criteria for the strategy was specified in the - H5FD_SUBFILING_IOC_SELECTION_CRITERIA environment variable as - a single value, rather than in the old and undocumented - 'integer:integer' format - * Two bugs which caused a request for 'N' I/O concentrators to - result in 'N - 1' I/O concentrators being assigned, which also - lead to issues if only 1 I/O concentrator was requested - - Also added a regression test for these two I/O concentrator selection - strategies to prevent future issues. - - - Fixed a heap buffer overflow that occurs when reading from - a dataset with a compact layout within a malformed HDF5 file - - During opening of a dataset that has a compact layout, the - library allocates a buffer that stores the dataset's raw data. - The dataset's object header that gets written to the file - contains information about how large of a buffer the library - should allocate. If this object header is malformed such that - it causes the library to allocate a buffer that is too small - to hold the dataset's raw data, future I/O to the dataset can - result in heap buffer overflows. To fix this issue, an extra - check is now performed for compact datasets to ensure that - the size of the allocated buffer matches the expected size - of the dataset's raw data (as calculated from the dataset's - dataspace and datatype information). If the two sizes do not - match, opening of the dataset will fail. - - Fixes GitHub issue #2606 - - - Fixed a memory corruption issue that can occur when reading - from a dataset using a hyperslab selection in the file - dataspace and a point selection in the memory dataspace - - When reading from a dataset using a hyperslab selection in - the dataset's file dataspace and a point selection in the - dataset's memory dataspace where the file dataspace's "rank" - is greater than the memory dataspace's "rank", memory corruption - could occur due to an incorrect number of selection points - being copied when projecting the point selection onto the - hyperslab selection's dataspace. - - - Fixed an issue with collective metadata writes of global heap data - - New test failures in parallel netCDF started occurring with debug - builds of HDF5 due to an assertion failure and this was reported in - GitHub issue #2433. The assertion failure began happening after the - collective metadata write pathway in the library was updated to use - vector I/O so that parallel-enabled HDF5 Virtual File Drivers (other - than the existing MPI I/O VFD) can support collective metadata writes. - - The assertion failure was fixed by updating collective metadata writes - to treat global heap metadata as raw data, as done elsewhere in the - library. - - Fixes GitHub issue #2433 - - - Fix CVE-2021-37501 / GHSA-rfgw-5vq3-wrjf - - Check for overflow when calculating on-disk attribute data size. - - A bogus hdf5 file may contain dataspace messages with sizes - which lead to the on-disk data sizes to exceed what is addressable. - When calculating the size, make sure, the multiplication does not - overflow. - The test case was crafted in a way that the overflow caused the - size to be 0. - - Fixes GitHub issue #2458 - - - Fixed buffer overflow error in image decoding function. - - The error occurred in the function for decoding address from the specified - buffer, which is called many times from the function responsible for image - decoding. The length of the buffer is known in the image decoding function, - but no checks are produced, so the buffer overflow can occur in many places, - including callee functions for address decoding. - - The error was fixed by inserting corresponding checks for buffer overflow. - - Fixes GitHub issue #2432 + - Java Library @@ -417,72 +119,12 @@ Bug Fixes since HDF5-1.14.0 release Configuration ------------- - - Fixed syntax of generator expressions used by CMake - - Add quotes around the generator expression should allow CMake to - correctly parse the expression. Generator expressions are typically - parsed after command arguments. If a generator expression contains - spaces, new lines, semicolons or other characters that may be - interpreted as command argument separators, the whole expression - should be surrounded by quotes when passed to a command. Failure to - do so may result in the expression being split and it may no longer - be recognized as a generator expression. - - Fixes GitHub issue #2906 - - - Fixed improper include of Subfiling VFD build directory - - With the release of the Subfiling Virtual File Driver feature, compiler - flags were added to the Autotools build's CPPFLAGS and AM_CPPFLAGS - variables to always include the Subfiling VFD source code directory, - regardless of whether the VFD is enabled and built or not. These flags - are needed because the header files for the VFD contain macros that are - assumed to always be available, such as H5FD_SUBFILING_NAME, so the - header files are unconditionally included in the HDF5 library. However, - these flags are only needed when building HDF5, so they belong in the - H5_CPPFLAGS variable instead. Inclusion in the CPPFLAGS and AM_CPPFLAGS - variables would export these flags to the h5cc and h5c++ wrapper scripts, - as well as the libhdf5.settings file, which would break builds of software - that use HDF5 and try to use or parse information out of these files after - deleting temporary HDF5 build directories. - - Fixes GitHub issues #2422 and #2621 - - - Correct the CMake generated pkg-config file - - The pkg-config file generated by CMake had the order and placement of the - libraries wrong. Also added support for debug library names. - - Changed the order of Libs.private libraries so that dependencies come after - dependents. Did not move the compression libraries into Requires.private - because there was not a way to determine if the compression libraries had - supported pkconfig files. Still recommend that the CMake config file method - be used for building projects with CMake. - - Fixes GitHub issues #1546 and #2259 - - - Force lowercase Fortran module file names - - The Cray Fortran compiler uses uppercase Fortran module file names, which - caused CMake installs to fail. A compiler option was added to use lowercase - instead. + - Tools ----- - - Names of objects with square brackets will have trouble without the - special argument, --no-compact-subset, on the h5dump command line. - - h5diff did not have this option and now it has been added. - - Fixes GitHub issue #2682 - - - In the tools traverse function - an error in either visit call - will bypass the cleanup of the local data variables. - - Replaced the H5TOOLS_GOTO_ERROR with just H5TOOLS_ERROR. - - Fixes GitHub issue #2598 + - Performance diff --git a/src/H5public.h b/src/H5public.h index 185deb0..193c8b9 100644 --- a/src/H5public.h +++ b/src/H5public.h @@ -83,7 +83,7 @@ /** * For tweaks, bug-fixes, or development */ -#define H5_VERS_RELEASE 1 +#define H5_VERS_RELEASE 2 /** * For pre-releases like \c snap0. Empty string for official releases. */ @@ -91,7 +91,7 @@ /** * Full version string */ -#define H5_VERS_INFO "HDF5 library version: 1.14.1-1" +#define H5_VERS_INFO "HDF5 library version: 1.14.2-1" #define H5check() H5check_version(H5_VERS_MAJOR, H5_VERS_MINOR, H5_VERS_RELEASE) diff --git a/tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_version_test.ddl b/tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_version_test.ddl index dd6652a..d320356 100644 --- a/tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_version_test.ddl +++ b/tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_version_test.ddl @@ -11,7 +11,7 @@ GROUP "/" { USER_DEFINED_FILTER { FILTER_ID 260 COMMENT dynlib4 - PARAMS { 9 1 14 1 } + PARAMS { 9 1 14 2 } } } FILLVALUE { @@ -33,7 +33,7 @@ GROUP "/" { USER_DEFINED_FILTER { FILTER_ID 260 COMMENT dynlib4 - PARAMS { 9 1 14 1 } + PARAMS { 9 1 14 2 } } } FILLVALUE { @@ -55,7 +55,7 @@ GROUP "/" { USER_DEFINED_FILTER { FILTER_ID 260 COMMENT dynlib4 - PARAMS { 9 1 14 1 } + PARAMS { 9 1 14 2 } } } FILLVALUE { @@ -77,7 +77,7 @@ GROUP "/" { USER_DEFINED_FILTER { FILTER_ID 260 COMMENT dynlib4 - PARAMS { 9 1 14 1 } + PARAMS { 9 1 14 2 } } } FILLVALUE { @@ -99,7 +99,7 @@ GROUP "/" { USER_DEFINED_FILTER { FILTER_ID 260 COMMENT dynlib4 - PARAMS { 9 1 14 1 } + PARAMS { 9 1 14 2 } } } FILLVALUE { @@ -121,7 +121,7 @@ GROUP "/" { USER_DEFINED_FILTER { FILTER_ID 260 COMMENT dynlib4 - PARAMS { 9 1 14 1 } + PARAMS { 9 1 14 2 } } } FILLVALUE { @@ -143,7 +143,7 @@ GROUP "/" { USER_DEFINED_FILTER { FILTER_ID 260 COMMENT dynlib4 - PARAMS { 9 1 14 1 } + PARAMS { 9 1 14 2 } } } FILLVALUE { |