diff options
Diffstat (limited to 'config/cmake')
| -rw-r--r-- | config/cmake/ConfigureChecks.cmake | 10 | ||||
| -rw-r--r-- | config/cmake/FindMPI.cmake | 364 |
2 files changed, 373 insertions, 1 deletions
diff --git a/config/cmake/ConfigureChecks.cmake b/config/cmake/ConfigureChecks.cmake index 8b3e9be..3a16856 100644 --- a/config/cmake/ConfigureChecks.cmake +++ b/config/cmake/ConfigureChecks.cmake @@ -17,7 +17,15 @@ MESSAGE (STATUS " GetConsoleScreenBufferInfo function for Windows") # Always SET this for now IF we are on an OS X box #----------------------------------------------------------------------------- IF (APPLE) - SET (H5_AC_APPLE_UNIVERSAL_BUILD 1) + LIST(LENGTH CMAKE_OSX_ARCHITECTURES ARCH_LENGTH) + IF(ARCH_LENGTH GREATER 1) + set (CMAKE_OSX_ARCHITECTURES "" CACHE STRING "" FORCE) + message(FATAL_ERROR "Building Universal Binaries on OS X is NOT supported by the HDF5 project. This is" + "due to technical reasons. The best approach would be build each architecture in separate directories" + "and use the 'lipo' tool to combine them into a single executable or library. The 'CMAKE_OSX_ARCHITECTURES'" + "variable has been set to a blank value which will build the default architecture for this system.") + ENDIF() + SET (H5_AC_APPLE_UNIVERSAL_BUILD 0) ENDIF (APPLE) #----------------------------------------------------------------------------- diff --git a/config/cmake/FindMPI.cmake b/config/cmake/FindMPI.cmake new file mode 100644 index 0000000..555d2d5 --- /dev/null +++ b/config/cmake/FindMPI.cmake @@ -0,0 +1,364 @@ +# - Message Passing Interface (MPI) module. +# +# The Message Passing Interface (MPI) is a library used to write +# high-performance parallel applications that use message passing, and +# is typically deployed on a cluster. MPI is a standard interface +# (defined by the MPI forum) for which many implementations are +# available. All of these implementations have somewhat different +# compilation approaches (different include paths, libraries to link +# against, etc.), and this module tries to smooth out those differences. +# +# This module will set the following variables: +# MPI_FOUND TRUE if we have found MPI +# MPI_COMPILE_FLAGS Compilation flags for MPI programs +# MPI_INCLUDE_PATH Include path(s) for MPI header +# MPI_LINK_FLAGS Linking flags for MPI programs +# MPI_LIBRARY First MPI library to link against (cached) +# MPI_EXTRA_LIBRARY Extra MPI libraries to link against (cached) +# MPI_LIBRARIES All libraries to link MPI programs against +# MPIEXEC Executable for running MPI programs +# MPIEXEC_NUMPROC_FLAG Flag to pass to MPIEXEC before giving it the +# number of processors to run on +# MPIEXEC_PREFLAGS Flags to pass to MPIEXEC directly before the +# executable to run. +# MPIEXEC_POSTFLAGS Flags to pass to MPIEXEC after all other flags. +# +# This module will attempt to auto-detect these settings, first by +# looking for a MPI compiler, which many MPI implementations provide +# as a pass-through to the native compiler to simplify the compilation +# of MPI programs. The MPI compiler is stored in the cache variable +# MPI_COMPILER, and will attempt to look for commonly-named drivers +# mpic++, mpicxx, mpiCC, or mpicc. If the compiler driver is found and +# recognized, it will be used to set all of the module variables. To +# skip this auto-detection, set MPI_LIBRARY and MPI_INCLUDE_PATH in +# the CMake cache. +# +# If no compiler driver is found or the compiler driver is not +# recognized, this module will then search for common include paths +# and library names to try to detect MPI. +# +# If CMake initially finds a different MPI than was intended, and you +# want to use the MPI compiler auto-detection for a different MPI +# implementation, set MPI_COMPILER to the MPI compiler driver you want +# to use (e.g., mpicxx) and then set MPI_LIBRARY to the string +# MPI_LIBRARY-NOTFOUND. When you re-configure, auto-detection of MPI +# will run again with the newly-specified MPI_COMPILER. +# +# When using MPIEXEC to execute MPI applications, you should typically +# use all of the MPIEXEC flags as follows: +# ${MPIEXEC} ${MPIEXEC_NUMPROC_FLAG} PROCS ${MPIEXEC_PREFLAGS} EXECUTABLE +# ${MPIEXEC_POSTFLAGS} ARGS +# where PROCS is the number of processors on which to execute the program, +# EXECUTABLE is the MPI program, and ARGS are the arguments to pass to the +# MPI program. + +#============================================================================= +# Copyright 2001-2009 Kitware, Inc. +# +# Distributed under the OSI-approved BSD License (the "License"); +# see accompanying file Copyright.txt for details. +# +# This software is distributed WITHOUT ANY WARRANTY; without even the +# implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. +# See the License for more information. +#============================================================================= +# (To distributed this file outside of CMake, substitute the full +# License text for the above reference.) + +# This module is maintained by David Partyka <dave.partyka@kitware.com>. + +# A set of directories to search through in addition to the standard system paths +# that find_program will search through. +# Microsoft HPC SDK is automatically added to the system path +# Argonne National Labs MPICH2 sets a registry key that we can use. + +set(_MPI_PACKAGE_DIR + mpi + mpich + openmpi + lib/mpi + lib/mpich + lib/openmpi + "MPICH/SDK" + "Microsoft Compute Cluster Pack" + ) + +set(_MPI_PREFIX_PATH) +if(WIN32) + list(APPEND _MPI_PREFIX_PATH "[HKEY_LOCAL_MACHINE\\SOFTWARE\\MPICH\\SMPD;binary]/..") + list(APPEND _MPI_PREFIX_PATH "[HKEY_LOCAL_MACHINE\\SOFTWARE\\MPICH2;Path]") +endif() + +foreach(SystemPrefixDir ${CMAKE_SYSTEM_PREFIX_PATH}) + foreach(MpiPackageDir ${_MPI_PREFIX_PATH}) + if(EXISTS ${SystemPrefixDir}/${MpiPackageDir}) + list(APPEND _MPI_PREFIX_PATH "${SystemPrefixDir}/${MpiPackageDir}") + endif() + endforeach(MpiPackageDir) +endforeach(SystemPrefixDir) + +# Most mpi distros have some form of mpiexec which gives us something we can reliably look for. +find_program(MPIEXEC + NAMES mpiexec mpirun lamexec + PATHS ${_MPI_PREFIX_PATH} + PATH_SUFFIXES bin + DOC "Executable for running MPI programs." + ) + +# call get_filename_component twice to remove mpiexec and the directory it exists in (typically bin). +# This gives us a fairly reliable base directory to search for /bin /lib and /include from. +get_filename_component(_MPI_BASE_DIR "${MPIEXEC}" PATH) +get_filename_component(_MPI_BASE_DIR "${_MPI_BASE_DIR}" PATH) + +# If there is an mpi compiler find it and interogate (farther below) it for the include +# and lib dirs otherwise we will continue to search from ${_MPI_BASE_DIR}. +find_program(MPI_COMPILER + NAMES mpiCC mpicc mpic++ mpicxx + HINTS "${_MPI_BASE_DIR}" + PATH_SUFFIXES bin + DOC "MPI compiler. Used only to detect MPI compilation flags.") +mark_as_advanced(MPI_COMPILER) + +set(MPIEXEC_NUMPROC_FLAG "-np" CACHE STRING "Flag used by MPI to specify the number of processes for MPIEXEC; the next option will be the number of processes.") +set(MPIEXEC_PREFLAGS "" CACHE STRING "These flags will be directly before the executable that is being run by MPIEXEC.") +set(MPIEXEC_POSTFLAGS "" CACHE STRING "These flags will come after all flags given to MPIEXEC.") +set(MPIEXEC_MAX_NUMPROCS "2" CACHE STRING "Maximum number of processors available to run MPI applications.") +mark_as_advanced(MPIEXEC MPIEXEC_NUMPROC_FLAG MPIEXEC_PREFLAGS + MPIEXEC_POSTFLAGS MPIEXEC_MAX_NUMPROCS) + +if (MPI_INCLUDE_PATH AND MPI_LIBRARY) + # Do nothing: we already have MPI_INCLUDE_PATH and MPI_LIBRARY in + # the cache, and we don't want to override those settings. +elseif (MPI_COMPILER) + # Check whether the -showme:compile option works. This indicates + # that we have either Open MPI or a newer version of LAM-MPI, and + # implies that -showme:link will also work. + # Note that Windows distros do not have an mpi compiler to interogate. + exec_program(${MPI_COMPILER} + ARGS -showme:compile + OUTPUT_VARIABLE MPI_COMPILE_CMDLINE + RETURN_VALUE MPI_COMPILER_RETURN) + + if (MPI_COMPILER_RETURN EQUAL 0) + # If we appear to have -showme:compile, then we should also have + # -showme:link. Try it. + exec_program(${MPI_COMPILER} + ARGS -showme:link + OUTPUT_VARIABLE MPI_LINK_CMDLINE + RETURN_VALUE MPI_COMPILER_RETURN) + + # Note that we probably have -showme:incdirs and -showme:libdirs + # as well. + set(MPI_COMPILER_MAY_HAVE_INCLIBDIRS TRUE) + endif (MPI_COMPILER_RETURN EQUAL 0) + + if (MPI_COMPILER_RETURN EQUAL 0) + # Do nothing: we have our command lines now + else (MPI_COMPILER_RETURN EQUAL 0) + # Older versions of LAM-MPI have "-showme". Try it. + exec_program(${MPI_COMPILER} + ARGS -showme + OUTPUT_VARIABLE MPI_COMPILE_CMDLINE + RETURN_VALUE MPI_COMPILER_RETURN) + endif (MPI_COMPILER_RETURN EQUAL 0) + + if (MPI_COMPILER_RETURN EQUAL 0) + # Do nothing: we have our command lines now + else (MPI_COMPILER_RETURN EQUAL 0) + # MPICH uses "-show". Try it. + exec_program(${MPI_COMPILER} + ARGS -show + OUTPUT_VARIABLE MPI_COMPILE_CMDLINE + RETURN_VALUE MPI_COMPILER_RETURN) + endif (MPI_COMPILER_RETURN EQUAL 0) + + if (MPI_COMPILER_RETURN EQUAL 0) + # We have our command lines, but we might need to copy + # MPI_COMPILE_CMDLINE into MPI_LINK_CMDLINE, if the underlying + if (NOT MPI_LINK_CMDLINE) + SET(MPI_LINK_CMDLINE ${MPI_COMPILE_CMDLINE}) + endif (NOT MPI_LINK_CMDLINE) + else (MPI_COMPILER_RETURN EQUAL 0) + message(STATUS "Unable to determine MPI from MPI driver ${MPI_COMPILER}") + endif (MPI_COMPILER_RETURN EQUAL 0) +endif (MPI_INCLUDE_PATH AND MPI_LIBRARY) + +if (MPI_INCLUDE_PATH AND MPI_LIBRARY) + # Do nothing: we already have MPI_INCLUDE_PATH and MPI_LIBRARY in + # the cache, and we don't want to override those settings. +elseif (MPI_COMPILE_CMDLINE) + # Extract compile flags from the compile command line. + string(REGEX MATCHALL "-D([^\" ]+|\"[^\"]+\")" MPI_ALL_COMPILE_FLAGS "${MPI_COMPILE_CMDLINE}") + set(MPI_COMPILE_FLAGS_WORK) + foreach(FLAG ${MPI_ALL_COMPILE_FLAGS}) + if (MPI_COMPILE_FLAGS_WORK) + set(MPI_COMPILE_FLAGS_WORK "${MPI_COMPILE_FLAGS_WORK} ${FLAG}") + else(MPI_COMPILE_FLAGS_WORK) + set(MPI_COMPILE_FLAGS_WORK ${FLAG}) + endif(MPI_COMPILE_FLAGS_WORK) + endforeach(FLAG) + + # Extract include paths from compile command line + string(REGEX MATCHALL "-I([^\" ]+|\"[^\"]+\")" MPI_ALL_INCLUDE_PATHS "${MPI_COMPILE_CMDLINE}") + set(MPI_INCLUDE_PATH_WORK) + foreach(IPATH ${MPI_ALL_INCLUDE_PATHS}) + string(REGEX REPLACE "^-I" "" IPATH ${IPATH}) + string(REGEX REPLACE "//" "/" IPATH ${IPATH}) + list(APPEND MPI_INCLUDE_PATH_WORK ${IPATH}) + endforeach(IPATH) + + if (NOT MPI_INCLUDE_PATH_WORK) + if (MPI_COMPILER_MAY_HAVE_INCLIBDIRS) + # The compile command line didn't have any include paths on it, + # but we may have -showme:incdirs. Use it. + exec_program(${MPI_COMPILER} + ARGS -showme:incdirs + OUTPUT_VARIABLE MPI_INCLUDE_PATH_WORK + RETURN_VALUE MPI_COMPILER_RETURN) + separate_arguments(MPI_INCLUDE_PATH_WORK) + endif (MPI_COMPILER_MAY_HAVE_INCLIBDIRS) + endif (NOT MPI_INCLUDE_PATH_WORK) + + if (NOT MPI_INCLUDE_PATH_WORK) + # If all else fails, just search for mpi.h in the normal include + # paths. + find_path(MPI_INCLUDE_PATH mpi.h + HINTS ${_MPI_BASE_DIR} ${_MPI_PREFIX_PATH} + PATH_SUFFIXES include + ) + set(MPI_INCLUDE_PATH_WORK ${MPI_INCLUDE_PATH}) + endif (NOT MPI_INCLUDE_PATH_WORK) + + # Extract linker paths from the link command line + string(REGEX MATCHALL "-L([^\" ]+|\"[^\"]+\")" MPI_ALL_LINK_PATHS "${MPI_LINK_CMDLINE}") + set(MPI_LINK_PATH) + foreach(LPATH ${MPI_ALL_LINK_PATHS}) + string(REGEX REPLACE "^-L" "" LPATH ${LPATH}) + string(REGEX REPLACE "//" "/" LPATH ${LPATH}) + list(APPEND MPI_LINK_PATH ${LPATH}) + endforeach(LPATH) + + if (NOT MPI_LINK_PATH) + if (MPI_COMPILER_MAY_HAVE_INCLIBDIRS) + # The compile command line didn't have any linking paths on it, + # but we may have -showme:libdirs. Use it. + exec_program(${MPI_COMPILER} + ARGS -showme:libdirs + OUTPUT_VARIABLE MPI_LINK_PATH + RETURN_VALUE MPI_COMPILER_RETURN) + separate_arguments(MPI_LINK_PATH) + endif (MPI_COMPILER_MAY_HAVE_INCLIBDIRS) + endif (NOT MPI_LINK_PATH) + + # Extract linker flags from the link command line + string(REGEX MATCHALL "-Wl,([^\" ]+|\"[^\"]+\")" MPI_ALL_LINK_FLAGS "${MPI_LINK_CMDLINE}") + set(MPI_LINK_FLAGS_WORK) + foreach(FLAG ${MPI_ALL_LINK_FLAGS}) + if (MPI_LINK_FLAGS_WORK) + set(MPI_LINK_FLAGS_WORK "${MPI_LINK_FLAGS_WORK} ${FLAG}") + else(MPI_LINK_FLAGS_WORK) + set(MPI_LINK_FLAGS_WORK ${FLAG}) + endif(MPI_LINK_FLAGS_WORK) + endforeach(FLAG) + + # Extract the set of libraries to link against from the link command + # line + string(REGEX MATCHALL "-l([^\" ]+|\"[^\"]+\")" MPI_LIBNAMES "${MPI_LINK_CMDLINE}") + + # Determine full path names for all of the libraries that one needs + # to link against in an MPI program + set(MPI_LIBRARIES) + foreach(LIB ${MPI_LIBNAMES}) + string(REGEX REPLACE "^-l" "" LIB ${LIB}) + set(MPI_LIB "MPI_LIB-NOTFOUND" CACHE FILEPATH "Cleared" FORCE) + find_library(MPI_LIB ${LIB} HINTS ${MPI_LINK_PATH}) + if (MPI_LIB) + list(APPEND MPI_LIBRARIES ${MPI_LIB}) + else (MPI_LIB) + message(SEND_ERROR "Unable to find MPI library ${LIB}") + endif (MPI_LIB) + endforeach(LIB) + set(MPI_LIB "MPI_LIB-NOTFOUND" CACHE INTERNAL "Scratch variable for MPI detection" FORCE) + + # Chop MPI_LIBRARIES into the old-style MPI_LIBRARY and + # MPI_EXTRA_LIBRARY. + list(LENGTH MPI_LIBRARIES MPI_NUMLIBS) + list(LENGTH MPI_LIBNAMES MPI_NUMLIBS_EXPECTED) + if (MPI_NUMLIBS EQUAL MPI_NUMLIBS_EXPECTED) + list(GET MPI_LIBRARIES 0 MPI_LIBRARY_WORK) + set(MPI_LIBRARY ${MPI_LIBRARY_WORK} CACHE FILEPATH "MPI library to link against" FORCE) + else (MPI_NUMLIBS EQUAL MPI_NUMLIBS_EXPECTED) + set(MPI_LIBRARY "MPI_LIBRARY-NOTFOUND" CACHE FILEPATH "MPI library to link against" FORCE) + endif (MPI_NUMLIBS EQUAL MPI_NUMLIBS_EXPECTED) + if (MPI_NUMLIBS GREATER 1) + set(MPI_EXTRA_LIBRARY_WORK ${MPI_LIBRARIES}) + list(REMOVE_AT MPI_EXTRA_LIBRARY_WORK 0) + set(MPI_EXTRA_LIBRARY ${MPI_EXTRA_LIBRARY_WORK} CACHE STRING "Extra MPI libraries to link against" FORCE) + else (MPI_NUMLIBS GREATER 1) + set(MPI_EXTRA_LIBRARY "MPI_EXTRA_LIBRARY-NOTFOUND" CACHE STRING "Extra MPI libraries to link against" FORCE) + endif (MPI_NUMLIBS GREATER 1) + + # Set up all of the appropriate cache entries + set(MPI_COMPILE_FLAGS ${MPI_COMPILE_FLAGS_WORK} CACHE STRING "MPI compilation flags" FORCE) + set(MPI_INCLUDE_PATH ${MPI_INCLUDE_PATH_WORK} CACHE STRING "MPI include path" FORCE) + set(MPI_LINK_FLAGS ${MPI_LINK_FLAGS_WORK} CACHE STRING "MPI linking flags" FORCE) +else (MPI_COMPILE_CMDLINE) +# No MPI compiler to interogate so attempt to find everything with find functions. + find_path(MPI_INCLUDE_PATH mpi.h + HINTS ${_MPI_BASE_DIR} ${_MPI_PREFIX_PATH} + PATH_SUFFIXES include + ) + + # Decide between 32-bit and 64-bit libraries for Microsoft's MPI + if("${CMAKE_SIZEOF_VOID_P}" EQUAL 8) + set(MS_MPI_ARCH_DIR amd64) + else() + set(MS_MPI_ARCH_DIR i386) + endif() + + find_library(MPI_LIBRARY + NAMES mpi mpich msmpi + HINTS ${_MPI_BASE_DIR} ${_MPI_PREFIX_PATH} + PATH_SUFFIXES lib lib/${MS_MPI_ARCH_DIR} Lib Lib/${MS_MPI_ARCH_DIR} + ) + + find_library(MPI_EXTRA_LIBRARY + NAMES mpi++ + HINTS ${_MPI_BASE_DIR} ${_MPI_PREFIX_PATH} + PATH_SUFFIXES lib + DOC "Extra MPI libraries to link against.") + + set(MPI_COMPILE_FLAGS "" CACHE STRING "MPI compilation flags") + set(MPI_LINK_FLAGS "" CACHE STRING "MPI linking flags") +endif (MPI_INCLUDE_PATH AND MPI_LIBRARY) + +# on BlueGene/L the MPI lib is named libmpich.rts.a, there also these additional libs are required +if("${MPI_LIBRARY}" MATCHES "mpich.rts") + set(MPI_EXTRA_LIBRARY ${MPI_EXTRA_LIBRARY} msglayer.rts devices.rts rts.rts devices.rts) + set(MPI_LIBRARY ${MPI_LIBRARY} msglayer.rts devices.rts rts.rts devices.rts) +endif("${MPI_LIBRARY}" MATCHES "mpich.rts") + +# Set up extra variables to conform to +if (MPI_EXTRA_LIBRARY) + set(MPI_LIBRARIES ${MPI_LIBRARY} ${MPI_EXTRA_LIBRARY}) +else (MPI_EXTRA_LIBRARY) + set(MPI_LIBRARIES ${MPI_LIBRARY}) +endif (MPI_EXTRA_LIBRARY) + +if (MPI_INCLUDE_PATH AND MPI_LIBRARY) + set(MPI_FOUND TRUE) +else (MPI_INCLUDE_PATH AND MPI_LIBRARY) + set(MPI_FOUND FALSE) +endif (MPI_INCLUDE_PATH AND MPI_LIBRARY) + +include(FindPackageHandleStandardArgs) +# handle the QUIETLY and REQUIRED arguments +find_package_handle_standard_args(MPI DEFAULT_MSG MPI_LIBRARY MPI_INCLUDE_PATH) + +mark_as_advanced(MPI_INCLUDE_PATH MPI_COMPILE_FLAGS MPI_LINK_FLAGS MPI_LIBRARY + MPI_EXTRA_LIBRARY) + +# unset to cleanup namespace +unset(_MPI_PACKAGE_DIR) +unset(_MPI_PREFIX_PATH) +unset(_MPI_BASE_DIR) |