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diff --git a/HDF5Examples/config/cmake/grepTest.cmake b/HDF5Examples/config/cmake/grepTest.cmake
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+#
+# Copyright by The HDF Group.
+# All rights reserved.
+#
+# This file is part of HDF5. The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the COPYING file, which can be found at the root of the source code
+# distribution tree, or in https://www.hdfgroup.org/licenses.
+# If you do not have access to either file, you may request a copy from
+# help@hdfgroup.org.
+#
+# grepTest.cmake executes a command and captures the output in a file. File is then compared
+# against a reference file. Exit status of command can also be compared.
+
+# arguments checking
+if (NOT TEST_PROGRAM)
+ message (FATAL_ERROR "Require TEST_PROGRAM to be defined")
+endif ()
+if (NOT TEST_FOLDER)
+ message (FATAL_ERROR "Require TEST_FOLDER to be defined")
+endif ()
+if (NOT TEST_OUTPUT)
+ message (FATAL_ERROR "Require TEST_OUTPUT to be defined")
+endif ()
+if (NOT TEST_FILTER)
+ message (STATUS "Optional TEST_FILTER to be defined")
+endif ()
+if (NOT TEST_REFERENCE)
+ message (FATAL_ERROR "Require TEST_REFERENCE to be defined")
+endif ()
+
+if (EXISTS "${TEST_FOLDER}/${TEST_OUTPUT}")
+ file (REMOVE ${TEST_FOLDER}/${TEST_OUTPUT})
+endif ()
+
+if (EXISTS "${TEST_FOLDER}/${TEST_OUTPUT}.err")
+ file (REMOVE ${TEST_FOLDER}/${TEST_OUTPUT}.err)
+endif ()
+
+message (STATUS "COMMAND: ${TEST_EMULATOR} ${TEST_PROGRAM} ${TEST_ARGS}")
+
+if (TEST_LIBRARY_DIRECTORY)
+ if (WIN32)
+ set (ENV{PATH} "$ENV{PATH};${TEST_LIBRARY_DIRECTORY}")
+ elseif (APPLE)
+ set (ENV{DYLD_LIBRARY_PATH} "$ENV{DYLD_LIBRARY_PATH}:${TEST_LIBRARY_DIRECTORY}")
+ else ()
+ set (ENV{LD_LIBRARY_PATH} "$ENV{LD_LIBRARY_PATH}:${TEST_LIBRARY_DIRECTORY}")
+ endif ()
+endif ()
+
+if (TEST_ENV_VAR)
+ set (ENV{${TEST_ENV_VAR}} "${TEST_ENV_VALUE}")
+ message (TRACE "ENV:${TEST_ENV_VAR}=$ENV{${TEST_ENV_VAR}}")
+endif ()
+
+# run the test program, capture the stdout/stderr and the result var
+execute_process (
+ COMMAND ${TEST_EMULATOR} ${TEST_PROGRAM} ${TEST_ARGS}
+ WORKING_DIRECTORY ${TEST_FOLDER}
+ RESULT_VARIABLE TEST_RESULT
+ OUTPUT_FILE ${TEST_OUTPUT}
+ ERROR_FILE ${TEST_OUTPUT}.err
+ OUTPUT_VARIABLE TEST_OUT
+ ERROR_VARIABLE TEST_ERROR
+)
+
+message (STATUS "COMMAND Result: ${TEST_RESULT}")
+
+message (STATUS "COMMAND Error: ${TEST_ERROR}")
+
+# remove special output
+file (READ ${TEST_FOLDER}/${TEST_OUTPUT} TEST_STREAM)
+string (FIND TEST_STREAM "_pmi_alps" TEST_FIND_RESULT)
+if (TEST_FIND_RESULT GREATER -1)
+ string (REGEX REPLACE "^.*_pmi_alps[^\n]+\n" "" TEST_STREAM "${TEST_STREAM}")
+ file (WRITE ${TEST_FOLDER}/${TEST_OUTPUT} ${TEST_STREAM})
+endif ()
+
+# if the TEST_ERRREF exists grep the error output with the error reference
+set (TEST_ERRREF_RESULT 0)
+if (TEST_ERRREF)
+ # if the .err file exists grep the error output with the error reference before comparing stdout
+ if (EXISTS "${TEST_FOLDER}/${TEST_OUTPUT}.err")
+ file (READ ${TEST_FOLDER}/${TEST_OUTPUT}.err TEST_ERR_STREAM)
+ list (LENGTH TEST_ERR_STREAM test_len)
+ if (test_len GREATER 0)
+ # TEST_ERRREF should always be matched
+ string (REGEX MATCH "${TEST_ERRREF}" TEST_MATCH ${TEST_ERR_STREAM})
+ string (COMPARE EQUAL "${TEST_ERRREF}" "${TEST_MATCH}" TEST_ERRREF_RESULT)
+ if (NOT TEST_ERRREF_RESULT)
+ message (FATAL_ERROR "Failed: The error output of ${TEST_PROGRAM} did not contain ${TEST_ERRREF}")
+ endif ()
+ endif ()
+ endif ()
+
+ #always compare output file to reference unless this must be skipped
+ set (TEST_COMPARE_RESULT 0)
+ if (NOT TEST_SKIP_COMPARE)
+ if (EXISTS "${TEST_FOLDER}/${TEST_REFERENCE}")
+ file (READ ${TEST_FOLDER}/${TEST_REFERENCE} TEST_STREAM)
+ list (LENGTH TEST_STREAM test_len)
+ if (test_len GREATER 0)
+ if (WIN32)
+ configure_file(${TEST_FOLDER}/${TEST_REFERENCE} ${TEST_FOLDER}/${TEST_REFERENCE}.tmp NEWLINE_STYLE CRLF)
+ if (EXISTS "${TEST_FOLDER}/${TEST_REFERENCE}.tmp")
+ file(RENAME ${TEST_FOLDER}/${TEST_REFERENCE}.tmp ${TEST_FOLDER}/${TEST_REFERENCE})
+ endif ()
+ #file (READ ${TEST_FOLDER}/${TEST_REFERENCE} TEST_STREAM)
+ #file (WRITE ${TEST_FOLDER}/${TEST_REFERENCE} "${TEST_STREAM}")
+ endif ()
+ if (NOT TEST_SORT_COMPARE)
+ # now compare the output with the reference
+ execute_process (
+ COMMAND ${CMAKE_COMMAND} -E compare_files --ignore-eol ${TEST_FOLDER}/${TEST_OUTPUT} ${TEST_FOLDER}/${TEST_REFERENCE}
+ RESULT_VARIABLE TEST_COMPARE_RESULT
+ )
+ else ()
+ file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} v1)
+ file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} v2)
+ list (SORT v1)
+ list (SORT v2)
+ if (NOT v1 STREQUAL v2)
+ set(TEST_COMPARE_RESULT 1)
+ endif ()
+ endif ()
+
+ if (TEST_COMPARE_RESULT)
+ set (TEST_COMPARE_RESULT 0)
+ file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} test_act)
+ list (LENGTH test_act len_act)
+ file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} test_ref)
+ list (LENGTH test_ref len_ref)
+ if (len_act GREATER 0 AND len_ref GREATER 0)
+ math (EXPR _FP_LEN "${len_ref} - 1")
+ foreach (line RANGE 0 ${_FP_LEN})
+ list (GET test_act ${line} str_act)
+ list (GET test_ref ${line} str_ref)
+ if (NOT str_act STREQUAL str_ref)
+ if (str_act)
+ set (TEST_COMPARE_RESULT 1)
+ message (STATUS "line = ${line}\n***ACTUAL: ${str_act}\n****REFER: ${str_ref}\n")
+ endif ()
+ endif ()
+ endforeach ()
+ else ()
+ if (len_act EQUAL 0)
+ message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_OUTPUT} is empty")
+ endif ()
+ if (len_ref EQUAL 0)
+ message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_REFERENCE} is empty")
+ endif ()
+ endif ()
+ if (NOT len_act EQUAL len_ref)
+ set (TEST_COMPARE_RESULT 1)
+ endif ()
+ endif ()
+ endif ()
+
+ message (STATUS "COMPARE Result: ${TEST_COMPARE_RESULT}")
+
+ # again, if return value is !=0 scream and shout
+ if (TEST_COMPARE_RESULT)
+ message (FATAL_ERROR "Failed: The output of ${TEST_OUTPUT} did not match ${TEST_REFERENCE}")
+ endif ()
+ endif ()
+ endif ()
+else ()
+ # else grep the output with the reference
+ set (TEST_GREP_RESULT 0)
+ file (READ ${TEST_FOLDER}/${TEST_OUTPUT} TEST_STREAM)
+ list (LENGTH TEST_STREAM test_len)
+ if (test_len GREATER 0)
+ # TEST_REFERENCE should always be matched
+ string (REGEX MATCH "${TEST_REFERENCE}" TEST_MATCH ${TEST_STREAM})
+ string (COMPARE EQUAL "${TEST_REFERENCE}" "${TEST_MATCH}" TEST_GREP_RESULT)
+ if (NOT TEST_GREP_RESULT)
+ message (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did not contain ${TEST_REFERENCE}")
+ endif ()
+ endif ()
+endif ()
+
+
+if (TEST_FILTER)
+ string (REGEX MATCH "${TEST_FILTER}" TEST_MATCH ${TEST_STREAM})
+ if (TEST_EXPECT)
+ # TEST_EXPECT (1) interprets TEST_FILTER as; NOT to match
+ string (LENGTH "${TEST_MATCH}" TEST_GREP_RESULT)
+ if (TEST_GREP_RESULT)
+ message (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did contain ${TEST_FILTER}")
+ endif ()
+ endif ()
+endif ()
+
+if (NOT DEFINED ENV{HDF5_NOCLEANUP})
+ if (EXISTS "${TEST_FOLDER}/${TEST_OUTPUT}")
+ file (REMOVE ${TEST_FOLDER}/${TEST_OUTPUT})
+ endif ()
+
+ if (EXISTS "${TEST_FOLDER}/${TEST_OUTPUT}.err")
+ file (REMOVE ${TEST_FOLDER}/${TEST_OUTPUT}.err)
+ endif ()
+
+ if (TEST_DELETE_LIST)
+ foreach (dfile in ${TEST_DELETE_LIST})
+ file (REMOVE ${dfile})
+ endforeach ()
+ endif ()
+endif ()
+
+# everything went fine...
+message (STATUS "Passed: The output of ${TEST_PROGRAM} matched")
+