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-rwxr-xr-xconfigure2138
1 files changed, 356 insertions, 1782 deletions
diff --git a/configure b/configure
index e229b06..de1641c 100755
--- a/configure
+++ b/configure
@@ -1,7 +1,7 @@
#! /bin/sh
# From configure.ac Id: configure.ac 22697 2012-08-19 14:35:47Z hdftest .
# Guess values for system-dependent variables and create Makefiles.
-# Generated by GNU Autoconf 2.69 for HDF5 1.9.212.
+# Generated by GNU Autoconf 2.69 for HDF5 1.9.215.
#
# Report bugs to <help@hdfgroup.org>.
#
@@ -591,8 +591,8 @@ MAKEFLAGS=
# Identity of this package.
PACKAGE_NAME='HDF5'
PACKAGE_TARNAME='hdf5'
-PACKAGE_VERSION='1.9.212'
-PACKAGE_STRING='HDF5 1.9.212'
+PACKAGE_VERSION='1.9.215'
+PACKAGE_STRING='HDF5 1.9.215'
PACKAGE_BUGREPORT='help@hdfgroup.org'
PACKAGE_URL=''
@@ -655,8 +655,6 @@ DEFAULT_API_VERSION
DEPRECATED_SYMBOLS
BUILD_ALL_CONDITIONAL_FALSE
BUILD_ALL_CONDITIONAL_TRUE
-HL_FOR
-HL
DYNAMIC_DIRS
ROOT
CXX_VERSION
@@ -728,6 +726,8 @@ TIME
TR
AR
PERL
+HL_FOR
+HL
CXXCPP
am__fastdepCXX_FALSE
am__fastdepCXX_TRUE
@@ -787,7 +787,6 @@ DIRECT_VFD
HAVE_DMALLOC
CODESTACK
INSTRUMENT
-LARGEFILE
HDF5_HL
CXX
HDF_CXX
@@ -895,6 +894,7 @@ enable_unsupported
enable_fortran
enable_fortran2003
enable_cxx
+enable_hl
enable_shared
enable_static
with_pic
@@ -905,7 +905,6 @@ enable_libtool_lock
enable_static_exec
enable_sharedlib_rpath
enable_production
-enable_largefile
with_fnord
with_dmalloc
with_zlib
@@ -922,12 +921,10 @@ enable_using_memchecker
enable_parallel
with_mpe
enable_filters
-with_default_vfd
enable_direct_vfd
with_default_plugindir
enable_dconv_exception
enable_dconv_accuracy
-enable_hl
enable_build_all
enable_deprecated_symbols
with_default_api_version
@@ -1489,7 +1486,7 @@ if test "$ac_init_help" = "long"; then
# Omit some internal or obsolete options to make the list less imposing.
# This message is too long to be a string in the A/UX 3.1 sh.
cat <<_ACEOF
-\`configure' configures HDF5 1.9.212 to adapt to many kinds of systems.
+\`configure' configures HDF5 1.9.215 to adapt to many kinds of systems.
Usage: $0 [OPTION]... [VAR=VALUE]...
@@ -1559,7 +1556,7 @@ fi
if test -n "$ac_init_help"; then
case $ac_init_help in
- short | recursive ) echo "Configuration of HDF5 1.9.212:";;
+ short | recursive ) echo "Configuration of HDF5 1.9.215:";;
esac
cat <<\_ACEOF
@@ -1577,10 +1574,11 @@ Optional Features:
--disable-dependency-tracking
speeds up one-time build
--enable-unsupported Allow unsupported combinations of configure options
- --enable-fortran Compile the Fortran 77/90/95 interface [default=no]
+ --enable-fortran Compile the Fortran 90/95 interface [default=no]
--enable-fortran2003 Compile the Fortran 2003 interface, must also
specify --enable-fortran [default=no]
--enable-cxx Compile the C++ interface [default=no]
+ --enable-hl Enable the high-level library [default=yes]
--enable-shared[=PKGS] build shared libraries [default=yes]
--enable-static[=PKGS] build static libraries [default=yes]
--enable-fast-install[=PKGS]
@@ -1591,7 +1589,6 @@ Optional Features:
--disable-sharedlib-rpath
Disable use of the '=Wl,-rpath' linker option
--enable-production Determines how to run the compiler.
- --disable-largefile omit support for large files
--enable-threadsafe Enable thread-safe capability
--enable-debug=all Turn on debugging in all packages. One may also
specify a comma-separated list of package names
@@ -1619,14 +1616,14 @@ Optional Features:
--enable-filters=all Turn on all internal I/O filters. One may also
specify a comma-separated list of filters or the
word no. The default is all internal I/O filters.
- --enable-direct-vfd Build the Direct I/O Virtual File Driver
- [default=yes]
+ --enable-direct-vfd Build the direct I/O virtual file driver (VFD). This
+ is based on the POSIX (sec2) VFD and requires the
+ open() call to take the O_DIRECT flag. [default=no]
--enable-dconv-exception
if exception handling functions is checked during
data conversions [default=yes]
--enable-dconv-accuracy if data accuracy is guaranteed during data
conversions [default=yes]
- --enable-hl Enable the high level library [default=yes]
--enable-build-all Build helper programs that only developers should
need [default=no]
--enable-deprecated-symbols
@@ -1662,8 +1659,6 @@ Optional Packages:
--with-pthread=DIR Specify alternative path to Pthreads library when
thread-safe capability is built
--with-mpe=DIR Use MPE instrumentation [default=no]
- --with-default-vfd=driver
- Specify default file driver [default=sec2]
--with-default-plugindir=location
Specify default location for plugins
[default="/usr/local/hdf5/lib/plugin"]
@@ -1752,7 +1747,7 @@ fi
test -n "$ac_init_help" && exit $ac_status
if $ac_init_version; then
cat <<\_ACEOF
-HDF5 configure 1.9.212
+HDF5 configure 1.9.215
generated by GNU Autoconf 2.69
Copyright (C) 2012 Free Software Foundation, Inc.
@@ -1888,13 +1883,13 @@ fi
} # ac_fn_c_try_link
-# ac_fn_fc_try_run LINENO
-# -----------------------
-# Try to link conftest.$ac_ext, and return whether this succeeded. Assumes
-# that executables *can* be run.
-ac_fn_fc_try_run ()
+# ac_fn_fc_try_link LINENO
+# ------------------------
+# Try to link conftest.$ac_ext, and return whether this succeeded.
+ac_fn_fc_try_link ()
{
as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ rm -f conftest.$ac_objext conftest$ac_exeext
if { { ac_try="$ac_link"
case "(($ac_try" in
*\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
@@ -1902,33 +1897,37 @@ case "(($ac_try" in
esac
eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
$as_echo "$ac_try_echo"; } >&5
- (eval "$ac_link") 2>&5
- ac_status=$?
- $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
- test $ac_status = 0; } && { ac_try='./conftest$ac_exeext'
- { { case "(($ac_try" in
- *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
- *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
-$as_echo "$ac_try_echo"; } >&5
- (eval "$ac_try") 2>&5
+ (eval "$ac_link") 2>conftest.err
ac_status=$?
+ if test -s conftest.err; then
+ grep -v '^ *+' conftest.err >conftest.er1
+ cat conftest.er1 >&5
+ mv -f conftest.er1 conftest.err
+ fi
$as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
- test $ac_status = 0; }; }; then :
+ test $ac_status = 0; } && {
+ test -z "$ac_fc_werror_flag" ||
+ test ! -s conftest.err
+ } && test -s conftest$ac_exeext && {
+ test "$cross_compiling" = yes ||
+ test -x conftest$ac_exeext
+ }; then :
ac_retval=0
else
- $as_echo "$as_me: program exited with status $ac_status" >&5
- $as_echo "$as_me: failed program was:" >&5
+ $as_echo "$as_me: failed program was:" >&5
sed 's/^/| /' conftest.$ac_ext >&5
- ac_retval=$ac_status
+ ac_retval=1
fi
+ # Delete the IPA/IPO (Inter Procedural Analysis/Optimization) information
+ # created by the PGI compiler (conftest_ipa8_conftest.oo), as it would
+ # interfere with the next link command; also delete a directory that is
+ # left behind by Apple's compiler. We do this before executing the actions.
rm -rf conftest.dSYM conftest_ipa8_conftest.oo
eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
as_fn_set_status $ac_retval
-} # ac_fn_fc_try_run
+} # ac_fn_fc_try_link
# ac_fn_cxx_try_compile LINENO
# ----------------------------
@@ -2005,13 +2004,13 @@ fi
} # ac_fn_cxx_try_cpp
-# ac_fn_cxx_try_run LINENO
-# ------------------------
-# Try to link conftest.$ac_ext, and return whether this succeeded. Assumes
-# that executables *can* be run.
-ac_fn_cxx_try_run ()
+# ac_fn_cxx_try_link LINENO
+# -------------------------
+# Try to link conftest.$ac_ext, and return whether this succeeded.
+ac_fn_cxx_try_link ()
{
as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
+ rm -f conftest.$ac_objext conftest$ac_exeext
if { { ac_try="$ac_link"
case "(($ac_try" in
*\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
@@ -2019,33 +2018,37 @@ case "(($ac_try" in
esac
eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
$as_echo "$ac_try_echo"; } >&5
- (eval "$ac_link") 2>&5
- ac_status=$?
- $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
- test $ac_status = 0; } && { ac_try='./conftest$ac_exeext'
- { { case "(($ac_try" in
- *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
- *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
-$as_echo "$ac_try_echo"; } >&5
- (eval "$ac_try") 2>&5
+ (eval "$ac_link") 2>conftest.err
ac_status=$?
+ if test -s conftest.err; then
+ grep -v '^ *+' conftest.err >conftest.er1
+ cat conftest.er1 >&5
+ mv -f conftest.er1 conftest.err
+ fi
$as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
- test $ac_status = 0; }; }; then :
+ test $ac_status = 0; } && {
+ test -z "$ac_cxx_werror_flag" ||
+ test ! -s conftest.err
+ } && test -s conftest$ac_exeext && {
+ test "$cross_compiling" = yes ||
+ test -x conftest$ac_exeext
+ }; then :
ac_retval=0
else
- $as_echo "$as_me: program exited with status $ac_status" >&5
- $as_echo "$as_me: failed program was:" >&5
+ $as_echo "$as_me: failed program was:" >&5
sed 's/^/| /' conftest.$ac_ext >&5
- ac_retval=$ac_status
+ ac_retval=1
fi
+ # Delete the IPA/IPO (Inter Procedural Analysis/Optimization) information
+ # created by the PGI compiler (conftest_ipa8_conftest.oo), as it would
+ # interfere with the next link command; also delete a directory that is
+ # left behind by Apple's compiler. We do this before executing the actions.
rm -rf conftest.dSYM conftest_ipa8_conftest.oo
eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
as_fn_set_status $ac_retval
-} # ac_fn_cxx_try_run
+} # ac_fn_cxx_try_link
# ac_fn_c_check_header_compile LINENO HEADER VAR INCLUDES
# -------------------------------------------------------
@@ -2232,98 +2235,6 @@ $as_echo "$ac_res" >&6; }
} # ac_fn_c_check_func
-# ac_fn_cxx_try_link LINENO
-# -------------------------
-# Try to link conftest.$ac_ext, and return whether this succeeded.
-ac_fn_cxx_try_link ()
-{
- as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
- rm -f conftest.$ac_objext conftest$ac_exeext
- if { { ac_try="$ac_link"
-case "(($ac_try" in
- *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
- *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
-$as_echo "$ac_try_echo"; } >&5
- (eval "$ac_link") 2>conftest.err
- ac_status=$?
- if test -s conftest.err; then
- grep -v '^ *+' conftest.err >conftest.er1
- cat conftest.er1 >&5
- mv -f conftest.er1 conftest.err
- fi
- $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
- test $ac_status = 0; } && {
- test -z "$ac_cxx_werror_flag" ||
- test ! -s conftest.err
- } && test -s conftest$ac_exeext && {
- test "$cross_compiling" = yes ||
- test -x conftest$ac_exeext
- }; then :
- ac_retval=0
-else
- $as_echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- ac_retval=1
-fi
- # Delete the IPA/IPO (Inter Procedural Analysis/Optimization) information
- # created by the PGI compiler (conftest_ipa8_conftest.oo), as it would
- # interfere with the next link command; also delete a directory that is
- # left behind by Apple's compiler. We do this before executing the actions.
- rm -rf conftest.dSYM conftest_ipa8_conftest.oo
- eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
- as_fn_set_status $ac_retval
-
-} # ac_fn_cxx_try_link
-
-# ac_fn_fc_try_link LINENO
-# ------------------------
-# Try to link conftest.$ac_ext, and return whether this succeeded.
-ac_fn_fc_try_link ()
-{
- as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
- rm -f conftest.$ac_objext conftest$ac_exeext
- if { { ac_try="$ac_link"
-case "(($ac_try" in
- *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
- *) ac_try_echo=$ac_try;;
-esac
-eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
-$as_echo "$ac_try_echo"; } >&5
- (eval "$ac_link") 2>conftest.err
- ac_status=$?
- if test -s conftest.err; then
- grep -v '^ *+' conftest.err >conftest.er1
- cat conftest.er1 >&5
- mv -f conftest.er1 conftest.err
- fi
- $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
- test $ac_status = 0; } && {
- test -z "$ac_fc_werror_flag" ||
- test ! -s conftest.err
- } && test -s conftest$ac_exeext && {
- test "$cross_compiling" = yes ||
- test -x conftest$ac_exeext
- }; then :
- ac_retval=0
-else
- $as_echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- ac_retval=1
-fi
- # Delete the IPA/IPO (Inter Procedural Analysis/Optimization) information
- # created by the PGI compiler (conftest_ipa8_conftest.oo), as it would
- # interfere with the next link command; also delete a directory that is
- # left behind by Apple's compiler. We do this before executing the actions.
- rm -rf conftest.dSYM conftest_ipa8_conftest.oo
- eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
- as_fn_set_status $ac_retval
-
-} # ac_fn_fc_try_link
-
# ac_fn_c_check_header_mongrel LINENO HEADER VAR INCLUDES
# -------------------------------------------------------
# Tests whether HEADER exists, giving a warning if it cannot be compiled using
@@ -2769,84 +2680,11 @@ $as_echo "$ac_res" >&6; }
eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
} # ac_fn_c_check_decl
-
-# ac_fn_c_check_member LINENO AGGR MEMBER VAR INCLUDES
-# ----------------------------------------------------
-# Tries to find if the field MEMBER exists in type AGGR, after including
-# INCLUDES, setting cache variable VAR accordingly.
-ac_fn_c_check_member ()
-{
- as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2.$3" >&5
-$as_echo_n "checking for $2.$3... " >&6; }
-if eval \${$4+:} false; then :
- $as_echo_n "(cached) " >&6
-else
- cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-$5
-#ifdef FC_DUMMY_MAIN
-#ifndef FC_DUMMY_MAIN_EQ_F77
-# ifdef __cplusplus
- extern "C"
-# endif
- int FC_DUMMY_MAIN() { return 1; }
-#endif
-#endif
-int
-main ()
-{
-static $2 ac_aggr;
-if (ac_aggr.$3)
-return 0;
- ;
- return 0;
-}
-_ACEOF
-if ac_fn_c_try_compile "$LINENO"; then :
- eval "$4=yes"
-else
- cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-$5
-#ifdef FC_DUMMY_MAIN
-#ifndef FC_DUMMY_MAIN_EQ_F77
-# ifdef __cplusplus
- extern "C"
-# endif
- int FC_DUMMY_MAIN() { return 1; }
-#endif
-#endif
-int
-main ()
-{
-static $2 ac_aggr;
-if (sizeof ac_aggr.$3)
-return 0;
- ;
- return 0;
-}
-_ACEOF
-if ac_fn_c_try_compile "$LINENO"; then :
- eval "$4=yes"
-else
- eval "$4=no"
-fi
-rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-eval ac_res=\$$4
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
-$as_echo "$ac_res" >&6; }
- eval $as_lineno_stack; ${as_lineno_stack:+:} unset as_lineno
-
-} # ac_fn_c_check_member
cat >config.log <<_ACEOF
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
-It was created by HDF5 $as_me 1.9.212, which was
+It was created by HDF5 $as_me 1.9.215, which was
generated by GNU Autoconf 2.69. Invocation command line was
$ $0 $@
@@ -3717,7 +3555,7 @@ fi
# Define the identity of the package.
PACKAGE='hdf5'
- VERSION='1.9.212'
+ VERSION='1.9.215'
cat >>confdefs.h <<_ACEOF
@@ -4050,7 +3888,6 @@ $as_echo "done" >&6; }
## HDF_CXX: whether C++ is enabled. Default no.
## CXX: C++ compiler.
## HDF5_HL: whether high-level library is enabled. Default is yes.
-## LARGEFILE: whether largefile support is enabled. Default yes.
## INSTRUMENT: whether INSTRUMENT is enabled. No default set here.
## CODESTACK: whether CODESTACK is enabled. Default no.
## HAVE_DMALLOC: whether system has dmalloc support. Default no.
@@ -4071,7 +3908,6 @@ $as_echo "done" >&6; }
HDF_CXX=no
HDF_CXX=no
HDF5_HL=yes
- LARGEFILE=yes
CODESTACK=no
HAVE_DMALLOC=no
@@ -5353,14 +5189,13 @@ if test "X$HDF_FORTRAN2003" = "Xyes" && test "X$HDF_FORTRAN" = "Xno"; then
echo "no"
as_fn_error $? "--enable-fortran must be used with --enable-fortran2003" "$LINENO" 5
else
- echo "yes"
+ if test "X$HDF_FORTRAN2003" = "Xyes" && test "X$HDF_FORTRAN" = "Xyes"; then
+ echo "yes"
+ else
+ echo "no"
+ fi
fi
-HAVE_SIZEOF="no"
-HAVE_C_SIZEOF="no"
-HAVE_STORAGE_SIZE="no"
-FORTRAN_DEFAULT_REALisDBLE="no"
-
if test "X$HDF_FORTRAN" = "Xyes"; then
HDF_FORTRAN=yes
@@ -5369,12 +5204,6 @@ if test "X$HDF_FORTRAN" = "Xyes"; then
HDF5_INTERFACES="$HDF5_INTERFACES fortran"
## --------------------------------------------------------------------
- ## Default for FORTRAN 2003 compliant compilers
- ##
- HAVE_FORTRAN_2003="no"
- HAVE_F2003_REQUIREMENTS="no"
-
- ## --------------------------------------------------------------------
## HDF5 integer variables for the H5fortran_types.f90 file.
##
@@ -5660,14 +5489,14 @@ ac_compiler_gnu=$ac_cv_c_compiler_gnu
## --------------------------------------------------------------------
- ## Check for a Fortran 9X compiler and how to include modules.
+ ## Check for a Fortran compiler and how to include modules.
##
ac_ext=${ac_fc_srcext-f}
ac_compile='$FC -c $FCFLAGS $ac_fcflags_srcext conftest.$ac_ext >&5'
ac_link='$FC -o conftest$ac_exeext $FCFLAGS $LDFLAGS $ac_fcflags_srcext conftest.$ac_ext $LIBS >&5'
ac_compiler_gnu=$ac_cv_fc_compiler_gnu
if test -n "$ac_tool_prefix"; then
- for ac_prog in f90 pgf90 slf90 f95 g95 xlf95 efc ifort ftn
+ for ac_prog in gfortran ifort pgf90 pathf90 pathf95 xlf90 xlf95 xlf2003 f90 epcf90 f95 fort lf95 g95 ifc efc gfc
do
# Extract the first word of "$ac_tool_prefix$ac_prog", so it can be a program name with args.
set dummy $ac_tool_prefix$ac_prog; ac_word=$2
@@ -5711,7 +5540,7 @@ fi
fi
if test -z "$FC"; then
ac_ct_FC=$FC
- for ac_prog in f90 pgf90 slf90 f95 g95 xlf95 efc ifort ftn
+ for ac_prog in gfortran ifort pgf90 pathf90 pathf95 xlf90 xlf95 xlf2003 f90 epcf90 f95 fort lf95 g95 ifc efc gfc
do
# Extract the first word of "$ac_prog", so it can be a program name with args.
set dummy $ac_prog; ac_word=$2
@@ -5965,11 +5794,6 @@ ac_compiler_gnu=$ac_cv_c_compiler_gnu
- ## It seems that libtool (as of Libtool 1.5.14) is trying to
- ## configure itself for Fortran 77.
- ## Tell it that our F77 compiler is $FC (actually a F9X compiler)
- F77=$FC
-
## Change to the Fortran 90 language
ac_ext=${ac_fc_srcext-f}
ac_compile='$FC -c $FCFLAGS $ac_fcflags_srcext conftest.$ac_ext >&5'
@@ -6663,21 +6487,11 @@ ac_compiler_gnu=$ac_cv_fc_compiler_gnu
## --------------------------------------------------------------------
- ## See if the compiler will support the "-I." option
- ##
-
-
- ## --------------------------------------------------------------------
## See if the fortran compiler supports the intrinsic function "SIZEOF"
+ HAVE_SIZEOF_FORTRAN="no"
{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if Fortran compiler supports intrinsic SIZEOF" >&5
$as_echo_n "checking if Fortran compiler supports intrinsic SIZEOF... " >&6; }
- if test "$cross_compiling" = yes; then :
- { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
-$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
-as_fn_error $? "cannot run test program while cross compiling
-See \`config.log' for more details" "$LINENO" 5; }
-else
cat > conftest.$ac_ext <<_ACEOF
PROGRAM main
@@ -6685,29 +6499,23 @@ else
END PROGRAM
_ACEOF
-if ac_fn_fc_try_run "$LINENO"; then :
+if ac_fn_fc_try_link "$LINENO"; then :
{ $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
$as_echo "yes" >&6; }
- HAVE_SIZEOF="yes"
+ HAVE_SIZEOF_FORTRAN="yes"
else
{ $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
$as_echo "no" >&6; }
fi
-rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
- conftest.$ac_objext conftest.beam conftest.$ac_ext
-fi
+rm -f core conftest.err conftest.$ac_objext \
+ conftest$ac_exeext conftest.$ac_ext
## See if the fortran compiler supports the intrinsic function "C_SIZEOF"
+ HAVE_C_SIZEOF_FORTRAN="no"
{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if Fortran compiler supports intrinsic C_SIZEOF" >&5
$as_echo_n "checking if Fortran compiler supports intrinsic C_SIZEOF... " >&6; }
- if test "$cross_compiling" = yes; then :
- { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
-$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
-as_fn_error $? "cannot run test program while cross compiling
-See \`config.log' for more details" "$LINENO" 5; }
-else
cat > conftest.$ac_ext <<_ACEOF
PROGRAM main
@@ -6718,29 +6526,23 @@ else
END PROGRAM
_ACEOF
-if ac_fn_fc_try_run "$LINENO"; then :
+if ac_fn_fc_try_link "$LINENO"; then :
{ $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
$as_echo "yes" >&6; }
- HAVE_C_SIZEOF="yes"
+ HAVE_C_SIZEOF_FORTRAN="yes"
else
{ $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
$as_echo "no" >&6; }
fi
-rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
- conftest.$ac_objext conftest.beam conftest.$ac_ext
-fi
+rm -f core conftest.err conftest.$ac_objext \
+ conftest$ac_exeext conftest.$ac_ext
## See if the fortran compiler supports the intrinsic function "STORAGE_SIZE"
+ HAVE_STORAGE_SIZE_FORTRAN="no"
{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if Fortran compiler supports intrinsic STORAGE_SIZE" >&5
$as_echo_n "checking if Fortran compiler supports intrinsic STORAGE_SIZE... " >&6; }
- if test "$cross_compiling" = yes; then :
- { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
-$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
-as_fn_error $? "cannot run test program while cross compiling
-See \`config.log' for more details" "$LINENO" 5; }
-else
cat > conftest.$ac_ext <<_ACEOF
PROGRAM main
@@ -6750,31 +6552,26 @@ else
END PROGRAM
_ACEOF
-if ac_fn_fc_try_run "$LINENO"; then :
+if ac_fn_fc_try_link "$LINENO"; then :
{ $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
$as_echo "yes" >&6; }
- HAVE_STORAGE_SIZE="yes"
+ HAVE_STORAGE_SIZE_FORTRAN="yes"
else
{ $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
$as_echo "no" >&6; }
fi
-rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
- conftest.$ac_objext conftest.beam conftest.$ac_ext
-fi
+rm -f core conftest.err conftest.$ac_objext \
+ conftest$ac_exeext conftest.$ac_ext
+
## Check to see if -r8 was specified to determine if we need to
## compile the DOUBLE PRECISION interfaces.
+ FORTRAN_DEFAULT_REALisDBLE="no"
{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if Fortran default REAL is DOUBLE PRECISION" >&5
$as_echo_n "checking if Fortran default REAL is DOUBLE PRECISION... " >&6; }
- if test "$cross_compiling" = yes; then :
- { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
-$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
-as_fn_error $? "cannot run test program while cross compiling
-See \`config.log' for more details" "$LINENO" 5; }
-else
cat > conftest.$ac_ext <<_ACEOF
MODULE type_mod
@@ -6799,17 +6596,15 @@ else
END PROGRAM main
_ACEOF
-if ac_fn_fc_try_run "$LINENO"; then :
+if ac_fn_fc_try_compile "$LINENO"; then :
{ $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
$as_echo "no" >&6; }
else
{ $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
$as_echo "yes" >&6; }
- FORTRAN_DEFAULT_REALisDBLE="yes"
-fi
-rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
- conftest.$ac_objext conftest.beam conftest.$ac_ext
+ FORTRAN_DEFAULT_REALisDBLE="yes"
fi
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
if test "X$HDF_FORTRAN2003" = "Xyes"; then
@@ -6817,26 +6612,26 @@ fi
## Checking if the compiler supports the required Fortran 2003 features and
## disable Fortran 2003 if it does not.
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking if Fortran compiler version compatible with Fortran 2003 HDF" >&5
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking if Fortran compiler version compatible with Fortran 2003 HDF" >&5
$as_echo_n "checking if Fortran compiler version compatible with Fortran 2003 HDF... " >&6; }
HAVE_FORTRAN_2003="no"
-
+ HAVE_F2003_REQUIREMENTS="no"
cat > conftest.$ac_ext <<_ACEOF
program main
- USE iso_c_binding
- IMPLICIT NONE
- TYPE(C_PTR) :: ptr
- TYPE(C_FUNPTR) :: funptr
- CHARACTER(LEN=80, KIND=c_char), TARGET :: ichr
+ USE iso_c_binding
+ IMPLICIT NONE
+ TYPE(C_PTR) :: ptr
+ TYPE(C_FUNPTR) :: funptr
+ CHARACTER(LEN=80, KIND=c_char), TARGET :: ichr
- ptr = C_LOC(ichr(1:1))
+ ptr = C_LOC(ichr(1:1))
end
_ACEOF
-if ac_fn_fc_try_compile "$LINENO"; then :
+if ac_fn_fc_try_link "$LINENO"; then :
{ $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
$as_echo "yes" >&6; }
HAVE_F2003_REQUIREMENTS=yes
@@ -6844,12 +6639,13 @@ else
{ $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
$as_echo "no" >&6; }
fi
-rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+rm -f core conftest.err conftest.$ac_objext \
+ conftest$ac_exeext conftest.$ac_ext
+
+
if test "X$HAVE_F2003_REQUIREMENTS" = "Xno"; then
- ## echo $HAVE_FORTRAN_2003
as_fn_error $? "Fortran compiler lacks required Fortran 2003 features; unsupported Fortran 2003 compiler, remove --enable-fortran2003" "$LINENO" 5
else
- ## echo $HAVE_FORTRAN_2003
HAVE_FORTRAN_2003="yes"
fi
fi
@@ -6865,7 +6661,7 @@ ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $
ac_compiler_gnu=$ac_cv_c_compiler_gnu
- if test "X$HAVE_SIZEOF" = "Xyes"; then
+ if test "X$HAVE_SIZEOF_FORTRAN" = "Xyes"; then
FORTRAN_HAVE_SIZEOF_TRUE=
FORTRAN_HAVE_SIZEOF_FALSE='#'
else
@@ -6873,7 +6669,7 @@ else
FORTRAN_HAVE_SIZEOF_FALSE=
fi
- if test "X$HAVE_C_SIZEOF" = "Xyes"; then
+ if test "X$HAVE_C_SIZEOF_FORTRAN" = "Xyes"; then
FORTRAN_HAVE_C_SIZEOF_TRUE=
FORTRAN_HAVE_C_SIZEOF_FALSE='#'
else
@@ -6881,7 +6677,7 @@ else
FORTRAN_HAVE_C_SIZEOF_FALSE=
fi
- if test "X$HAVE_STORAGE_SIZE" = "Xyes"; then
+ if test "X$HAVE_STORAGE_SIZE_FORTRAN" = "Xyes"; then
FORTRAN_HAVE_STORAGE_SIZE_TRUE=
FORTRAN_HAVE_STORAGE_SIZE_FALSE='#'
else
@@ -6906,8 +6702,6 @@ else
fi
-
-
## ----------------------------------------------------------------------
## Check if they would like the C++ interface compiled
##
@@ -7486,15 +7280,11 @@ ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ex
ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
+ # Checking if C++ needs old style header files in includes
+
+
{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if $CXX needs old style header files in includes" >&5
$as_echo_n "checking if $CXX needs old style header files in includes... " >&6; }
-
-if test "$cross_compiling" = yes; then :
- { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
-$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
-as_fn_error $? "cannot run test program while cross compiling
-See \`config.log' for more details" "$LINENO" 5; }
-else
cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
@@ -7503,30 +7293,23 @@ else
int main(void) { return 0; }
_ACEOF
-if ac_fn_cxx_try_run "$LINENO"; then :
-
- echo no
-
+if ac_fn_cxx_try_link "$LINENO"; then :
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
else
-
- echo yes
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
+$as_echo "yes" >&6; }
CXXFLAGS="${CXXFLAGS} -DOLD_HEADER_FILENAME"
AM_CXXFLAGS="${AM_CXXFLAGS} -DOLD_HEADER_FILENAME"
-
-fi
-rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
- conftest.$ac_objext conftest.beam conftest.$ac_ext
fi
+rm -f core conftest.err conftest.$ac_objext \
+ conftest$ac_exeext conftest.$ac_ext
+
+ # Checking if C++ can handle namespaces
{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if $CXX can handle namespaces" >&5
$as_echo_n "checking if $CXX can handle namespaces... " >&6; }
- if test "$cross_compiling" = yes; then :
- { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
-$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
-as_fn_error $? "cannot run test program while cross compiling
-See \`config.log' for more details" "$LINENO" 5; }
-else
cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
@@ -7541,91 +7324,20 @@ int main(void) {
}
_ACEOF
-if ac_fn_cxx_try_run "$LINENO"; then :
-
- echo yes
-
+if ac_fn_cxx_try_link "$LINENO"; then :
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
+$as_echo "yes" >&6; }
else
-
- echo no
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
CXXFLAGS="${CXXFLAGS} -DH5_NO_NAMESPACE"
AM_CXXFLAGS="${AM_CXXFLAGS} -DH5_NO_NAMESPACE"
-
fi
-rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
- conftest.$ac_objext conftest.beam conftest.$ac_ext
-fi
-
-
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking if $CXX supports std" >&5
-$as_echo_n "checking if $CXX supports std... " >&6; }
- if test "$cross_compiling" = yes; then :
- { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
-$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
-as_fn_error $? "cannot run test program while cross compiling
-See \`config.log' for more details" "$LINENO" 5; }
-else
- cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-
-#include <string>
-
-using namespace std;
-
-int main(void) {
- string myString("testing namespace std");
- return 0;
-}
-
-_ACEOF
-if ac_fn_cxx_try_run "$LINENO"; then :
-
- echo yes
-
-else
-
- echo no
- CXXFLAGS="${CXXFLAGS} -DH5_NO_STD"
- AM_CXXFLAGS="${AM_CXXFLAGS} -DH5_NO_STD"
-
-fi
-rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
- conftest.$ac_objext conftest.beam conftest.$ac_ext
-fi
-
-
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking if $CXX supports bool types" >&5
-$as_echo_n "checking if $CXX supports bool types... " >&6; }
- if test "$cross_compiling" = yes; then :
- { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
-$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
-as_fn_error $? "cannot run test program while cross compiling
-See \`config.log' for more details" "$LINENO" 5; }
-else
- cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-
-int main(void) {
- bool flag;
- return 0;
-}
-
-_ACEOF
-if ac_fn_cxx_try_run "$LINENO"; then :
-
- echo yes
-
-else
-
- echo no
- CXXFLAGS="${CXXFLAGS} -DBOOL_NOTDEFINED"
- AM_CXXFLAGS="${AM_CXXFLAGS} -DBOOL_NOTDEFINED"
+rm -f core conftest.err conftest.$ac_objext \
+ conftest$ac_exeext conftest.$ac_ext
-fi
-rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
- conftest.$ac_objext conftest.beam conftest.$ac_ext
-fi
+ # Checking if C++ has offsetof extension
{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if $CXX has offsetof extension" >&5
$as_echo_n "checking if $CXX has offsetof extension... " >&6; }
@@ -7662,26 +7374,24 @@ main ()
return 0;
}
_ACEOF
-if ac_fn_cxx_try_compile "$LINENO"; then :
+if ac_fn_cxx_try_link "$LINENO"; then :
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
+$as_echo "yes" >&6; }
$as_echo "#define CXX_HAVE_OFFSETOF 1" >>confdefs.h
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
-$as_echo "yes" >&6; }
else
{ $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
$as_echo "no" >&6; }
fi
-rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+rm -f core conftest.err conftest.$ac_objext \
+ conftest$ac_exeext conftest.$ac_ext
+
+
+ # if C++ can handle static cast
{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if $CXX can handle static cast" >&5
$as_echo_n "checking if $CXX can handle static cast... " >&6; }
- if test "$cross_compiling" = yes; then :
- { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
-$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
-as_fn_error $? "cannot run test program while cross compiling
-See \`config.log' for more details" "$LINENO" 5; }
-else
cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
@@ -7694,23 +7404,22 @@ int main(void) {
}
_ACEOF
-if ac_fn_cxx_try_run "$LINENO"; then :
-
- echo yes
-
+if ac_fn_cxx_try_link "$LINENO"; then :
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
+$as_echo "yes" >&6; }
else
-
- echo no
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
CXXFLAGS="${CXXFLAGS} -DNO_STATIC_CAST"
AM_CXXFLAGS="${AM_CXXFLAGS} -DNO_STATIC_CAST"
-
-fi
-rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
- conftest.$ac_objext conftest.beam conftest.$ac_ext
fi
+rm -f core conftest.err conftest.$ac_objext \
+ conftest$ac_exeext conftest.$ac_ext
+
else
- echo "no"
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
CXX="no"
fi
@@ -7722,6 +7431,41 @@ ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $
ac_compiler_gnu=$ac_cv_c_compiler_gnu
+
+## ----------------------------------------------------------------------
+## Check if they would like the High Level library compiled
+##
+
+ HL=""
+## name of fortran folder inside "hl", if FORTRAN compile is requested
+ HL_FOR=""
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if high level library is enabled" >&5
+$as_echo_n "checking if high level library is enabled... " >&6; }
+# Check whether --enable-hl was given.
+if test "${enable_hl+set}" = set; then :
+ enableval=$enable_hl; HDF5_HL=$enableval
+else
+ HDF5_HL=yes
+fi
+
+
+if test "X$HDF5_HL" = "Xyes"; then
+ echo "yes"
+ HL="hl"
+
+$as_echo "#define INCLUDE_HL 1" >>confdefs.h
+
+
+ ## If Fortran's default real is double precision and HL is being built then configure
+ ## should fail due to bug HDFFV-889.
+ if test "X$FORTRAN_DEFAULT_REALisDBLE" = "Xyes"; then
+ as_fn_error $? "Fortran high-level routines are not supported when the default REAL is DOUBLE PRECISION, use configure option --disable-hl." "$LINENO" 5
+ fi
+else
+ echo "no"
+fi
+
+
## ----------------------------------------------------------------------
## Check if they have Perl installed on their system. We only need Perl
## if they're using a GNU compiler.
@@ -7772,7 +7516,6 @@ done
fi
-
## ----------------------------------------------------------------------
## Check which archiving tool to use. This needs to be done before
## the AM_PROG_LIBTOOL macro.
@@ -7864,8 +7607,7 @@ fi
## ----------------------------------------------------------------------
-## Check that the tr utility is working properly.
-
+## Set up ${TR} which is used to process DEBUG_PKG.
# Extract the first word of "tr", so it can be a program name with args.
set dummy tr; ac_word=$2
{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
@@ -7907,16 +7649,16 @@ fi
-TR_TEST=`echo Test | ${TR} ${as_cr_letters}"," ${as_cr_LETTERS}" "`
-if test "X${TR_TEST}" != "XTEST"; then
- as_fn_error $? "tr program doesn't work" "$LINENO" 5
-fi
-
## ----------------------------------------------------------------------
## Check that time can be used with srcdir. This is okay on most systems,
## but seems to cause problems on Cygwin.
## The solution on Cygwin is not to record execution time for tests.
+##
+## Note: This is still true as of Cygwin 1.7.32 (Aug 2014) on both 32-
+## and 64-bit platforms. Given how long this has been true, it seems
+## unlikely to change, but we should probably re-test this periodically.
+
{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if srcdir= and time commands work together" >&5
$as_echo_n "checking if srcdir= and time commands work together... " >&6; }
@@ -7941,16 +7683,14 @@ fi
## a parallel library even if configure wasn't
## able to find some header file or library that
## might be required. This is defined if the
-## compiler looks like a parallel compiler (e.g.,
-## mpicc or mpcc) or if the user explicitly states
+## user explicitly states
## that a parallel library is being built by supplying
## the `--enable-parallel' configure switch.
##
## PARALLEL -- This variable is set to a non-null value if
-## configure thinks we're compiling a parallel
-## version of the library.
+## we're building a parallel version of the library.
##
-## RUNSERIAL -- This is a command which will be prepended to
+## RUNSERIAL -- This is a command which will be prepended to
## the executable name to run the executable using
## a single process. For serial versions of the
## library this will normally be empty. For parallel
@@ -7976,146 +7716,6 @@ fi
## ----------------------------------------------------------------------
-## If the compiler is obviously a parallel compiler then we're building
-## a parallel version of hdf5 and should define HAVE_PARALLEL. Furthermore,
-## the name of the compiler might tell us how to run the resulting
-## executable. For `mpicc' the executable should be run with `mpiexec' from
-## the same directory as mpicc if it exists.
-##
-case "$CC_BASENAME" in
- mpicc)
- ## The mpich compiler. Use mpiexec from the same directory if it
- ## exists.
- PARALLEL=mpicc
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for mpiexec" >&5
-$as_echo_n "checking for mpiexec... " >&6; }
-
- ## Find the path where mpicc is located.
- cmd="`echo $CC | cut -f1 -d' '`"
- if (echo $cmd | grep / >/dev/null); then
- path="`echo $cmd | sed 's/\(.*\)\/.*$/\1/'`"
- else
- for path in `echo $PATH | ${TR} ":" " "`; do
- if test -x $path/$cmd; then
- break
- fi
- done
- fi
-
- ## Is there an mpiexec at that path?
- if test -x $path/mpiexec; then
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: $path/mpiexec" >&5
-$as_echo "$path/mpiexec" >&6; }
- RUNSERIAL="${RUNSERIAL:-none}"
-
- if test -z "$RUNPARALLEL"; then
- RUNPARALLEL="$path/mpiexec -n \$\${NPROCS:=6}"
- fi
- else
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: none" >&5
-$as_echo "none" >&6; }
- fi
- ;;
-
- mpcc|mpcc_r)
- ## The IBM compiler
- PARALLEL="$CC_BASENAME"
- ;;
-
- *)
- ## Probably not a parallel compiler, but if `--enable-parallel'
- ## is defined below then we're still building a parallel hdf5.
- ;;
-esac
-
-## ----------------------------------------------------------------------
-## If the Fortran compiler is obviously a parallel compiler then we're
-## building a parallel version of hdf5 and should define HAVE_PARALLEL.
-## Furthermore, the name of the compiler might tell us how to run the
-## resulting executable. For `mpif90' the executable should be run with
-## `mpiexec' from the same directory as mpif90 if it exists.
-##
-
-if test "X$HDF_FORTRAN" = "Xyes" ; then
- ## Change to the Fortran 90 language
- ac_ext=${ac_fc_srcext-f}
-ac_compile='$FC -c $FCFLAGS $ac_fcflags_srcext conftest.$ac_ext >&5'
-ac_link='$FC -o conftest$ac_exeext $FCFLAGS $LDFLAGS $ac_fcflags_srcext conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_fc_compiler_gnu
-
-
- case "$FC" in
- *mpif90*)
- ## The Fortran mpich compiler. Use mpiexec from the same directory
- ## if it exists.
- PARALLEL=mpif90
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for mpiexec" >&5
-$as_echo_n "checking for mpiexec... " >&6; }
-
- ## Find the path where mpif90 is located.
- cmd=`echo $FC |cut -f1 -d' '`
- if (echo $cmd |grep / >/dev/null); then
- path="`echo $cmd |sed 's/\(.*\)\/.*$/\1/'`"
- else
- for path in `echo $PATH | ${TR} ":" " "`; do
- if test -x $path/$cmd; then
- break;
- fi
- done
- fi
-
- ## Is there an mpiexec at that path?
- if test -x $path/mpiexec; then
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: $path/mpiexec" >&5
-$as_echo "$path/mpiexec" >&6; }
- RUNSERIAL="${RUNSERIAL:-none}"
-
- if test -z "$RUNPARALLEL"; then
- RUNPARALLEL="$path/mpiexec -n \$\${NPROCS:=6}"
- fi
- else
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: none" >&5
-$as_echo "none" >&6; }
- fi
- ;;
-
- *mpxlf* | *mpxlf_r* | *mpxlf90* | *mpxlf90_r* | *mpxlf95* | *mpxlf95_r*)
- ## The IBM compiler
- PARALLEL="$FC"
- ;;
-
- *)
- ## Probably not a parallel compiler, but if `--enable-parallel'
- ## is defined below then we're still building a parallel hdf5.
- ;;
- esac
-
- ## Change to the C language
- ac_ext=c
-ac_cpp='$CPP $CPPFLAGS'
-ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
-ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
-ac_compiler_gnu=$ac_cv_c_compiler_gnu
-
-fi
-
-## -----------------------------------------------------------------------------
-## If shared libraries are being used with parallel, disable them, unless the
-## user explicity enables them via the '--enable-shared' option.
-
-if test "X${enable_shared}" = "X" -a "X${enable_parallel}" = "Xyes"; then
- echo ' shared libraries disabled in parallel'
- enable_shared="no"
-elif test "X${enable_shared}" = "Xyes" -a "X${enable_parallel}" = "Xyes"; then
- echo ' shared libraries explicitly enabled by user'
-elif test "X${enable_shared}" = "X" -a "X${PARALLEL}" != "X"; then
- echo ' shared libraries disabled when a parallel compiler is being used'
- enable_shared="no"
-elif test "X${enable_shared}" = "Xyes" -a "X${PARALLEL}" != "X"; then
- echo ' shared libraries explicitly enabled by user'
-fi
-
-## ----------------------------------------------------------------------
## Fortran libraries are not currently supported on Mac. Disable them.
## (this is overridable with --enable-unsupported).
##
@@ -22865,113 +22465,6 @@ $as_echo "#define TIME_WITH_SYS_TIME 1" >>confdefs.h
fi
-## ----------------------------------------------------------------------
-## Check for these two functions before the time headers are checked
-## for, otherwise they are not detected correctly on Solaris (the
-## configure test will fail due to multiply-defined symbols).
-##
-for ac_func in difftime
-do :
- ac_fn_c_check_func "$LINENO" "difftime" "ac_cv_func_difftime"
-if test "x$ac_cv_func_difftime" = xyes; then :
- cat >>confdefs.h <<_ACEOF
-#define HAVE_DIFFTIME 1
-_ACEOF
-
-fi
-done
-
-for ac_func in gettimeofday
-do :
- ac_fn_c_check_func "$LINENO" "gettimeofday" "ac_cv_func_gettimeofday"
-if test "x$ac_cv_func_gettimeofday" = xyes; then :
- cat >>confdefs.h <<_ACEOF
-#define HAVE_GETTIMEOFDAY 1
-_ACEOF
- have_gettime="yes"
-else
- have_gettime="no"
-fi
-done
-
-{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for library containing clock_gettime" >&5
-$as_echo_n "checking for library containing clock_gettime... " >&6; }
-if ${ac_cv_search_clock_gettime+:} false; then :
- $as_echo_n "(cached) " >&6
-else
- ac_func_search_save_LIBS=$LIBS
-cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-
-/* Override any GCC internal prototype to avoid an error.
- Use char because int might match the return type of a GCC
- builtin and then its argument prototype would still apply. */
-#ifdef __cplusplus
-extern "C"
-#endif
-char clock_gettime ();
-#ifdef FC_DUMMY_MAIN
-#ifndef FC_DUMMY_MAIN_EQ_F77
-# ifdef __cplusplus
- extern "C"
-# endif
- int FC_DUMMY_MAIN() { return 1; }
-#endif
-#endif
-int
-main ()
-{
-return clock_gettime ();
- ;
- return 0;
-}
-_ACEOF
-for ac_lib in '' rt posix4; do
- if test -z "$ac_lib"; then
- ac_res="none required"
- else
- ac_res=-l$ac_lib
- LIBS="-l$ac_lib $ac_func_search_save_LIBS"
- fi
- if ac_fn_c_try_link "$LINENO"; then :
- ac_cv_search_clock_gettime=$ac_res
-fi
-rm -f core conftest.err conftest.$ac_objext \
- conftest$ac_exeext
- if ${ac_cv_search_clock_gettime+:} false; then :
- break
-fi
-done
-if ${ac_cv_search_clock_gettime+:} false; then :
-
-else
- ac_cv_search_clock_gettime=no
-fi
-rm conftest.$ac_ext
-LIBS=$ac_func_search_save_LIBS
-fi
-{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_search_clock_gettime" >&5
-$as_echo "$ac_cv_search_clock_gettime" >&6; }
-ac_res=$ac_cv_search_clock_gettime
-if test "$ac_res" != no; then :
- test "$ac_res" = "none required" || LIBS="$ac_res $LIBS"
-
-fi
-
-for ac_func in clock_gettime
-do :
- ac_fn_c_check_func "$LINENO" "clock_gettime" "ac_cv_func_clock_gettime"
-if test "x$ac_cv_func_clock_gettime" = xyes; then :
- cat >>confdefs.h <<_ACEOF
-#define HAVE_CLOCK_GETTIME 1
-_ACEOF
- have_clock_gettime="yes"
-else
- have_clock_gettime="no"
-fi
-done
-
-
## Unix
for ac_header in sys/resource.h sys/time.h unistd.h sys/ioctl.h sys/stat.h
do :
@@ -23232,92 +22725,15 @@ $as_echo "no" >&6; }
fi
## ----------------------------------------------------------------------
-## Test for Largefile support.
-##
-{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if configure should try to set up large file support" >&5
-$as_echo_n "checking if configure should try to set up large file support... " >&6; }
-
-# Check whether --enable-largefile was given.
-if test "${enable_largefile+set}" = set; then :
- enableval=$enable_largefile;
-fi
-
-
-## If largefile support is enabled, then set up appropriate compiler options.
-if test "$enable_largefile" != no; then
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
-$as_echo "yes" >&6; }
-
- ## Check for needed compiler options. This check is pulled drectly
- ## from autoconf's AC_SYS_LARGEFILE macro, as of Autoconf v2.65.
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for special C compiler options needed for large files" >&5
-$as_echo_n "checking for special C compiler options needed for large files... " >&6; }
-if ${ac_cv_sys_largefile_CC+:} false; then :
- $as_echo_n "(cached) " >&6
-else
- ac_cv_sys_largefile_CC=no
- if test "$GCC" != yes; then
- ac_save_CC=$CC
- while :; do
- ## IRIX 6.2 and later do not support large files by default,
- ## so use the C compiler's -n32 option if that helps.
- cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-#include <sys/types.h>
- /* Check that off_t can represent 2**63 - 1 correctly.
- We can't simply define LARGE_OFF_T to be 9223372036854775807,
- since some C++ compilers masquerading as C compilers
- incorrectly reject 9223372036854775807. */
-#define LARGE_OFF_T (((off_t) 1 << 62) - 1 + ((off_t) 1 << 62))
- int off_t_is_large[(LARGE_OFF_T % 2147483629 == 721
- && LARGE_OFF_T % 2147483647 == 1)
- ? 1 : -1];
-#ifdef FC_DUMMY_MAIN
-#ifndef FC_DUMMY_MAIN_EQ_F77
-# ifdef __cplusplus
- extern "C"
-# endif
- int FC_DUMMY_MAIN() { return 1; }
-#endif
-#endif
-int
-main ()
-{
-
- ;
- return 0;
-}
-_ACEOF
- if ac_fn_c_try_compile "$LINENO"; then :
- break
-fi
-rm -f core conftest.err conftest.$ac_objext
- CC="$CC -n32"
- if ac_fn_c_try_compile "$LINENO"; then :
- ac_cv_sys_largefile_CC=' -n32'; break
-fi
-rm -f core conftest.err conftest.$ac_objext
- break
- done
- CC=$ac_save_CC
- rm -f conftest.$ac_ext
- fi
-fi
-{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_sys_largefile_CC" >&5
-$as_echo "$ac_cv_sys_largefile_CC" >&6; }
- if test "$ac_cv_sys_largefile_CC" != no; then
- CC=$CC$ac_cv_sys_largefile_CC
- fi
-
- ## Use the macro _AC_SYS_LARGEFILE_MACRO_VALUE to test defines
- ## that might need to be set for largefile support to behave
- ## correctly. This macro is defined in acsite.m4 and overrides
- ## the version provided by Autoconf (as of v2.65). The custom
- ## macro additionally adds the appropriate defines to AM_CPPFLAGS
- ## so that later configure checks have them visible.
-
- ## Check for _FILE_OFFSET_BITS
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for _FILE_OFFSET_BITS value needed for large files" >&5
+## Use the macro _AC_SYS_LARGEFILE_MACRO_VALUE to test defines
+## that might need to be set for largefile support to behave
+## correctly. This macro is defined in acsite.m4 and overrides
+## the version provided by Autoconf (as of v2.65). The custom
+## macro additionally adds the appropriate defines to AM_CPPFLAGS
+## so that later configure checks have them visible.
+
+## Check for _FILE_OFFSET_BITS
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for _FILE_OFFSET_BITS value needed for large files" >&5
$as_echo_n "checking for _FILE_OFFSET_BITS value needed for large files... " >&6; }
if ${ac_cv_sys_file_offset_bits+:} false; then :
$as_echo_n "(cached) " >&6
@@ -23403,9 +22819,9 @@ _ACEOF
esac
rm -rf conftest*
- ## Check for _LARGE_FILES
- if test "$ac_cv_sys_file_offset_bits" = unknown; then
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for _LARGE_FILES value needed for large files" >&5
+## Check for _LARGE_FILES
+if test "$ac_cv_sys_file_offset_bits" = unknown; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for _LARGE_FILES value needed for large files" >&5
$as_echo_n "checking for _LARGE_FILES value needed for large files... " >&6; }
if ${ac_cv_sys_large_files+:} false; then :
$as_echo_n "(cached) " >&6
@@ -23490,68 +22906,6 @@ _ACEOF
AM_CPPFLAGS="-D_LARGE_FILES=$ac_cv_sys_large_files $AM_CPPFLAGS";;
esac
rm -rf conftest*
- fi
-
- ## Now actually test to see if we can create large files after we've
- ## checked for any needed defines.
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking if large (64-bit) files are supported on this system." >&5
-$as_echo_n "checking if large (64-bit) files are supported on this system.... " >&6; }
- if ${hdf5_cv_have_lfs+:} false; then :
- $as_echo_n "(cached) " >&6
-else
- if test "$cross_compiling" = yes; then :
- { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
-$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
-as_fn_error $? "cannot run test program while cross compiling
-See \`config.log' for more details" "$LINENO" 5; }
-else
- cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-
- #include <stdio.h>
- #include <unistd.h>
- #include <stdlib.h>
- #include <fcntl.h>
- #define BIG_FILE (off_t)0x80000000UL
- int main(void) {
- int fd;
- if ((fd=open("test.conf", O_RDWR|O_TRUNC|O_CREAT, 0666)) < 0) exit(1);
- if (lseek(fd, BIG_FILE, SEEK_SET)!=BIG_FILE) exit(1);
- if (5!=write(fd, "hello", (size_t)5)) exit(1);
- if (lseek(fd, 2*BIG_FILE, SEEK_SET) != 2*BIG_FILE) exit(1);
- if (5!=write(fd, "hello", (size_t)5)) exit(1);
- if (unlink("test.conf") < 0) exit(1);
- exit(0);
- }
-
-_ACEOF
-if ac_fn_c_try_run "$LINENO"; then :
- hdf5_cv_have_lfs=yes
-else
- hdf5_cv_have_lfs=no
-fi
-rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
- conftest.$ac_objext conftest.beam conftest.$ac_ext
-fi
-
-fi
-
-
- if test "X${hdf5_cv_have_lfs}" = "Xyes"; then
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
-$as_echo "yes" >&6; }
- LARGEFILE="yes"
- fi
- if test "X${hdf5_cv_have_lfs}" = "Xno"; then
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
-$as_echo "no" >&6; }
- LARGEFILE="no"
- fi
-
-else
- LARGEFILE="no"
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
-$as_echo "no" >&6; }
fi
## ----------------------------------------------------------------------
@@ -23559,28 +22913,35 @@ fi
##
case "$host_cpu-$host_vendor-$host_os" in
*linux*)
- ## If largefile support is enabled, then make available various
- ## LFS-related routines using the following _LARGEFILE*_SOURCE macros.
- if test "X$LARGEFILE" != "Xno"; then
- AM_CPPFLAGS="-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE $AM_CPPFLAGS"
- fi
+ ## Make available various LFS-related routines using the following
+ ## _LARGEFILE*_SOURCE macros.
+ AM_CPPFLAGS="-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE $AM_CPPFLAGS"
## Add POSIX support on Linux systems, so <features.h> defines
## __USE_POSIX, which is required to get the prototype for fdopen
## defined correctly in <stdio.h>.
+ ##
## This flag was removed from h5cc as of 2009-10-17 when it was found
## that the flag broke compiling netCDF-4 code with h5cc, but kept in
## H5_CPPFLAGS because fdopen and HDfdopen fail without it. HDfdopen
## is used only by H5_debug_mask which is used only when debugging in
## H5_init_library (all in H5.c). When the flag was removed this was
## the only compile failure noted.
+ ##
## This was originally defined as _POSIX_SOURCE which was updated to
## _POSIX_C_SOURCE=199506L to expose a greater amount of POSIX
## functionality so clock_gettime and CLOCK_MONOTONIC are defined
- ## correctly.
+ ## correctly. This was later updated to 200112L so that
+ ## posix_memalign() is visible for the direct VFD code on Linux
+ ## systems.
+ ##
## POSIX feature information can be found in the gcc manual at:
## http://www.gnu.org/s/libc/manual/html_node/Feature-Test-Macros.html
- H5_CPPFLAGS="-D_POSIX_C_SOURCE=199506L $H5_CPPFLAGS"
+ H5_CPPFLAGS="-D_POSIX_C_SOURCE=200112L $H5_CPPFLAGS"
+
+ ## Need to add this so that O_DIRECT is visible for the direct
+ ## VFD on Linux systems.
+ AM_CPPFLAGS="-D_GNU_SOURCE $AM_CPPFLAGS"
## Also add BSD support on Linux systems, so <features.h> defines
## __USE_BSD, which is required to get the prototype for strdup
@@ -26794,42 +26155,6 @@ $as_echo "no" >&6; }
fi
rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
-## check if `struct tm' has a `__tm_gmtoff' member.
-{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for __tm_gmtoff in struct tm" >&5
-$as_echo_n "checking for __tm_gmtoff in struct tm... " >&6; }
-cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-
- #include <sys/time.h>
- #include <time.h>
-#ifdef FC_DUMMY_MAIN
-#ifndef FC_DUMMY_MAIN_EQ_F77
-# ifdef __cplusplus
- extern "C"
-# endif
- int FC_DUMMY_MAIN() { return 1; }
-#endif
-#endif
-int
-main ()
-{
-struct tm tm; tm.__tm_gmtoff=0;
- ;
- return 0;
-}
-_ACEOF
-if ac_fn_c_try_compile "$LINENO"; then :
-
-$as_echo "#define HAVE___TM_GMTOFF 1" >>confdefs.h
-
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
-$as_echo "yes" >&6; }
-else
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
-$as_echo "no" >&6; }
-fi
-rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
-
## Check whether the global variable `timezone' is defined.
{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for global timezone variable" >&5
$as_echo_n "checking for global timezone variable... " >&6; }
@@ -26876,217 +26201,6 @@ rm -f core conftest.err conftest.$ac_objext \
;;
esac
-## Check whether `struct timezone' is defined.
-{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether struct tm is in sys/time.h or time.h" >&5
-$as_echo_n "checking whether struct tm is in sys/time.h or time.h... " >&6; }
-if ${ac_cv_struct_tm+:} false; then :
- $as_echo_n "(cached) " >&6
-else
- cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-#include <sys/types.h>
-#include <time.h>
-
-#ifdef FC_DUMMY_MAIN
-#ifndef FC_DUMMY_MAIN_EQ_F77
-# ifdef __cplusplus
- extern "C"
-# endif
- int FC_DUMMY_MAIN() { return 1; }
-#endif
-#endif
-int
-main ()
-{
-struct tm tm;
- int *p = &tm.tm_sec;
- return !p;
- ;
- return 0;
-}
-_ACEOF
-if ac_fn_c_try_compile "$LINENO"; then :
- ac_cv_struct_tm=time.h
-else
- ac_cv_struct_tm=sys/time.h
-fi
-rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_struct_tm" >&5
-$as_echo "$ac_cv_struct_tm" >&6; }
-if test $ac_cv_struct_tm = sys/time.h; then
-
-$as_echo "#define TM_IN_SYS_TIME 1" >>confdefs.h
-
-fi
-
-ac_fn_c_check_member "$LINENO" "struct tm" "tm_zone" "ac_cv_member_struct_tm_tm_zone" "#include <sys/types.h>
-#include <$ac_cv_struct_tm>
-
-"
-if test "x$ac_cv_member_struct_tm_tm_zone" = xyes; then :
-
-cat >>confdefs.h <<_ACEOF
-#define HAVE_STRUCT_TM_TM_ZONE 1
-_ACEOF
-
-
-fi
-
-if test "$ac_cv_member_struct_tm_tm_zone" = yes; then
-
-$as_echo "#define HAVE_TM_ZONE 1" >>confdefs.h
-
-else
- ac_fn_c_check_decl "$LINENO" "tzname" "ac_cv_have_decl_tzname" "#include <time.h>
-"
-if test "x$ac_cv_have_decl_tzname" = xyes; then :
- ac_have_decl=1
-else
- ac_have_decl=0
-fi
-
-cat >>confdefs.h <<_ACEOF
-#define HAVE_DECL_TZNAME $ac_have_decl
-_ACEOF
-
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for tzname" >&5
-$as_echo_n "checking for tzname... " >&6; }
-if ${ac_cv_var_tzname+:} false; then :
- $as_echo_n "(cached) " >&6
-else
- cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-#include <time.h>
-#if !HAVE_DECL_TZNAME
-extern char *tzname[];
-#endif
-
-#ifdef FC_DUMMY_MAIN
-#ifndef FC_DUMMY_MAIN_EQ_F77
-# ifdef __cplusplus
- extern "C"
-# endif
- int FC_DUMMY_MAIN() { return 1; }
-#endif
-#endif
-int
-main ()
-{
-return tzname[0][0];
- ;
- return 0;
-}
-_ACEOF
-if ac_fn_c_try_link "$LINENO"; then :
- ac_cv_var_tzname=yes
-else
- ac_cv_var_tzname=no
-fi
-rm -f core conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
-fi
-{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_var_tzname" >&5
-$as_echo "$ac_cv_var_tzname" >&6; }
- if test $ac_cv_var_tzname = yes; then
-
-$as_echo "#define HAVE_TZNAME 1" >>confdefs.h
-
- fi
-fi
-
-{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for struct timezone" >&5
-$as_echo_n "checking for struct timezone... " >&6; }
-cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-
- #include <sys/types.h>
- #include <sys/time.h>
- #include <time.h>
-#ifdef FC_DUMMY_MAIN
-#ifndef FC_DUMMY_MAIN_EQ_F77
-# ifdef __cplusplus
- extern "C"
-# endif
- int FC_DUMMY_MAIN() { return 1; }
-#endif
-#endif
-int
-main ()
-{
-struct timezone tz; tz.tz_minuteswest=0;
- ;
- return 0;
-}
-_ACEOF
-if ac_fn_c_try_compile "$LINENO"; then :
-
-$as_echo "#define HAVE_STRUCT_TIMEZONE 1" >>confdefs.h
-
- have_struct_tz="yes"
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
-$as_echo "yes" >&6; }
-else
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
-$as_echo "no" >&6; }
-fi
-rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
-
-## If gettimeofday() is going to be used, make sure it uses the timezone struct
-
-if test "$have_gettime" = "yes" -a "$have_struct_tz" = "yes"; then
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether gettimeofday() gives timezone" >&5
-$as_echo_n "checking whether gettimeofday() gives timezone... " >&6; }
- if ${hdf5_cv_gettimeofday_tz+:} false; then :
- $as_echo_n "(cached) " >&6
-else
- if test "$cross_compiling" = yes; then :
- { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
-$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
-as_fn_error $? "cannot run test program while cross compiling
-See \`config.log' for more details" "$LINENO" 5; }
-else
- cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-
- #include <time.h>
- #include <sys/time.h>
- int main(void)
- {
- struct timeval tv;
- struct timezone tz;
- tz.tz_minuteswest = 7777; /* Initialize to an unreasonable number */
- tz.tz_dsttime = 7;
- gettimeofday(&tv, &tz);
- /* Check whether the function returned any value at all */
- if(tz.tz_minuteswest == 7777 && tz.tz_dsttime == 7)
- exit(1);
- else exit (0);
- }
-_ACEOF
-if ac_fn_c_try_run "$LINENO"; then :
- hdf5_cv_gettimeofday_tz=yes
-else
- hdf5_cv_gettimeofday_tz=no
-fi
-rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
- conftest.$ac_objext conftest.beam conftest.$ac_ext
-fi
-
-fi
-
-
- if test ${hdf5_cv_gettimeofday_tz} = "yes"; then
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
-$as_echo "yes" >&6; }
-
-$as_echo "#define GETTIMEOFDAY_GIVES_TZ 1" >>confdefs.h
-
- else
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
-$as_echo "no" >&6; }
- fi
-fi
## ----------------------------------------------------------------------
## Does the struct stat have the st_blocks field? This field is not Posix.
@@ -27306,7 +26420,73 @@ rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
## ----------------------------------------------------------------------
## Check for functions.
##
-for ac_func in alarm BSDgettimeofday fork frexpf frexpl
+## NOTE: clock_gettime may require linking to the rt or posix4 library
+## so we'll search for it before calling AC_CHECK_FUNCS.
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for library containing clock_gettime" >&5
+$as_echo_n "checking for library containing clock_gettime... " >&6; }
+if ${ac_cv_search_clock_gettime+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ ac_func_search_save_LIBS=$LIBS
+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
+/* end confdefs.h. */
+
+/* Override any GCC internal prototype to avoid an error.
+ Use char because int might match the return type of a GCC
+ builtin and then its argument prototype would still apply. */
+#ifdef __cplusplus
+extern "C"
+#endif
+char clock_gettime ();
+#ifdef FC_DUMMY_MAIN
+#ifndef FC_DUMMY_MAIN_EQ_F77
+# ifdef __cplusplus
+ extern "C"
+# endif
+ int FC_DUMMY_MAIN() { return 1; }
+#endif
+#endif
+int
+main ()
+{
+return clock_gettime ();
+ ;
+ return 0;
+}
+_ACEOF
+for ac_lib in '' rt posix4; do
+ if test -z "$ac_lib"; then
+ ac_res="none required"
+ else
+ ac_res=-l$ac_lib
+ LIBS="-l$ac_lib $ac_func_search_save_LIBS"
+ fi
+ if ac_fn_c_try_link "$LINENO"; then :
+ ac_cv_search_clock_gettime=$ac_res
+fi
+rm -f core conftest.err conftest.$ac_objext \
+ conftest$ac_exeext
+ if ${ac_cv_search_clock_gettime+:} false; then :
+ break
+fi
+done
+if ${ac_cv_search_clock_gettime+:} false; then :
+
+else
+ ac_cv_search_clock_gettime=no
+fi
+rm conftest.$ac_ext
+LIBS=$ac_func_search_save_LIBS
+fi
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_search_clock_gettime" >&5
+$as_echo "$ac_cv_search_clock_gettime" >&6; }
+ac_res=$ac_cv_search_clock_gettime
+if test "$ac_res" != no; then :
+ test "$ac_res" = "none required" || LIBS="$ac_res $LIBS"
+
+fi
+
+for ac_func in alarm clock_gettime difftime fork frexpf frexpl
do :
as_ac_var=`$as_echo "ac_cv_func_$ac_func" | $as_tr_sh`
ac_fn_c_check_func "$LINENO" "$ac_func" "$as_ac_var"
@@ -27318,7 +26498,7 @@ _ACEOF
fi
done
-for ac_func in gethostname getpwuid getrusage lstat
+for ac_func in gethostname getpwuid getrusage gettimeofday
do :
as_ac_var=`$as_echo "ac_cv_func_$ac_func" | $as_tr_sh`
ac_fn_c_check_func "$LINENO" "$ac_func" "$as_ac_var"
@@ -27330,7 +26510,7 @@ _ACEOF
fi
done
-for ac_func in rand_r random setsysinfo
+for ac_func in lstat rand_r random setsysinfo
do :
as_ac_var=`$as_echo "ac_cv_func_$ac_func" | $as_tr_sh`
ac_fn_c_check_func "$LINENO" "$ac_func" "$as_ac_var"
@@ -28210,10 +27390,7 @@ rm -f confcache
## What header files and libraries do we have to look for for parallel
## support? For the most part, search paths are already specified with
-## CPPFLAGS and LDFLAGS or are known to the compiler. If the user says
-## `--disable-parallel' but specifies a known parallel compiler (like mpicc
-## or mpcc) then parallel support is enabled but configure doesn't search
-## for any parallel header files or libraries.
+## CPPFLAGS and LDFLAGS or are known to the compiler.
##
# Check whether --enable-parallel was given.
if test "${enable_parallel+set}" = set; then :
@@ -28238,26 +27415,11 @@ if test "X${ALLOW_UNSUPPORTED}" != "Xyes"; then
fi
fi
-## It's possible to build in parallel by specifying a parallel compiler
-## without using the --enable-parallel flag. This isn't allowed with
-## C++ or threadsafe, either, unless the --enable-unsupported flag
-## has also been specified.
-if test "X${ALLOW_UNSUPPORTED}" != "Xyes"; then
- if test "X${PARALLEL}" != "X" -a "X${enable_cxx}" = "Xyes" ; then
- as_fn_error $? "An MPI compiler is being used; --enable-cxx is not allowed. Use --enable-unsupported to override this error." "$LINENO" 5
- fi
- if test "X${PARALLEL}" != "X" -a "X${THREADSAFE}" = "Xyes"; then
- as_fn_error $? "An MPI compiler is being used; --enable-threadsafe is not allowed. Use --enable-unsupported to override this error." "$LINENO" 5
- fi
-fi
-
{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for parallel support files" >&5
$as_echo_n "checking for parallel support files... " >&6; }
case "X-$enable_parallel" in
X-|X-no|X-none)
- ## Either we are not compiling for parallel or the header and
- ## library files and locations are known to the compiler (this is
- ## the case for a correct installation of mpicc for instance).
+ ## We are not compiling for parallel.
{ $as_echo "$as_me:${as_lineno-$LINENO}: result: skipped" >&5
$as_echo "skipped" >&6; }
;;
@@ -28269,185 +27431,12 @@ $as_echo "skipped" >&6; }
$as_echo "provided by compiler" >&6; }
PARALLEL=yes
- ## Try link a simple MPI program. If fail, try again with -lmpi and
- ## -lmpich.
+ ## Try link a simple MPI program.
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether a simple MPI-IO C program can be linked" >&5
+$as_echo_n "checking whether a simple MPI-IO C program can be linked... " >&6; }
cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
-
-#ifdef FC_DUMMY_MAIN
-#ifndef FC_DUMMY_MAIN_EQ_F77
-# ifdef __cplusplus
- extern "C"
-# endif
- int FC_DUMMY_MAIN() { return 1; }
-#endif
-#endif
-int
-main ()
-{
-MPI_Init()
- ;
- return 0;
-}
-_ACEOF
-if ac_fn_c_try_link "$LINENO"; then :
-
-else
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for MPI_Init in -lmpi" >&5
-$as_echo_n "checking for MPI_Init in -lmpi... " >&6; }
-if ${ac_cv_lib_mpi_MPI_Init+:} false; then :
- $as_echo_n "(cached) " >&6
-else
- ac_check_lib_save_LIBS=$LIBS
-LIBS="-lmpi $LIBS"
-cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-
-/* Override any GCC internal prototype to avoid an error.
- Use char because int might match the return type of a GCC
- builtin and then its argument prototype would still apply. */
-#ifdef __cplusplus
-extern "C"
-#endif
-char MPI_Init ();
-#ifdef FC_DUMMY_MAIN
-#ifndef FC_DUMMY_MAIN_EQ_F77
-# ifdef __cplusplus
- extern "C"
-# endif
- int FC_DUMMY_MAIN() { return 1; }
-#endif
-#endif
-int
-main ()
-{
-return MPI_Init ();
- ;
- return 0;
-}
-_ACEOF
-if ac_fn_c_try_link "$LINENO"; then :
- ac_cv_lib_mpi_MPI_Init=yes
-else
- ac_cv_lib_mpi_MPI_Init=no
-fi
-rm -f core conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
-LIBS=$ac_check_lib_save_LIBS
-fi
-{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_mpi_MPI_Init" >&5
-$as_echo "$ac_cv_lib_mpi_MPI_Init" >&6; }
-if test "x$ac_cv_lib_mpi_MPI_Init" = xyes; then :
- cat >>confdefs.h <<_ACEOF
-#define HAVE_LIBMPI 1
-_ACEOF
-
- LIBS="-lmpi $LIBS"
-
-else
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for MPI_Init in -lmpich" >&5
-$as_echo_n "checking for MPI_Init in -lmpich... " >&6; }
-if ${ac_cv_lib_mpich_MPI_Init+:} false; then :
- $as_echo_n "(cached) " >&6
-else
- ac_check_lib_save_LIBS=$LIBS
-LIBS="-lmpich $LIBS"
-cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-
-/* Override any GCC internal prototype to avoid an error.
- Use char because int might match the return type of a GCC
- builtin and then its argument prototype would still apply. */
-#ifdef __cplusplus
-extern "C"
-#endif
-char MPI_Init ();
-#ifdef FC_DUMMY_MAIN
-#ifndef FC_DUMMY_MAIN_EQ_F77
-# ifdef __cplusplus
- extern "C"
-# endif
- int FC_DUMMY_MAIN() { return 1; }
-#endif
-#endif
-int
-main ()
-{
-return MPI_Init ();
- ;
- return 0;
-}
-_ACEOF
-if ac_fn_c_try_link "$LINENO"; then :
- ac_cv_lib_mpich_MPI_Init=yes
-else
- ac_cv_lib_mpich_MPI_Init=no
-fi
-rm -f core conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
-LIBS=$ac_check_lib_save_LIBS
-fi
-{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_mpich_MPI_Init" >&5
-$as_echo "$ac_cv_lib_mpich_MPI_Init" >&6; }
-if test "x$ac_cv_lib_mpich_MPI_Init" = xyes; then :
- cat >>confdefs.h <<_ACEOF
-#define HAVE_LIBMPICH 1
-_ACEOF
-
- LIBS="-lmpich $LIBS"
-
-else
- PARALLEL=no
-fi
-
-fi
-
-fi
-rm -f core conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
-
- ## Then try link a simple MPI-IO program. If fail, try again with
- ## -lmpio.
- if test "X$PARALLEL" = "Xyes"; then
- cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-
-#ifdef FC_DUMMY_MAIN
-#ifndef FC_DUMMY_MAIN_EQ_F77
-# ifdef __cplusplus
- extern "C"
-# endif
- int FC_DUMMY_MAIN() { return 1; }
-#endif
-#endif
-int
-main ()
-{
-MPI_File_open()
- ;
- return 0;
-}
-_ACEOF
-if ac_fn_c_try_link "$LINENO"; then :
-
-else
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for MPI_File_open in -lmpio" >&5
-$as_echo_n "checking for MPI_File_open in -lmpio... " >&6; }
-if ${ac_cv_lib_mpio_MPI_File_open+:} false; then :
- $as_echo_n "(cached) " >&6
-else
- ac_check_lib_save_LIBS=$LIBS
-LIBS="-lmpio $LIBS"
-cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-
-/* Override any GCC internal prototype to avoid an error.
- Use char because int might match the return type of a GCC
- builtin and then its argument prototype would still apply. */
-#ifdef __cplusplus
-extern "C"
-#endif
-char MPI_File_open ();
+#include <mpi.h>
#ifdef FC_DUMMY_MAIN
#ifndef FC_DUMMY_MAIN_EQ_F77
# ifdef __cplusplus
@@ -28459,169 +27448,61 @@ char MPI_File_open ();
int
main ()
{
-return MPI_File_open ();
+ MPI_Init(0, (void *)0);
+ MPI_File_open(0, (void *)0, 0, 0, (void *)0);
;
return 0;
}
_ACEOF
if ac_fn_c_try_link "$LINENO"; then :
- ac_cv_lib_mpio_MPI_File_open=yes
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
+$as_echo "yes" >&6; }
else
- ac_cv_lib_mpio_MPI_File_open=no
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
+ as_fn_error $? "unable to link a simple MPI-IO C program" "$LINENO" 5
fi
rm -f core conftest.err conftest.$ac_objext \
conftest$ac_exeext conftest.$ac_ext
-LIBS=$ac_check_lib_save_LIBS
-fi
-{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_mpio_MPI_File_open" >&5
-$as_echo "$ac_cv_lib_mpio_MPI_File_open" >&6; }
-if test "x$ac_cv_lib_mpio_MPI_File_open" = xyes; then :
- cat >>confdefs.h <<_ACEOF
-#define HAVE_LIBMPIO 1
-_ACEOF
-
- LIBS="-lmpio $LIBS"
-else
- PARALLEL=no
-fi
+ if test "X$HDF_FORTRAN" = "Xyes"; then
-fi
-rm -f core conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
- fi
- if test "X$HDF_FORTRAN" = "Xyes"; then
- ## Change to the Fortran 90 language
ac_ext=${ac_fc_srcext-f}
ac_compile='$FC -c $FCFLAGS $ac_fcflags_srcext conftest.$ac_ext >&5'
ac_link='$FC -o conftest$ac_exeext $FCFLAGS $LDFLAGS $ac_fcflags_srcext conftest.$ac_ext $LIBS >&5'
ac_compiler_gnu=$ac_cv_fc_compiler_gnu
- ## Try link a simple MPI program. If fail, try again with -lmpi.
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether a simple MPI-IO Fortran program can be linked" >&5
+$as_echo_n "checking whether a simple MPI-IO Fortran program can be linked... " >&6; }
cat > conftest.$ac_ext <<_ACEOF
- program main
- include 'mpif.h'
- integer:: ierr
- call mpi_file_open( ierr )
- end
+ PROGRAM main
+ INCLUDE 'mpif.h'
+ INTEGER :: comm, amode, info, fh, ierror
+ CHARACTER(LEN=1) :: filename
+ CALL MPI_File_open( comm, filename, amode, info, fh, ierror)
+ END
_ACEOF
if ac_fn_fc_try_link "$LINENO"; then :
-
-else
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for mpi_file_open in -lmpi" >&5
-$as_echo_n "checking for mpi_file_open in -lmpi... " >&6; }
-if ${ac_cv_lib_mpi_mpi_file_open+:} false; then :
- $as_echo_n "(cached) " >&6
-else
- ac_check_lib_save_LIBS=$LIBS
-LIBS="-lmpi $LIBS"
-cat > conftest.$ac_ext <<_ACEOF
- program main
- call mpi_file_open
- end
-_ACEOF
-if ac_fn_fc_try_link "$LINENO"; then :
- ac_cv_lib_mpi_mpi_file_open=yes
-else
- ac_cv_lib_mpi_mpi_file_open=no
-fi
-rm -f core conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
-LIBS=$ac_check_lib_save_LIBS
-fi
-{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_mpi_mpi_file_open" >&5
-$as_echo "$ac_cv_lib_mpi_mpi_file_open" >&6; }
-if test "x$ac_cv_lib_mpi_mpi_file_open" = xyes; then :
- cat >>confdefs.h <<_ACEOF
-#define HAVE_LIBMPI 1
-_ACEOF
-
- LIBS="-lmpi $LIBS"
-
-else
- PARALLEL=no
-fi
-
-fi
-rm -f core conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
-
- ## Then try link a simple MPI-IO program. If fail, try again with
- ## -lmpio.
- if test "X$PARALLEL" = "Xyes"; then
- cat > conftest.$ac_ext <<_ACEOF
-
- program main
- include 'mpif.h'
- integer:: ierr
- call mpi_file_open( ierr )
- end
-_ACEOF
-if ac_fn_fc_try_link "$LINENO"; then :
-
-else
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for mpi_file_open in -lmpio" >&5
-$as_echo_n "checking for mpi_file_open in -lmpio... " >&6; }
-if ${ac_cv_lib_mpio_mpi_file_open+:} false; then :
- $as_echo_n "(cached) " >&6
-else
- ac_check_lib_save_LIBS=$LIBS
-LIBS="-lmpio $LIBS"
-cat > conftest.$ac_ext <<_ACEOF
- program main
- call mpi_file_open
- end
-_ACEOF
-if ac_fn_fc_try_link "$LINENO"; then :
- ac_cv_lib_mpio_mpi_file_open=yes
-else
- ac_cv_lib_mpio_mpi_file_open=no
-fi
-rm -f core conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
-LIBS=$ac_check_lib_save_LIBS
-fi
-{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_mpio_mpi_file_open" >&5
-$as_echo "$ac_cv_lib_mpio_mpi_file_open" >&6; }
-if test "x$ac_cv_lib_mpio_mpi_file_open" = xyes; then :
- cat >>confdefs.h <<_ACEOF
-#define HAVE_LIBMPIO 1
-_ACEOF
-
- LIBS="-lmpio $LIBS"
-
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
+$as_echo "yes" >&6; }
else
- PARALLEL=no
-fi
-
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
+ as_fn_error $? "unable to link a simple MPI-IO Fortran program" "$LINENO" 5
fi
rm -f core conftest.err conftest.$ac_objext \
conftest$ac_exeext conftest.$ac_ext
- fi
- ## Change to the C language
ac_ext=c
ac_cpp='$CPP $CPPFLAGS'
ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
ac_compiler_gnu=$ac_cv_c_compiler_gnu
- fi
- ## Set RUNPARALLEL to mpiexec if not set yet.
- ## Check for building on Cray if RUNPARALLEL is not yet set by checking
- ## for 'aprun' command (which is the parallel job launcher, like mpiexec).
- if test "X$PARALLEL" = "Xyes" -a -z "$RUNPARALLEL"; then
- ## Find the path where aprun is located.
- for path in `echo $PATH | ${TR} ":" " "`; do
- if test -x $path/aprun; then
- RUNPARALLEL="aprun -q -n \$\${NPROCS:=6}"
- break;
- fi
- done
fi
## Set RUNPARALLEL to mpiexec if not set yet.
@@ -28661,39 +27542,6 @@ $as_echo_n "checking prefix for running in parallel... " >&6; }
{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $RUNPARALLEL" >&5
$as_echo "$RUNPARALLEL" >&6; }
- ## Check that we can link a simple MPI and MPI-IO application
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether a simple MPI-IO program can be linked" >&5
-$as_echo_n "checking whether a simple MPI-IO program can be linked... " >&6; }
- cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-
-#ifdef FC_DUMMY_MAIN
-#ifndef FC_DUMMY_MAIN_EQ_F77
-# ifdef __cplusplus
- extern "C"
-# endif
- int FC_DUMMY_MAIN() { return 1; }
-#endif
-#endif
-int
-main ()
-{
-MPI_Init(); MPI_File_open();
- ;
- return 0;
-}
-_ACEOF
-if ac_fn_c_try_link "$LINENO"; then :
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
-$as_echo "yes" >&6; }
-else
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
-$as_echo "no" >&6; }
- as_fn_error $? "unable to link a simple MPI-IO application" "$LINENO" 5
-fi
-rm -f core conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
-
## There *must* be some way to run in parallel even if it's just the
## word `none'.
if test -z "$RUNPARALLEL"; then
@@ -28701,7 +27549,8 @@ rm -f core conftest.err conftest.$ac_objext \
fi
## If RUNSERIAL or RUNPARALLEL is the word `none' then replace it with
- ## the empty string.
+ ## the empty string. This means that no launch commands were requested,
+ ## so we will not use any launch commands.
if test "X$RUNSERIAL" = "Xnone"; then
RUNSERIAL=""
fi
@@ -28877,61 +27726,6 @@ else
unset MPE
fi
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for MPE_Init_mpi_io in -llmpe" >&5
-$as_echo_n "checking for MPE_Init_mpi_io in -llmpe... " >&6; }
-if ${ac_cv_lib_lmpe_MPE_Init_mpi_io+:} false; then :
- $as_echo_n "(cached) " >&6
-else
- ac_check_lib_save_LIBS=$LIBS
-LIBS="-llmpe $LIBS"
-cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-
-/* Override any GCC internal prototype to avoid an error.
- Use char because int might match the return type of a GCC
- builtin and then its argument prototype would still apply. */
-#ifdef __cplusplus
-extern "C"
-#endif
-char MPE_Init_mpi_io ();
-#ifdef FC_DUMMY_MAIN
-#ifndef FC_DUMMY_MAIN_EQ_F77
-# ifdef __cplusplus
- extern "C"
-# endif
- int FC_DUMMY_MAIN() { return 1; }
-#endif
-#endif
-int
-main ()
-{
-return MPE_Init_mpi_io ();
- ;
- return 0;
-}
-_ACEOF
-if ac_fn_c_try_link "$LINENO"; then :
- ac_cv_lib_lmpe_MPE_Init_mpi_io=yes
-else
- ac_cv_lib_lmpe_MPE_Init_mpi_io=no
-fi
-rm -f core conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
-LIBS=$ac_check_lib_save_LIBS
-fi
-{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_lmpe_MPE_Init_mpi_io" >&5
-$as_echo "$ac_cv_lib_lmpe_MPE_Init_mpi_io" >&6; }
-if test "x$ac_cv_lib_lmpe_MPE_Init_mpi_io" = xyes; then :
- cat >>confdefs.h <<_ACEOF
-#define HAVE_LIBLMPE 1
-_ACEOF
-
- LIBS="-llmpe $LIBS"
-
-else
- unset MPE
-fi
-
;;
*)
case "$withval" in
@@ -29052,62 +27846,6 @@ else
LDFLAGS="$saved_LDFLAGS"; AM_LDFLAGS="$saved_AM_LDFLAGS"; unset MPE
fi
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for MPE_Init_mpi_io in -llmpe" >&5
-$as_echo_n "checking for MPE_Init_mpi_io in -llmpe... " >&6; }
-if ${ac_cv_lib_lmpe_MPE_Init_mpi_io+:} false; then :
- $as_echo_n "(cached) " >&6
-else
- ac_check_lib_save_LIBS=$LIBS
-LIBS="-llmpe $LIBS"
-cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-
-/* Override any GCC internal prototype to avoid an error.
- Use char because int might match the return type of a GCC
- builtin and then its argument prototype would still apply. */
-#ifdef __cplusplus
-extern "C"
-#endif
-char MPE_Init_mpi_io ();
-#ifdef FC_DUMMY_MAIN
-#ifndef FC_DUMMY_MAIN_EQ_F77
-# ifdef __cplusplus
- extern "C"
-# endif
- int FC_DUMMY_MAIN() { return 1; }
-#endif
-#endif
-int
-main ()
-{
-return MPE_Init_mpi_io ();
- ;
- return 0;
-}
-_ACEOF
-if ac_fn_c_try_link "$LINENO"; then :
- ac_cv_lib_lmpe_MPE_Init_mpi_io=yes
-else
- ac_cv_lib_lmpe_MPE_Init_mpi_io=no
-fi
-rm -f core conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
-LIBS=$ac_check_lib_save_LIBS
-fi
-{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_lmpe_MPE_Init_mpi_io" >&5
-$as_echo "$ac_cv_lib_lmpe_MPE_Init_mpi_io" >&6; }
-if test "x$ac_cv_lib_lmpe_MPE_Init_mpi_io" = xyes; then :
- cat >>confdefs.h <<_ACEOF
-#define HAVE_LIBLMPE 1
-_ACEOF
-
- LIBS="-llmpe $LIBS"
-
-else
- LDFLAGS="$saved_LDFLAGS"; AM_LDFLAGS="$saved_AM_LDFLAGS"; unset MPE
-fi
-
-
else
{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for MPE_Init_log in -lmpe" >&5
$as_echo_n "checking for MPE_Init_log in -lmpe... " >&6; }
@@ -29164,61 +27902,6 @@ else
unset MPE
fi
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for MPE_Init_mpi_io in -llmpe" >&5
-$as_echo_n "checking for MPE_Init_mpi_io in -llmpe... " >&6; }
-if ${ac_cv_lib_lmpe_MPE_Init_mpi_io+:} false; then :
- $as_echo_n "(cached) " >&6
-else
- ac_check_lib_save_LIBS=$LIBS
-LIBS="-llmpe $LIBS"
-cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-
-/* Override any GCC internal prototype to avoid an error.
- Use char because int might match the return type of a GCC
- builtin and then its argument prototype would still apply. */
-#ifdef __cplusplus
-extern "C"
-#endif
-char MPE_Init_mpi_io ();
-#ifdef FC_DUMMY_MAIN
-#ifndef FC_DUMMY_MAIN_EQ_F77
-# ifdef __cplusplus
- extern "C"
-# endif
- int FC_DUMMY_MAIN() { return 1; }
-#endif
-#endif
-int
-main ()
-{
-return MPE_Init_mpi_io ();
- ;
- return 0;
-}
-_ACEOF
-if ac_fn_c_try_link "$LINENO"; then :
- ac_cv_lib_lmpe_MPE_Init_mpi_io=yes
-else
- ac_cv_lib_lmpe_MPE_Init_mpi_io=no
-fi
-rm -f core conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
-LIBS=$ac_check_lib_save_LIBS
-fi
-{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_lmpe_MPE_Init_mpi_io" >&5
-$as_echo "$ac_cv_lib_lmpe_MPE_Init_mpi_io" >&6; }
-if test "x$ac_cv_lib_lmpe_MPE_Init_mpi_io" = xyes; then :
- cat >>confdefs.h <<_ACEOF
-#define HAVE_LIBLMPE 1
-_ACEOF
-
- LIBS="-llmpe $LIBS"
-
-else
- unset MPE
-fi
-
fi
;;
esac
@@ -29230,6 +27913,7 @@ $as_echo "#define HAVE_MPE 1" >>confdefs.h
fi
fi
+
## ----------------------------------------------------------------------
## Turn on internal I/O filters by setting macros in header files
## Internal I/O filters are contained entirely within the library and do
@@ -29303,147 +27987,70 @@ $as_echo "#define HAVE_FILTER_SCALEOFFSET 1" >>confdefs.h
done
fi
-## ----------------------------------------------------------------------
-## This is defined only when we're using CodeWarrior, since it has a
-## broken "open()" call.
-#
-if test 1 = 2; then
-
-$as_echo "#define NO_SHARED_WRITING 1" >>confdefs.h
-fi
-
-## --------------------------------------------------------------------------
-## Should the Default Virtual File Driver be compiled?
+## ----------------------------------------------------------------------
+## Check if Direct I/O driver is enabled by --enable-direct-vfd
##
-{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for Default Virtual File Driver definition" >&5
-$as_echo_n "checking for Default Virtual File Driver definition... " >&6; }
+## Check these regardless. If the checks are moved inside the main
+## direct VFD block, the output is nested.
-# Check whether --with-default-vfd was given.
-if test "${with_default_vfd+set}" = set; then :
- withval=$with_default_vfd;
+if ${hdf5_cv_direct_io+:} false; then :
+ $as_echo_n "(cached) " >&6
+else
+ ac_fn_c_check_decl "$LINENO" "O_DIRECT" "ac_cv_have_decl_O_DIRECT" "#include <fcntl.h>
+"
+if test "x$ac_cv_have_decl_O_DIRECT" = xyes; then :
+ hdf5_cv_direct_io=yes
else
- withval=sec2
+ hdf5_cv_direct_io=no
fi
+fi
-if test "X$withval" = "Xsec2"; then
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
-$as_echo "yes" >&6; }
- default_vfd=yes
- vfd_define=H5FD_SEC2
-elif test "X$withval" = "Xstdio"; then
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
-$as_echo "yes" >&6; }
- default_vfd=yes
- vfd_define=H5FD_STDIO
+if ${hdf5_cv_posix_memalign+:} false; then :
+ $as_echo_n "(cached) " >&6
else
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
-$as_echo "no" >&6; }
- default_vfd=no
+ ac_fn_c_check_func "$LINENO" "posix_memalign" "ac_cv_func_posix_memalign"
+if test "x$ac_cv_func_posix_memalign" = xyes; then :
+ hdf5_cv_posix_memalign=yes
+else
+ hdf5_cv_posix_memalign=no
fi
-if test "X$default_vfd" = "Xyes"; then
-
-cat >>confdefs.h <<_ACEOF
-#define DEFAULT_VFD $vfd_define
-_ACEOF
-
fi
-## ----------------------------------------------------------------------
-## Check if Direct I/O driver is enabled by --enable-direct-vfd
-##
-{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for Direct Virtual File Driver support" >&5
-$as_echo_n "checking for Direct Virtual File Driver support... " >&6; }
+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if the direct I/O virtual file driver (VFD) is enabled" >&5
+$as_echo_n "checking if the direct I/O virtual file driver (VFD) is enabled... " >&6; }
# Check whether --enable-direct-vfd was given.
if test "${enable_direct_vfd+set}" = set; then :
enableval=$enable_direct_vfd; DIRECT_VFD=$enableval
else
- DIRECT_VFD=yes
-fi
-
-
-if test "$DIRECT_VFD" = "yes"; then
- if ${hdf5_cv_direct_io+:} false; then :
- $as_echo_n "(cached) " >&6
-else
- if test "$cross_compiling" = yes; then :
- { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
-$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
-as_fn_error $? "cannot run test program while cross compiling
-See \`config.log' for more details" "$LINENO" 5; }
-else
- cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-
- #include <sys/types.h>
- #include <sys/stat.h>
- #include <fcntl.h>
- int main(void)
- {
- int fid;
- if((fid=open("tst_file", O_CREAT | O_TRUNC | O_DIRECT, 0755))<0)
- exit(1);
- close(fid);
- remove("tst_file");
- exit (0);
- }
-_ACEOF
-if ac_fn_c_try_run "$LINENO"; then :
- cat confdefs.h - <<_ACEOF >conftest.$ac_ext
-/* end confdefs.h. */
-
-#ifdef FC_DUMMY_MAIN
-#ifndef FC_DUMMY_MAIN_EQ_F77
-# ifdef __cplusplus
- extern "C"
-# endif
- int FC_DUMMY_MAIN() { return 1; }
-#endif
-#endif
-int
-main ()
-{
-posix_memalign()
- ;
- return 0;
-}
-_ACEOF
-if ac_fn_c_try_link "$LINENO"; then :
- hdf5_cv_direct_io=yes
-else
- hdf5_cv_direct_io=no
-fi
-rm -f core conftest.err conftest.$ac_objext \
- conftest$ac_exeext conftest.$ac_ext
-else
- hdf5_cv_direct_io=no
-fi
-rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
- conftest.$ac_objext conftest.beam conftest.$ac_ext
-fi
-
+ DIRECT_VFD=no
fi
- if test ${hdf5_cv_direct_io} = "yes"; then
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
+if test "X$DIRECT_VFD" = "Xyes"; then
+ if test ${hdf5_cv_direct_io} = "yes" && test ${hdf5_cv_posix_memalign} = "yes" ; then
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
$as_echo "yes" >&6; }
$as_echo "#define HAVE_DIRECT 1" >>confdefs.h
- else
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+ else
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
$as_echo "no" >&6; }
- DIRECT_VFD=no
- fi
+ DIRECT_VFD=no
+ as_fn_error $? "The direct VFD was requested but cannot be built. This is either
+ due to O_DIRECT not being found in fcntl.h or a lack of
+ posix_memalign() on your system. Please re-configure without
+ specifying --enable-direct-vfd." "$LINENO" 5
+ fi
else
- { $as_echo "$as_me:${as_lineno-$LINENO}: result: suppressed" >&5
-$as_echo "suppressed" >&6; }
+ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
+$as_echo "no" >&6; }
fi
if test "X$DIRECT_VFD" = "Xyes"; then
@@ -30950,39 +29557,6 @@ if test -n "$AM_CPPFLAGS"; then
AM_CPPFLAGS=$TEMP_CPPFLAGS
fi
-## ----------------------------------------------------------------------
-## Check if they would like the High Level library compiled
-##
-
- HL=""
-## name of fortran folder inside "hl", if FORTRAN compile is requested
- HL_FOR=""
-{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if high level library is enabled" >&5
-$as_echo_n "checking if high level library is enabled... " >&6; }
-# Check whether --enable-hl was given.
-if test "${enable_hl+set}" = set; then :
- enableval=$enable_hl; HDF5_HL=$enableval
-else
- HDF5_HL=yes
-fi
-
-
-if test "X$HDF5_HL" = "Xyes"; then
- echo "yes"
- HL="hl"
-
-$as_echo "#define INCLUDE_HL 1" >>confdefs.h
-
-
-## Check if Fortran's default real is double precision. If it is and HL is being built then configure
-## should fail due to bug HDFFV-889.
- if test "X$FORTRAN_DEFAULT_REALisDBLE" = "Xyes"; then
- as_fn_error $? "Fortran high-level routines are not supported when the default REAL is DOUBLE PRECISION, use configure option --disable-hl." "$LINENO" 5
- fi
-else
- echo "no"
-fi
-
## ----------------------------------------------------------------------
## Some programs shouldn't be built by default (e.g., programs to generate
@@ -31732,7 +30306,7 @@ Usage: $0 [OPTIONS]
Report bugs to <bug-libtool@gnu.org>."
lt_cl_version="\
-HDF5 config.lt 1.9.212
+HDF5 config.lt 1.9.215
configured by $0, generated by GNU Autoconf 2.69.
Copyright (C) 2011 Free Software Foundation, Inc.
@@ -33874,7 +32448,7 @@ cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
# report actual input values of CONFIG_FILES etc. instead of their
# values after options handling.
ac_log="
-This file was extended by HDF5 $as_me 1.9.212, which was
+This file was extended by HDF5 $as_me 1.9.215, which was
generated by GNU Autoconf 2.69. Invocation command line was
CONFIG_FILES = $CONFIG_FILES
@@ -33940,7 +32514,7 @@ _ACEOF
cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`"
ac_cs_version="\\
-HDF5 config.status 1.9.212
+HDF5 config.status 1.9.215
configured by $0, generated by GNU Autoconf 2.69,
with options \\"\$ac_cs_config\\"
generated by cgit v0.12 at 2024-09-02 15:50:47 (GMT)