diff options
| -rw-r--r-- | config/cmake/HDFCompilerFlags.cmake | 16 | ||||
| -rw-r--r-- | java/src/jni/h5Constants.c | 16 | ||||
| -rw-r--r-- | tools/test/h5copy/testh5copy.sh.in | 9 | ||||
| -rw-r--r-- | tools/test/h5repack/h5repack.sh.in | 9 |
4 files changed, 35 insertions, 15 deletions
diff --git a/config/cmake/HDFCompilerFlags.cmake b/config/cmake/HDFCompilerFlags.cmake index 37ddcbb..adace89 100644 --- a/config/cmake/HDFCompilerFlags.cmake +++ b/config/cmake/HDFCompilerFlags.cmake @@ -346,10 +346,12 @@ endif () # By default, CMake adds NDEBUG to CMAKE_${lang}_FLAGS for Release build types # This option will force/override the default setting for all configurations #----------------------------------------------------------------------------- -option (HDF5_ENABLE_ASSERTS "Determines whether NDEBUG is defined to control assertions." OFF) -if (HDF5_ENABLE_ASSERTS) +#option (HDF5_ENABLE_ASSERTS "Determines whether NDEBUG is defined to control assertions." OFF) +set (HDF5_ENABLE_ASSERTS "OFF" CACHE STRING "Determines whether NDEBUG is defined to control assertions (OFF NO YES)") +set_property (CACHE HDF5_ENABLE_ASSERTS PROPERTY STRINGS OFF NO YES) +if (HDF5_ENABLE_ASSERTS MATCHES "YES") add_compile_options ("-UNDEBUG") -else () +elseif (HDF5_ENABLE_ASSERTS MATCHES "NO") add_compile_options ("-DNDEBUG") endif () MARK_AS_ADVANCED (HDF5_ENABLE_ASSERTS) @@ -358,8 +360,10 @@ MARK_AS_ADVANCED (HDF5_ENABLE_ASSERTS) # Option for --enable-symbols # This option will force/override the default setting for all configurations #----------------------------------------------------------------------------- -option (HDF5_ENABLE_SYMBOLS "Add debug symbols to the library independent of the build mode and optimization level." OFF) -if (HDF5_ENABLE_SYMBOLS) +#option (HDF5_ENABLE_SYMBOLS "Add debug symbols to the library independent of the build mode and optimization level." OFF) +set (HDF5_ENABLE_SYMBOLS "OFF" CACHE STRING "Add debug symbols to the library independent of the build mode and optimization level (OFF NO YES)") +set_property (CACHE HDF5_ENABLE_SYMBOLS PROPERTY STRINGS OFF NO YES) +if (HDF5_ENABLE_SYMBOLS MATCHES "YES") if (CMAKE_C_COMPILER_ID STREQUAL "Intel") set (CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -g") elseif (CMAKE_C_COMPILER_ID STREQUAL "GNU") @@ -372,7 +376,7 @@ if (HDF5_ENABLE_SYMBOLS) set (CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -g") endif () endif () -else () +elseif (HDF5_ENABLE_SYMBOLS MATCHES "NO") if (CMAKE_C_COMPILER_ID STREQUAL "Intel") set (CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -Wl,-s") elseif (CMAKE_C_COMPILER_ID STREQUAL "GNU") diff --git a/java/src/jni/h5Constants.c b/java/src/jni/h5Constants.c index ac55a13..9f52b3c 100644 --- a/java/src/jni/h5Constants.c +++ b/java/src/jni/h5Constants.c @@ -453,7 +453,13 @@ Java_hdf_hdf5lib_HDF5Constants_H5FD_1DIRECT(JNIEnv *env, jclass cls) { JNIEXPORT jlong JNICALL Java_hdf_hdf5lib_HDF5Constants_H5FD_1FAMILY(JNIEnv *env, jclass cls) { return H5FD_FAMILY; } JNIEXPORT jlong JNICALL -Java_hdf_hdf5lib_HDF5Constants_H5FD_1HDFS(JNIEnv *env, jclass cls) { return H5FD_HDFS; } +Java_hdf_hdf5lib_HDF5Constants_H5FD_1HDFS(JNIEnv *env, jclass cls) { +#ifdef H5_HAVE_LIBHDFS + return H5FD_HDFS; +#else + return -1; +#endif +} JNIEXPORT jlong JNICALL Java_hdf_hdf5lib_HDF5Constants_H5FD_1LOG(JNIEnv *env, jclass cls) { return H5FD_LOG; } JNIEXPORT jlong JNICALL @@ -463,7 +469,13 @@ Java_hdf_hdf5lib_HDF5Constants_H5FD_1MULTI(JNIEnv *env, jclass cls) { return H5F JNIEXPORT jlong JNICALL Java_hdf_hdf5lib_HDF5Constants_H5FD_1SEC2(JNIEnv *env, jclass cls) { return H5FD_SEC2; } JNIEXPORT jlong JNICALL -Java_hdf_hdf5lib_HDF5Constants_H5FD_1ROS3(JNIEnv *env, jclass cls) { return H5FD_ROS3; } +Java_hdf_hdf5lib_HDF5Constants_H5FD_1ROS3(JNIEnv *env, jclass cls) { +#ifdef H5_HAVE_ROS3_VFD + return H5FD_ROS3; +#else + return -1; +#endif +} JNIEXPORT jlong JNICALL Java_hdf_hdf5lib_HDF5Constants_H5FD_1STDIO(JNIEnv *env, jclass cls) { return H5FD_STDIO; } JNIEXPORT jlong JNICALL diff --git a/tools/test/h5copy/testh5copy.sh.in b/tools/test/h5copy/testh5copy.sh.in index 50758b5..2440ca4 100644 --- a/tools/test/h5copy/testh5copy.sh.in +++ b/tools/test/h5copy/testh5copy.sh.in @@ -504,22 +504,21 @@ fi TOOLTEST -i $TESTFILE -o $TESTDIR/dsrename.out.h5 -v -s compound -d rename echo "Test copying empty, 'full' & 'nested' groups" -if test $USE_FILTER_DEFLATE = "yes" ; then TOOLTEST -i $TESTFILE -o $TESTDIR/grp_empty.out.h5 -v -s grp_empty -d grp_empty -fi +if test $USE_FILTER_DEFLATE = "yes" ; then TOOLTEST -i $TESTFILE -o $TESTDIR/grp_dsets.out.h5 -v -s grp_dsets -d grp_dsets TOOLTEST -i $TESTFILE -o $TESTDIR/grp_nested.out.h5 -v -s grp_nested -d grp_nested +fi TOOLTEST -i $TESTFILE -o $TESTDIR/grp_attr.out.h5 -v -s grp_attr -d grp_attr -if test $USE_FILTER_DEFLATE = "yes" ; then echo "Test copying dataset within group in source file to group in destination" TOOLTEST_PREFILL -i $TESTFILE -o $TESTDIR/simple_group.out.h5 grp_dsets grp_dsets /grp_dsets/simple /grp_dsets/simple_group +if test $USE_FILTER_DEFLATE = "yes" ; then echo "Test copying & renaming group" TOOLTEST -i $TESTFILE -o $TESTDIR/grp_rename.out.h5 -v -s grp_dsets -d grp_rename -fi - echo "Test copying 'full' group hierarchy into group in destination file" TOOLTEST_PREFILL -i $TESTFILE -o $TESTDIR/grp_dsets_rename.out.h5 grp_dsets grp_rename grp_dsets /grp_rename/grp_dsets +fi echo "Test copying objects into group hier. that doesn't exist yet in destination file" TOOLTEST -i $TESTFILE -o $TESTDIR/A_B1_simple.out.h5 -vp -s simple -d /A/B1/simple diff --git a/tools/test/h5repack/h5repack.sh.in b/tools/test/h5repack/h5repack.sh.in index 282ba76..c515786 100644 --- a/tools/test/h5repack/h5repack.sh.in +++ b/tools/test/h5repack/h5repack.sh.in @@ -1391,7 +1391,12 @@ TOOLTEST add_alignment $arg TOOLTEST upgrade_layout h5repack_layouto.h5 # test for datum size > H5TOOLS_MALLOCSIZE -TOOLTEST gt_mallocsize h5repack_objs.h5 -f GZIP=1 +arg="h5repack_objs.h5 -f GZIP=1" +if test $USE_FILTER_DEFLATE != "yes" ; then + SKIP $arg +else + TOOLTEST gt_mallocsize $arg +fi # Check repacking file with committed datatypes in odd configurations TOOLTEST committed_dt h5repack_named_dtypes.h5 @@ -1462,7 +1467,7 @@ VERIFY_SUPERBLOCK 1 2 2 h5repack_layout.h5 -j 1 -k 2 h5repack_layout.h5 # -j 2 -k 2, superblock will be 3 VERIFY_SUPERBLOCK 2 2 3 h5repack_layout.h5 -j 2 -k 2 h5repack_layout.h5 # -j 0 -k 1, file cannot be opened -VERIFY_INVALIDBOUNDS 0 1 bounds_latest_latest.h5 +VERIFY_INVALIDBOUNDS 0 1 bounds_latest_latest.h5 # Clean up temporary files/directories CLEAN_TESTFILES_AND_TESTDIR |