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Diffstat (limited to 'c++/src/H5Location.h')
| -rw-r--r-- | c++/src/H5Location.h | 437 |
1 files changed, 299 insertions, 138 deletions
diff --git a/c++/src/H5Location.h b/c++/src/H5Location.h index 69f7ff3..ee45d67 100644 --- a/c++/src/H5Location.h +++ b/c++/src/H5Location.h @@ -1,180 +1,341 @@ // C++ informative line for the emacs editor: -*- C++ -*- /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * - * Copyright by the Board of Trustees of the University of Illinois. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * - * the files COPYING and Copyright.html. COPYING can be found at the root * - * of the source code distribution tree; Copyright.html can be found at the * - * root level of an installed copy of the electronic HDF5 document set and * - * is linked from the top-level documents page. It can also be found at * - * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have * - * access to either file, you may request a copy from help@hdfgroup.org. * + * the COPYING file, which can be found at the root of the source code * + * distribution tree, or in https://www.hdfgroup.org/licenses. * + * If you do not have access to either file, you may request a copy from * + * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#ifndef __H5Location_H -#define __H5Location_H +#ifndef H5Location_H +#define H5Location_H -#include "H5Classes.h" // constains forward class declarations +#include "H5Classes.h" // contains forward class declarations -#ifndef H5_NO_NAMESPACE namespace H5 { -#endif - -class H5_DLLCPP H5Location; // forward declaration for UserData4Aiterate - -// Define the operator function pointer for H5Aiterate(). -typedef void (*attr_operator_t)( H5Location& loc/*in*/, - const H5std_string attr_name/*in*/, - void *operator_data/*in,out*/); - -//! User data for attribute iteration -class UserData4Aiterate { - public: - attr_operator_t op; - void* opData; - H5Location* location; -}; /*! \class H5Location \brief H5Location is an abstract base class, added in version 1.8.12. It provides a collection of wrappers for the C functions that take a location identifier to specify the HDF5 object. The location identifier - can be either file, group, dataset, or named datatype. + can be either file, group, dataset, attribute, or named datatype. + Wrappers for H5A functions stay in H5Object. */ -// Most of these methods were in H5Object but are now moved here because -// a location can be a file, group, dataset, or named datatype. -BMR, 2013-10-1 +// Inheritance: IdComponent class H5_DLLCPP H5Location : public IdComponent { - public: - // Creates an attribute for the specified object at this location - // PropList is currently not used, so always be default. - Attribute createAttribute( const char* name, const DataType& type, const DataSpace& space, const PropList& create_plist = PropList::DEFAULT ) const; - Attribute createAttribute( const H5std_string& name, const DataType& type, const DataSpace& space, const PropList& create_plist = PropList::DEFAULT ) const; + public: + // Checks if a link of a given name exists in a location + bool nameExists(const char *name, const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + bool nameExists(const H5std_string &name, const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; - // Given its name, opens the attribute that belongs to an object at - // this location. - Attribute openAttribute( const char* name ) const; - Attribute openAttribute( const H5std_string& name ) const; + // Checks if a link of a given name exists in a location + // Deprecated in favor of nameExists for better name. + bool exists(const char *name, const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + bool exists(const H5std_string &name, const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; - // Given its index, opens the attribute that belongs to an object at - // this location. - Attribute openAttribute( const unsigned int idx ) const; + // Flushes all buffers associated with this location to disk. + void flush(H5F_scope_t scope) const; - // Flushes all buffers associated with this location to disk. - void flush( H5F_scope_t scope ) const; + // Gets the name of the file, specified by this location. + H5std_string getFileName() const; - // Gets the name of the file, specified by this location. - H5std_string getFileName() const; +#ifndef H5_NO_DEPRECATED_SYMBOLS + // Retrieves the type of object that an object reference points to. + H5G_obj_t getObjType(void *ref, H5R_type_t ref_type = H5R_OBJECT) const; +#endif /* H5_NO_DEPRECATED_SYMBOLS */ - // Determines the number of attributes at this location. - int getNumAttrs() const; + // Retrieves the type of object that an object reference points to. + H5O_type_t getRefObjType(void *ref, H5R_type_t ref_type = H5R_OBJECT) const; + // Note: getRefObjType deprecates getObjType, but getObjType's name is + // misleading, so getRefObjType is used in the new function instead. + + // Sets the comment for an HDF5 object specified by its name. + void setComment(const char *name, const char *comment) const; + void setComment(const H5std_string &name, const H5std_string &comment) const; + void setComment(const char *comment) const; + void setComment(const H5std_string &comment) const; + + // Retrieves comment for the HDF5 object specified by its name. + ssize_t getComment(const char *name, size_t buf_size, char *comment) const; + H5std_string getComment(const char *name, size_t buf_size = 0) const; + H5std_string getComment(const H5std_string &name, size_t buf_size = 0) const; + + // Removes the comment for the HDF5 object specified by its name. + void removeComment(const char *name) const; + void removeComment(const H5std_string &name) const; + + // Creates a reference to a named object or to a dataset region + // in this object. + void reference(void *ref, const char *name, H5R_type_t ref_type = H5R_OBJECT) const; + void reference(void *ref, const H5std_string &name, H5R_type_t ref_type = H5R_OBJECT) const; + void reference(void *ref, const char *name, const DataSpace &dataspace, + H5R_type_t ref_type = H5R_DATASET_REGION) const; + void reference(void *ref, const H5std_string &name, const DataSpace &dataspace, + H5R_type_t ref_type = H5R_DATASET_REGION) const; + + // Open a referenced object whose location is specified by either + // a file, an HDF5 object, or an attribute. + void dereference(const H5Location &loc, const void *ref, H5R_type_t ref_type = H5R_OBJECT, + const PropList &plist = PropList::DEFAULT); + // Removed in 1.10.1, because H5Location is baseclass + // void dereference(const Attribute& attr, const void* ref, H5R_type_t ref_type = H5R_OBJECT, const + // PropList& plist = PropList::DEFAULT); + + // Retrieves a dataspace with the region pointed to selected. + DataSpace getRegion(void *ref, H5R_type_t ref_type = H5R_DATASET_REGION) const; + + // Create a new group with using link create property list. + Group createGroup(const char *name, const LinkCreatPropList &lcpl) const; + Group createGroup(const H5std_string &name, const LinkCreatPropList &lcpl) const; + + // From CommonFG + // Creates a new group at this location which can be a file + // or another group. + Group createGroup(const char *name, size_t size_hint = 0) const; + Group createGroup(const H5std_string &name, size_t size_hint = 0) const; + + // Opens an existing group in a location which can be a file + // or another group. + Group openGroup(const char *name) const; + Group openGroup(const H5std_string &name) const; + + // Creates a new dataset in this location. + DataSet createDataSet(const char *name, const DataType &data_type, const DataSpace &data_space, + const DSetCreatPropList &create_plist = DSetCreatPropList::DEFAULT, + const DSetAccPropList &dapl = DSetAccPropList::DEFAULT, + const LinkCreatPropList &lcpl = LinkCreatPropList::DEFAULT) const; + DataSet createDataSet(const H5std_string &name, const DataType &data_type, const DataSpace &data_space, + const DSetCreatPropList &create_plist = DSetCreatPropList::DEFAULT, + const DSetAccPropList &dapl = DSetAccPropList::DEFAULT, + const LinkCreatPropList &lcpl = LinkCreatPropList::DEFAULT) const; + + // Deprecated to add LinkCreatPropList and DSetAccPropList - 1.10.3 + // DataSet createDataSet(const char* name, const DataType& data_type, const DataSpace& data_space, const + // DSetCreatPropList& create_plist = DSetCreatPropList::DEFAULT) const; DataSet createDataSet(const + // H5std_string& name, const DataType& data_type, const DataSpace& data_space, const DSetCreatPropList& + // create_plist = DSetCreatPropList::DEFAULT) const; + + // Opens an existing dataset at this location. + // DSetAccPropList is added - 1.10.3 + DataSet openDataSet(const char *name, const DSetAccPropList &dapl = DSetAccPropList::DEFAULT) const; + DataSet openDataSet(const H5std_string &name, + const DSetAccPropList &dapl = DSetAccPropList::DEFAULT) const; + + H5L_info2_t getLinkInfo(const char *link_name, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + H5L_info2_t getLinkInfo(const H5std_string &link_name, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + + // Returns the value of a symbolic link. + H5std_string getLinkval(const char *link_name, size_t size = 0) const; + H5std_string getLinkval(const H5std_string &link_name, size_t size = 0) const; + + // Returns the number of objects in this group. + // Deprecated - moved to H5::Group in 1.10.2. + hsize_t getNumObjs() const; + + // Retrieves the name of an object in this group, given the + // object's index. + H5std_string getObjnameByIdx(hsize_t idx) const; + ssize_t getObjnameByIdx(hsize_t idx, char *name, size_t size) const; + ssize_t getObjnameByIdx(hsize_t idx, H5std_string &name, size_t size) const; + + // Retrieves the type of an object in this file or group, given the + // object's name + H5O_type_t childObjType(const H5std_string &objname) const; + H5O_type_t childObjType(const char *objname) const; + H5O_type_t childObjType(hsize_t index, H5_index_t index_type = H5_INDEX_NAME, + H5_iter_order_t order = H5_ITER_INC, const char *objname = ".") const; + + // Returns the object header version of an object in this file or group, + // given the object's name. + unsigned childObjVersion(const char *objname) const; + unsigned childObjVersion(const H5std_string &objname) const; + + // Retrieves information about an HDF5 object. + void getObjinfo(H5O_info2_t &objinfo, unsigned fields = H5O_INFO_BASIC) const; + + // Retrieves information about an HDF5 object, given its name. + void getObjinfo(const char *name, H5O_info2_t &objinfo, unsigned fields = H5O_INFO_BASIC, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + void getObjinfo(const H5std_string &name, H5O_info2_t &objinfo, unsigned fields = H5O_INFO_BASIC, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + + // Retrieves information about an HDF5 object, given its index. + void getObjinfo(const char *grp_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t idx, + H5O_info2_t &objinfo, unsigned fields = H5O_INFO_BASIC, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + void getObjinfo(const H5std_string &grp_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t idx, + H5O_info2_t &objinfo, unsigned fields = H5O_INFO_BASIC, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + + // Retrieves native native information about an HDF5 object. + void getNativeObjinfo(H5O_native_info_t &objinfo, unsigned fields = H5O_NATIVE_INFO_HDR) const; + + // Retrieves native information about an HDF5 object, given its name. + void getNativeObjinfo(const char *name, H5O_native_info_t &objinfo, unsigned fields = H5O_NATIVE_INFO_HDR, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + void getNativeObjinfo(const H5std_string &name, H5O_native_info_t &objinfo, + unsigned fields = H5O_NATIVE_INFO_HDR, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + + // Retrieves native information about an HDF5 object, given its index. + void getNativeObjinfo(const char *grp_name, H5_index_t idx_type, H5_iter_order_t order, hsize_t idx, + H5O_native_info_t &objinfo, unsigned fields = H5O_NATIVE_INFO_HDR, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + void getNativeObjinfo(const H5std_string &grp_name, H5_index_t idx_type, H5_iter_order_t order, + hsize_t idx, H5O_native_info_t &objinfo, unsigned fields = H5O_NATIVE_INFO_HDR, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; #ifndef H5_NO_DEPRECATED_SYMBOLS - // Retrieves the type of object that an object reference points to. - H5G_obj_t getObjType(void *ref, H5R_type_t ref_type = H5R_OBJECT) const; + // Returns the type of an object in this group, given the + // object's index. + H5G_obj_t getObjTypeByIdx(hsize_t idx) const; + H5G_obj_t getObjTypeByIdx(hsize_t idx, char *type_name) const; + H5G_obj_t getObjTypeByIdx(hsize_t idx, H5std_string &type_name) const; + + // Returns information about an HDF5 object, given by its name, + // at this location. - Deprecated + void getObjinfo(const char *name, hbool_t follow_link, H5G_stat_t &statbuf) const; + void getObjinfo(const H5std_string &name, hbool_t follow_link, H5G_stat_t &statbuf) const; + void getObjinfo(const char *name, H5G_stat_t &statbuf) const; + void getObjinfo(const H5std_string &name, H5G_stat_t &statbuf) const; + + // Iterates over the elements of this group - not implemented in + // C++ style yet. + int iterateElems(const char *name, int *idx, H5G_iterate_t op, void *op_data); + int iterateElems(const H5std_string &name, int *idx, H5G_iterate_t op, void *op_data); #endif /* H5_NO_DEPRECATED_SYMBOLS */ - // Retrieves the type of object that an object reference points to. - H5O_type_t getRefObjType(void *ref, H5R_type_t ref_type = H5R_OBJECT) const; - // Note: getRefObjType deprecates getObjType, but getObjType's name is - // misleading, so getRefObjType is used in the new function instead. - - // Iterate user's function over the attributes at this location. - int iterateAttrs(attr_operator_t user_op, unsigned* idx = NULL, void* op_data = NULL); - - // Checks whether the named attribute exists at this location. - bool attrExists(const char* name) const; - bool attrExists(const H5std_string& name) const; - - // Renames the named attribute to a new name. - void renameAttr(const char* oldname, const char* newname) const; - void renameAttr(const H5std_string& oldname, const H5std_string& newname) const; - - // Removes the named attribute from this location. - void removeAttr(const char* name) const; - void removeAttr(const H5std_string& name) const; - - // Sets the comment for an HDF5 object specified by its name. - void setComment(const char* name, const char* comment) const; - void setComment(const H5std_string& name, const H5std_string& comment) const; - void setComment(const char* comment) const; - void setComment(const H5std_string& comment) const; - - // Retrieves comment for the HDF5 object specified by its name. - ssize_t getComment(const char* name, size_t buf_size, char* comment) const; - H5std_string getComment(const char* name, size_t buf_size=0) const; - H5std_string getComment(const H5std_string& name, size_t buf_size=0) const; - - // Removes the comment for the HDF5 object specified by its name. - void removeComment(const char* name) const; - void removeComment(const H5std_string& name) const; - - // Creates a reference to a named object or to a dataset region - // in this object. - void reference(void* ref, const char* name, - H5R_type_t ref_type = H5R_OBJECT) const; - void reference(void* ref, const H5std_string& name, - H5R_type_t ref_type = H5R_OBJECT) const; - void reference(void* ref, const char* name, const DataSpace& dataspace, - H5R_type_t ref_type = H5R_DATASET_REGION) const; - void reference(void* ref, const H5std_string& name, const DataSpace& dataspace, - H5R_type_t ref_type = H5R_DATASET_REGION) const; - - // Open a referenced object whose location is specified by either - // a file, an HDF5 object, or an attribute. - void dereference(const H5Location& loc, const void* ref, H5R_type_t ref_type = H5R_OBJECT, const PropList& plist = PropList::DEFAULT); - void dereference(const Attribute& attr, const void* ref, H5R_type_t ref_type = H5R_OBJECT, const PropList& plist = PropList::DEFAULT); - - // Retrieves a dataspace with the region pointed to selected. - DataSpace getRegion(void *ref, H5R_type_t ref_type = H5R_DATASET_REGION) const; - - ///\brief Returns an identifier. (pure virtual) - virtual hid_t getId() const = 0; - - protected: - // Default constructor - H5Location(); - + // Creates a soft link from link_name to target_name. + void link(const char *target_name, const char *link_name, + const LinkCreatPropList &lcpl = LinkCreatPropList::DEFAULT, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + void link(const H5std_string &target_name, const H5std_string &link_name, + const LinkCreatPropList &lcpl = LinkCreatPropList::DEFAULT, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + + // Creates a hard link from new_name to curr_name. + void link(const char *curr_name, const Group &new_loc, const char *new_name, + const LinkCreatPropList &lcpl = LinkCreatPropList::DEFAULT, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + void link(const H5std_string &curr_name, const Group &new_loc, const H5std_string &new_name, + const LinkCreatPropList &lcpl = LinkCreatPropList::DEFAULT, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + + // Creates a hard link from new_name to curr_name in same location. + void link(const char *curr_name, const hid_t same_loc, const char *new_name, + const LinkCreatPropList &lcpl = LinkCreatPropList::DEFAULT, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + void link(const H5std_string &curr_name, const hid_t same_loc, const H5std_string &new_name, + const LinkCreatPropList &lcpl = LinkCreatPropList::DEFAULT, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + + // Creates a link of the specified type from new_name to current_name; + // both names are interpreted relative to the specified location id. + // Deprecated due to inadequate functionality. + void link(H5L_type_t link_type, const char *curr_name, const char *new_name) const; + void link(H5L_type_t link_type, const H5std_string &curr_name, const H5std_string &new_name) const; + + // Removes the specified link from this location. + void unlink(const char *link_name, const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + void unlink(const H5std_string &link_name, const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + + // Mounts the file 'child' onto this location. + void mount(const char *name, const H5File &child, const PropList &plist) const; + void mount(const H5std_string &name, const H5File &child, const PropList &plist) const; + + // Unmounts the file named 'name' from this parent location. + void unmount(const char *name) const; + void unmount(const H5std_string &name) const; + + // Copies a link from a group to another. + void copyLink(const char *src_name, const Group &dst, const char *dst_name, + const LinkCreatPropList &lcpl = LinkCreatPropList::DEFAULT, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + void copyLink(const H5std_string &src_name, const Group &dst, const H5std_string &dst_name, + const LinkCreatPropList &lcpl = LinkCreatPropList::DEFAULT, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + + // Makes a copy of a link in the same group. + void copyLink(const char *src_name, const char *dst_name, + const LinkCreatPropList &lcpl = LinkCreatPropList::DEFAULT, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + void copyLink(const H5std_string &src_name, const H5std_string &dst_name, + const LinkCreatPropList &lcpl = LinkCreatPropList::DEFAULT, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + + // Renames a link in this group and moves to a new location. + void moveLink(const char *src_name, const Group &dst, const char *dst_name, + const LinkCreatPropList &lcpl = LinkCreatPropList::DEFAULT, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + void moveLink(const H5std_string &src_name, const Group &dst, const H5std_string &dst_name, + const LinkCreatPropList &lcpl = LinkCreatPropList::DEFAULT, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + + // Renames a link in this group. + void moveLink(const char *src_name, const char *dst_name, + const LinkCreatPropList &lcpl = LinkCreatPropList::DEFAULT, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + void moveLink(const H5std_string &src_name, const H5std_string &dst_name, + const LinkCreatPropList &lcpl = LinkCreatPropList::DEFAULT, + const LinkAccPropList &lapl = LinkAccPropList::DEFAULT) const; + + // Renames an object at this location. + // Deprecated due to inadequate functionality. + void move(const char *src, const char *dst) const; + void move(const H5std_string &src, const H5std_string &dst) const; + + // end From CommonFG + + /// For subclasses, H5File and Group, to throw appropriate exception. + virtual void throwException(const H5std_string &func_name, const H5std_string &msg) const; + + // Default constructor + H5Location(); + + protected: #ifndef DOXYGEN_SHOULD_SKIP_THIS + // *** Deprecation warning *** + // The following two constructors are no longer appropriate after the + // data member "id" had been moved to the sub-classes. + // The copy constructor is a noop and is removed in 1.8.15 and the + // other will be removed from 1.10 release, and then from 1.8 if its + // removal does not raise any problems in two 1.10 releases. - // *** Deprecation warning *** - // The following two constructors are no longer appropriate after the - // data member "id" had been moved to the sub-classes. - // The copy constructor is a noop and is removed in 1.8.15 and the - // other will be removed from 1.10 release, and then from 1.8 if its - // removal does not raise any problems in two 1.10 releases. - - // Creates a copy of an existing object giving the location id. - H5Location(const hid_t loc_id); + // Creates a copy of an existing object giving the location id. + // H5Location(const hid_t loc_id); - // Copy constructor. - // H5Location(const H5Location& original); + // Creates a reference to an HDF5 object or a dataset region. + void p_reference(void *ref, const char *name, hid_t space_id, H5R_type_t ref_type) const; - // Creates a reference to an HDF5 object or a dataset region. - void p_reference(void* ref, const char* name, hid_t space_id, H5R_type_t ref_type) const; - - // Dereferences a ref into an HDF5 id. - hid_t p_dereference(hid_t loc_id, const void* ref, H5R_type_t ref_type, const PropList& plist, const char* from_func); + // Dereferences a ref into an HDF5 id. + hid_t p_dereference(hid_t loc_id, const void *ref, H5R_type_t ref_type, const PropList &plist, + const char *from_func); #ifndef H5_NO_DEPRECATED_SYMBOLS - // Retrieves the type of object that an object reference points to. - H5G_obj_t p_get_obj_type(void *ref, H5R_type_t ref_type) const; + // Retrieves the type of object that an object reference points to. + H5G_obj_t p_get_obj_type(void *ref, H5R_type_t ref_type) const; #endif /* H5_NO_DEPRECATED_SYMBOLS */ - // Retrieves the type of object that an object reference points to. - H5O_type_t p_get_ref_obj_type(void *ref, H5R_type_t ref_type) const; + // Retrieves the type of object that an object reference points to. + H5O_type_t p_get_ref_obj_type(void *ref, H5R_type_t ref_type) const; + + // Sets the identifier of this object to a new value. - this one + // doesn't increment reference count + // virtual void p_setId(const hid_t new_id); #endif // DOXYGEN_SHOULD_SKIP_THIS - // Noop destructor. - virtual ~H5Location(); + // Noop destructor. + virtual ~H5Location() override; -}; /* end class H5Location */ +}; // end of H5Location +} // namespace H5 -#ifndef H5_NO_NAMESPACE -} -#endif -#endif // __H5Location_H +#endif // H5Location_H |