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+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by the Board of Trustees of the University of Illinois. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the files COPYING and Copyright.html. COPYING can be found at the root *
+ * of the source code distribution tree; Copyright.html can be found at the *
+ * root level of an installed copy of the electronic HDF5 document set and *
+ * is linked from the top-level documents page. It can also be found at *
+ * http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
+ * access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+/* This program demonstrates how to create and use "external links" in
+ * HDF5.
+ *
+ * External links point from one HDF5 file to an object (Group, Dataset, or
+ * committed Datatype) in another file.
+ */
+
+#include "hdf5.h"
+#include <string.h>
+
+#define SOURCE_FILE "extlink_source.h5"
+#define TARGET_FILE "extlink_target.h5"
+
+#define PREFIX_SOURCE_FILE "extlink_prefix_source.h5"
+
+#define SOFT_LINK_FILE "soft_link.h5"
+#define SOFT_LINK_NAME "soft_link_to_group"
+#define UD_SOFT_LINK_NAME "ud_soft_link"
+#define TARGET_GROUP "target_group"
+
+#define UD_SOFT_CLASS 65
+
+#define HARD_LINK_FILE "hard_link.h5"
+#define HARD_LINK_NAME "hard_link_to_group"
+#define UD_HARD_LINK_NAME "ud_hard_link"
+
+#define UD_HARD_CLASS 66
+
+#define PLIST_LINK_PROP "plist_link_prop"
+#define UD_PLIST_CLASS 66
+
+
+
+/* Basic external link example
+ *
+ * Creates two files and uses an external link to access an object in the
+ * second file from the first file.
+ */
+void extlink_example()
+{
+ hid_t source_file_id, targ_file_id;
+ hid_t group_id, group2_id;
+
+ /* Create two files, a source and a target */
+ source_file_id = H5Fcreate(SOURCE_FILE, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ targ_file_id = H5Fcreate(TARGET_FILE, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+
+ /* Create a group in the target file for the external link to point to. */
+ group_id = H5Gcreate(targ_file_id, "target_group", (size_t) 0);
+
+ /* Close the group and the target file */
+ H5Gclose(group_id);
+
+ /* Create an external link in the source file pointing to the target group.
+ * We could instead have created the external link first, then created the
+ * group it points to; the order doesn't matter.
+ */
+ H5Lcreate_external(TARGET_FILE, "target_group", source_file_id, "ext_link", H5P_DEFAULT, H5P_DEFAULT);
+
+ /* Now we can use the external link to create a new group inside the
+ * target group (even though the target file is closed!). The external
+ * link works just like a soft link.
+ */
+ group_id = H5Gcreate(source_file_id, "ext_link/new_group", (size_t) 0);
+
+ /* The group is inside the target file and we can access it normally.
+ * Here, group_id and group2_id point to the same group inside the
+ * target file.
+ */
+ group2_id = H5Gopen(targ_file_id, "target_group/new_group");
+
+ /* Don't forget to close the IDs we opened. */
+ H5Gclose(group2_id);
+ H5Gclose(group_id);
+
+ H5Fclose(targ_file_id);
+ H5Fclose(source_file_id);
+
+ /* The link from the source file to the target file will work as long as
+ * the target file can be found. If the target file is moved, renamed,
+ * or deleted in the filesystem, HDF5 won't be able to find it and the
+ * external link will "dangle."
+ */
+}
+
+
+/* External link prefix example
+ *
+ * Uses a group access property list to set a "prefix" for the filenames
+ * accessed through an external link.
+ *
+ * Group access property lists inherit from link access property lists;
+ * the external link prefix property is actually a property of LAPLs.
+ *
+ * This example requires a "red" directory and a "blue" directory to exist
+ * where it is run (so to run this example on Unix, first mkdir red and mkdir
+ * blue).
+ */
+void extlink_prefix_example()
+{
+ hid_t source_file_id, red_file_id, blue_file_id;
+ hid_t group_id, group2_id;
+ hid_t gapl_id;
+
+ /* Create three files, a source and two targets. The targets will have
+ * the same name, but one will be located in the red directory and one will
+ * be located in the blue directory */
+ source_file_id = H5Fcreate(PREFIX_SOURCE_FILE, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ red_file_id = H5Fcreate("red/prefix_target.h5", H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ blue_file_id = H5Fcreate("blue/prefix_target.h5", H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+
+ /* This test needs a red and a blue directory in the filesystem. If they're not present,
+ * trying to create the files above will fail.
+ */
+ if(red_file_id < 0 || blue_file_id < 0)
+ printf("This test requires directories named 'red' and 'blue' to exist. Did you forget to create them?\n");
+
+ /* Create an external link in the source file pointing to the root group of
+ * a file named prefix_target.h5. This file doesn't exist in the current
+ * directory, but the files in the red and blue directories both have this
+ * name.
+ */
+ H5Lcreate_external("prefix_target.h5", "/", source_file_id, "ext_link", H5P_DEFAULT, H5P_DEFAULT);
+
+ /* If we tried to traverse the external link now, we would fail (since the
+ * file it points to doesn't exist). Instead, we'll create a group access
+ * property list that will provide a prefix path to the external link.
+ * Group access property lists inherit the properties of link access
+ * property lists.
+ */
+ gapl_id = H5Pcreate(H5P_GROUP_ACCESS);
+ H5Pset_elink_prefix(gapl_id, "red/");
+
+ /* Now if we traverse the external link, HDF5 will look for an external
+ * file named red/prefix_target.h5, which exists.
+ * To pass the group access property list, we need to use H5Gopen_expand.
+ */
+ group_id = H5Gopen_expand(source_file_id, "ext_link", gapl_id);
+
+ /* Now we can use the open group ID to create a new group inside the
+ * "red" file.
+ */
+ group2_id = H5Gcreate(group_id, "pink", (size_t) 0);
+
+ /* Close both groups. */
+ H5Gclose(group2_id);
+ H5Gclose(group_id);
+
+ /* If we change the prefix, the same external link can find a file in the blue
+ * directory.
+ */
+ H5Pset_elink_prefix(gapl_id, "blue/");
+ group_id = H5Gopen_expand(source_file_id, "ext_link", gapl_id);
+ group2_id = H5Gcreate(group_id, "sky blue", (size_t) 0);
+
+ /* Close both groups. */
+ H5Gclose(group2_id);
+ H5Gclose(group_id);
+
+ /* Each file has had a group created inside it using the same external link. */
+ group_id = H5Gopen(red_file_id, "pink");
+ group2_id = H5Gopen(blue_file_id, "sky blue");
+
+ /* Clean up our open IDs */
+ H5Gclose(group2_id);
+ H5Gclose(group_id);
+ H5Pclose(gapl_id);
+ H5Fclose(blue_file_id);
+ H5Fclose(red_file_id);
+ H5Fclose(source_file_id);
+
+ /* User-defined links can expand on the ability to pass in parameters
+ * using an access property list; for instance, a user-defined link
+ * might function like an external link but allow the full filename to be
+ * passed in through the access property list.
+ */
+}
+
+
+/* Soft Link example
+ *
+ * Create a new class of user-defined links that behave like HDF5's built-in
+ * soft links.
+ *
+ * This isn't very useful by itself (HDF5's soft links already do the same
+ * thing), but it can serve as an example for how to reference objects by
+ * name.
+ */
+
+/* We need to define the callback function that the soft link will use.
+ * It is defined after the example below.
+ * To keep the example simple, these links don't have a query callback.
+ * In general, link classes should always be query-able.
+ * We might also have wanted to supply a creation callback that checks
+ * that a path was supplied in the udata.
+ */
+static hid_t UD_soft_traverse(const char *link_name, hid_t cur_group, void *udata, size_t udata_size, hid_t lapl_id);
+
+void soft_link_example()
+{
+ hid_t file_id;
+ hid_t group_id;
+ /* Define the link class that we'll use to register "user-defined hard
+ * links" using the callbacks we defined above.
+ * A link class can have NULL for any callback except its traverse
+ * callback.
+ */
+ const H5L_link_class_t UD_soft_class[1] = {{
+ H5L_LINK_CLASS_T_VERS, /* Version number for this struct.
+ * This field is always H5L_LINK_CLASS_T_VERS */
+ UD_SOFT_CLASS, /* Link class id number. This can be any
+ * value between H5L_LINK_UD_MIN (64) and
+ * H5L_LINK_MAX (255). It should be a
+ * value that isn't already being used by
+ * another kind of link. We'll use 65. */
+ "UD_soft_link", /* Link class name for debugging */
+ NULL, /* Creation callback */
+ NULL, /* Move callback */
+ NULL, /* Copy callback */
+ UD_soft_traverse, /* The actual traversal function */
+ NULL, /* Deletion callback */
+ NULL /* Query callback */
+ }};
+
+
+ /* First, create a file and an object within the file for the link to
+ * point to.
+ */
+ file_id = H5Fcreate(SOFT_LINK_FILE, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ group_id = H5Gcreate(file_id, TARGET_GROUP, (size_t) 0);
+ H5Gclose(group_id);
+
+ /* This is how we create a normal soft link to the group.
+ */
+ H5Lcreate_soft(TARGET_GROUP, file_id, SOFT_LINK_NAME, H5P_DEFAULT, H5P_DEFAULT);
+
+ /* To do the same thing using a user-defined link, we first have to
+ * register the link class we defined.
+ */
+ H5Lregister(UD_soft_class);
+
+ /* Now create a user-defined link. We give it the path to the group
+ * as its udata.1
+ */
+ H5Lcreate_ud(file_id, UD_SOFT_LINK_NAME, UD_SOFT_CLASS, TARGET_GROUP,
+ strlen(TARGET_GROUP) + 1, H5P_DEFAULT, H5P_DEFAULT);
+
+ /* We can access the group through the UD soft link like we would through
+ * a normal soft link. This link will still dangle if the object's
+ * original name is changed or unlinked.
+ */
+ group_id = H5Gopen(file_id, UD_SOFT_LINK_NAME);
+
+ /* The group is now open normally. Don't forget to close it! */
+ H5Gclose(group_id);
+
+ H5Fclose(file_id);
+}
+
+/* UD_soft_traverse
+ * The actual traversal function simply needs to open the correct object by
+ * name and return its ID.
+ */
+static hid_t UD_soft_traverse(const char *link_name, hid_t cur_group, void *udata, size_t udata_size, hid_t lapl_id)
+{
+ const char *target = (char *) udata;
+ hid_t ret_value;
+
+ /* Pass the udata straight through to HDF5. If it's invalid, let HDF5
+ * return an error.
+ */
+ ret_value = H5Oopen(cur_group, target, lapl_id);
+ return ret_value;
+}
+
+
+
+/* Hard Link example
+ *
+ * Create a new class of user-defined links that behave like HDF5's built-in
+ * hard links.
+ *
+ * This isn't very useful by itself (HDF5's hard links already do the same
+ * thing), but it can serve as an example for how to reference objects by
+ * address.
+ */
+
+/* We need to define the callback functions that the hard link will use.
+ * These are defined after the example below.
+ * To keep the example simple, these links don't have a query callback.
+ * Generally, real link classes should always be query-able.
+ */
+static herr_t UD_hard_create(const char *link_name, hid_t loc_group, void *udata, size_t udata_size, hid_t lcpl_id);
+static herr_t UD_hard_delete(const char *link_name, hid_t loc_group, void *udata, size_t udata_size);
+static hid_t UD_hard_traverse(const char *link_name, hid_t cur_group, void *udata, size_t udata_size, hid_t lapl_id);
+
+void hard_link_example()
+{
+ hid_t file_id;
+ hid_t group_id;
+ H5L_linkinfo_t li;
+ /* Define the link class that we'll use to register "user-defined hard
+ * links" using the callbacks we defined above.
+ * A link class can have NULL for any callback except its traverse
+ * callback.
+ */
+ const H5L_link_class_t UD_hard_class[1] = {{
+ H5L_LINK_CLASS_T_VERS, /* Version number for this struct.
+ * This field is always H5L_LINK_CLASS_T_VERS */
+ UD_HARD_CLASS, /* Link class id number. This can be any
+ * value between H5L_LINK_UD_MIN (64) and
+ * H5L_LINK_MAX (255). It should be a
+ * value that isn't already being used by
+ * another kind of link. We'll use 66. */
+ "UD_hard_link", /* Link class name for debugging */
+ UD_hard_create, /* Creation callback */
+ NULL, /* Move callback */
+ NULL, /* Copy callback */
+ UD_hard_traverse, /* The actual traversal function */
+ UD_hard_delete, /* Deletion callback */
+ NULL /* Query callback */
+ }};
+
+
+ /* First, create a file and an object within the file for the link to
+ * point to.
+ */
+ file_id = H5Fcreate(HARD_LINK_FILE, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ group_id = H5Gcreate(file_id, TARGET_GROUP, (size_t) 0);
+ H5Gclose(group_id);
+
+ /* This is how we create a normal hard link to the group. This
+ * creates a second "name" for the group.
+ */
+ H5Lcreate_hard(file_id, TARGET_GROUP, file_id, HARD_LINK_NAME, H5P_DEFAULT, H5P_DEFAULT);
+
+ /* To do the same thing using a user-defined link, we first have to
+ * register the link class we defined.
+ */
+ H5Lregister(UD_hard_class);
+
+ /* Since hard links link by object address, we'll need to retrieve
+ * the target group's address. We do this by calling H5Lget_linkinfo
+ * on a hard link to the object.
+ */
+ H5Lget_linkinfo(file_id, TARGET_GROUP, &li, H5P_DEFAULT);
+
+ /* Now create a user-defined link. We give it the group's address
+ * as its udata.
+ */
+ H5Lcreate_ud(file_id, UD_HARD_LINK_NAME, UD_HARD_CLASS, &(li.u.address),
+ sizeof(li.u.address), H5P_DEFAULT, H5P_DEFAULT);
+
+ /* The UD hard link has now incremented the group's reference count
+ * like a normal hard link would. This means that we can unlink the
+ * other two links to that group and it won't be deleted until the
+ * UD hard link is deleted.
+ */
+ H5Lunlink(file_id, TARGET_GROUP, H5P_DEFAULT);
+ H5Lunlink(file_id, HARD_LINK_NAME, H5P_DEFAULT);
+
+ /* The group is still accessible through the UD hard link. If this were
+ * a soft link instead, the object would have been deleted when the last
+ * hard link to it was unlinked. */
+ group_id = H5Gopen(file_id, UD_HARD_LINK_NAME);
+
+ /* The group is now open normally. Don't forget to close it! */
+ H5Gclose(group_id);
+
+ /* Removing the user-defined hard link will delete the group. */
+ H5Lunlink(file_id, UD_HARD_LINK_NAME, H5P_DEFAULT);
+
+ H5Fclose(file_id);
+}
+
+/* Callbacks for User-defined hard links. */
+/* UD_hard_create
+ * The most important thing this callback does is to increment the reference
+ * count on the target object. Without this step, the object could be
+ * deleted while this link still pointed to it, resulting in possible data
+ * corruption!
+ * The create callback also checks the arguments used to create this link.
+ * If this function returns a negative value, the call to H5Lcreate_ud()
+ * will also return failure and the link will not be created.
+ */
+static herr_t UD_hard_create(const char *link_name, hid_t loc_group, void *udata, size_t udata_size, hid_t lcpl_id)
+{
+ haddr_t addr;
+ hid_t target_obj = -1;
+ herr_t ret_value = 0;
+
+ /* Make sure that the address passed in looks valid */
+ if(udata_size != sizeof(haddr_t))
+ {
+ ret_value = -1;
+ goto done;
+ }
+
+ addr = *((haddr_t *) udata);
+
+ /* Open the object this link points to so that we can increment
+ * its reference count. This also ensures that the address passed
+ * in points to a real object (although this check is not perfect!) */
+ target_obj= H5Oopen_by_addr(loc_group, addr);
+ if(target_obj < 0)
+ {
+ ret_value = -1;
+ goto done;
+ }
+
+ /* Increment the reference count of the target object */
+ if(H5Oincr_refcount(target_obj) < 0)
+ {
+ ret_value = -1;
+ goto done;
+ }
+
+done:
+ /* Close the target object if we opened it */
+ if(target_obj >= 0)
+ H5Oclose(target_obj);
+ return ret_value;
+}
+
+/* UD_hard_delete
+ * Since the creation function increments the object's reference count, it's
+ * important to decrement it again when the link is deleted.
+ */
+static herr_t UD_hard_delete(const char *link_name, hid_t loc_group, void *udata, size_t udata_size)
+{
+ haddr_t addr;
+ hid_t target_obj = -1;
+ herr_t ret_value = 0;
+
+ /* Sanity check; we have already verified the udata's size in the creation
+ * callback.
+ */
+ if(udata_size != sizeof(haddr_t))
+ {
+ ret_value = -1;
+ goto done;
+ }
+
+ addr = *((haddr_t *) udata);
+
+ /* Open the object this link points to */
+ target_obj= H5Oopen_by_addr(loc_group, addr);
+ if(target_obj < 0)
+ {
+ ret_value = -1;
+ goto done;
+ }
+
+ /* Decrement the reference count of the target object */
+ if(H5Odecr_refcount(target_obj) < 0)
+ {
+ ret_value = -1;
+ goto done;
+ }
+
+done:
+ /* Close the target object if we opened it */
+ if(target_obj >= 0)
+ H5Oclose(target_obj);
+ return ret_value;
+}
+
+/* UD_hard_traverse
+ * The actual traversal function simply needs to open the correct object and
+ * return its ID.
+ */
+static hid_t UD_hard_traverse(const char *link_name, hid_t cur_group, void * udata, size_t udata_size, hid_t lapl_id)
+{
+ haddr_t addr;
+ hid_t ret_value = -1;
+
+ /* Sanity check; we have already verified the udata's size in the creation
+ * callback.
+ */
+ if(udata_size != sizeof(haddr_t))
+ return -1;
+
+ addr = *((haddr_t *) udata);
+
+ /* Open the object by address. If H5Oopen_by_addr fails, ret_value will
+ * be negative to indicate that the traversal function failed.
+ */
+ ret_value = H5Oopen_by_addr(cur_group, addr);
+
+ return ret_value;
+}
+
+
+
+/* Plist example
+ *
+ * Create a new class of user-defined links that open objects within a file
+ * based on a value passed in through a link access property list.
+ *
+ * Group, dataset, and datatype access property lists all inherit from link
+ * access property lists, so they can be used instead of LAPLs.
+ */
+
+/* We need to define the callback functions that this link type will use.
+ * These are defined after the example below.
+ * These links have no udata, so they don't need a query function.
+ */
+static hid_t UD_plist_traverse(const char *link_name, hid_t cur_group, void *udata, size_t udata_size, hid_t lapl_id);
+
+void plist_link_example()
+{
+ hid_t file_id;
+ hid_t group_id, group2_id;
+ hid_t gapl_id;
+ char *path = NULL;
+
+ /* Define the link class that we'll use to register "plist
+ * links" using the callback we defined above.
+ * A link class can have NULL for any callback except its traverse
+ * callback.
+ */
+ const H5L_link_class_t UD_plist_class[1] = {{
+ H5L_LINK_CLASS_T_VERS, /* Version number for this struct.
+ * This field is always H5L_LINK_CLASS_T_VERS */
+ UD_PLIST_CLASS, /* Link class id number. This can be any
+ * value between H5L_LINK_UD_MIN (64) and
+ * H5L_LINK_MAX (255). It should be a
+ * value that isn't already being used by
+ * another kind of link. We'll use 67. */
+ "UD_plist_link", /* Link class name for debugging */
+ NULL, /* Creation callback */
+ NULL, /* Move callback */
+ NULL, /* Copy callback */
+ UD_plist_traverse, /* The actual traversal function */
+ NULL, /* Deletion callback */
+ NULL /* Query callback */
+ }};
+
+
+ /* First, create a file and two objects within the file for the link to
+ * point to.
+ */
+ file_id = H5Fcreate(HARD_LINK_FILE, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ group_id = H5Gcreate(file_id, "group_1", (size_t) 0);
+ H5Gclose(group_id);
+ group_id = H5Gcreate(file_id, "group_1/group_2", (size_t) 0);
+ H5Gclose(group_id);
+
+ /* Register "plist links" and create one. It has no udata at all. */
+ H5Lregister(UD_plist_class);
+ H5Lcreate_ud(file_id, "plist_link", UD_PLIST_CLASS, NULL, 0,
+ H5P_DEFAULT, H5P_DEFAULT);
+
+ /* Create a group access property list to pass in the target for the
+ * plist link.
+ */
+ gapl_id = H5Pcreate(H5P_GROUP_ACCESS);
+
+ /* There is no HDF5 API for setting the property that controls these
+ * links, so we have to add the property manually
+ */
+ H5Pinsert(gapl_id, PLIST_LINK_PROP, sizeof(const char *), &(path), NULL, NULL, NULL, NULL, NULL, NULL);
+
+ /* Set the property to point to the first group. */
+ path = "group_1";
+ H5Pset(gapl_id, PLIST_LINK_PROP, &path);
+
+ /* Open the first group through the plist link using the GAPL we just
+ * created */
+ group_id = H5Gopen_expand(file_id, "plist_link", gapl_id);
+
+ /* If we change the value set on the property list, it will change where
+ * the plist link points.
+ */
+ path = "group_1/group_2";
+ H5Pset(gapl_id, PLIST_LINK_PROP, &path);
+ group2_id = H5Gopen_expand(file_id, "plist_link", gapl_id);
+
+ /* group_id points to group_1 and group2_id points to group_2, both opened
+ * through the same link.
+ * Using more than one of this type of link could quickly become confusing,
+ * since they will all use the same property list; however, there is
+ * nothing to prevent the links from changing the property list in their
+ * traverse callbacks.
+ */
+
+ /* Clean up */
+ H5Pclose(gapl_id);
+ H5Gclose(group_id);
+ H5Gclose(group2_id);
+ H5Fclose(file_id);
+}
+
+/* Traversal callback for User-defined plist links. */
+/* UD_plist_traverse
+ * Open a path passed in through the property list.
+ */
+static hid_t UD_plist_traverse(const char *link_name, hid_t cur_group, void * udata, size_t udata_size, hid_t lapl_id)
+{
+ char * path;
+ hid_t ret_value = -1;
+
+ /* If the link property isn't set or can't be found, traversal fails. */
+ if(H5Pexist(lapl_id, PLIST_LINK_PROP) < 0)
+ goto error;
+
+ if(H5Pget(lapl_id, PLIST_LINK_PROP, &path) < 0)
+ goto error;
+
+ /* Open the object by address. If H5Oopen_by_addr fails, ret_value will
+ * be negative to indicate that the traversal function failed.
+ */
+ ret_value = H5Oopen(cur_group, path, lapl_id);
+
+ return ret_value;
+
+error:
+ return -1;
+}
+
+
+
+/* Main function
+ *
+ * Invokes the example functions.
+ */
+ int
+main(void)
+{
+ printf("Testing basic external links.\n");
+ extlink_example();
+
+ printf("Testing external link prefixes.\n");
+ extlink_prefix_example();
+
+ printf("Testing user-defined soft links.\n");
+ soft_link_example();
+
+ printf("Testing user-defined hard links.\n");
+ hard_link_example();
+
+ printf("Testing user-defined property list links.\n");
+ plist_link_example();
+
+ return 0;
+}
+
+